The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP047184	Rathayibacter sp. VKM Ac-2801 plasmid unnamed, complete sequence	50818	0	8735	50818		Mycobacterium_phage(100.0%)	10	NA	NA
WP_104268929.1|226_430_-	hypothetical protein	NA	NA	NA	NA	NA
WP_056865924.1|1177_1723_+	hypothetical protein	NA	NA	NA	NA	NA
WP_056865923.1|1874_2384_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_159917243.1|2380_3091_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159917245.1|3159_3618_+	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
WP_055794434.1|3684_4254_-	uracil-DNA glycosylase	NA	NA	NA	NA	NA
WP_043278972.1|4269_5430_-	TDT family transporter	NA	NA	NA	NA	NA
WP_020624524.1|5499_6405_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_056045796.1|6845_7268_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159424188.1|7337_8735_-	ParB/RepB/Spo0J family partition protein	NA	S5YZ97	Mycobacterium_phage	36.7	2.0e-57
>prophage 2
NZ_CP047184	Rathayibacter sp. VKM Ac-2801 plasmid unnamed, complete sequence	50818	13549	16232	50818		Cronobacter_phage(66.67%)	3	NA	NA
WP_104353510.1|13549_14845_-	Y-family DNA polymerase	NA	F1C5A5	Cronobacter_phage	39.4	1.0e-71
WP_104277457.1|14834_15284_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	F1C5A6	Cronobacter_phage	50.0	8.5e-26
WP_104277458.1|15473_16232_+	ParA family protein	NA	A0A2H4JGZ2	uncultured_Caudovirales_phage	58.1	6.3e-05
>prophage 3
NZ_CP047184	Rathayibacter sp. VKM Ac-2801 plasmid unnamed, complete sequence	50818	20734	21874	50818		Mycobacterium_phage(100.0%)	1	NA	NA
WP_159424211.1|20734_21874_+	hypothetical protein	NA	V5UQR9	Mycobacterium_phage	39.3	1.9e-13
>prophage 4
NZ_CP047184	Rathayibacter sp. VKM Ac-2801 plasmid unnamed, complete sequence	50818	37201	41639	50818		Aeromonas_phage(33.33%)	6	NA	NA
WP_104305026.1|37201_37822_-	recombinase family protein	NA	A0A219Y9V9	Aeromonas_phage	39.4	1.3e-24
WP_159917259.1|38034_38427_-	low molecular weight phosphatase family protein	NA	NA	NA	NA	NA
WP_159917261.1|38423_39809_-	FAD-dependent oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.9	4.7e-06
WP_159917283.1|39826_40582_-	aquaporin family protein	NA	NA	NA	NA	NA
WP_159917263.1|40619_41288_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_055794488.1|41288_41639_-	helix-turn-helix transcriptional regulator	NA	A0A218MNF3	uncultured_virus	40.0	1.4e-07
>prophage 5
NZ_CP047184	Rathayibacter sp. VKM Ac-2801 plasmid unnamed, complete sequence	50818	45915	50499	50818		Aeromonas_phage(33.33%)	9	NA	NA
WP_159917273.1|45915_46512_+	recombinase family protein	NA	A0A219YB42	Aeromonas_phage	46.7	1.0e-34
WP_159917275.1|46708_47332_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159917285.1|47448_48153_+	SOS response-associated peptidase	NA	V9IQW7	Stenotrophomonas_phage	41.0	7.3e-32
WP_159917277.1|48157_48733_+	hypothetical protein	NA	NA	NA	NA	NA
WP_104277726.1|48786_49035_+	hypothetical protein	NA	NA	NA	NA	NA
WP_159917279.1|49157_49316_+	hypothetical protein	NA	NA	NA	NA	NA
WP_104282270.1|49320_49530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_104305048.1|49540_50272_-	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_104268997.1|50268_50499_-	glutaredoxin-like protein NrdH	NA	A0A218MND6	uncultured_virus	45.1	4.0e-11
