The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP047307	Citrobacter freundii strain L75 chromosome, complete genome	5125834	791152	833303	5125834	transposase,plate	Salmonella_phage(33.33%)	31	NA	NA
WP_044713759.1|791152_791578_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_071684650.1|791580_793416_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_071684649.1|793382_794429_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_071684678.1|794445_795744_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_071684648.1|795740_796274_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_159359331.1|796276_797620_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_044713767.1|797624_798434_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_071684647.1|798442_801178_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	31.4	9.1e-86
WP_071684646.1|801174_801930_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
WP_071684645.1|801934_803356_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_071684644.1|803379_806904_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_044713776.1|806914_808282_+	membrane protein	NA	NA	NA	NA	NA
WP_044713777.1|808284_808764_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_159359332.1|808964_809822_-	hypothetical protein	NA	NA	NA	NA	NA
WP_038917748.1|811411_811705_+	DUF1778 domain-containing protein	NA	NA	NA	NA	NA
WP_057108449.1|811701_812190_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_064388374.1|812282_813386_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057108451.1|814721_816131_+	type I restriction-modification system subunit M	NA	NA	NA	NA	NA
WP_057108452.1|816217_817747_+	hypothetical protein	NA	F2Y1N5	Organic_Lake_phycodnavirus	26.1	1.5e-05
WP_057108453.1|817743_819342_+	restriction system-associated AAA family ATPase	NA	NA	NA	NA	NA
WP_057108454.1|819341_820427_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088169078.1|821067_822274_+|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	63.1	4.0e-102
WP_057108457.1|823175_823391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064388615.1|823993_824602_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_064388613.1|824598_825750_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_064388612.1|825746_826952_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_064388610.1|826953_827664_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.8	2.8e-31
WP_064388621.1|827692_828166_+	cytochrome c	NA	NA	NA	NA	NA
WP_064388608.1|828152_829640_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_064388619.1|829770_830328_+	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	80.5	7.5e-48
WP_064388606.1|830330_833303_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	71.9	0.0e+00
>prophage 2
NZ_CP047307	Citrobacter freundii strain L75 chromosome, complete genome	5125834	1275395	1282730	5125834		Enterobacteria_phage(66.67%)	9	NA	NA
WP_081366019.1|1275395_1275686_-	hypothetical protein	NA	A0A1V0E8G8	Vibrio_phage	50.0	2.8e-06
WP_001592532.1|1275988_1276489_-	hypothetical protein	NA	A0A2H4J2P5	uncultured_Caudovirales_phage	61.3	8.9e-40
WP_159359341.1|1276930_1279264_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	84.7	0.0e+00
WP_000743144.1|1279278_1279599_-	DUF5375 domain-containing protein	NA	NA	NA	NA	NA
WP_137377536.1|1279595_1279823_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159359342.1|1279819_1280371_-	host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	61.2	8.0e-26
WP_061357474.1|1281161_1281905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000468229.1|1281908_1282148_+	hypothetical protein	NA	Q7M294	Enterobacteria_phage	61.7	1.7e-20
WP_159359343.1|1282163_1282730_+	Polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	64.9	1.5e-59
>prophage 3
NZ_CP047307	Citrobacter freundii strain L75 chromosome, complete genome	5125834	1835152	1843571	5125834	tRNA	Enterobacteria_phage(66.67%)	9	NA	NA
WP_071685240.1|1835152_1836100_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	26.1	2.6e-08
WP_071685241.1|1836083_1836815_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_003027354.1|1836795_1836903_-	protein YohO	NA	NA	NA	NA	NA
WP_003844381.1|1836954_1837686_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	93.5	1.8e-105
WP_003027348.1|1837911_1839597_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.6	6.7e-281
WP_003840155.1|1839593_1840313_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_071685280.1|1840359_1840830_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	76.3	2.4e-63
WP_003840158.1|1840872_1841331_-	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	68.0	5.1e-50
WP_060854718.1|1841537_1843571_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	4.0e-54
>prophage 4
NZ_CP047307	Citrobacter freundii strain L75 chromosome, complete genome	5125834	1881717	1891295	5125834	protease,tRNA	Bacillus_phage(28.57%)	8	NA	NA
WP_003036815.1|1881717_1883664_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	41.3	1.6e-39
WP_003036813.1|1883738_1883963_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.7	3.6e-17
WP_003036810.1|1884286_1884607_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	3.5e-13
WP_003036804.1|1884637_1886914_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.1	1.4e-164
WP_071685250.1|1887183_1888545_-|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	92.6	7.7e-203
WP_003841759.1|1888704_1889037_-	YegP family protein	NA	NA	NA	NA	NA
WP_003036797.1|1889172_1889895_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	32.7	9.2e-30
WP_003844344.1|1889891_1891295_-	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	29.2	5.0e-32
>prophage 5
NZ_CP047307	Citrobacter freundii strain L75 chromosome, complete genome	5125834	2786068	2847936	5125834	head,tRNA,tail,integrase,lysis,transposase,terminase	Enterobacteria_phage(25.35%)	85	2799685:2799707	2848117:2848139
WP_003836641.1|2786068_2786848_+	heme ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	26.7	7.9e-11
WP_003843460.1|2786844_2788287_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	35.3	7.7e-52
WP_003836643.1|2788348_2789062_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_003836644.1|2789378_2789843_-	lipoprotein nlpC	NA	A0A1V0DZX6	Clostridioides_phage	38.2	3.5e-14
WP_003030567.1|2789920_2790670_-	vitamin B12 ABC transporter ATP-binding protein BtuD	NA	A0A2R8FG22	Brazilian_cedratvirus	30.3	9.3e-09
WP_003030569.1|2790669_2791221_-	glutathione peroxidase	NA	NA	NA	NA	NA
WP_003832584.1|2791281_2792262_-	vitamin B12 ABC transporter permease BtuC	NA	A0A2H4IY97	uncultured_Caudovirales_phage	24.8	6.7e-15
WP_003030571.1|2792415_2792715_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	40.0	7.2e-13
WP_003030574.1|2792719_2795107_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_003832580.1|2795122_2796106_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	38.5	1.4e-33
WP_152659856.1|2796305_2796437_-	pheST operon leader peptide PheM	NA	NA	NA	NA	NA
WP_003030578.1|2796475_2796832_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003030583.1|2796887_2797085_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_048997935.1|2797181_2797724_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	32.9	8.2e-15
WP_003832572.1|2797727_2799656_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.8	4.4e-127
2799685:2799707	attL	ACACGTAAGATCACATACAAAGA	NA	NA	NA	NA
WP_001752311.1|2800680_2801712_+|transposase	IS630-like element ISEc33 family transposase	transposase	NA	NA	NA	NA
WP_159359380.1|2801727_2801970_-	hypothetical protein	NA	H6WRU9	Salmonella_phage	54.8	1.1e-16
WP_159359438.1|2802037_2802748_-	hypothetical protein	NA	H6WRU8	Salmonella_phage	44.2	6.0e-42
WP_159359381.1|2802734_2802902_-	Arc family DNA-binding protein	NA	G9L6D7	Escherichia_phage	70.9	7.3e-15
WP_047500852.1|2803027_2803483_+	Arc family DNA-binding protein	NA	G9L6D6	Escherichia_phage	53.6	1.0e-26
WP_159359382.1|2803634_2805596_+	acyltransferase family protein	NA	A0A193GZ69	Enterobacter_phage	33.8	3.2e-77
WP_159359383.1|2807929_2810407_-	MoaD/ThiS family protein	NA	F1C5A7	Cronobacter_phage	87.9	0.0e+00
WP_159359439.1|2810393_2810759_-	peptidoglycan endopeptidase	NA	F1C5F2	Cronobacter_phage	89.9	5.4e-63
WP_096218619.1|2810772_2811243_-	hypothetical protein	NA	F1C5F1	Cronobacter_phage	92.9	1.2e-78
WP_159359384.1|2811242_2811740_-	hypothetical protein	NA	F1C5F0	Cronobacter_phage	90.3	1.0e-88
WP_159359385.1|2811739_2814676_-|tail	tail protein (tape measure)	tail	B1GS57	Salmonella_phage	50.6	5.3e-108
WP_071685493.1|2814688_2815366_-	hypothetical protein	NA	G0ZNE7	Cronobacter_phage	49.1	2.9e-54
WP_071685492.1|2815423_2816167_-	DNA breaking-rejoining protein	NA	F1C5E5	Cronobacter_phage	84.6	2.6e-72
WP_109908296.1|2816231_2816615_-	hypothetical protein	NA	F1C5E4	Cronobacter_phage	66.1	7.2e-42
WP_109908295.1|2816611_2817052_-	hypothetical protein	NA	A0A1V0E5P5	Salmonella_phage	52.6	3.5e-32
WP_071685489.1|2817054_2817405_-	hypothetical protein	NA	G0ZNE2	Cronobacter_phage	66.1	2.0e-38
WP_057064516.1|2817401_2817641_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057064517.1|2817633_2817807_-	hypothetical protein	NA	I6R0P9	Salmonella_phage	46.4	9.6e-10
WP_071685488.1|2817806_2818208_-	hypothetical protein	NA	G0ZNE1	Cronobacter_phage	78.2	7.8e-55
WP_057064519.1|2818270_2818564_-	hypothetical protein	NA	A0A1V0E5P8	Salmonella_phage	88.7	9.4e-42
WP_057064520.1|2818573_2819650_-	hypothetical protein	NA	Q5G8Y0	Enterobacteria_phage	91.6	1.5e-190
WP_159359386.1|2819667_2820117_-	hypothetical protein	NA	H6WRT3	Salmonella_phage	84.6	3.5e-64
WP_071697815.1|2820129_2821395_-	hypothetical protein	NA	Q5G8Y2	Enterobacteria_phage	90.3	1.0e-217
WP_071697814.1|2821397_2822324_-|head	phage head morphogenesis protein	head	A0A1V0E5Q2	Salmonella_phage	92.2	5.8e-162
WP_071697813.1|2822283_2823633_-	DUF1073 domain-containing protein	NA	Q5G8Y4	Enterobacteria_phage	86.4	3.0e-231
WP_071697812.1|2823648_2824896_-|terminase	terminase	terminase	I6RSK1	Salmonella_phage	96.7	1.5e-213
WP_109908294.1|2824892_2825348_-	DUF2280 domain-containing protein	NA	I6S1P9	Salmonella_phage	98.7	7.5e-78
WP_109908293.1|2825380_2826019_-	hypothetical protein	NA	I6S676	Salmonella_phage	92.9	6.3e-115
WP_109908292.1|2826101_2826377_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109908291.1|2826461_2826653_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063961213.1|2826808_2827327_-	Rha family transcriptional regulator	NA	Q38450	Enterobacteria_phage	98.3	9.4e-93
WP_063137394.1|2827505_2827970_-|lysis	lysis protein	lysis	M9NYX9	Enterobacteria_phage	64.3	9.4e-44
WP_017383026.1|2827966_2828497_-	lysozyme	NA	I6PBN2	Cronobacter_phage	63.3	2.6e-50
WP_017383027.1|2828474_2828795_-	hypothetical protein	NA	H6WRZ3	Salmonella_phage	85.9	1.1e-40
WP_159359387.1|2829058_2829565_-	hypothetical protein	NA	A0A2D2W6Q0	Pectobacterium_phage	34.6	9.0e-16
WP_159359388.1|2829806_2830496_-	antiterminator	NA	I6PDF8	Cronobacter_phage	51.3	3.9e-54
WP_159359389.1|2830495_2830633_-	YlcG family protein	NA	H6WRZ0	Salmonella_phage	78.9	9.2e-08
WP_088732242.1|2830629_2830992_-	RusA family crossover junction endodeoxyribonuclease	NA	K7PM48	Enterobacteria_phage	81.7	2.5e-52
WP_096218531.1|2830988_2831279_-	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	90.6	6.9e-45
WP_063854148.1|2831271_2831442_-	NinE family protein	NA	K7P7K0	Enterobacteria_phage	92.5	5.9e-20
WP_039024849.1|2831441_2831897_-	hypothetical protein	NA	K7P7B8	Enterobacteria_phage	97.4	9.1e-84
WP_159359390.1|2832057_2832795_-	hypothetical protein	NA	A0A0K1YAE4	Cronobacter_phage	38.3	1.1e-22
WP_159359391.1|2832791_2833544_-	DUF551 domain-containing protein	NA	K7P7E4	Enterobacteria_phage	36.8	1.6e-29
WP_151564544.1|2833547_2833736_-	diguanylate phosphodiesterase	NA	A0A192Y8X2	Salmonella_phage	95.2	1.5e-24
WP_159359392.1|2834091_2834271_-	hypothetical protein	NA	NA	NA	NA	NA
WP_159359393.1|2834267_2834630_-	hypothetical protein	NA	G9L6B1	Escherichia_phage	81.2	2.3e-13
WP_159359394.1|2834626_2834926_-	protein ren	NA	M1FPD5	Enterobacteria_phage	51.6	1.1e-16
WP_159359395.1|2834922_2835702_-	replication protein	NA	A0A193GYX1	Enterobacter_phage	64.2	1.2e-94
WP_159359440.1|2835698_2836427_-	HTH domain-containing protein	NA	H9C164	Pectobacterium_phage	63.6	4.3e-35
WP_159359396.1|2836560_2837103_-	regulator	NA	M9NZI6	Enterobacteria_phage	78.3	1.3e-73
WP_040117293.1|2837132_2837360_-	helix-turn-helix domain-containing protein	NA	Q76H55	Enterobacteria_phage	70.4	1.5e-23
WP_045355023.1|2837471_2838176_+	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	79.1	2.7e-103
WP_159359397.1|2838212_2838698_+	lipoprotein	NA	NA	NA	NA	NA
WP_159359398.1|2839118_2839460_+	hypothetical protein	NA	G8C7T6	Escherichia_phage	95.6	5.1e-55
WP_104652169.1|2839593_2839890_+	regulator	NA	M9P0E2	Enterobacteria_phage	86.7	1.6e-41
WP_049041165.1|2839989_2840238_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001752704.1|2840389_2840596_+	cell division protein FtsZ	NA	G8C7T2	Escherichia_phage	100.0	3.6e-32
WP_109908282.1|2840672_2841644_+	hypothetical protein	NA	A0A077KCC0	Edwardsiella_phage	76.3	3.8e-39
WP_109908281.1|2841651_2841936_+	host nuclease inhibitor GamL	NA	G8C7T1	Escherichia_phage	88.3	3.0e-45
WP_109908280.1|2841954_2842800_+	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	61.2	6.2e-70
WP_109908279.1|2842796_2843477_+	YqaJ viral recombinase family protein	NA	M9NZE1	Enterobacteria_phage	93.4	4.2e-125
WP_109908278.1|2843467_2843629_+	DUF1317 family protein	NA	M1FJ61	Enterobacteria_phage	69.8	1.2e-14
WP_109908277.1|2843625_2844177_+	phage N-6-adenine-methyltransferase	NA	E5AGF8	Erwinia_phage	58.3	1.1e-54
WP_048232207.1|2844173_2844392_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109908276.1|2844489_2844711_+	TraR/DksA family transcriptional regulator	NA	A0A0N7C211	Escherichia_phage	47.1	6.5e-11
WP_071685470.1|2844707_2845427_+	DNA cytosine methyltransferase	NA	Q6UAU0	Klebsiella_phage	70.2	2.4e-94
WP_159359399.1|2845389_2845629_+	DUF4222 domain-containing protein	NA	Q6H9Z8	Enterobacteria_phage	50.0	2.9e-12
WP_159359400.1|2845678_2846431_+	methyltransferase	NA	M4M9L8	Vibrio_phage	44.4	1.3e-29
WP_032936075.1|2846533_2846770_+	hypothetical protein	NA	A0A1P8DTG1	Proteus_phage	53.7	3.3e-13
WP_159359401.1|2846727_2847936_-|integrase	tyrosine-type recombinase/integrase	integrase	I6R9B6	Salmonella_phage	76.4	1.6e-180
2848117:2848139	attR	ACACGTAAGATCACATACAAAGA	NA	NA	NA	NA
>prophage 6
NZ_CP047307	Citrobacter freundii strain L75 chromosome, complete genome	5125834	2941314	2947348	5125834		uncultured_Caudovirales_phage(50.0%)	9	NA	NA
WP_075206724.1|2941314_2941527_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	90.7	4.6e-22
WP_003030760.1|2941770_2942196_-	glutaredoxin-dependent arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	70.7	7.3e-51
WP_071684642.1|2942208_2943498_-	arsenic transporter	NA	A0A2H4J144	uncultured_Caudovirales_phage	70.2	1.2e-165
WP_003030762.1|2943542_2943863_-	transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	44.8	3.2e-19
WP_008320415.1|2943948_2944647_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.1	3.8e-89
WP_071684635.1|2944723_2944957_-	DNA polymerase V	NA	A0A222YZE2	Escherichia_phage	81.8	3.0e-22
WP_003840850.1|2945035_2945278_+	DinI family protein	NA	Q6UAW0	Klebsiella_phage	77.9	1.5e-29
WP_003030767.1|2945452_2945962_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071684636.1|2946097_2947348_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	3.6e-21
>prophage 7
NZ_CP047307	Citrobacter freundii strain L75 chromosome, complete genome	5125834	4538950	4584085	5125834	integrase,transposase	Enterobacteria_phage(30.77%)	31	4537999:4538013	4559246:4559260
4537999:4538013	attL	GCCCTGAAATTACTT	NA	NA	NA	NA
WP_016154414.1|4538950_4540141_+|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	54.7	1.5e-122
WP_016154415.1|4540542_4541565_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_016154416.1|4542132_4543356_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016154417.1|4543352_4543841_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016154418.1|4543837_4545799_+	DUF3732 domain-containing protein	NA	NA	NA	NA	NA
WP_094898333.1|4546250_4547491_-|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	79.4	1.4e-131
WP_016154424.1|4549824_4550562_+	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	32.6	9.7e-27
WP_016154425.1|4550988_4551201_+	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
WP_016154429.1|4552611_4553979_+	outer membrane porin, OprD family	NA	NA	NA	NA	NA
WP_016154430.1|4554155_4554608_+	peptide deformylase	NA	Q6VT21	Vibrio_phage	32.6	7.8e-11
WP_023302365.1|4555653_4559094_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_023336667.1|4559243_4559678_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
4559246:4559260	attR	AAGTAATTTCAGGGC	NA	NA	NA	NA
WP_023302364.1|4559897_4560845_-	UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
WP_009654822.1|4561157_4561421_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071532327.1|4561410_4561815_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_016154432.1|4561907_4564403_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	45.8	3.9e-144
WP_009654812.1|4564484_4564937_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_016154433.1|4565026_4565491_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_009654818.1|4565504_4568000_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	34.6	2.0e-92
WP_009654826.1|4568185_4569190_+	cation diffusion facilitator family transporter	NA	A0A1V0SED0	Indivirus	25.1	7.8e-19
WP_016154435.1|4569235_4569598_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_016154436.1|4569982_4570231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009654821.1|4570511_4572650_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_016154438.1|4573926_4574553_+	hypothetical protein	NA	A0A2H4J137	uncultured_Caudovirales_phage	42.6	5.7e-44
WP_087121881.1|4575269_4576416_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	92.2	1.1e-146
WP_009309932.1|4577329_4577734_+	IS66 family insertion sequence hypothetical protein	NA	Q6H9S5	Enterobacteria_phage	67.5	1.6e-23
WP_009309933.1|4577730_4578081_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZBY2	Stx2-converting_phage	67.2	9.6e-41
WP_060589128.1|4578111_4579704_+|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	60.6	8.8e-174
WP_016154439.1|4579851_4580181_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032443218.1|4582107_4582317_-	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
WP_085954962.1|4582934_4584085_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	41.6	9.8e-50
>prophage 1
NZ_CP047308	Citrobacter freundii strain L75 plasmid pCf75, complete sequence	146252	18006	42297	146252	integrase,transposase	Escherichia_phage(55.56%)	26	17955:18014	39375:42350
17955:18014	attL	GGCACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGCCTTACATTT	NA	NA	NA	NA
WP_001067855.1|18006_18711_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000557454.1|18943_19804_+	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA	NA
WP_001067855.1|20172_20877_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000845048.1|21351_22365_-|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
WP_063840321.1|22656_23211_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA	NA
WP_001749986.1|23307_23760_+	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA	NA
WP_001749985.1|23892_24366_+	trimethoprim-resistant dihydrofolate reductase DfrA27	NA	G3MBI7	Bacillus_virus	29.1	1.4e-15
WP_001749984.1|24546_25392_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA16	NA	NA	NA	NA	NA
WP_000679427.1|25508_25856_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_000259031.1|25849_26689_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_000050481.1|27093_28635_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_004201167.1|29311_29677_-	bleomycin binding protein Ble-MBL	NA	NA	NA	NA	NA
WP_004201164.1|29680_30493_-	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA	NA
WP_001749986.1|31233_31686_+	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA	NA
WP_000679427.1|31908_32256_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_000259031.1|32249_33089_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_000376616.1|33216_33420_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000184001.1|33575_34781_+	chromate efflux transporter	NA	NA	NA	NA	NA
WP_000130000.1|34791_35097_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001389365.1|35323_36088_+|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_001137892.1|36580_37165_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000004159.1|37164_38403_-	MFS transporter	NA	NA	NA	NA	NA
WP_000219391.1|38399_39305_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA	NA
WP_001067855.1|39426_40131_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000557454.1|40363_41224_+	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA	NA
WP_001067855.1|41592_42297_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
39375:42350	attR	GGCACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGCCTTACATTTCAAAAACTCTGCTTACCAGGCGCATTTCGCCCAGGGGATCACCATAATAAAATGCTGAGGCCTGGCCTTTGCGTAGTGCACGCATCACCTCAATACCTTTGATGGTGGCGTAAGCCGTCTTCATGGATTTAAATCCCAGCGTGGCGCCGATTATCCGTTTCAGTTTGCCATGATCGCATTCAATCACGTTGTTCCGGTACTTAATCTGTCGGTGTTCAACGTCAGACGGGCACCGGCCTTCGCGTTTGAGCAGAGCAAGCGCGCGACCATAGGCGGGCGCTTTATCCGTGTTGATGAATCGCGGGATCTGCCACTTCTTCACGTTGTTGAGGATTTTACCCAGAAACCGGTATGCAGCTTTGCTGTTACGACGGGAGGAGAGATAAAAATCGACAGTGCGGCCCCGGCTGTCGACGGCCCGGTACAGATACGCCCAGCGGCCATTGACCTTCACGTAGGTTTCATCCATGTGCCACGGGCAAAGATCGGAAGGGTTACGCCAGTACCAGCGCAGCCGTTTTTCCATTTCAGGCGCATAACGCTGAACCCAGCGGTAAATCGTGGAGTGATCGACATTCACTCCGCGTTCAGCCAGCATCTCCTGCAGCTCACGGTAACTGATGCCGTATTTGCAGTACCAGCGTACGGCCCACAGAATGATGTCACGCTGAAAATGCCGGCCTTTGAATGGGTTCATGTGCAGCTCCATCAGCAAAAGGGGATGATAAGTTTATCACCACCGACTATTTGCAACAGTGCCGTTTACTCATATATACTTTAGATTGATTTAAAACTTCATTTTTAATTTAAAAGGATCTAGGTGAAGATCCTTTTTGATAATCTCATGACCAAAATCCCTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCGTATAGTGTTTTGCAGTTTAGAGGAGATATCGCGATGCATACGCGGAAGGCAATAACGGAGGCGCTTCAAAAACTCGGAGTCCAAACCGGTGACCTCTTGATGGTGCATGCCTCACTTAAAGCGATTGGTCCGGTCGAAGGAGGAGCGGAGACGGTCGTTGCCGCGTTACGCTCCGCGGTTGGGCCGACTGGCACTGTGATGGGATACGCGTCGTGGGACCGATCACCCTACGAGGAGACTCTGAATGGCGCTCGGCTGGATGACGAAGCCCGCCGTACCTGGCTGCCGTTCGATCCCGCAACAGCCGGGACTTACCGTGGGTTCGGCCTGCTGAATCAATTTCTGGTTCAAGCCCCCGGCGCGCGGCGCAGCGCGCACCCCGATGCATCGATGGTCGCGGTTGGTCCGCTGGCTGAAACGCTGACGGAGCCTCACGAACTCGGTCACGCCTTGGGGGAAGGATCGCCCGTCGAGCGGTTCGTTCGCCTTGGCGGGAAGGCCCTGCTGTTGGGTGCGCCGCTAAACTCCGTTACCGCATTGCACTACGCCGAGGCGGTTGCCGATATCCCCAACAAACGGTGGGTGACGTATGAGATGCCGATGCTTGGAAGAGACGGTGAAGTCGCCTGGAAAACGGCATCGGATTACGATTCAAACGGCATTCTCGATTGCTTTGCTATCGAAGGAAAGCCGGATGCGGTTGAAACTATAGCAAATGCTTACGTGAAGCTCGGTCGCCATCGAGAAGGTGTCGTGGGCTTTGCTCAGTGCTACCTGTTCGACGCGCAGGACATCGTGACGTTCGGCGTCACCTATCTTGAGAAGCATTTCGGAACCACTCCGATCGTGCCTCCGCACGAGGCCGTCGAGCGCTCTTGCGAGCCTTCAGGTTAGAGGCCGTCGACAATGATAATCTGGATCAACGGACCTTTCGGCGCCGGAAAGACGACGCTCGCTAAGCGGCTGCGCGATCGGCGTTCCAAATCGCTGATCTTTGACCCCGAGGAAATCGGGTTCGTGGTGAAAGAAACGGTCCCCATGCCAGCGAGCGGAGACTATCAGGATCTCCCCTTGTGGAGGGGACTTACGATCGCGGCGGTCAGGGAGATTCGAAGGAATTACTCGCAGGACATCATCATCCCAATGACGCTCGTGCACCCGGACTATCTGACTGAGATACTCGACGGGGTAAGGCGGATGGCACTGTTGCAAATAGTCGGTGGTGATAAACTTATCATCCCCTTTTGCTGATGGAGCTGCACATGAACCCATTCAAAGGCCGGCATTTTCAGCGTGACATCATTCTGTGGGCCGTACGCTGGTACTGCAAATACGGCATCAGTTACCGTGAGCTGCAGGAGATGCTGGCTGAACGCGGAGTGAATGTCGATCACTCCACGATTTACCGCTGGGTTCAGCGTTATGCGCCTGAAATGGAAAAACGGCTGCGCTGGTACTGGCGTAACCCTTCCGATCTTTGCCCGTGGCACATGGATGAAACCTACGTGAAGGTCAATGGCCGCTGGGCGTATCTGTACCGGGCCGTCGACAGCCGGGGCCGCACTGTCGATTTTTATCTCTCCTCCCGTCGTAACAGCAAAGCTGCATACCGGTTTCTGGGTAAAATCCTCAACAACGTGAAGAAGTGGCAGATCCCGCGATTCATCAACACGGATAAAGCGCCCGCCTATGGTCGCGCGCTTGCTCTGCTCAAACGCGAAGGCCGGTGCCCGTCTGACGTTGAACACCGACAGATTAAGTACCGGAACAACGTGATTGAATGCGATCATGGCAAACTGAAACGGATAATCGGCGCCACGCTGGGATTTAAATCCATGAAGACGGCTTACGCCACCATCAAAGGTATTGAGGTGATGCGTGCACTACGCAAAGGCCAGGCCTCAGCATTTTATTATGGTGATCCCCTGGGCGAAATGCGCCTGGTAAGCAGAGTTTTTGAAATGTAAGGCCTTTGAATAAGACAAAAGGCTGCCTCATCGCTAACTTTGCAACAGTGCCC	NA	NA	NA	NA
>prophage 1
NZ_CP047309	Citrobacter freundii strain L75 plasmid pCf76, complete sequence	73749	43160	54977	73749		Bacillus_phage(20.0%)	11	NA	NA
WP_000697973.1|43160_43841_+	copper/silver response regulator transcription factor SilR	NA	W8CYM9	Bacillus_phage	36.5	1.9e-32
WP_001230590.1|43833_45312_+	Cu(+)/Ag(+) sensor histidine kinase	NA	W8CYF6	Bacillus_phage	31.0	1.8e-27
WP_000725002.1|45548_45980_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000695683.1|46128_46479_+	DUF305 domain-containing protein	NA	A0A218MND9	uncultured_virus	55.2	2.4e-20
WP_003830762.1|46650_48477_-	AAA family ATPase	NA	E5E3R2	Burkholderia_phage	23.2	1.5e-12
WP_000817638.1|49084_50290_+	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	90.5	1.7e-206
WP_000756331.1|50286_51258_+	ParB/RepB/Spo0J family partition protein	NA	Q1MVJ4	Enterobacteria_phage	68.9	9.6e-115
WP_000457553.1|51403_52675_-	Y-family DNA polymerase	NA	F1C5A5	Cronobacter_phage	64.2	2.7e-157
WP_000600201.1|52674_53097_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	51.5	3.1e-30
WP_000334635.1|53276_53948_-	DNA breaking-rejoining protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	59.5	1.5e-79
WP_000085947.1|54299_54977_+	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	37.4	1.9e-29
