assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009857175.1_ASM985717v1	NZ_CP047310	Stenotrophomonas maltophilia strain CPBW01 chromosome, complete genome	1	335883-335978	1	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,Cas9_archaeal,DinG	Orphan	TTGGTAGGTGTCGACCTTGGTCGACACA	28	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,Cas9_archaeal,DinG	NA,NA|31aa|down_5|NZ_CP047310.1_343824_343917_-,NA|221aa|down_6|NZ_CP047310.1_344091_344754_-	NA|635aa|up_9|NZ_CP047310.1_322959_324864_+	pfam07693, KAP_NTPase, KAP family P-loop domain	NA|94aa|up_8|NZ_CP047310.1_324814_325096_-	pfam10038, DUF2274, Protein of unknown function (DUF2274)	NA|421aa|up_7|NZ_CP047310.1_325092_326355_-	COG2948, VirB10, Type IV secretory pathway, VirB10 components [Intracellular trafficking and secretion]	NA|301aa|up_6|NZ_CP047310.1_327163_328066_-	COG3087, FtsN, Cell division protein [Cell division and chromosome partitioning]	NA|563aa|up_5|NZ_CP047310.1_328087_329776_-	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|235aa|up_4|NZ_CP047310.1_329890_330595_-	PRK00024, PRK00024, DNA repair protein RadC	NA|209aa|up_3|NZ_CP047310.1_330665_331292_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|421aa|up_2|NZ_CP047310.1_331520_332783_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|158aa|up_1|NZ_CP047310.1_332779_333253_+	PRK00601, dut, dUTP diphosphatase	NA|782aa|up_0|NZ_CP047310.1_333265_335611_+	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e	NA|238aa|down_0|NZ_CP047310.1_335981_336695_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|887aa|down_1|NZ_CP047310.1_336675_339336_-	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]	NA|217aa|down_2|NZ_CP047310.1_339387_340038_-	pfam02669, KdpC, K+-transporting ATPase, c chain	NA|686aa|down_3|NZ_CP047310.1_340034_342092_-	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB	NA|570aa|down_4|NZ_CP047310.1_342102_343812_-	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional	NA|31aa|down_5|NZ_CP047310.1_343824_343917_-	NA	NA|221aa|down_6|NZ_CP047310.1_344091_344754_-	NA	NA|220aa|down_7|NZ_CP047310.1_344773_345433_-	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|267aa|down_8|NZ_CP047310.1_345595_346396_+	cd10281, Nape_like_AP-endo, Neisseria meningitides Nape-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|458aa|down_9|NZ_CP047310.1_346392_347766_+	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily
GCF_009857175.1_ASM985717v1	NZ_CP047310	Stenotrophomonas maltophilia strain CPBW01 chromosome, complete genome	2	426456-426547	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,Cas9_archaeal,DinG	Orphan	CCCCGGCCGCCGATGCCGCCGCC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,Cas9_archaeal,DinG	NA|171aa|up_5|NZ_CP047310.1_422304_422817_-,NA|187aa|up_4|NZ_CP047310.1_422849_423410_-,NA|77aa|up_2|NZ_CP047310.1_424272_424503_-,NA|134aa|down_0|NZ_CP047310.1_427363_427765_-,NA|123aa|down_8|NZ_CP047310.1_438256_438625_-,NA|74aa|down_9|NZ_CP047310.1_439111_439333_-	NA|454aa|up_9|NZ_CP047310.1_415370_416732_+	cd16348, VOC_YdcJ_like, uncharacterized metal-dependent enzyme similar to Shigella flexneri YdcJ	NA|505aa|up_8|NZ_CP047310.1_416827_418342_-	TIGR03458, Propionyl-CoA:succinate_CoA_transferase, succinate CoA transferase	NA|932aa|up_7|NZ_CP047310.1_418729_421525_+	PRK11072, PRK11072, bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA|187aa|up_6|NZ_CP047310.1_421667_422228_-	COG1738, yhhQ, Uncharacterized member of the PurR regulon [General function prediction only]	NA|171aa|up_5|NZ_CP047310.1_422304_422817_-	NA	NA|187aa|up_4|NZ_CP047310.1_422849_423410_-	NA	NA|284aa|up_3|NZ_CP047310.1_423372_424224_-	COG4727, COG4727, Uncharacterized protein conserved in bacteria [Function unknown]	NA|77aa|up_2|NZ_CP047310.1_424272_424503_-	NA	NA|320aa|up_1|NZ_CP047310.1_424631_425591_-	pfam06258, Mito_fiss_Elm1, Mitochondrial fission ELM1	NA|197aa|up_0|NZ_CP047310.1_425717_426308_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|134aa|down_0|NZ_CP047310.1_427363_427765_-	NA	NA|266aa|down_1|NZ_CP047310.1_428402_429200_-	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|187aa|down_2|NZ_CP047310.1_429260_429821_-	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|896aa|down_3|NZ_CP047310.1_430366_433054_+	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed	NA|469aa|down_4|NZ_CP047310.1_433155_434562_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|217aa|down_5|NZ_CP047310.1_434558_435209_+	pfam14487, DUF4433, Domain of unknown function (DUF4433)	NA|536aa|down_6|NZ_CP047310.1_435198_436806_+	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase	NA|238aa|down_7|NZ_CP047310.1_436878_437592_-	pfam13391, HNH_2, HNH endonuclease	NA|123aa|down_8|NZ_CP047310.1_438256_438625_-	NA	NA|74aa|down_9|NZ_CP047310.1_439111_439333_-	NA
GCF_009857175.1_ASM985717v1	NZ_CP047310	Stenotrophomonas maltophilia strain CPBW01 chromosome, complete genome	3	2091702-2091809	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,WYL,Cas9_archaeal,DinG	Orphan	ATCCACGCATGGCGTGGATCTACC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,WYL,Cas9_archaeal,DinG	NA|113aa|up_4|NZ_CP047310.1_2083222_2083561_+,NA|72aa|down_0|NZ_CP047310.1_2092378_2092594_-,NA|158aa|down_5|NZ_CP047310.1_2096259_2096733_-,NA|126aa|down_9|NZ_CP047310.1_2100581_2100959_-	NA|136aa|up_9|NZ_CP047310.1_2080100_2080508_-	PRK12629, flgC, flagellar basal body rod protein FlgC; Provisional	NA|132aa|up_8|NZ_CP047310.1_2080511_2080907_-	PRK12620, flgB, flagellar basal body rod protein FlgB; Provisional	NA|315aa|up_7|NZ_CP047310.1_2081063_2082008_-	cd19924, REC_CheV-like, phosphoacceptor receiver (REC) domain of chemotaxis protein CheV and similar proteins	NA|219aa|up_6|NZ_CP047310.1_2082188_2082845_+	PRK12617, flgA, flagellar basal body P-ring formation protein FlgA	NA|102aa|up_5|NZ_CP047310.1_2082920_2083226_+	TIGR03824, FlgM_jcvi, flagellar biosynthesis anti-sigma factor FlgM	NA|113aa|up_4|NZ_CP047310.1_2083222_2083561_+	NA	NA|407aa|up_3|NZ_CP047310.1_2083652_2084873_+	cd16943, HATPase_AtoS-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli K-12 AtoS	NA|591aa|up_2|NZ_CP047310.1_2084890_2086663_-	cd01948, EAL, EAL domain	NA|701aa|up_1|NZ_CP047310.1_2086667_2088770_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|920aa|up_0|NZ_CP047310.1_2088901_2091661_+	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|72aa|down_0|NZ_CP047310.1_2092378_2092594_-	NA	NA|397aa|down_1|NZ_CP047310.1_2092692_2093883_-	cd11386, MCP_signal, Methyl-accepting chemotaxis protein (MCP), signaling domain	NA|205aa|down_2|NZ_CP047310.1_2094046_2094661_-	PRK00218, PRK00218, lysogenization regulator HflD	NA|381aa|down_3|NZ_CP047310.1_2094657_2095800_-	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|154aa|down_4|NZ_CP047310.1_2095796_2096258_-	cd03675, Nudix_Hydrolase_2, Contains a crystal structure of the Nudix hydrolase from Nitrosomonas europaea, which has an unknown function	NA|158aa|down_5|NZ_CP047310.1_2096259_2096733_-	NA	NA|109aa|down_6|NZ_CP047310.1_2096845_2097172_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|271aa|down_7|NZ_CP047310.1_2097276_2098089_-	COG3570, StrB, Streptomycin 6-kinase [Defense mechanisms]	NA|762aa|down_8|NZ_CP047310.1_2098227_2100513_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|126aa|down_9|NZ_CP047310.1_2100581_2100959_-	NA
