assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009867055.1_ASM986705v1	NZ_CP028132	Pseudomonas aeruginosa strain YB01 chromosome, complete genome	1	338821-338934	1	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GGCCAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|168aa|down_2|NZ_CP028132.1_343506_344010_-,NA|251aa|down_5|NZ_CP028132.1_345763_346516_-,NA|185aa|down_7|NZ_CP028132.1_347284_347839_-	NA|293aa|up_9|NZ_CP028132.1_325669_326548_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|222aa|up_8|NZ_CP028132.1_326710_327376_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_7|NZ_CP028132.1_327436_328498_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_6|NZ_CP028132.1_328753_330130_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_5|NZ_CP028132.1_330408_331161_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_4|NZ_CP028132.1_331201_332560_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_3|NZ_CP028132.1_332625_333996_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_2|NZ_CP028132.1_334111_335215_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_1|NZ_CP028132.1_335633_336731_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_0|NZ_CP028132.1_336785_337940_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|796aa|down_0|NZ_CP028132.1_339977_342365_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|351aa|down_1|NZ_CP028132.1_342475_343528_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|168aa|down_2|NZ_CP028132.1_343506_344010_-	NA	NA|204aa|down_3|NZ_CP028132.1_344114_344726_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|340aa|down_4|NZ_CP028132.1_344724_345744_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_5|NZ_CP028132.1_345763_346516_-	NA	NA|233aa|down_6|NZ_CP028132.1_346564_347263_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_7|NZ_CP028132.1_347284_347839_-	NA	NA|165aa|down_8|NZ_CP028132.1_348104_348599_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]	NA|231aa|down_9|NZ_CP028132.1_348601_349294_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]
GCF_009867055.1_ASM986705v1	NZ_CP028132	Pseudomonas aeruginosa strain YB01 chromosome, complete genome	2	1853597-1853698	2	CRISPRCasFinder	no	DEDDh	csa3,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Unclear	GCGGCGGGTATCGGCGGATAACGCC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|454aa|up_7|NZ_CP028132.1_1845738_1847100_-,NA|106aa|down_6|NZ_CP028132.1_1859941_1860259_+	NA|286aa|up_9|NZ_CP028132.1_1843933_1844791_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|268aa|up_8|NZ_CP028132.1_1844931_1845735_-	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane]	NA|454aa|up_7|NZ_CP028132.1_1845738_1847100_-	NA	NA|74aa|up_6|NZ_CP028132.1_1847242_1847464_-	COG3205, COG3205, Predicted membrane protein [Function unknown]	NA|286aa|up_5|NZ_CP028132.1_1847757_1848615_+	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold	NA|104aa|up_4|NZ_CP028132.1_1848832_1849144_+	COG3162, COG3162, Predicted membrane protein [Function unknown]	NA|552aa|up_3|NZ_CP028132.1_1849140_1850796_+	PRK09395, actP, cation/acetate symporter ActP	NA|600aa|up_2|NZ_CP028132.1_1850885_1852685_+	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	DEDDh|209aa|up_1|NZ_CP028132.1_1852681_1853308_+	PRK09145, PRK09145, 3'-5' exonuclease	NA|53aa|up_0|NZ_CP028132.1_1853416_1853575_+	pfam11752, DUF3309, Protein of unknown function (DUF3309)	NA|375aa|down_0|NZ_CP028132.1_1853833_1854958_+	COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown]	NA|89aa|down_1|NZ_CP028132.1_1854990_1855257_-	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|611aa|down_2|NZ_CP028132.1_1855538_1857371_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|188aa|down_3|NZ_CP028132.1_1857433_1857997_-	PRK10903, PRK10903, peptidylprolyl isomerase A	NA|276aa|down_4|NZ_CP028132.1_1857978_1858806_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|310aa|down_5|NZ_CP028132.1_1858812_1859742_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|106aa|down_6|NZ_CP028132.1_1859941_1860259_+	NA	NA|214aa|down_7|NZ_CP028132.1_1860405_1861047_+	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism]	NA|300aa|down_8|NZ_CP028132.1_1861151_1862051_-	pfam00892, EamA, EamA-like transporter family	NA|112aa|down_9|NZ_CP028132.1_1862060_1862396_-	PRK10089, PRK10089, chaperone CsaA
GCF_009867055.1_ASM986705v1	NZ_CP028132	Pseudomonas aeruginosa strain YB01 chromosome, complete genome	3	4130716-4131477	1,3,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTCATCCCCACGCATGTGGGGAACAC,CGGTTCATCCCCACGCATGTGGGGAACAC,CGGTTCATCCCCACGCATGTGGGGAACAC	29,29,29	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	12,12,12	12	TypeI-E	csa3,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|415aa|up_0|NZ_CP028132.1_4127957_4129202_-,NA	NA|306aa|up_9|NZ_CP028132.1_4115329_4116247_+	COG0329, DapA, Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|527aa|up_8|NZ_CP028132.1_4116339_4117920_+	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase	NA|335aa|up_7|NZ_CP028132.1_4118023_4119028_-	COG2055, COG2055, Malate/L-lactate dehydrogenases [Energy production and conversion]	NA|542aa|up_6|NZ_CP028132.1_4119267_4120893_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|132aa|up_5|NZ_CP028132.1_4120905_4121301_-	pfam02974, Inh, Protease inhibitor Inh	NA|480aa|up_4|NZ_CP028132.1_4121547_4122987_-	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal	NA|482aa|up_3|NZ_CP028132.1_4123345_4124791_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|433aa|up_2|NZ_CP028132.1_4124794_4126093_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|594aa|up_1|NZ_CP028132.1_4126089_4127871_-	TIGR01842, Proteases_secretion_ATP-binding_protein_PrtD, type I secretion system ABC transporter, PrtD family	NA|415aa|up_0|NZ_CP028132.1_4127957_4129202_-	NA	cas2|100aa|down_0|NZ_CP028132.1_4131541_4131841_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|297aa|down_1|NZ_CP028132.1_4131837_4132728_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|204aa|down_2|NZ_CP028132.1_4132754_4133366_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|221aa|down_3|NZ_CP028132.1_4133340_4134003_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|381aa|down_4|NZ_CP028132.1_4134004_4135147_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|177aa|down_5|NZ_CP028132.1_4135156_4135687_-	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas8e|523aa|down_6|NZ_CP028132.1_4135683_4137252_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|891aa|down_7|NZ_CP028132.1_4137254_4139927_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|83aa|down_8|NZ_CP028132.1_4140399_4140648_+	pfam05015, HigB-like_toxin, RelE-like toxin of type II toxin-antitoxin system HigB	NA|859aa|down_9|NZ_CP028132.1_4141123_4143700_+	PRK13557, PRK13557, histidine kinase; Provisional
GCF_009867055.1_ASM986705v1	NZ_CP028132	Pseudomonas aeruginosa strain YB01 chromosome, complete genome	4	4140709-4140864	2,4	PILER-CR,CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	TACCGGTTCATCCCCACACCCGTGGGGAAC,TCCCCACGCCCGTGGGGAACACG	30,23	0	0	NA	NA	I-E,II-B:NA	2,2	2	TypeI-E	csa3,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|415aa|up_9|NZ_CP028132.1_4127957_4129202_-,NA	NA|415aa|up_9|NZ_CP028132.1_4127957_4129202_-	NA	cas2|100aa|up_8|NZ_CP028132.1_4131541_4131841_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|297aa|up_7|NZ_CP028132.1_4131837_4132728_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|204aa|up_6|NZ_CP028132.1_4132754_4133366_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|221aa|up_5|NZ_CP028132.1_4133340_4134003_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|381aa|up_4|NZ_CP028132.1_4134004_4135147_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|177aa|up_3|NZ_CP028132.1_4135156_4135687_-	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas8e|523aa|up_2|NZ_CP028132.1_4135683_4137252_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|891aa|up_1|NZ_CP028132.1_4137254_4139927_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|83aa|up_0|NZ_CP028132.1_4140399_4140648_+	pfam05015, HigB-like_toxin, RelE-like toxin of type II toxin-antitoxin system HigB	NA|859aa|down_0|NZ_CP028132.1_4141123_4143700_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|591aa|down_1|NZ_CP028132.1_4143722_4145495_-	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families	NA|483aa|down_2|NZ_CP028132.1_4145847_4147296_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|384aa|down_3|NZ_CP028132.1_4147292_4148444_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|504aa|down_4|NZ_CP028132.1_4148433_4149945_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|261aa|down_5|NZ_CP028132.1_4149947_4150730_-	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|168aa|down_6|NZ_CP028132.1_4150921_4151425_+	pfam14595, Thioredoxin_9, Thioredoxin	NA|86aa|down_7|NZ_CP028132.1_4151446_4151704_-	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|680aa|down_8|NZ_CP028132.1_4151700_4153740_-	pfam04632, FUSC, Fusaric acid resistance protein family	NA|303aa|down_9|NZ_CP028132.1_4153739_4154648_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]
GCF_009867055.1_ASM986705v1	NZ_CP028132	Pseudomonas aeruginosa strain YB01 chromosome, complete genome	5	5502085-5502179	5	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GCCGACAACGGCAGCGAGCAGACCGT	26	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|205aa|up_9|NZ_CP028132.1_5492609_5493224_+,NA|208aa|down_2|NZ_CP028132.1_5503773_5504397_-	NA|205aa|up_9|NZ_CP028132.1_5492609_5493224_+	NA	NA|288aa|up_8|NZ_CP028132.1_5493315_5494179_-	COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]	NA|422aa|up_7|NZ_CP028132.1_5494386_5495652_+	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins	NA|139aa|up_6|NZ_CP028132.1_5495826_5496243_-	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF	NA|180aa|up_5|NZ_CP028132.1_5496397_5496937_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|115aa|up_4|NZ_CP028132.1_5497025_5497370_+	PRK11251, PRK11251, osmotically-inducible lipoprotein OsmE	NA|136aa|up_3|NZ_CP028132.1_5497413_5497821_-	pfam07498, Rho_N, Rho termination factor, N-terminal domain	NA|271aa|up_2|NZ_CP028132.1_5497967_5498780_+	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|690aa|up_1|NZ_CP028132.1_5498781_5500851_-	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane]	NA|178aa|up_0|NZ_CP028132.1_5501146_5501680_+	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]	NA|256aa|down_0|NZ_CP028132.1_5502341_5503109_-	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains	NA|205aa|down_1|NZ_CP028132.1_5503105_5503720_-	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion]	NA|208aa|down_2|NZ_CP028132.1_5503773_5504397_-	NA	NA|230aa|down_3|NZ_CP028132.1_5504534_5505224_+	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator	NA|464aa|down_4|NZ_CP028132.1_5505202_5506594_+	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|439aa|down_5|NZ_CP028132.1_5506584_5507901_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|371aa|down_6|NZ_CP028132.1_5508120_5509233_-	COG3239, DesA, Fatty acid desaturase [Lipid metabolism]	NA|367aa|down_7|NZ_CP028132.1_5509229_5510330_-	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain	NA|210aa|down_8|NZ_CP028132.1_5510488_5511118_+	PRK11202, PRK11202, HTH-type transcriptional repressor FabR	NA|168aa|down_9|NZ_CP028132.1_5511347_5511851_+	PRK13261, ureE, urease accessory protein UreE; Provisional
