assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009883855.1_ASM988385v1	NZ_CP034295	Vibrio parahaemolyticus strain 20140829008-1 chromosome II, complete sequence	1	398777-398874	1	CRISPRCasFinder	no	DEDDh	cas3,DEDDh,WYL,csa3	Unclear	TATTTTTAAAATGCCTTTTCAAAAA	25	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,DinG,cas3,csx1,PD-DExK	NA|135aa|up_9|NZ_CP034295.1_388758_389163_-,NA|743aa|down_9|NZ_CP034295.1_406680_408909_+	NA|135aa|up_9|NZ_CP034295.1_388758_389163_-	NA	NA|364aa|up_8|NZ_CP034295.1_389172_390264_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|154aa|up_7|NZ_CP034295.1_390263_390725_-	COG3915, COG3915, Uncharacterized protein conserved in bacteria [Function unknown]	NA|280aa|up_6|NZ_CP034295.1_391170_392010_-	PLN02442, PLN02442, S-formylglutathione hydrolase	NA|383aa|up_5|NZ_CP034295.1_392071_393220_-	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases	NA|269aa|up_4|NZ_CP034295.1_393513_394320_+	pfam00797, Acetyltransf_2, N-acetyltransferase	NA|290aa|up_3|NZ_CP034295.1_394400_395270_+	cd08470, PBP2_CrgA_like_1, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding domain	DEDDh|237aa|up_2|NZ_CP034295.1_395270_395981_-	PRK09146, PRK09146, DNA polymerase III subunit epsilon; Validated	NA|623aa|up_1|NZ_CP034295.1_395983_397852_-	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	NA|266aa|up_0|NZ_CP034295.1_397935_398733_-	PRK15090, PRK15090, DNA-binding transcriptional regulator KdgR; Provisional	NA|254aa|down_0|NZ_CP034295.1_398973_399735_+	PRK08993, PRK08993, 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA|175aa|down_1|NZ_CP034295.1_399753_400278_+	pfam10688, Imp-YgjV, Bacterial inner membrane protein	NA|107aa|down_2|NZ_CP034295.1_400285_400606_+	cd02238, cupin_KdgF, pectin degradation protein KdgF and related proteins, cupin domain	NA|212aa|down_3|NZ_CP034295.1_400646_401282_+	PRK09273, PRK09273, hypothetical protein; Provisional	NA|304aa|down_4|NZ_CP034295.1_401359_402271_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|310aa|down_5|NZ_CP034295.1_402369_403299_+	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)	NA|208aa|down_6|NZ_CP034295.1_403310_403934_+	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional	NA|580aa|down_7|NZ_CP034295.1_404118_405858_-	cd11477, SLC5sbd_u1, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain	NA|226aa|down_8|NZ_CP034295.1_405987_406665_+	pfam06178, KdgM, Oligogalacturonate-specific porin protein (KdgM)	NA|743aa|down_9|NZ_CP034295.1_406680_408909_+	NA
GCF_009883855.1_ASM988385v1	NZ_CP034295	Vibrio parahaemolyticus strain 20140829008-1 chromosome II, complete sequence	2	989910-990043	2	CRISPRCasFinder	no		cas3,DEDDh,WYL,csa3	Orphan	GGCGGTCGTCGTGAAGGTGGTTTCCGTGGTAACCG	35	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,DinG,cas3,csx1,PD-DExK	NA|66aa|up_7|NZ_CP034295.1_980402_980600_-,NA|128aa|up_6|NZ_CP034295.1_980614_980998_-,NA|42aa|down_1|NZ_CP034295.1_991992_992118_-	NA|571aa|up_9|NZ_CP034295.1_977300_979013_-	pfam09787, Golgin_A5, Golgin subfamily A member 5	NA|358aa|up_8|NZ_CP034295.1_979070_980144_-	pfam14130, DUF4297, Domain of unknown function (DUF4297)	NA|66aa|up_7|NZ_CP034295.1_980402_980600_-	NA	NA|128aa|up_6|NZ_CP034295.1_980614_980998_-	NA	NA|438aa|up_5|NZ_CP034295.1_980990_982304_-	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|227aa|up_4|NZ_CP034295.1_982803_983484_+	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit	NA|276aa|up_3|NZ_CP034295.1_983538_984366_-	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|133aa|up_2|NZ_CP034295.1_984577_984976_+	pfam11225, DUF3024, Protein of unknown function (DUF3024)	NA|268aa|up_1|NZ_CP034295.1_984980_985784_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|669aa|up_0|NZ_CP034295.1_985855_987862_-	PRK05054, PRK05054, exoribonuclease II; Provisional	NA|534aa|down_0|NZ_CP034295.1_990251_991853_-	cd01948, EAL, EAL domain	NA|42aa|down_1|NZ_CP034295.1_991992_992118_-	NA	NA|398aa|down_2|NZ_CP034295.1_992150_993344_+	PRK12440, PRK12440, acetate/propionate family kinase	NA|438aa|down_3|NZ_CP034295.1_993622_994936_+	cd11386, MCP_signal, Methyl-accepting chemotaxis protein (MCP), signaling domain	NA|293aa|down_4|NZ_CP034295.1_995221_996100_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|184aa|down_5|NZ_CP034295.1_996125_996677_+	COG5413, COG5413, Uncharacterized integral membrane protein [Function unknown]	NA|301aa|down_6|NZ_CP034295.1_996712_997615_-	PRK05692, PRK05692, hydroxymethylglutaryl-CoA lyase; Provisional	NA|282aa|down_7|NZ_CP034295.1_997611_998457_-	PRK05995, PRK05995, enoyl-CoA hydratase; Provisional	NA|535aa|down_8|NZ_CP034295.1_998494_1000099_-	PLN02820, PLN02820, 3-methylcrotonyl-CoA carboxylase, beta chain	NA|390aa|down_9|NZ_CP034295.1_1000133_1001303_-	cd01156, IVD, Isovaleryl-CoA dehydrogenase
GCF_009883855.1_ASM988385v1	NZ_CP034295	Vibrio parahaemolyticus strain 20140829008-1 chromosome II, complete sequence	3	1615359-1615454	3	CRISPRCasFinder	no		cas3,DEDDh,WYL,csa3	Orphan	AAAGGGATAAATGATAATTCAATGAA	26	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,DinG,cas3,csx1,PD-DExK	NA|186aa|up_5|NZ_CP034295.1_1604863_1605421_+,NA|120aa|up_0|NZ_CP034295.1_1614904_1615264_-,NA|129aa|down_1|NZ_CP034295.1_1616736_1617123_-,NA|127aa|down_2|NZ_CP034295.1_1617126_1617507_-,NA|74aa|down_3|NZ_CP034295.1_1618514_1618736_-,NA|72aa|down_4|NZ_CP034295.1_1620158_1620374_-,NA|165aa|down_5|NZ_CP034295.1_1620922_1621417_-	NA|275aa|up_9|NZ_CP034295.1_1599093_1599918_+	TIGR02739, pilus_assembly_protein_TraF, type-F conjugative transfer system pilin assembly protein TraF	NA|138aa|up_8|NZ_CP034295.1_1599939_1600353_+	TIGR02738, hypothetical_protein, type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB	NA|470aa|up_7|NZ_CP034295.1_1600563_1601973_+	pfam06122, TraH, Conjugative relaxosome accessory transposon protein	NA|936aa|up_6|NZ_CP034295.1_1601976_1604784_+	PRK13735, PRK13735, conjugal transfer mating pair stabilization protein TraG; Provisional	NA|186aa|up_5|NZ_CP034295.1_1604863_1605421_+	NA	NA|698aa|up_4|NZ_CP034295.1_1605573_1607667_+	TIGR02759, putative_conjugative_transfer_protein_TraD, type IV conjugative transfer system coupling protein TraD	NA|248aa|up_3|NZ_CP034295.1_1607891_1608635_+	PRK15137, PRK15137, DNA-specific endonuclease I; Provisional	NA|50aa|up_2|NZ_CP034295.1_1608835_1608985_+	PRK09738, PRK09738, small toxic polypeptide; Provisional	NA|1932aa|up_1|NZ_CP034295.1_1609088_1614884_+	TIGR02760, conjugative_transfer_relaxase_protein_TraI, conjugative transfer relaxase protein TraI	NA|120aa|up_0|NZ_CP034295.1_1614904_1615264_-	NA	NA|148aa|down_0|NZ_CP034295.1_1615823_1616267_-	cd13400, LT_IagB-like, Escherichia coli invasion protein IagB and similar proteins	NA|129aa|down_1|NZ_CP034295.1_1616736_1617123_-	NA	NA|127aa|down_2|NZ_CP034295.1_1617126_1617507_-	NA	NA|74aa|down_3|NZ_CP034295.1_1618514_1618736_-	NA	NA|72aa|down_4|NZ_CP034295.1_1620158_1620374_-	NA	NA|165aa|down_5|NZ_CP034295.1_1620922_1621417_-	NA	NA|91aa|down_6|NZ_CP034295.1_1621816_1622089_-	TIGR01533, Lipoprotein_E, 5'-nucleotidase, lipoprotein e(P4) family	NA|201aa|down_7|NZ_CP034295.1_1622644_1623247_+	pfam11140, DUF2913, Protein of unknown function (DUF2913)	NA|163aa|down_8|NZ_CP034295.1_1623282_1623771_-	PRK00024, PRK00024, DNA repair protein RadC	NA|427aa|down_9|NZ_CP034295.1_1624620_1625901_+	COG4533, COG4533, ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
