assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009884395.1_ASM988439v1	NZ_CP045193	Klebsiella pneumoniae strain YML0508 chromosome, complete genome	1	4513876-4513970	1	CRISPRCasFinder	no		RT,cas3,csa3,DEDDh,DinG,WYL	Orphan	ACTATGGTTTTTATGGTTTTTATT	24	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,csa3,DEDDh,DinG,WYL	NA,NA	NA|256aa|up_9|NZ_CP045193.1_4499195_4499963_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|282aa|up_8|NZ_CP045193.1_4500091_4500937_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|570aa|up_7|NZ_CP045193.1_4501274_4502984_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_6|NZ_CP045193.1_4502994_4504497_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|up_5|NZ_CP045193.1_4504634_4505330_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|786aa|up_4|NZ_CP045193.1_4505505_4507863_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|up_3|NZ_CP045193.1_4508050_4510957_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|up_2|NZ_CP045193.1_4510969_4511629_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|180aa|up_1|NZ_CP045193.1_4511703_4512243_-	TIGR03124, citrate_citX, holo-ACP synthase CitX	NA|455aa|up_0|NZ_CP045193.1_4512422_4513787_-	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family	NA|542aa|down_0|NZ_CP045193.1_4514111_4515737_+	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms]	NA|233aa|down_1|NZ_CP045193.1_4515726_4516425_+	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|276aa|down_2|NZ_CP045193.1_4516457_4517285_-	PRK09430, djlA, co-chaperone DjlA	NA|783aa|down_3|NZ_CP045193.1_4517528_4519877_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_4|NZ_CP045193.1_4519931_4521218_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_5|NZ_CP045193.1_4521223_4522213_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_6|NZ_CP045193.1_4522209_4523031_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|126aa|down_7|NZ_CP045193.1_4523033_4523411_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|283aa|down_8|NZ_CP045193.1_4523415_4524264_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|160aa|down_9|NZ_CP045193.1_4524515_4524995_-	PRK10769, folA, type 3 dihydrofolate reductase
GCF_009884395.1_ASM988439v1	NZ_CP045194	Klebsiella pneumoniae strain YML0508 plasmid pYML0508_1, complete sequence	1	57748-57841	1	CRISPRCasFinder	no			Orphan	CGAAATCTGATTTATTCAACAAAGCC	26	1	4	57774-57815|57774-57815|57774-57815|57774-57815	NZ_CP045194.1_51905-51946|NZ_CP045194.1_59427-59468|NZ_CP045194.1_95073-95032|NZ_CP045194.1_124267-124226	NA	1	1	Orphan	RT,cas3,csa3,DEDDh,DinG,WYL	NA,NA|87aa|down_0|NZ_CP045194.1_57905_58166_-	NA|113aa|up_9|NZ_CP045194.1_45501_45840_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|163aa|up_8|NZ_CP045194.1_45851_46340_+	pfam06146, PsiE, Phosphate-starvation-inducible E	NA|321aa|up_7|NZ_CP045194.1_46326_47289_+	cd07339, M48B_HtpX_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase	NA|114aa|up_6|NZ_CP045194.1_48089_48431_+	pfam01527, HTH_Tnp_1, Transposase	NA|116aa|up_5|NZ_CP045194.1_48427_48775_+	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|308aa|up_4|NZ_CP045194.1_50993_51917_+	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|148aa|up_3|NZ_CP045194.1_54754_55198_+	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family	NA|157aa|up_2|NZ_CP045194.1_55194_55665_+	pfam08808, RES, RES domain	NA|317aa|up_1|NZ_CP045194.1_55796_56747_+	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|323aa|up_0|NZ_CP045194.1_56748_57717_+	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|87aa|down_0|NZ_CP045194.1_57905_58166_-	NA	NA|308aa|down_1|NZ_CP045194.1_58515_59439_+	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|404aa|down_2|NZ_CP045194.1_59777_60989_-	cd01090, Creatinase, Creatine amidinohydrolase	NA|318aa|down_3|NZ_CP045194.1_61075_62029_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|283aa|down_4|NZ_CP045194.1_62185_63034_+	cd13625, PBP2_AA_binding_like_1, Substrate-binding domain of putative amino acid-binding protein; the type 2 periplasmic-binding protein fold	NA|224aa|down_5|NZ_CP045194.1_63057_63729_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|221aa|down_6|NZ_CP045194.1_63725_64388_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|273aa|down_7|NZ_CP045194.1_64392_65211_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|322aa|down_8|NZ_CP045194.1_65207_66173_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|327aa|down_9|NZ_CP045194.1_66241_67222_+	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]
