assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009909485.1_ASM990948v1	NZ_CP047665	Escherichia coli strain LD26-1 chromosome, complete genome	1	934589-934720	1	CRISPRCasFinder	no	DEDDh	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Unclear	GCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAG	36	0	0	NA	NA	NA	1	1	Orphan	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|343aa|up_9|NZ_CP047665.1_924131_925160_-	PRK10014, PRK10014, DNA-binding transcriptional repressor MalI; Provisional	NA|531aa|up_8|NZ_CP047665.1_925334_926927_+	PRK10110, PRK10110, PTS maltose transporter subunit IICB	NA|391aa|up_7|NZ_CP047665.1_926936_928109_+	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]	NA|334aa|up_6|NZ_CP047665.1_928212_929214_+	PRK09358, PRK09358, adenosine deaminase; Provisional	NA|347aa|up_5|NZ_CP047665.1_929248_930289_-	PRK11579, PRK11579, putative oxidoreductase; Provisional	NA|42aa|up_4|NZ_CP047665.1_930531_930657_+	NF033231, small_Blr, division septum protein Blr	NA|72aa|up_3|NZ_CP047665.1_930929_931145_+	PRK10391, PRK10391, transcription modulator YdgT	NA|147aa|up_2|NZ_CP047665.1_931230_931671_+	pfam10754, DUF2569, Protein of unknown function (DUF2569)	NA|194aa|up_1|NZ_CP047665.1_931747_932329_+	PRK05151, PRK05151, electron transport complex protein RsxA; Provisional	NA|193aa|up_0|NZ_CP047665.1_932328_932907_+	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional	NA|353aa|down_0|NZ_CP047665.1_934834_935893_+	PRK00816, rnfD, electron transport complex protein RnfD; Reviewed	NA|207aa|down_1|NZ_CP047665.1_935896_936517_+	PRK01908, PRK01908, electron transport complex protein RnfG; Validated	NA|232aa|down_2|NZ_CP047665.1_936520_937216_+	PRK12405, PRK12405, electron transport complex RsxE subunit; Provisional	NA|212aa|down_3|NZ_CP047665.1_937215_937851_+	PRK10702, PRK10702, endonuclease III; Provisional	NA|501aa|down_4|NZ_CP047665.1_938461_939964_+	PRK09584, tppB, dipeptide/tripeptide permease DtpA	NA|202aa|down_5|NZ_CP047665.1_940069_940675_+	PRK10542, PRK10542, glutathionine S-transferase; Provisional	NA|287aa|down_6|NZ_CP047665.1_940718_941579_-	PRK05756, PRK05756, pyridoxal kinase PdxY	NA|425aa|down_7|NZ_CP047665.1_941640_942915_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|219aa|down_8|NZ_CP047665.1_943043_943700_-	PRK05679, PRK05679, pyridoxal 5'-phosphate synthase	NA|110aa|down_9|NZ_CP047665.1_943758_944088_-	PRK11372, PRK11372, C-type lysozyme inhibitor
GCF_009909485.1_ASM990948v1	NZ_CP047665	Escherichia coli strain LD26-1 chromosome, complete genome	2	2065983-2066683	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	11,11,11	11	TypeI-E	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA	NA|254aa|up_9|NZ_CP047665.1_2057794_2058556_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP047665.1_2058536_2059586_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP047665.1_2059582_2060062_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP047665.1_2060061_2060772_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP047665.1_2060790_2061102_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP047665.1_2061295_2061619_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP047665.1_2061668_2062274_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP047665.1_2062273_2063701_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP047665.1_2063702_2064611_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP047665.1_2064862_2065900_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP047665.1_2066779_2067073_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|down_1|NZ_CP047665.1_2067069_2067993_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP047665.1_2067989_2068640_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP047665.1_2068621_2069368_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|358aa|down_4|NZ_CP047665.1_2069378_2070452_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|178aa|down_5|NZ_CP047665.1_2070466_2071000_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|521aa|down_6|NZ_CP047665.1_2070996_2072559_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|NZ_CP047665.1_2072656_2075356_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_8|NZ_CP047665.1_2075549_2075702_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_9|NZ_CP047665.1_2075966_2076701_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_009909485.1_ASM990948v1	NZ_CP047665	Escherichia coli strain LD26-1 chromosome, complete genome	3	2082200-2083326	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	18,18,17	18	TypeI-E	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK	NA,NA|121aa|down_3|NZ_CP047665.1_2086066_2086429_+	cas5|249aa|up_9|NZ_CP047665.1_2068621_2069368_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|358aa|up_8|NZ_CP047665.1_2069378_2070452_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|178aa|up_7|NZ_CP047665.1_2070466_2071000_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|521aa|up_6|NZ_CP047665.1_2070996_2072559_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|up_5|NZ_CP047665.1_2072656_2075356_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|up_4|NZ_CP047665.1_2075549_2075702_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|up_3|NZ_CP047665.1_2075966_2076701_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|up_2|NZ_CP047665.1_2076774_2078487_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|600aa|up_1|NZ_CP047665.1_2078486_2080286_-	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|122aa|up_0|NZ_CP047665.1_2080601_2080967_+	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|224aa|down_0|NZ_CP047665.1_2083665_2084337_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|201aa|down_1|NZ_CP047665.1_2084509_2085112_+	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|302aa|down_2|NZ_CP047665.1_2085125_2086031_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|121aa|down_3|NZ_CP047665.1_2086066_2086429_+	NA	NA|433aa|down_4|NZ_CP047665.1_2086484_2087783_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_5|NZ_CP047665.1_2087870_2089508_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_6|NZ_CP047665.1_2089735_2090527_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_7|NZ_CP047665.1_2090597_2090933_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_8|NZ_CP047665.1_2090932_2091181_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_9|NZ_CP047665.1_2091258_2093493_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional
