The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP047699	Bacillus megaterium strain 5-3 chromosome, complete genome	5171845	251657	259919	5171845		Synechococcus_phage(50.0%)	8	NA	NA
WP_013055036.1|251657_252950_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	25.5	5.9e-19
WP_097813191.1|253024_253732_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3FGF0	Synechococcus_phage	40.6	3.2e-43
WP_013055038.1|253739_253991_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_013055039.1|253987_254674_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_013055040.1|254657_256889_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.3	1.2e-157
WP_013055041.1|256864_258280_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	4.3e-55
WP_013055042.1|258306_259344_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3FZ01	Synechococcus_phage	45.6	3.8e-69
WP_013055043.1|259340_259919_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	39.2	1.3e-29
>prophage 2
NZ_CP047699	Bacillus megaterium strain 5-3 chromosome, complete genome	5171845	1996055	2013748	5171845	integrase	Bacillus_phage(52.94%)	34	1995708:1995723	2015675:2015690
1995708:1995723	attL	CAAAACTAAATGAAGA	NA	NA	NA	NA
WP_160203453.1|1996055_1997198_-|integrase	site-specific integrase	integrase	A0A1B0T6A8	Bacillus_phage	48.0	9.6e-90
WP_160203454.1|1997509_1997848_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_160203455.1|1998051_1998246_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_160203456.1|1998272_1998467_+	helix-turn-helix domain-containing protein	NA	A0A1B0T6C2	Bacillus_phage	50.0	7.0e-09
WP_160203457.1|1998466_1998688_+	hypothetical protein	NA	A0A0S2SXI3	Bacillus_phage	54.4	3.8e-11
WP_160203458.1|1998802_2000755_+	hypothetical protein	NA	A0A0A0RNI0	Bacillus_phage	50.7	2.3e-160
WP_160203459.1|2000756_2001695_+	recombinase	NA	A0A1L2JY28	Aeribacillus_phage	74.9	6.0e-114
WP_160203460.1|2001691_2002393_+	MBL fold metallo-hydrolase	NA	A0A0H4TGC9	Bacillus_phage	68.2	4.8e-92
WP_160203461.1|2002407_2002665_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203462.1|2002684_2002837_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203463.1|2002960_2003326_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_160203464.1|2003322_2003664_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203465.1|2003678_2004491_+	FAD-dependent thymidylate synthase	NA	NA	NA	NA	NA
WP_160203466.1|2004528_2004744_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_160203467.1|2004883_2005108_+	helix-turn-helix transcriptional regulator	NA	A0A0K2CNL9	Brevibacillus_phage	42.9	4.1e-05
WP_160203468.1|2005121_2005715_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203469.1|2005728_2005875_+	YozD family protein	NA	NA	NA	NA	NA
WP_160203470.1|2005889_2006087_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203471.1|2006159_2007020_+	hypothetical protein	NA	C9E2N2	Enterococcus_phage	43.5	5.1e-35
WP_160203472.1|2006955_2007771_+	ATP-binding protein	NA	A0A0S2SXI8	Bacillus_phage	61.4	1.3e-75
WP_160203473.1|2007781_2008015_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203474.1|2008035_2008299_+	hypothetical protein	NA	S5M450	Bacillus_phage	44.0	6.3e-13
WP_160203475.1|2008300_2008936_+	hypothetical protein	NA	A0A0K2CP60	Brevibacillus_phage	45.0	7.3e-47
WP_160203476.1|2008928_2009117_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203477.1|2009100_2009460_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203478.1|2009482_2010142_+	hypothetical protein	NA	A0A0K1LLN4	Bacillus_phage	53.5	8.9e-56
WP_160203479.1|2010394_2010694_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203480.1|2010708_2010882_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_160203481.1|2010871_2011396_+	HNH endonuclease	NA	E5DV84	Deep-sea_thermophilic_phage	41.4	1.6e-23
WP_160203482.1|2011399_2011867_+	single-stranded DNA-binding protein	NA	A0A290GHL8	Caldibacillus_phage	65.2	4.8e-48
WP_160203483.1|2011889_2012264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203484.1|2012276_2012774_+	DUF550 domain-containing protein	NA	A0A0K1LLP8	Bacillus_phage	42.8	2.0e-28
WP_160203485.1|2012827_2013340_+	hypothetical protein	NA	A0A0C5AJ42	Paenibacillus_phage	51.8	2.5e-37
WP_160203486.1|2013352_2013748_+	hypothetical protein	NA	A0A0K2CYI4	Paenibacillus_phage	34.1	4.3e-13
2015675:2015690	attR	CAAAACTAAATGAAGA	NA	NA	NA	NA
>prophage 3
NZ_CP047699	Bacillus megaterium strain 5-3 chromosome, complete genome	5171845	2018639	2046471	5171845	capsid,terminase	Bacillus_phage(80.0%)	26	NA	NA
WP_160203494.1|2018639_2019917_+|terminase	PBSX family phage terminase large subunit	terminase	E5DV50	Deep-sea_thermophilic_phage	75.3	2.0e-197
WP_160203495.1|2019921_2020731_-	hypothetical protein	NA	NA	NA	NA	NA
WP_160203496.1|2020766_2021513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_160203497.1|2021657_2023259_+	hypothetical protein	NA	A0A1U9WQP5	Geobacillus_phage	50.2	4.6e-146
WP_160203498.1|2023255_2024368_+	hypothetical protein	NA	M4ZR27	Bacillus_phage	51.8	3.1e-101
WP_160203499.1|2024572_2025292_+	hypothetical protein	NA	M4ZSA3	Bacillus_phage	38.1	2.5e-11
WP_160203500.1|2025295_2025685_+	hypothetical protein	NA	A0A142F1L9	Bacillus_phage	55.4	6.2e-33
WP_160203501.1|2025748_2026768_+|capsid	major capsid protein E	capsid	A0A142F1M0	Bacillus_phage	41.5	8.9e-71
WP_160203502.1|2026801_2026951_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203503.1|2027003_2027246_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203504.1|2027256_2027628_+	hypothetical protein	NA	M5AC11	Bacillus_phage	40.7	8.6e-16
WP_160203505.1|2027629_2028004_+	hypothetical protein	NA	M4ZSA5	Bacillus_phage	32.7	4.8e-06
WP_160203697.1|2028020_2028473_+	HK97 gp10 family phage protein	NA	M4ZRN5	Bacillus_phage	61.3	1.0e-39
WP_160203506.1|2028469_2028886_+	hypothetical protein	NA	M4ZR34	Bacillus_phage	45.5	1.0e-20
WP_160203507.1|2028863_2029433_+	hypothetical protein	NA	M4ZS18	Bacillus_phage	45.4	6.5e-39
WP_160203508.1|2029503_2030025_+	hypothetical protein	NA	A0A1U9WQR2	Geobacillus_phage	35.3	6.7e-14
WP_160203509.1|2030123_2030369_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203510.1|2030372_2036285_+	hypothetical protein	NA	A0A1B1P7F3	Bacillus_phage	48.1	6.4e-145
WP_160203511.1|2036281_2037727_+	hypothetical protein	NA	A0A1B1P894	Bacillus_phage	35.4	9.0e-77
WP_160203512.1|2037723_2039274_+	hypothetical protein	NA	A0A142F1N2	Bacillus_phage	45.7	1.4e-83
WP_160203513.1|2039295_2041050_+	hypothetical protein	NA	A0A218KCA8	Bacillus_phage	54.2	3.3e-150
WP_160203514.1|2041104_2044353_+	hypothetical protein	NA	A0A142F1F0	Bacillus_phage	36.3	1.5e-42
WP_160203515.1|2044375_2044819_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203516.1|2044869_2045148_+	protein xhlA	NA	A0A2H4JD40	uncultured_Caudovirales_phage	59.8	9.3e-23
WP_160203517.1|2045160_2045400_+	PTS mannose transporter subunit IID	NA	A0A0S2SXN3	Bacillus_phage	92.4	2.9e-33
WP_160203518.1|2045460_2046471_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A0S2SXM5	Bacillus_phage	85.1	1.3e-170
>prophage 4
NZ_CP047699	Bacillus megaterium strain 5-3 chromosome, complete genome	5171845	2049922	2055068	5171845		Bacillus_phage(42.86%)	9	NA	NA
WP_160203523.1|2049922_2050213_-	hypothetical protein	NA	U5PSY4	Bacillus_virus	54.9	1.1e-10
WP_160203524.1|2050345_2050540_-	hypothetical protein	NA	NA	NA	NA	NA
WP_160203525.1|2050536_2050797_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J244	uncultured_Caudovirales_phage	40.6	6.3e-05
WP_160203526.1|2051029_2051860_+	ParM/StbA family protein	NA	E5DV70	Deep-sea_thermophilic_phage	44.8	1.6e-57
WP_160203527.1|2051852_2052059_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160203528.1|2052210_2053572_+	cell division protein FtsK	NA	A0A0K1LLI3	Bacillus_phage	36.1	3.0e-66
WP_160203529.1|2053507_2054092_+	hypothetical protein	NA	B3RH37	Bacillus_virus	52.6	9.0e-52
WP_160203530.1|2054239_2054689_+	hypothetical protein	NA	A0A0K1LLM8	Bacillus_phage	51.6	2.5e-33
WP_160203531.1|2054705_2055068_+	hypothetical protein	NA	A0A0K1LMH6	Bacillus_phage	52.5	3.9e-29
>prophage 5
NZ_CP047699	Bacillus megaterium strain 5-3 chromosome, complete genome	5171845	2273236	2281448	5171845		Bacillus_virus(66.67%)	7	NA	NA
WP_013056904.1|2273236_2274013_+	NUDIX hydrolase	NA	A0A0E3JJF3	Streptomyces_phage	41.9	8.7e-10
WP_013056905.1|2274084_2274633_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	43.9	2.0e-32
WP_041816550.1|2274656_2276126_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	48.4	8.5e-115
WP_013056907.1|2276141_2276822_+	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	G3MA22	Bacillus_virus	43.3	2.2e-41
WP_013083029.1|2276856_2277678_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	64.1	1.1e-92
WP_013056909.1|2277859_2278297_+	RNA-binding protein S1	NA	NA	NA	NA	NA
WP_098196443.1|2279036_2281448_+	S8 family serine peptidase	NA	A0A217EQY2	Bacillus_phage	36.9	1.6e-17
>prophage 6
NZ_CP047699	Bacillus megaterium strain 5-3 chromosome, complete genome	5171845	4278730	4288030	5171845		Bacillus_phage(33.33%)	8	NA	NA
WP_063672643.1|4278730_4280248_-	ATP-dependent DNA helicase RecQ	NA	G5CQD7	Megavirus	31.4	1.9e-53
WP_013059045.1|4280271_4281321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013059046.1|4281578_4281827_+	ferredoxin	NA	A0A127AYY7	Bacillus_phage	54.1	3.6e-18
WP_013059047.1|4281905_4282481_-	ECF transporter S component	NA	NA	NA	NA	NA
WP_055992936.1|4283076_4284651_+	phosphoglycerate dehydrogenase	NA	A0A2H4PQU8	Staphylococcus_phage	29.8	1.3e-28
WP_013059049.1|4284682_4285372_-	peptidoglycan DD-metalloendopeptidase family protein	NA	Q8SBN9	Clostridium_phage	42.1	5.2e-14
WP_028410715.1|4285541_4287314_-	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	26.3	7.5e-25
WP_013059051.1|4287313_4288030_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	42.2	2.2e-47
>prophage 7
NZ_CP047699	Bacillus megaterium strain 5-3 chromosome, complete genome	5171845	5142230	5152697	5171845		Bacillus_phage(33.33%)	8	NA	NA
WP_013059902.1|5142230_5143463_-	PDZ domain-containing protein	NA	A0A1B1IRD3	uncultured_Mediterranean_phage	29.4	8.1e-10
WP_014457688.1|5143520_5144315_-	MBL fold metallo-hydrolase	NA	A0A2H4J3R0	uncultured_Caudovirales_phage	35.1	5.4e-39
WP_029319486.1|5144333_5145113_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028409756.1|5145099_5146467_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013059906.1|5146457_5148365_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	36.8	7.6e-39
WP_013059907.1|5148371_5149079_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	42.0	3.1e-46
WP_013085553.1|5149858_5151145_-	adenylosuccinate synthase	NA	A0A2P1EKE7	Megavirus	35.9	2.1e-69
WP_013059909.1|5151332_5152697_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	52.1	1.5e-121
