The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	0	61173	2803947	capsid,holin,protease,head,tail,portal,terminase	Staphylococcus_phage(80.56%)	64	NA	NA
WP_000625088.1|0_1662_+|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_054104817.1|1677_2865_+|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	99.7	3.0e-219
WP_000861914.1|2848_3586_+|protease	Clp protease ClpP	protease	C8CH20	Staphylococcus_phage	100.0	2.3e-129
WP_000154555.1|3609_4755_+|capsid	phage major capsid protein	capsid	A0A1X9H072	Staphylococcus_phage	100.0	5.6e-215
WP_000238236.1|4774_5059_+	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000150936.1|5048_5333_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000755150.1|5316_5679_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000114225.1|5675_6080_+	hypothetical protein	NA	A0A2I6PDJ6	Staphylococcus_phage	100.0	4.3e-69
WP_000565498.1|6076_6484_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000268741.1|6484_7129_+|tail	phage tail protein	tail	W5R9H4	Staphylococcus_phage	100.0	6.5e-120
WP_072050172.1|7170_7395_+	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	98.6	8.8e-32
WP_001096355.1|7444_7795_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_031890894.1|8039_12569_+|tail	phage tail tape measure protein	tail	A0A1X9H084	Staphylococcus_phage	99.9	0.0e+00
WP_000567408.1|12565_14050_+|tail	phage tail protein	tail	A0A2I6PDJ0	Staphylococcus_phage	100.0	1.2e-297
WP_160177699.1|14065_17851_+	hypothetical protein	NA	A0A1X9H0H3	Staphylococcus_phage	98.3	0.0e+00
WP_001153681.1|17840_17993_+	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_001040261.1|18039_18327_+	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
WP_000539688.1|18384_18681_+	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_011447039.1|18830_19007_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_001791821.1|19059_19167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|19218_19473_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861038.1|19484_20240_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_031865878.1|20430_20922_+	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	99.4	1.6e-86
WP_001110820.1|21611_21908_+	peptidoglycan hydrolase	NA	A0A1P8L6B4	Staphylococcus_phage	95.9	1.6e-49
WP_000702263.1|22418_22769_+	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|22820_23081_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669789.1|23391_23571_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_160177700.1|24527_26282_+	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001068542.1|26906_28193_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000990056.1|28392_28491_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000681968.1|28733_28910_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000691584.1|29173_29554_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000991302.1|29550_30447_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000645727.1|30447_31128_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000763048.1|31124_31997_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_001221651.1|31996_32737_+	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000182842.1|32802_33366_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_000966288.1|33486_34011_+	membrane protein	NA	NA	NA	NA	NA
WP_001033971.1|34070_34628_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000713072.1|34624_35467_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001188077.1|35523_36564_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_050958323.1|37014_37188_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000205106.1|37760_38162_-	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000181322.1|38431_39460_+	lactonase family protein	NA	NA	NA	NA	NA
WP_001021214.1|39579_40959_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_001790680.1|41010_41184_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001140871.1|41378_42308_-	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_000149686.1|42360_42921_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_000275730.1|43292_44390_+	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	1.9e-47
WP_000323161.1|44594_46157_+	SLC13 family permease	NA	NA	NA	NA	NA
WP_001802312.1|46167_46275_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001177817.1|46346_47141_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_000897635.1|47160_48237_-	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_000284431.1|48420_49890_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	4.5e-108
WP_000040873.1|49882_50704_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	1.8e-69
WP_000011538.1|50974_51577_+	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000669862.1|51557_51731_+	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000434933.1|52022_52349_-	staphostatin A	NA	NA	NA	NA	NA
WP_050961511.1|52379_53546_-|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000572878.1|54406_55702_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_001165363.1|55810_56113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000272070.1|56284_56977_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_160177701.1|56973_59166_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.9	1.3e-135
WP_000774565.1|59169_61173_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	5.8e-114
>prophage 2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	68290	73319	2803947		Catovirus(33.33%)	5	NA	NA
WP_001231451.1|68290_69238_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	27.8	1.2e-16
WP_001147868.1|69318_70680_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	43.8	1.1e-103
WP_000548781.1|70849_71380_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000140176.1|71626_72697_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_000613733.1|72764_73319_-	3'-5' exonuclease	NA	B5WZL1	Staphylococcus_phage	36.3	9.2e-30
>prophage 3
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	76770	77184	2803947		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001549145.1|76770_77184_+	hypothetical protein	NA	A0A1Q1PVU5	Staphylococcus_phage	37.7	5.1e-17
>prophage 4
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	82353	82983	2803947		Bacillus_phage(100.0%)	1	NA	NA
WP_000153530.1|82353_82983_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	30.8	8.1e-06
>prophage 5
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	98467	100204	2803947		Bacillus_phage(100.0%)	1	NA	NA
WP_000597238.1|98467_100204_+	SAV1866 family putative multidrug efflux ABC transporter	NA	W8CYL7	Bacillus_phage	30.4	1.7e-53
>prophage 6
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	113518	214615	2803947	tRNA,protease,transposase	Staphylococcus_phage(91.23%)	99	NA	NA
WP_001549130.1|113518_114880_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_000063582.1|115372_116434_+	PTS transporter subunit IIC	NA	NA	NA	NA	NA
WP_000649907.1|116691_118149_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_001144055.1|118135_118864_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.0e-36
WP_001789049.1|118999_120142_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_000181398.1|120146_120617_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_001251224.1|120775_121375_+	glucosamine-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_000031108.1|121399_121552_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000901021.1|122211_122607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000116224.1|122802_124188_+	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_000669376.1|124650_125472_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000437967.1|125634_126747_+	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_160177704.1|126768_127392_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000375864.1|127747_128212_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000992527.1|128390_129515_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_000290301.1|129583_129928_+	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
WP_001791795.1|130310_130409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000238227.1|130699_131896_+	exonuclease SbcCD subunit D	NA	NA	NA	NA	NA
WP_000584648.1|131885_134822_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_001244175.1|134818_135760_+	3'-5' exoribonuclease YhaM	NA	NA	NA	NA	NA
WP_000782121.1|135880_136843_-	foldase	NA	NA	NA	NA	NA
WP_000477959.1|137047_137605_-	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000648118.1|138337_138703_-	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_000004981.1|138844_139267_-	HIT family protein	NA	NA	NA	NA	NA
WP_000216878.1|139400_140141_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
WP_001245769.1|140133_141357_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000737976.1|141480_141984_-	signal transduction protein TraP	NA	NA	NA	NA	NA
WP_001790154.1|142146_142257_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000233526.1|142246_143284_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_000162881.1|143341_144265_+	ferrochelatase	NA	NA	NA	NA	NA
WP_000167538.1|144288_145689_+	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_000132890.1|146011_146566_+	serine hydrolase family protein	NA	NA	NA	NA	NA
WP_000206350.1|149022_149811_-	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	95.8	5.3e-140
WP_001790220.1|149823_150363_-	hypothetical protein	NA	Q4ZCB9	Staphylococcus_virus	76.8	2.0e-61
WP_000473596.1|151161_152097_+	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
WP_000782464.1|152098_153082_+	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
WP_000416759.1|153323_153467_+	gallidermin/nisin family lantibiotic	NA	NA	NA	NA	NA
WP_000416756.1|154203_154347_+	gallidermin/nisin family lantibiotic	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
WP_001092605.1|154411_157405_+	lantibiotic dehydratase	NA	A0A2H4PQG8	Staphylococcus_phage	97.3	0.0e+00
WP_000566596.1|157397_158642_+	lanthionine synthetase C family protein	NA	A0A2H4PQH9	Staphylococcus_phage	100.0	5.1e-238
WP_000504439.1|158657_159176_+	enterotoxin	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
WP_000691541.1|159185_160559_+	S8 family serine peptidase	NA	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
WP_001096791.1|160581_161274_+	lantibiotic protection ABC transporter ATP-binding subunit	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
WP_000581552.1|161270_162032_+	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
WP_000586140.1|162028_162727_+	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
WP_001092763.1|163200_163767_-	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	100.0	3.3e-99
WP_001039435.1|164730_165438_+|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	100.0	2.6e-130
WP_001039447.1|165562_166285_+|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
WP_001038867.1|166342_167062_+|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
WP_001038704.1|167182_167902_+|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
WP_011447030.1|167850_167958_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038759.1|168059_168776_+|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
WP_001038688.1|168926_169646_+|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
WP_001791797.1|169710_169845_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011443644.1|169825_171565_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.4	4.4e-288
WP_000072576.1|171557_172757_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	99.7	5.5e-229
WP_000831218.1|173605_177718_+	SMEK domain-containing protein	NA	A0A2H4PQT3	Staphylococcus_phage	100.0	0.0e+00
WP_002868972.1|178256_178616_+	DUF1433 domain-containing protein	NA	NA	NA	NA	NA
WP_001791893.1|178963_179065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001801861.1|179187_179283_-	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001549059.1|179485_179629_+|transposase	transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
WP_000070811.1|180232_180616_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000375476.1|180626_180803_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000809857.1|180804_180990_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000494956.1|181103_181745_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.6e-76
WP_000414205.1|181962_182514_-	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.1	1.0e-20
WP_000627551.1|182611_182956_-	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
WP_000669046.1|182996_183623_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	82.7	7.1e-79
WP_000070653.1|183698_184694_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	96.4	7.1e-73
WP_001795535.1|184774_185425_-	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	88.4	2.7e-44
WP_011443643.1|185727_186183_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	3.0e-79
WP_000348360.1|186341_187820_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.0e-281
WP_000778523.1|187824_188826_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	4.8e-186
WP_000718107.1|188822_189080_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000672014.1|189145_189619_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	4.7e-83
WP_002868962.1|189623_190370_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.1e-142
WP_160177705.1|191365_192958_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_000933822.1|193328_194522_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000366154.1|194646_195555_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
WP_000453320.1|195766_196600_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
WP_000623471.1|198694_199048_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
WP_001200542.1|199044_199410_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000091445.1|199665_199968_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096494.1|200227_200941_+	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_001168904.1|201380_202016_-|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001030465.1|202311_202755_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	85.0	3.0e-55
WP_001153742.1|202741_203185_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000671052.1|203297_203768_-	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
WP_000384171.1|203966_204191_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032833.1|204466_205321_+	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000163235.1|205615_206011_-	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
WP_000989121.1|206028_207321_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_000221179.1|207320_207635_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
WP_001261677.1|208157_209660_+	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
WP_000384181.1|210152_211184_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	4.8e-197
WP_000493892.1|211190_211823_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
WP_001159022.1|211833_213015_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
WP_001008551.1|213027_213492_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_031808284.1|213613_214615_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	5.9e-184
>prophage 7
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	217775	231889	2803947	tRNA	Staphylococcus_phage(100.0%)	7	NA	NA
WP_000764419.1|217775_218339_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000526539.1|218335_219289_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_001025061.1|219398_220580_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_001108732.1|220870_223285_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.2	0.0e+00
WP_000836465.1|223306_223618_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
WP_001050548.1|223943_230504_+	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.1	2.0e-304
WP_000285019.1|230620_231889_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	100.0	4.1e-57
>prophage 8
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	243485	248813	2803947		Staphylococcus_phage(50.0%)	3	NA	NA
WP_160177706.1|243485_244343_+	DUF1444 domain-containing protein	NA	A0A2H4PQY3	Staphylococcus_phage	100.0	6.8e-72
WP_001048368.1|244371_244968_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_000118293.1|244988_248813_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	47.0	2.6e-83
>prophage 9
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	257559	259266	2803947		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000862083.1|257559_259266_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	100.0	1.2e-274
>prophage 10
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	265883	268514	2803947	protease,tRNA	Cronobacter_phage(50.0%)	2	NA	NA
WP_000186029.1|265883_267146_+|tRNA	tyrosine--tRNA ligase	tRNA	K4F5T3	Cronobacter_phage	42.1	2.7e-85
WP_001279338.1|267239_268514_-|protease	trypsin-like serine protease	protease	A0A1B1IRD3	uncultured_Mediterranean_phage	29.0	1.7e-10
>prophage 11
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	272283	276418	2803947		Staphylococcus_phage(50.0%)	4	NA	NA
WP_000808845.1|272283_273888_-	phosphoglycerate dehydrogenase	NA	A0A2H4PQU8	Staphylococcus_phage	100.0	1.2e-114
WP_000291415.1|273874_275035_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_000553926.1|275148_275595_-	OsmC family protein	NA	NA	NA	NA	NA
WP_000174282.1|275674_276418_+	glycerophosphoryl diester phosphodiesterase	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	30.0	4.9e-18
>prophage 12
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	293958	297156	2803947		Streptomyces_phage(100.0%)	1	NA	NA
WP_000226911.1|293958_297156_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	30.7	1.3e-136
>prophage 13
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	302089	303847	2803947		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001232648.1|302089_303847_+	pyruvate kinase	NA	A0A2H4PQU5	Staphylococcus_phage	100.0	2.6e-41
>prophage 14
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	310669	318833	2803947		Feldmannia_irregularis_virus(25.0%)	5	NA	NA
WP_000080028.1|310669_311374_+	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	28.7	1.6e-07
WP_011443641.1|311373_313035_+	PAS domain S-box protein	NA	W8CYF6	Bacillus_phage	39.4	5.8e-35
WP_000849439.1|313533_315021_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038308.1|315314_317945_+	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	33.0	6.1e-47
WP_001114452.1|317960_318833_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	39.1	2.0e-42
>prophage 15
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	322747	333900	2803947	protease,tRNA	Brevibacillus_phage(20.0%)	12	NA	NA
WP_000808621.1|322747_323668_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	29.4	8.1e-31
WP_001790562.1|323760_323883_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000435132.1|324080_326018_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.0	7.8e-116
WP_000049140.1|326443_327937_+	amino acid permease	NA	NA	NA	NA	NA
WP_001791162.1|328165_328693_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.1	4.1e-11
WP_001125540.1|328721_328922_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001138360.1|328968_329325_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_000032657.1|329466_330075_+	NUDIX domain-containing protein	NA	A0A060AB76	Staphylococcus_phage	35.9	6.6e-21
WP_001280018.1|330093_331023_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001790560.1|331027_331138_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000127573.1|331185_332487_+	trigger factor	NA	NA	NA	NA	NA
WP_000472302.1|332637_333900_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.0	5.0e-140
>prophage 16
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	343467	346098	2803947	tRNA	Catovirus(100.0%)	1	NA	NA
WP_000425353.1|343467_346098_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	40.7	3.7e-153
>prophage 17
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	355965	391345	2803947	tRNA	uncultured_Mediterranean_phage(18.75%)	31	NA	NA
WP_001005767.1|355965_356970_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_001019182.1|356971_357997_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001112045.1|358019_359159_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001160682.1|359177_359438_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_000749795.1|359712_361992_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_000594993.1|362194_364468_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
WP_000364542.1|364489_365008_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_001058583.1|365435_367625_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	37.7	6.9e-12
WP_000869983.1|367636_368089_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_000717800.1|368085_368961_+	cell wall amidase	NA	A0A0N9SGH1	Paenibacillus_phage	33.7	4.7e-12
WP_000590826.1|369421_370684_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000044799.1|370699_372466_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L0E9	Tupanvirus	27.3	1.3e-16
WP_001790559.1|372798_372927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000682646.1|372926_373700_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_000102735.1|373860_375135_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.7	1.8e-105
WP_000704122.1|375219_375642_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_000752913.1|375741_375924_+	CsbD family protein	NA	NA	NA	NA	NA
WP_000009238.1|375963_376110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000985886.1|376346_377360_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000409167.1|377671_378814_+	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	29.3	8.3e-33
WP_000066097.1|378814_379933_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000567028.1|380394_381063_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_001283311.1|381064_383542_+	ATP-dependent RecD-like DNA helicase	NA	A0A0K2FLP8	Brevibacillus_phage	29.0	1.1e-66
WP_000734066.1|383884_386515_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.4	3.2e-64
WP_000426912.1|386577_386838_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_000939059.1|386841_387270_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_000134779.1|387284_387593_+	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_000342266.1|387877_388516_+	O-methyltransferase	NA	A0A2P1JQT7	Mycobacterium_phage	28.8	1.6e-09
WP_000137775.1|388518_389442_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_000848304.1|389453_390722_+	U32 family peptidase	NA	Q6DW11	Phage_TP	31.7	4.0e-36
WP_000648617.1|390721_391345_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.1	2.8e-35
>prophage 18
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	398017	400404	2803947		Lactococcus_phage(50.0%)	2	NA	NA
WP_000542309.1|398017_399238_+	Fic family protein	NA	Q9AZ49	Lactococcus_phage	33.3	5.0e-52
WP_160177707.1|399651_400404_+	exotoxin	NA	A0EX09	Staphylococcus_phage	39.8	3.5e-48
>prophage 19
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	407673	413837	2803947		Bacillus_phage(33.33%)	5	NA	NA
WP_000439693.1|407673_408135_+	ComE operon protein 2	NA	A7KUY9	Bacillus_phage	58.8	3.6e-35
WP_000953301.1|408193_410341_+	DNA internalization-related competence protein ComEC/Rec2	NA	Q332C0	Clostridium_botulinum_C_phage	32.2	1.2e-32
WP_001282562.1|410397_411372_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_001274017.1|411416_411668_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_000368341.1|412013_413837_+	elongation factor 4	NA	A0A1S5SF82	Streptococcus_phage	25.1	6.1e-22
>prophage 20
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	417328	420436	2803947		Micromonas_pusilla_virus(50.0%)	2	NA	NA
WP_000034716.1|417328_419161_+	molecular chaperone DnaK	NA	G8DDB7	Micromonas_pusilla_virus	46.5	4.4e-137
WP_001119021.1|419296_420436_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	25.8	1.2e-26
>prophage 21
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	426906	427854	2803947		Rhizobium_phage(100.0%)	1	NA	NA
WP_001117767.1|426906_427854_+	PhoH family protein	NA	L7TP00	Rhizobium_phage	46.8	6.4e-47
>prophage 22
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	430907	444635	2803947	tRNA	Klosneuvirus(25.0%)	13	NA	NA
WP_001030080.1|430907_432299_-|tRNA	glycine--tRNA ligase	tRNA	A0A1V0SIF1	Klosneuvirus	27.4	4.7e-46
WP_001789866.1|432633_433257_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000411299.1|433267_434086_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_001217261.1|434146_435946_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
WP_001283055.1|436169_437276_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624584.1|437406_438084_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_000683931.1|438086_439187_+	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_001062180.1|439300_440647_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
WP_000924214.1|440656_441547_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001213908.1|441672_442458_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000564316.1|442499_443363_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_001095260.1|443349_443760_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000863556.1|444035_444635_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	54.7	9.2e-60
>prophage 23
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	450808	451432	2803947		Streptococcus_phage(100.0%)	1	NA	NA
WP_001223008.1|450808_451432_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	37.1	1.6e-30
>prophage 24
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	456976	459788	2803947		Prochlorococcus_phage(100.0%)	2	NA	NA
WP_000019687.1|456976_458323_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	E3SN07	Prochlorococcus_phage	39.7	6.3e-64
WP_000202189.1|458315_459788_+	glycine dehydrogenase subunit 2	NA	E3SN07	Prochlorococcus_phage	41.3	6.2e-81
>prophage 25
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	467288	473859	2803947		Indivirus(66.67%)	6	NA	NA
WP_001286928.1|467288_468626_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	37.7	1.6e-43
WP_000159865.1|468618_468849_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_000183378.1|468826_469708_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	26.1	8.9e-11
WP_001124985.1|470139_470592_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_000942211.1|470607_472287_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001291535.1|472437_473859_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.3	5.1e-40
>prophage 26
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	480688	482095	2803947		Synechococcus_phage(100.0%)	1	NA	NA
WP_000193707.1|480688_482095_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A222YX62	Synechococcus_phage	31.1	4.3e-31
>prophage 27
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	486741	488226	2803947		Cyanophage(100.0%)	1	NA	NA
WP_000105070.1|486741_488226_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	37.8	2.4e-80
>prophage 28
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	491755	503369	2803947		Klosneuvirus(16.67%)	12	NA	NA
WP_001171351.1|491755_492664_-	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	31.5	3.4e-05
WP_000365246.1|492745_493288_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000392691.1|493392_493842_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_000447733.1|493890_494778_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.1	5.6e-37
WP_001183429.1|494855_495362_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_000273371.1|495453_496185_+	segregation and condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	21.8	7.9e-05
WP_000368653.1|496177_496720_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA	NA
WP_000159577.1|496712_497450_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000064078.1|497582_498308_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
WP_000987769.1|498288_500040_+	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	33.6	1.7e-21
WP_001548912.1|500284_501214_+	DUF1672 domain-containing protein	NA	NA	NA	NA	NA
WP_001033768.1|501206_503369_+	hypothetical protein	NA	B5WZK7	Staphylococcus_phage	97.5	1.1e-107
>prophage 29
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	507748	510427	2803947		Bacillus_phage(50.0%)	3	NA	NA
WP_001151997.1|507748_507997_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
WP_001163801.1|508104_509058_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000902119.1|509047_510427_+	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.9e-56
>prophage 30
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	519851	525318	2803947		Bacillus_phage(25.0%)	7	NA	NA
WP_001043863.1|519851_520124_+	DNA-binding protein HU	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
WP_000450553.1|520554_521127_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA	NA
WP_000774684.1|521129_521855_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_001817755.1|521871_522816_+	heptaprenyl diphosphate synthase subunit II	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
WP_000442480.1|522907_523357_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
WP_000789522.1|523565_523766_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001269929.1|524151_525318_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	7.6e-34
>prophage 31
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	528980	529556	2803947		Bacillus_virus(100.0%)	1	NA	NA
WP_000004947.1|528980_529556_+	IDEAL domain-containing protein	NA	G3MAV7	Bacillus_virus	27.2	2.7e-08
>prophage 32
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	532926	540432	2803947	tRNA	unidentified_phage(25.0%)	5	NA	NA
WP_000361544.1|532926_534129_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	42.5	3.2e-35
WP_000049919.1|534115_535087_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_000525078.1|535110_537804_+	ATP-dependent helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
WP_000858789.1|538125_539418_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.9e-54
WP_000362212.1|539745_540432_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	32.6	5.5e-08
>prophage 33
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	544172	544799	2803947		Bacillus_phage(100.0%)	1	NA	NA
WP_001108889.1|544172_544799_-	Holliday junction resolvase RecU	NA	A0A1C8E9C3	Bacillus_phage	35.5	1.7e-24
>prophage 34
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	554124	555003	2803947		Bacillus_phage(100.0%)	1	NA	NA
WP_001133011.1|554124_555003_+	5'-3' exonuclease	NA	S5M4P0	Bacillus_phage	29.5	6.2e-20
>prophage 35
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	593526	609079	2803947	transposase	Staphylococcus_phage(37.5%)	21	NA	NA
WP_000282171.1|593526_594231_-	queuosine precursor transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	23.8	8.4e-12
WP_001795441.1|594475_594670_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_000691942.1|594681_594933_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000404650.1|594970_596095_+	virulence factor C	NA	NA	NA	NA	NA
WP_000995287.1|596110_596548_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA	NA
WP_000934885.1|596971_597928_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	85.2	1.6e-167
WP_000175746.1|598127_598607_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	79.9	2.0e-73
WP_000166059.1|598621_599461_+	fatty acid kinase FakB2	NA	A0A0N9SI50	Staphylococcus_phage	77.3	2.3e-48
WP_000159902.1|599546_600080_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_000913315.1|600072_600501_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_000473652.1|600512_601013_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000801007.1|601012_601234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000342125.1|601425_602916_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	30.5	2.3e-22
WP_000620194.1|603315_603825_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000160904.1|603836_604907_+	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_000084780.1|604923_605538_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_000093392.1|605668_606154_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
WP_000184336.1|606397_606598_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001788795.1|606674_606806_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000192137.1|607067_607727_+	response regulator transcription factor ArlR	NA	W8CYM9	Bacillus_phage	33.8	1.1e-34
WP_000166801.1|607723_609079_+	sensor histidine kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.8	3.5e-14
>prophage 36
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	615244	616036	2803947		Halovirus(100.0%)	1	NA	NA
WP_001185421.1|615244_616036_+	MoxR family ATPase	NA	R4TG24	Halovirus	34.2	3.3e-12
>prophage 37
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	620516	625547	2803947	lysis	Lactobacillus_phage(33.33%)	7	NA	NA
WP_000138413.1|620516_621653_-	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.3	7.4e-34
WP_001788788.1|621684_622314_-|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	lysis	NA	NA	NA	NA
WP_001215907.1|622332_622602_-	acylphosphatase	NA	NA	NA	NA	NA
WP_000269923.1|622764_623073_+	DUF1033 family protein	NA	NA	NA	NA	NA
WP_000809131.1|623243_623444_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
WP_000876201.1|623640_624042_+	sarA expression modulator protein Msa	NA	NA	NA	NA	NA
WP_000216946.1|624281_625547_-	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.2	6.2e-13
>prophage 38
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	633392	634994	2803947		Klosneuvirus(100.0%)	1	NA	NA
WP_000942300.1|633392_634994_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	25.7	5.5e-51
>prophage 39
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	640079	643533	2803947		Indivirus(50.0%)	3	NA	NA
WP_000079447.1|640079_640931_+	phosphate ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	8.9e-16
WP_000974847.1|640937_641579_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_000077571.1|641718_643533_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	47.1	5.1e-154
>prophage 40
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	646947	647649	2803947		Tupanvirus(100.0%)	1	NA	NA
WP_000571258.1|646947_647649_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	30.3	1.5e-13
>prophage 41
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	655165	657520	2803947		Acinetobacter_phage(100.0%)	3	NA	NA
WP_000154116.1|655165_655948_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	36.3	1.2e-27
WP_000173832.1|655949_656948_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	35.3	3.8e-34
WP_000604817.1|656953_657520_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	32.1	1.3e-23
>prophage 42
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	661838	663101	2803947		Bacillus_phage(100.0%)	1	NA	NA
WP_000283016.1|661838_663101_-	Y-family DNA polymerase	NA	O64031	Bacillus_phage	44.3	2.6e-96
>prophage 43
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	672760	677154	2803947		Bacillus_phage(50.0%)	2	NA	NA
WP_001289569.1|672760_675163_-	DNA topoisomerase IV subunit A	NA	A0A172JHV7	Bacillus_phage	32.2	1.8e-93
WP_001548666.1|675162_677154_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	40.5	8.0e-116
>prophage 44
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	683090	684737	2803947		Vibrio_phage(100.0%)	1	NA	NA
WP_001088978.1|683090_684737_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.4	2.5e-22
>prophage 45
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	688406	689528	2803947		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000691284.1|688406_689528_-	exonuclease SbcCD subunit D	NA	A0A1X9I9U0	Staphylococcus_phage	22.7	4.3e-10
>prophage 46
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	693677	699332	2803947		Phage_Wrath(25.0%)	7	NA	NA
WP_001208760.1|693677_694301_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	63.8	3.5e-17
WP_000380731.1|694679_695543_-	CAP domain-containing protein	NA	U5Q0C0	Bacillus_phage	41.5	4.1e-16
WP_001791425.1|695616_695721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000688126.1|695717_696695_-	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	100.0	2.1e-186
WP_001085655.1|696851_697121_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_001265708.1|697574_697724_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000082539.1|697814_699332_-	catalase	NA	A0A2K9L0T1	Tupanvirus	43.2	2.3e-91
>prophage 47
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	709468	713744	2803947		Bacillus_phage(50.0%)	6	NA	NA
WP_000841351.1|709468_710002_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	43.5	3.4e-21
WP_001027143.1|710140_710329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000202390.1|710441_711044_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000670300.1|711040_712132_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000603968.1|712135_712867_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000593436.1|712835_713744_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.9	3.1e-22
>prophage 48
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	718292	723822	2803947		Staphylococcus_phage(60.0%)	13	NA	NA
WP_000900530.1|718292_718583_-	hypothetical protein	NA	S6B1L4	Thermus_phage	35.1	5.4e-05
WP_000600812.1|719011_719149_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000903039.1|719145_719412_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001790531.1|719531_719654_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000906224.1|719688_719937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000899337.1|720057_720642_-	hypothetical protein	NA	Q4ZE35	Staphylococcus_virus	72.0	2.0e-30
WP_000956747.1|720687_720939_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001791646.1|720939_721113_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000477492.1|721067_721172_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000006110.1|721683_721869_-	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
WP_001788716.1|722296_722407_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001002340.1|723107_723314_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	59.7	1.3e-13
WP_001789892.1|723597_723822_-	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	71.0	4.3e-18
>prophage 49
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	731386	737756	2803947	transposase	Streptococcus_phage(33.33%)	7	NA	NA
WP_001251200.1|731386_732745_+	cell division protein FtsK	NA	A0A1S5SFB5	Streptococcus_phage	29.9	1.2e-41
WP_000681147.1|732749_734597_+	membrane protein	NA	NA	NA	NA	NA
WP_000247474.1|734586_735633_+	CHAP domain-containing protein	NA	A0A1X9I9L1	Staphylococcus_phage	36.9	8.1e-19
WP_000810443.1|735639_736230_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001255377.1|736285_736627_+	cystatin-like fold lipoprotein	NA	NA	NA	NA	NA
WP_000746372.1|736735_737239_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_078056058.1|737219_737756_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	43.6	9.9e-29
>prophage 50
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	743119	743596	2803947		Fowlpox_virus(100.0%)	1	NA	NA
WP_000448078.1|743119_743596_+	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	38.0	1.2e-22
>prophage 51
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	749538	756010	2803947		Acanthocystis_turfacea_Chlorella_virus(33.33%)	4	NA	NA
WP_001103743.1|749538_750357_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	2.4e-26
WP_001077635.1|750821_751364_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_000516261.1|751369_753379_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.3	2.8e-60
WP_000073352.1|753391_756010_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.7	8.5e-41
>prophage 52
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	765424	766468	2803947		Bacillus_phage(100.0%)	1	NA	NA
WP_160177715.1|765424_766468_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	69.2	1.2e-123
>prophage 53
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	770669	776213	2803947		Bacillus_virus(33.33%)	4	NA	NA
WP_000664764.1|770669_771956_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	27.9	8.7e-15
WP_000089941.1|771955_773221_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	26.8	1.2e-40
WP_001293307.1|773251_773965_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001806691.1|773969_776213_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	47.7	6.9e-84
>prophage 54
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	781353	793166	2803947	tRNA	Klosneuvirus(33.33%)	9	NA	NA
WP_000864185.1|781353_782325_-	riboflavin biosynthesis protein RibF	NA	A0A1V0SJE1	Klosneuvirus	32.1	1.7e-07
WP_000282305.1|782339_783257_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_000097322.1|783425_783776_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_000043634.1|784161_786279_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.1	2.4e-25
WP_000020853.1|786283_786601_-	YlxQ family RNA-binding protein	NA	NA	NA	NA	NA
WP_000727423.1|786597_786882_-	YlxR family protein	NA	NA	NA	NA	NA
WP_000097462.1|786902_788078_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_000036631.1|788098_788566_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_001820550.1|788855_793166_-	DNA polymerase III subunit alpha	NA	A0A0A8WJ41	Clostridium_phage	41.2	3.5e-23
>prophage 55
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	797489	798260	2803947		Flavobacterium_phage(100.0%)	1	NA	NA
WP_000473705.1|797489_798260_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	41.5	7.3e-25
>prophage 56
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	803034	816705	2803947	protease,tRNA	Erwinia_phage(16.67%)	11	NA	NA
WP_000379054.1|803034_804438_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IDZ7	Erwinia_phage	25.6	4.9e-27
WP_000072681.1|804503_805049_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_001015597.1|805045_805942_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	31.5	3.6e-31
WP_000195254.1|806358_807666_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_001548566.1|807821_809897_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	39.2	1.7e-105
WP_000593192.1|810070_810943_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_000672867.1|811115_812360_-	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA	NA
WP_001041662.1|812387_813506_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JQB6	Staphylococcus_phage	61.1	9.5e-50
WP_000110253.1|813732_814641_-	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	33.2	3.0e-17
WP_001020801.1|814662_815829_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_000176394.1|815937_816705_-	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	44.1	2.5e-25
>prophage 57
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	830089	832147	2803947		Acanthamoeba_polyphaga_mimivirus(33.33%)	3	NA	NA
WP_000043237.1|830089_830821_-	ribonuclease III	NA	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	28.8	5.9e-24
WP_000426914.1|830936_831170_-	acyl carrier protein	NA	E3SSM9	Prochlorococcus_phage	63.3	1.6e-07
WP_000167269.1|831412_832147_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.3	3.1e-17
>prophage 58
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	842517	844512	2803947		Moumouvirus(100.0%)	1	NA	NA
WP_000579564.1|842517_844512_-	serine/threonine protein kinase Stk1	NA	M1PCM5	Moumouvirus	34.8	5.5e-24
>prophage 59
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	847659	848595	2803947	tRNA	Prochlorococcus_phage(100.0%)	1	NA	NA
WP_000161299.1|847659_848595_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	28.9	1.2e-10
>prophage 60
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	853607	855864	2803947		Methanothermobacter_phage(50.0%)	3	NA	NA
WP_000722165.1|853607_854807_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.9	1.2e-42
WP_000933956.1|855022_855241_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_000368227.1|855240_855864_-	guanylate kinase	NA	A0A143DIC6	Abalone_herpesvirus	34.7	3.6e-22
>prophage 61
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	859178	859790	2803947		Pandoravirus(100.0%)	1	NA	NA
WP_001040245.1|859178_859790_-	orotate phosphoribosyltransferase	NA	S4VS55	Pandoravirus	33.8	6.2e-27
>prophage 62
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	863757	868368	2803947		Halovirus(33.33%)	4	NA	NA
WP_001190913.1|863757_864858_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.7	5.6e-63
WP_000767028.1|864859_866134_-	dihydroorotase	NA	NA	NA	NA	NA
WP_001016166.1|866151_867033_-	aspartate carbamoyltransferase	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	33.9	4.6e-31
WP_001178619.1|867060_868368_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	34.0	3.3e-54
>prophage 63
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	872831	875585	2803947	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000384691.1|872831_875585_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2I2L3Y0	Orpheovirus	28.0	3.6e-90
>prophage 64
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	895175	895364	2803947		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001245802.1|895175_895364_-	hypothetical protein	NA	A0A0K1LL29	Staphylococcus_phage	86.9	3.8e-20
>prophage 65
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	904391	906351	2803947		Staphylococcus_phage(100.0%)	3	NA	NA
WP_001802045.1|904391_904616_-	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	71.4	5.6e-18
WP_000765708.1|904572_904719_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000857487.1|905391_906351_+	beta-channel forming cytolysin	NA	A0A2H4PQH7	Staphylococcus_phage	29.9	1.7e-34
>prophage 66
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	920353	924911	2803947		Staphylococcus_phage(33.33%)	3	NA	NA
WP_001018928.1|920353_920668_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	46.6	6.6e-25
WP_001249285.1|920840_923189_-	endonuclease MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	25.3	1.1e-15
WP_000161942.1|923198_924911_-	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.0	8.9e-15
>prophage 67
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	929652	930711	2803947	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_000003559.1|929652_930711_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	35.5	1.9e-31
>prophage 68
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	942657	945565	2803947		uncultured_Mediterranean_phage(50.0%)	5	NA	NA
WP_000401377.1|942657_943140_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	2.6e-28
WP_001263796.1|943141_943684_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_000814565.1|943753_944143_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049150.1|944145_944400_-	YlbG family protein	NA	NA	NA	NA	NA
WP_000757569.1|944638_945565_+	glycerophosphodiester phosphodiesterase	NA	M1I1K8	Paramecium_bursaria_Chlorella_virus	26.2	1.7e-12
>prophage 69
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	957082	958930	2803947		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000182654.1|957082_958930_-	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	26.2	1.8e-21
>prophage 70
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	967065	975898	2803947		Mycoplasma_phage(25.0%)	9	NA	NA
WP_000433551.1|967065_968160_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	44.3	1.4e-37
WP_001020625.1|968172_968712_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000455597.1|968855_969131_-	UPF0223 family protein	NA	NA	NA	NA	NA
WP_000260117.1|969298_970705_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.1	1.2e-46
WP_000863440.1|970708_972001_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
WP_000068176.1|972091_973069_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
WP_000035320.1|973072_974185_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	A0A0K0KW14	Prochlorococcus_phage	27.8	1.4e-05
WP_000668339.1|974355_974982_-	cell-wall-binding lipoprotein	NA	NA	NA	NA	NA
WP_000957036.1|975346_975898_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.2	1.6e-13
>prophage 71
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	982012	986392	2803947		Bacillus_virus(50.0%)	5	NA	NA
WP_001289614.1|982012_982246_+	glutaredoxin family protein	NA	G3MBF0	Bacillus_virus	38.7	8.4e-09
WP_000040054.1|982482_984201_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_000437472.1|984203_984470_-	phosphocarrier protein HPr	NA	NA	NA	NA	NA
WP_000505965.1|984623_985166_-	hypothetical protein	NA	NA	NA	NA	NA
WP_160177718.1|985219_986392_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	42.8	4.0e-75
>prophage 72
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	989571	1004331	2803947		Prochlorococcus_phage(22.22%)	14	NA	NA
WP_000921968.1|989571_990972_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.3	1.1e-10
WP_000273253.1|990964_991771_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_001101908.1|992035_993283_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_000709290.1|993304_994783_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.5	9.2e-77
WP_000238664.1|994797_995364_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
WP_000030822.1|995366_996395_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.1	3.8e-61
WP_000483713.1|996387_997872_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
WP_000032729.1|997850_1000040_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.5	1.1e-139
WP_000666799.1|1000032_1000704_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_000848350.1|1000705_1000969_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174053.1|1000968_1001673_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_001010412.1|1001676_1002801_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000861572.1|1002787_1003270_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_000225837.1|1003470_1004331_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.2	5.3e-40
>prophage 73
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1014727	1018498	2803947		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001074556.1|1014727_1018498_+	bifunctional autolysin	NA	A0A1J0MFB0	Staphylococcus_phage	37.6	1.1e-54
>prophage 74
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1022164	1023148	2803947		Staphylococcus_phage(100.0%)	1	NA	NA
WP_160177719.1|1022164_1023148_+	Glu-specific serine endopeptidase SspA	NA	A0A2H4PQP7	Staphylococcus_phage	32.3	6.0e-16
>prophage 75
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1031454	1031745	2803947		Enterococcus_phage(100.0%)	1	NA	NA
WP_001788574.1|1031454_1031745_+	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	38.0	7.5e-07
>prophage 76
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1036297	1036939	2803947		Planktothrix_phage(100.0%)	1	NA	NA
WP_000571178.1|1036297_1036939_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	2.2e-19
>prophage 77
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1047134	1052345	2803947	protease	Pithovirus(33.33%)	3	NA	NA
WP_000455278.1|1047134_1049459_-|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
WP_000928413.1|1049677_1050481_-	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_001049959.1|1050782_1052345_-	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	4.9e-36
>prophage 78
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1071272	1073081	2803947		Streptococcus_phage(100.0%)	1	NA	NA
WP_000082731.1|1071272_1073081_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.4	9.3e-47
>prophage 79
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1078893	1080863	2803947		Bacillus_virus(100.0%)	2	NA	NA
WP_000427770.1|1078893_1079874_-	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.1	2.7e-16
WP_001067038.1|1079876_1080863_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.4	1.0e-15
>prophage 80
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1084514	1086528	2803947		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
WP_000786734.1|1084514_1085456_-	ATP-binding cassette domain-containing protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	26.9	1.6e-05
WP_000140050.1|1085445_1086528_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.8	8.4e-19
>prophage 81
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1097306	1101933	2803947		Agrobacterium_phage(50.0%)	2	NA	NA
WP_000353955.1|1097306_1099916_-	ATP-dependent chaperone ClpB	NA	A0A223W0B1	Agrobacterium_phage	34.3	5.5e-117
WP_001044214.1|1100118_1101933_-	O-acetyltransferase	NA	B5WZU0	Pseudomonas_phage	33.9	1.1e-36
>prophage 82
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1107050	1110704	2803947		Bacillus_phage(100.0%)	1	NA	NA
WP_000154914.1|1107050_1110704_-	helicase-exonuclease AddAB subunit AddA	NA	A7KV33	Bacillus_phage	24.5	3.5e-24
>prophage 83
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1120858	1127961	2803947		Staphylococcus_phage(33.33%)	6	NA	NA
WP_000185313.1|1120858_1121788_+	glycerophosphodiester phosphodiesterase	NA	A0A220BYK6	Staphylococcus_phage	37.9	2.2e-39
WP_000138487.1|1122234_1123479_-	NAD-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_000167314.1|1123587_1124778_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.7	1.3e-33
WP_000838037.1|1125085_1126213_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_001067294.1|1126574_1126952_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000035058.1|1127367_1127961_-	peptidyl-prolyl cis-trans isomerase	NA	A0A076FI46	Aureococcus_anophage	41.3	1.1e-25
>prophage 84
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1137881	1141509	2803947		Mycoplasma_phage(50.0%)	3	NA	NA
WP_001009697.1|1137881_1139357_-	cytosol aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	34.9	6.9e-48
WP_000046076.1|1139487_1140696_-	NADH dehydrogenase	NA	NA	NA	NA	NA
WP_001143497.1|1141149_1141509_-	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	38.6	2.1e-14
>prophage 85
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1145552	1148221	2803947		Pseudomonas_phage(50.0%)	2	NA	NA
WP_000613541.1|1145552_1146767_-	PG:teichoic acid D-alanyltransferase DltB	NA	A0A125RNP0	Pseudomonas_phage	26.1	8.5e-20
WP_000129653.1|1146763_1148221_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9L3I8	Tupanvirus	28.3	4.4e-39
>prophage 86
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1160328	1208531	2803947	capsid,holin,plate,integrase,head,portal,terminase	Staphylococcus_phage(81.16%)	72	1153022:1153037	1210928:1210943
1153022:1153037	attL	CTTTTGGTAATTCTTT	NA	NA	NA	NA
WP_000382163.1|1160328_1160529_-	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
WP_000139423.1|1160515_1160626_-	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_001788502.1|1160696_1160849_-	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	3.1e-20
WP_064276140.1|1160994_1162407_-	CHAP domain-containing protein	NA	Q9FZY0	Staphylococcus_virus	98.1	1.2e-280
WP_000351119.1|1162393_1162669_-|holin	phage holin	holin	A0A0F6N3M0	Staphylococcus_phage	100.0	8.6e-45
WP_000398862.1|1162724_1163120_-	hypothetical protein	NA	Q4ZBW9	Staphylococcus_virus	100.0	1.6e-68
WP_072529185.1|1163125_1164364_-|plate	BppU family phage baseplate upper protein	plate	A0A0F6N3G7	Staphylococcus_phage	99.0	1.5e-208
WP_001573303.1|1164376_1166251_-	CHAP domain-containing protein	NA	Q9FZY4	Staphylococcus_virus	99.5	0.0e+00
WP_000466777.1|1166387_1166687_-	DUF2951 domain-containing protein	NA	A0A0F6N3M6	Staphylococcus_phage	100.0	9.9e-47
WP_000782200.1|1166726_1166900_-	XkdX family protein	NA	A0A0F6N3L7	Staphylococcus_phage	100.0	6.6e-27
WP_000705896.1|1166903_1167281_-	DUF2977 domain-containing protein	NA	A0A0F6N3G4	Staphylococcus_phage	100.0	1.5e-60
WP_000634521.1|1167280_1169104_-|plate	phage baseplate upper protein	plate	A0A0F6N3G2	Staphylococcus_phage	100.0	0.0e+00
WP_031874266.1|1169103_1171002_-	hypothetical protein	NA	Q4ZBQ2	Staphylococcus_phage	99.2	0.0e+00
WP_001573307.1|1171014_1172901_-	hypothetical protein	NA	Q4ZBQ3	Staphylococcus_phage	99.8	0.0e+00
WP_001652292.1|1172911_1173853_-	hypothetical protein	NA	A0A2H4JFG3	uncultured_Caudovirales_phage	99.0	1.7e-180
WP_001652291.1|1173867_1176753_-	hypothetical protein	NA	A1KXA6	Staphylococcus_virus	90.8	2.1e-274
WP_000880587.1|1176756_1177041_-	hypothetical protein	NA	A0A0N7E0V9	Staphylococcus_phage	100.0	8.8e-45
WP_000134337.1|1177085_1177592_-	hypothetical protein	NA	Q4ZBQ7	Staphylococcus_phage	100.0	2.7e-92
WP_000057583.1|1177658_1178216_-	hypothetical protein	NA	A0A0E3XD60	Staphylococcus_phage	100.0	1.8e-102
WP_000270193.1|1178216_1178642_-	DUF3168 domain-containing protein	NA	Q4ZBQ9	Staphylococcus_phage	97.9	4.0e-73
WP_001652289.1|1178654_1179068_-	HK97 gp10 family phage protein	NA	A0A0N9BAY5	Staphylococcus_phage	97.8	4.5e-74
WP_001652287.1|1179054_1179390_-|head	phage head closure protein	head	Q4ZBR2	Staphylococcus_phage	95.5	1.1e-57
WP_001652286.1|1179401_1179752_-	hypothetical protein	NA	A0A0H3U2R5	Staphylococcus_phage	99.1	4.1e-60
WP_001652285.1|1179912_1180827_-|capsid	phage major capsid protein	capsid	A0A0H3U2U7	Staphylococcus_phage	99.7	3.4e-170
WP_001652284.1|1180843_1181428_-	DUF4355 domain-containing protein	NA	A0A0N7E0U8	Staphylococcus_phage	95.4	4.6e-72
WP_001652283.1|1181523_1182474_-	hypothetical protein	NA	A0A0H3U2Z4	Staphylococcus_phage	97.8	8.9e-174
WP_001652282.1|1182442_1183867_-|portal	phage portal protein	portal	A0A0E3T9I6	Staphylococcus_phage	99.4	3.4e-270
WP_001037578.1|1183863_1185087_-|terminase	PBSX family phage terminase large subunit	terminase	A0A0N9BAX9	Staphylococcus_phage	100.0	7.5e-242
WP_000594088.1|1185079_1185574_-|terminase	terminase	terminase	A0A0N9BAX3	Staphylococcus_phage	100.0	3.4e-84
WP_000286968.1|1185926_1186328_-	hypothetical protein	NA	A0A2H4PQK5	Staphylococcus_phage	100.0	5.6e-69
WP_031925651.1|1186328_1186502_-	transcriptional regulator	NA	Q4ZBK0	Staphylococcus_phage	98.2	3.2e-21
WP_117207534.1|1186498_1186885_-	hypothetical protein	NA	A0A1X9IGZ2	Staphylococcus_phage	99.2	6.8e-64
WP_050958426.1|1186877_1187114_-	hypothetical protein	NA	Q4ZDP0	Staphylococcus_virus	98.7	1.1e-35
WP_001072794.1|1187106_1187310_-	hypothetical protein	NA	B2ZYX5	Staphylococcus_phage	98.5	8.8e-31
WP_031870093.1|1187306_1187513_-	DUF1381 domain-containing protein	NA	Q4ZCV6	Staphylococcus_virus	97.1	9.3e-20
WP_000185680.1|1187549_1188086_-	hypothetical protein	NA	A0A1P8L6E0	Staphylococcus_phage	100.0	2.1e-95
WP_001065072.1|1188078_1188327_-	DUF1024 family protein	NA	Q9B0F3	Staphylococcus_virus	98.8	7.0e-38
WP_160177721.1|1188319_1188709_-	acetyltransferase	NA	I1W604	Staphylococcus_phage	78.3	9.6e-50
WP_031764468.1|1188705_1189053_-	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	99.1	2.2e-58
WP_160177722.1|1189240_1189645_-	hypothetical protein	NA	A0A0E3T8H9	Staphylococcus_phage	97.0	3.9e-70
WP_000693989.1|1189647_1189854_-	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	100.0	3.0e-34
WP_160177723.1|1189867_1190110_-	hypothetical protein	NA	Q4ZDP7	Staphylococcus_virus	95.0	2.1e-39
WP_000029369.1|1190113_1190470_-	hypothetical protein	NA	A0A2I6PDX2	Staphylococcus_phage	99.2	3.2e-60
WP_001187234.1|1190470_1190656_-	DUF3113 family protein	NA	A0A1W6JPY2	Staphylococcus_phage	100.0	8.3e-28
WP_031836910.1|1190655_1191063_-	RusA family crossover junction endodeoxyribonuclease	NA	A9CR74	Staphylococcus_phage	97.8	4.2e-72
WP_001123674.1|1191072_1191294_-	DUF3269 family protein	NA	A0A1W6JQ35	Staphylococcus_phage	100.0	1.7e-35
WP_031836909.1|1191306_1191465_-	hypothetical protein	NA	A0A2I6PDX0	Staphylococcus_phage	94.2	2.2e-21
WP_053870612.1|1191458_1192232_-	ATP-binding protein	NA	A0A2H4PQI3	Staphylococcus_phage	98.4	3.3e-142
WP_000190224.1|1192241_1193012_-	hypothetical protein	NA	W5R8N2	Staphylococcus_phage	100.0	1.4e-116
WP_000371250.1|1193076_1193934_+	DUF4393 domain-containing protein	NA	Q4ZBL8	Staphylococcus_phage	100.0	9.5e-159
WP_015977703.1|1194039_1194714_-	DUF968 domain-containing protein	NA	Q4ZD97	Staphylococcus_virus	100.0	2.8e-129
WP_001004506.1|1194714_1195266_-	HNH endonuclease	NA	A0A2H4PQR4	Staphylococcus_phage	100.0	1.6e-106
WP_015978401.1|1195276_1195702_-	single-stranded DNA-binding protein	NA	A0A2H4PQQ4	Staphylococcus_phage	100.0	8.8e-65
WP_000139720.1|1195701_1196325_-	DUF1071 domain-containing protein	NA	A0A2H4PQQ6	Staphylococcus_phage	100.0	1.4e-114
WP_160177724.1|1196317_1196539_-	DUF2483 domain-containing protein	NA	A0A2H4PQR5	Staphylococcus_phage	98.6	9.3e-34
WP_000291089.1|1196548_1196809_-	DUF1108 family protein	NA	Q4ZBM7	Staphylococcus_phage	100.0	1.2e-43
WP_000066021.1|1196900_1197062_-	DUF1270 family protein	NA	Q4ZBM9	Staphylococcus_phage	100.0	3.8e-21
WP_000977381.1|1197054_1197276_-	hypothetical protein	NA	A0A0F6N3I2	Staphylococcus_phage	100.0	1.5e-31
WP_000395457.1|1197346_1197577_+	hypothetical protein	NA	R4IG40	Staphylococcus_phage	100.0	2.3e-35
WP_001148857.1|1197758_1197953_-	hypothetical protein	NA	A0A1X9H0A2	Staphylococcus_phage	98.4	3.3e-19
WP_001002758.1|1197969_1198734_-	phage antirepressor Ant	NA	R4IFK0	Staphylococcus_phage	99.6	2.1e-141
WP_000108122.1|1198733_1198928_-	helix-turn-helix transcriptional regulator	NA	A0A0F6N3M9	Staphylococcus_phage	100.0	1.1e-25
WP_001055143.1|1199190_1199523_+	helix-turn-helix transcriptional regulator	NA	R4IH08	Staphylococcus_phage	100.0	4.1e-57
WP_000775187.1|1199539_1200214_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0F6N3H6	Staphylococcus_phage	100.0	4.9e-126
WP_000661437.1|1200241_1200967_+	hypothetical protein	NA	A0A0F6N4L7	Staphylococcus_phage	100.0	9.9e-125
WP_000392109.1|1200998_1201679_+	hypothetical protein	NA	A0A2H4PQQ5	Staphylococcus_phage	100.0	5.1e-123
WP_070854174.1|1201889_1202939_+|integrase	site-specific integrase	integrase	A1KWY3	Staphylococcus_virus	99.7	4.5e-203
WP_001074405.1|1203006_1204404_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_001010508.1|1204554_1205019_-	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_000807671.1|1205008_1206250_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.5	1.1e-110
WP_000205572.1|1206364_1207672_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_000168845.1|1207769_1208531_-	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
1210928:1210943	attR	CTTTTGGTAATTCTTT	NA	NA	NA	NA
>prophage 87
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1212017	1213043	2803947		Bacillus_virus(100.0%)	1	NA	NA
WP_000571218.1|1212017_1213043_-	methionine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	3.9e-26
>prophage 88
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1216304	1221481	2803947		Streptococcus_phage(50.0%)	8	NA	NA
WP_000589549.1|1216304_1216661_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	46.6	4.7e-19
WP_001190695.1|1216804_1217125_+	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	36.4	3.1e-06
WP_000422909.1|1217274_1217814_-	nitroreductase	NA	NA	NA	NA	NA
WP_000150017.1|1217896_1218613_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	30.6	3.0e-17
WP_000974460.1|1218760_1219183_+	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_000569884.1|1219581_1220076_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000255561.1|1220230_1220848_+	amino acid transporter	NA	NA	NA	NA	NA
WP_001802951.1|1220920_1221481_-	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	40.4	3.8e-31
>prophage 89
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1224885	1226129	2803947		Lactococcus_phage(50.0%)	2	NA	NA
WP_001059082.1|1224885_1225086_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	70.8	1.4e-20
WP_001548082.1|1225442_1226129_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	54.2	3.8e-33
>prophage 90
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1235236	1244114	2803947		Staphylococcus_phage(50.0%)	9	NA	NA
WP_000757406.1|1235236_1235965_+	DUF5067 domain-containing protein	NA	H9A0X8	Staphylococcus_phage	37.5	1.3e-18
WP_001057759.1|1236156_1236303_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001058299.1|1236318_1236642_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001085185.1|1237963_1238428_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	100.0	1.5e-81
WP_001050064.1|1238449_1240822_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	39.2	2.7e-94
WP_001165952.1|1240855_1241596_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_000556760.1|1241711_1241945_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_000785252.1|1242011_1242470_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001121761.1|1242809_1244114_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	80.7	6.7e-196
>prophage 91
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1253288	1259164	2803947		Streptococcus_phage(40.0%)	5	NA	NA
WP_001049165.1|1253288_1253876_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.3	8.2e-53
WP_000006551.1|1254449_1255394_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.6	3.1e-54
WP_001248939.1|1255503_1256499_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	41.9	4.8e-53
WP_000369722.1|1256495_1257407_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	36.1	1.1e-08
WP_000134963.1|1258228_1259164_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.2	2.9e-84
>prophage 92
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1263554	1266401	2803947		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_000662681.1|1263554_1266401_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	57.1	0.0e+00
>prophage 93
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1269719	1270559	2803947		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000749380.1|1269719_1270559_-	CHAP domain-containing protein	NA	A0A2H4J675	uncultured_Caudovirales_phage	42.2	3.5e-12
>prophage 94
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1276637	1282348	2803947		Streptococcus_phage(66.67%)	5	NA	NA
WP_001548033.1|1276637_1277720_-	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	35.2	1.3e-43
WP_000686342.1|1278083_1278950_-	DegV family protein	NA	NA	NA	NA	NA
WP_000192947.1|1279093_1279735_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	48.3	4.0e-37
WP_000258151.1|1279904_1280960_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
WP_000460983.1|1281277_1282348_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.5	1.3e-16
>prophage 95
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1291630	1315194	2803947		uncultured_Caudovirales_phage(35.71%)	19	NA	NA
WP_000616842.1|1291630_1292392_-	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
WP_001245577.1|1292388_1293345_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000876318.1|1293331_1294303_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_000499195.1|1294341_1294497_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000562498.1|1295010_1295982_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000855505.1|1296099_1298205_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000692521.1|1298167_1298566_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_001068497.1|1299366_1300233_+	DMT family transporter	NA	NA	NA	NA	NA
WP_000930014.1|1300252_1300753_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_000193751.1|1301093_1302599_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_001790641.1|1302676_1302778_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000429014.1|1302868_1303786_+	lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
WP_000197271.1|1304409_1304952_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000663030.1|1305302_1306361_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000180991.1|1306600_1308115_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_160177727.1|1308107_1309085_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.3	4.2e-25
WP_000983677.1|1309306_1311088_-	DNA helicase RecQ	NA	A0A2P1EM61	Moumouvirus	37.0	6.5e-77
WP_000525109.1|1311099_1312983_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.8	1.1e-55
WP_031871753.1|1313253_1315194_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	39.5	1.7e-110
>prophage 96
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1318333	1328179	2803947		Pandoravirus(12.5%)	12	NA	NA
WP_001217785.1|1318333_1319485_-	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
WP_000604514.1|1319468_1320062_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_000446724.1|1320412_1321081_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000941336.1|1321082_1321502_+	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_001062972.1|1321505_1322219_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_050961466.1|1322317_1322902_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001093553.1|1323181_1323622_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001037807.1|1323963_1324437_+	DoxX family protein	NA	NA	NA	NA	NA
WP_000149344.1|1324411_1325098_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000244412.1|1325097_1326153_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
WP_000702782.1|1326224_1327208_-	glycosyltransferase family 2 protein	NA	A0A192Y8W7	Salmonella_phage	43.3	1.5e-62
WP_000931237.1|1327339_1328179_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	42.3	5.1e-56
>prophage 97
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1339791	1341165	2803947		Bandra_megavirus(100.0%)	1	NA	NA
WP_000952048.1|1339791_1341165_-	deoxyribodipyrimidine photo-lyase	NA	A0A2K9V7Z5	Bandra_megavirus	29.2	5.6e-44
>prophage 98
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1346142	1352422	2803947		Bacillus_phage(33.33%)	6	NA	NA
WP_000857602.1|1346142_1347816_-	amino acid ABC transporter ATP-binding/permease protein	NA	W8CYL7	Bacillus_phage	22.9	4.5e-11
WP_000737143.1|1347812_1349444_-	ABC transporter ATP-binding protein/permease	NA	W5SAS9	Pithovirus	27.8	6.7e-12
WP_000469890.1|1349662_1350538_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000358498.1|1350709_1351393_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000148828.1|1351395_1351854_+	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_000820892.1|1351855_1352422_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	36.9	6.1e-21
>prophage 99
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1359350	1359824	2803947		Pandoravirus(100.0%)	1	NA	NA
WP_000833483.1|1359350_1359824_-	cupin	NA	A0A291AU44	Pandoravirus	39.4	2.1e-14
>prophage 100
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1365085	1365883	2803947		Bacillus_phage(100.0%)	1	NA	NA
WP_000731644.1|1365085_1365883_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A223LD43	Bacillus_phage	30.2	1.2e-06
>prophage 101
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1370714	1371476	2803947		Planktothrix_phage(100.0%)	1	NA	NA
WP_000985996.1|1370714_1371476_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	7.2e-33
>prophage 102
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1375850	1376894	2803947		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_001030771.1|1375850_1376894_-	alpha/beta hydrolase	NA	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	26.6	2.0e-17
>prophage 103
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1383416	1384214	2803947		Planktothrix_phage(100.0%)	1	NA	NA
WP_001080809.1|1383416_1384214_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.7	1.1e-18
>prophage 104
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1387441	1391400	2803947		Bacillus_phage(33.33%)	3	NA	NA
WP_000817954.1|1387441_1389169_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	43.3	9.7e-110
WP_000793070.1|1389589_1390885_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	26.9	2.0e-14
WP_000832260.1|1391001_1391400_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	39.9	3.2e-16
>prophage 105
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1398334	1399078	2803947		Indivirus(100.0%)	1	NA	NA
WP_000894471.1|1398334_1399078_+	metal ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.7	8.9e-12
>prophage 106
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1410229	1410790	2803947	integrase	Streptococcus_phage(100.0%)	1	1404383:1404397	1414379:1414393
1404383:1404397	attL	TTTTGATACCATTTC	NA	NA	NA	NA
WP_001044915.1|1410229_1410790_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
WP_001044915.1|1410229_1410790_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A141E172	Streptococcus_phage	35.1	5.7e-19
1414379:1414393	attR	TTTTGATACCATTTC	NA	NA	NA	NA
>prophage 107
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1423860	1427214	2803947		Tupanvirus(50.0%)	3	NA	NA
WP_001200748.1|1423860_1424871_-	alcohol dehydrogenase AdhP	NA	A0A2K9L339	Tupanvirus	27.3	5.6e-33
WP_001788287.1|1425369_1425891_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000180230.1|1425918_1427214_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.9	2.1e-24
>prophage 108
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1440764	1442087	2803947		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_000860581.1|1440764_1442087_+	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	47.3	2.8e-109
>prophage 109
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1453392	1454049	2803947		Elephant_endotheliotropic_herpesvirus(100.0%)	1	NA	NA
WP_000455256.1|1453392_1454049_-	uracil-DNA glycosylase	NA	U5U4C1	Elephant_endotheliotropic_herpesvirus	46.4	1.1e-45
>prophage 110
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1457690	1461011	2803947		Staphylococcus_phage(50.0%)	2	NA	NA
WP_001100835.1|1457690_1459067_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	24.5	3.9e-21
WP_160177731.1|1459610_1461011_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	32.5	3.6e-54
>prophage 111
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1484378	1485041	2803947		Enterococcus_phage(100.0%)	1	NA	NA
WP_001067262.1|1484378_1485041_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	37.4	1.4e-24
>prophage 112
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1491620	1492808	2803947		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_000250827.1|1491620_1492808_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	30.8	3.4e-45
>prophage 113
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1495836	1506790	2803947		Streptococcus_phage(33.33%)	6	NA	NA
WP_000090315.1|1495836_1497918_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	28.3	2.7e-66
WP_001137495.1|1498040_1498511_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_001142337.1|1498576_1498990_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_000031892.1|1499087_1499342_-	50S ribosomal protein L7ae-like protein	NA	NA	NA	NA	NA
WP_001788197.1|1499478_1503075_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.6	3.3e-67
WP_000918667.1|1503238_1506790_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	24.3	2.1e-50
>prophage 114
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1510473	1515256	2803947	tRNA	Bacillus_virus(50.0%)	8	NA	NA
WP_001288302.1|1510473_1511022_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	33.5	8.6e-12
WP_001074474.1|1511034_1511217_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_001788193.1|1511272_1511416_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_000872873.1|1511530_1512100_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_000664738.1|1512180_1512705_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_050958313.1|1512704_1513451_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000370182.1|1513458_1513863_-	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_000631963.1|1513855_1515256_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	32.0	3.2e-55
>prophage 115
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1521267	1523724	2803947	protease	Escherichia_phage(100.0%)	1	NA	NA
WP_000897132.1|1521267_1523724_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpC	protease	A0A1C3S747	Escherichia_phage	41.2	1.4e-133
>prophage 116
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1542532	1552804	2803947	tRNA	Catovirus(16.67%)	10	NA	NA
WP_001288202.1|1542532_1544020_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	41.1	2.1e-92
WP_001790128.1|1544072_1544165_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000613716.1|1544558_1545035_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_001154302.1|1545031_1545397_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_000167924.1|1545374_1546178_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	29.3	1.3e-21
WP_000057594.1|1546393_1547326_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	65.7	3.7e-108
WP_000148605.1|1547504_1548386_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_001167887.1|1548614_1550708_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	E5EQ50	Micromonas_sp._RCC1109_virus	42.7	4.0e-110
WP_000551283.1|1550964_1551504_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.8	6.5e-12
WP_001176715.1|1551508_1552804_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	A0A1V0SI91	Klosneuvirus	24.5	4.8e-13
>prophage 117
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1562060	1564525	2803947		Hokovirus(50.0%)	2	NA	NA
WP_000933774.1|1562060_1563026_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.4	6.1e-45
WP_001252529.1|1563172_1564525_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	30.4	8.3e-24
>prophage 118
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1570409	1573507	2803947	tRNA	Klosneuvirus(50.0%)	2	NA	NA
WP_001051127.1|1570409_1572383_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	36.2	1.9e-93
WP_000279926.1|1572667_1573507_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	45.8	2.7e-57
>prophage 119
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1577413	1578031	2803947		Streptococcus_phage(100.0%)	1	NA	NA
WP_001272126.1|1577413_1578031_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	48.3	9.2e-47
>prophage 120
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1586886	1588584	2803947		Streptococcus_virus(100.0%)	1	NA	NA
WP_001109047.1|1586886_1588584_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	42.3	1.9e-54
>prophage 121
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1605230	1611468	2803947		Lactobacillus_phage(33.33%)	6	NA	NA
WP_001170264.1|1605230_1606235_-	autolysin/adhesin Aaa	NA	A0A0A7NU10	Lactobacillus_phage	41.2	1.6e-24
WP_000825521.1|1606566_1607409_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA	NA
WP_000467994.1|1607445_1608105_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569286.1|1608108_1609134_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	8.2e-32
WP_001036663.1|1609427_1610570_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA	NA
WP_000634105.1|1610553_1611468_-	cysteine synthase family protein	NA	A0A1W6JIM2	Lactococcus_phage	39.7	6.6e-49
>prophage 122
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1637657	1640418	2803947		Staphylococcus_phage(100.0%)	2	NA	NA
WP_000072584.1|1637657_1638869_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	35.2	2.2e-44
WP_000028628.1|1638861_1640418_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.2	6.8e-288
>prophage 123
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1654109	1659559	2803947	transposase	Paenibacillus_phage(25.0%)	5	NA	NA
WP_000159787.1|1654109_1654382_+|transposase	transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	50.6	1.3e-13
WP_000041883.1|1654780_1655485_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	U5U4R0	Staphylococcus_phage	37.6	2.6e-29
WP_000551776.1|1655877_1656414_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424966.1|1656526_1658068_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
WP_000264071.1|1658092_1659559_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
>prophage 124
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1668597	1670121	2803947		Enterococcus_phage(100.0%)	1	NA	NA
WP_000930486.1|1668597_1670121_+	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	33.6	1.9e-40
>prophage 125
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1676314	1684733	2803947	integrase	Staphylococcus_phage(66.67%)	12	1673259:1673273	1695612:1695626
1673259:1673273	attL	AGTAGTAATTGAATA	NA	NA	NA	NA
WP_000237577.1|1676314_1676473_+|integrase	integrase	integrase	Q4ZE80	Staphylococcus_phage	66.7	6.7e-10
WP_001797636.1|1676550_1676862_+|integrase	tyrosine-type recombinase/integrase	integrase	Q4ZE80	Staphylococcus_phage	70.5	5.5e-24
WP_001822249.1|1676900_1677839_+	Abi family protein	NA	NA	NA	NA	NA
WP_000897044.1|1678104_1678347_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_000934799.1|1678398_1678902_-	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
WP_001261460.1|1678922_1679219_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_001052483.1|1679462_1679654_+	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	80.0	4.9e-23
WP_001218732.1|1679739_1680837_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_000157345.1|1680848_1681052_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_001077602.1|1681081_1681963_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_001550052.1|1682119_1682965_-	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHW0	Gordonia_phage	34.4	1.6e-12
WP_000655692.1|1683629_1684733_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	28.0	3.9e-11
1695612:1695626	attR	AGTAGTAATTGAATA	NA	NA	NA	NA
>prophage 126
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1694651	1695494	2803947		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_000209565.1|1694651_1695494_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.2	7.7e-12
>prophage 127
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1716739	1719474	2803947		Bodo_saltans_virus(50.0%)	3	NA	NA
WP_000280803.1|1716739_1717762_-	lipoate--protein ligase	NA	A0A2H4UVX5	Bodo_saltans_virus	29.7	1.1e-09
WP_001191946.1|1717739_1718684_-	NAD-dependent deacetylase	NA	NA	NA	NA	NA
WP_000449061.1|1718673_1719474_-	protein-ADP-ribose hydrolase	NA	A0A2K9L8X2	Tupanvirus	43.4	7.5e-41
>prophage 128
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1737705	1738383	2803947		Planktothrix_phage(100.0%)	1	NA	NA
WP_000911019.1|1737705_1738383_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	9.2e-32
>prophage 129
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1756036	1760476	2803947		Mycobacterium_phage(100.0%)	1	NA	NA
WP_000549277.1|1756036_1760476_-	type VII secretion protein EssC	NA	V5UPA0	Mycobacterium_phage	24.3	8.2e-28
>prophage 130
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1772438	1774100	2803947		Amsacta_moorei_entomopoxvirus(50.0%)	2	NA	NA
WP_000570071.1|1772438_1773098_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	37.2	7.6e-23
WP_000736798.1|1773149_1774100_-	glycine-glycine endopeptidase LytM	NA	V5R8R0	Arthrobacter_phage	42.7	1.5e-16
>prophage 131
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1783335	1784772	2803947		Pandoravirus(100.0%)	1	NA	NA
WP_000163988.1|1783335_1784772_-	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	25.8	3.7e-30
>prophage 132
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1788532	1793072	2803947		Enterobacteria_phage(50.0%)	3	NA	NA
WP_000925394.1|1788532_1790272_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	31.5	1.5e-62
WP_050958262.1|1790533_1791208_-	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA	NA
WP_000975357.1|1791347_1793072_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	37.4	2.1e-11
>prophage 133
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1802399	1803443	2803947		Synechococcus_phage(100.0%)	1	NA	NA
WP_000645604.1|1802399_1803443_-	galactitol-1-phosphate 5-dehydrogenase	NA	E3SJ82	Synechococcus_phage	24.6	4.6e-14
>prophage 134
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1810658	1812188	2803947		Vibrio_phage(100.0%)	1	NA	NA
WP_000838204.1|1810658_1812188_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	52.0	5.3e-11
>prophage 135
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1821063	1822569	2803947		Staphylococcus_phage(100.0%)	1	NA	NA
WP_001008401.1|1821063_1822569_+	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.9	3.5e-39
>prophage 136
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1833641	1839000	2803947		Tetraselmis_virus(50.0%)	3	NA	NA
WP_000894660.1|1833641_1835891_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	45.1	1.7e-186
WP_000837105.1|1836478_1837447_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_000127982.1|1837443_1839000_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	27.2	5.8e-13
>prophage 137
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1849210	1851269	2803947		Planktothrix_phage(50.0%)	2	NA	NA
WP_000818914.1|1849210_1850308_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.6	1.4e-24
WP_000166917.1|1850690_1851269_-	M23 family metallopeptidase	NA	A0A2K9VGT1	Pontimonas_phage	39.4	9.7e-14
>prophage 138
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1859804	1861397	2803947		Bacillus_virus(100.0%)	1	NA	NA
WP_000067349.1|1859804_1861397_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.6	6.4e-15
>prophage 139
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1879557	1880742	2803947		Klosneuvirus(100.0%)	1	NA	NA
WP_001084436.1|1879557_1880742_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	29.2	9.2e-35
>prophage 140
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1885578	1895862	2803947		Tupanvirus(50.0%)	3	NA	NA
WP_000605282.1|1885578_1892754_-	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	29.5	1.0e-67
WP_000826862.1|1893200_1894451_-	MFS transporter	NA	NA	NA	NA	NA
WP_000706137.1|1894836_1895862_-	NAD-dependent formate dehydrogenase	NA	A0A1V0SBV6	Catovirus	33.9	2.9e-29
>prophage 141
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1899403	1902401	2803947		Bacillus_virus(50.0%)	4	NA	NA
WP_160177736.1|1899403_1900144_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.6	1.9e-38
WP_000171919.1|1900485_1900998_-	DUF4242 domain-containing protein	NA	NA	NA	NA	NA
WP_000356963.1|1901176_1901380_+	hypothetical protein	NA	NA	NA	NA	NA
WP_160177737.1|1901441_1902401_-	cation transporter	NA	A0A1V0SED0	Indivirus	34.9	3.0e-12
>prophage 142
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1905741	1908226	2803947		Catovirus(50.0%)	2	NA	NA
WP_000723454.1|1905741_1906887_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	26.4	2.4e-24
WP_000779497.1|1906963_1908226_-	nucleotide sugar dehydrogenase	NA	A0A127AXI2	Bacillus_phage	26.0	6.6e-23
>prophage 143
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1915061	1921627	2803947		Klosneuvirus(33.33%)	5	NA	NA
WP_000413173.1|1915061_1916186_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	59.8	2.3e-128
WP_001028293.1|1916189_1917299_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA	NA
WP_000459054.1|1917311_1918340_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	35.0	3.3e-41
WP_000565302.1|1920173_1920938_-	tyrosine-protein phosphatase	NA	NA	NA	NA	NA
WP_000037332.1|1920940_1921627_-	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	36.1	3.7e-28
>prophage 144
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1932908	1933682	2803947		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000078092.1|1932908_1933682_+	phosphonate ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.1	3.8e-13
>prophage 145
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1941717	1942317	2803947		Bacillus_thuringiensis_phage(100.0%)	1	NA	NA
WP_000874681.1|1941717_1942317_-	Superoxide dismutase [Mn/Fe] 2	NA	Q56AR7	Bacillus_thuringiensis_phage	50.2	7.6e-54
>prophage 146
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1947254	1948235	2803947		Catovirus(100.0%)	1	NA	NA
WP_001789408.1|1947254_1948235_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SAI6	Catovirus	37.0	1.0e-47
>prophage 147
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1951605	1952808	2803947		Tupanvirus(100.0%)	1	NA	NA
WP_001223700.1|1951605_1952808_-	staphyloferrin B biosynthesis decarboxylase SbnH	NA	A0A2K9L4I2	Tupanvirus	20.8	1.1e-08
>prophage 148
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	1961074	1965284	2803947		Lactococcus_phage(50.0%)	4	NA	NA
WP_000570808.1|1961074_1962055_-	2,3-diaminopropionate biosynthesis protein SbnA	NA	A0A1W6JHY1	Lactococcus_phage	35.6	2.1e-40
WP_001045111.1|1962285_1963278_+	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA	NA
WP_000924997.1|1963293_1964289_+	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA	NA
WP_000136636.1|1964285_1965284_+	staphyloferrin B ABC transporter permease subunit SirC	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.5	1.2e-14
>prophage 149
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2001507	2002575	2803947		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000816129.1|2001507_2002575_-	persulfide response sulfurtransferase CstA	NA	A0A2H4PQR9	Staphylococcus_phage	41.5	3.5e-09
>prophage 150
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2010169	2020181	2803947		Bacillus_phage(40.0%)	7	NA	NA
WP_000088648.1|2010169_2010970_-	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	35.9	4.6e-38
WP_001104172.1|2011359_2012148_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001060131.1|2012148_2013483_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000871607.1|2013475_2015302_-	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	31.3	1.6e-30
WP_000101976.1|2015314_2016016_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.2	3.5e-42
WP_000095327.1|2017219_2018503_-	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.6	2.3e-68
WP_000375647.1|2018780_2020181_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.1	5.4e-111
>prophage 151
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2026868	2035907	2803947	tRNA	Bacillus_virus(50.0%)	5	NA	NA
WP_000884334.1|2026868_2028155_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.2	2.7e-88
WP_000177464.1|2028533_2030048_-	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	38.6	6.8e-91
WP_000449218.1|2030373_2031186_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_000819088.1|2031272_2033936_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	35.9	1.6e-119
WP_000255586.1|2033972_2035907_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.9	5.7e-143
>prophage 152
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2045989	2049249	2803947		Faecalibacterium_phage(33.33%)	5	NA	NA
WP_000742837.1|2045989_2046829_+	nucleoid occlusion protein	NA	A0A2K9V477	Faecalibacterium_phage	23.8	2.2e-06
WP_000491382.1|2047281_2047635_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_078091732.1|2047727_2048099_+	DUF3147 family protein	NA	NA	NA	NA	NA
WP_001054118.1|2048352_2048922_+	helix-turn-helix domain-containing protein	NA	D2XQ11	Bacillus_virus	33.3	6.2e-05
WP_001059079.1|2049048_2049249_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	69.8	3.4e-19
>prophage 153
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2053331	2054090	2803947		Planktothrix_phage(100.0%)	1	NA	NA
WP_000154162.1|2053331_2054090_-	peptide resistance ABC transporter ATP-binding subunit VraD	NA	G9BWD6	Planktothrix_phage	39.5	9.0e-36
>prophage 154
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2068347	2070060	2803947		Planktothrix_phage(100.0%)	1	NA	NA
WP_160177739.1|2068347_2070060_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.8	3.2e-20
>prophage 155
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2075689	2076703	2803947		Faustovirus(100.0%)	1	NA	NA
WP_000639183.1|2075689_2076703_+	histidinol-phosphate aminotransferase family protein	NA	A0A1X7QHI1	Faustovirus	22.2	2.1e-08
>prophage 156
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2089154	2089847	2803947		Streptococcus_phage(100.0%)	1	NA	NA
WP_000185864.1|2089154_2089847_+	polysaccharide biosynthesis tyrosine autokinase	NA	A0A1X9I5D6	Streptococcus_phage	38.0	1.7e-28
>prophage 157
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2115948	2117808	2803947		Enterococcus_phage(100.0%)	1	NA	NA
WP_001125610.1|2115948_2117808_-	amidase domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	37.3	9.7e-15
>prophage 158
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2143522	2145273	2803947		Ectocarpus_siliculosus_virus(50.0%)	2	NA	NA
WP_000143419.1|2143522_2144410_+	sensor histidine kinase	NA	Q8QNA2	Ectocarpus_siliculosus_virus	22.5	2.5e-05
WP_000923760.1|2144517_2145273_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.9	3.0e-31
>prophage 159
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2148693	2149191	2803947		Canarypox_virus(100.0%)	1	NA	NA
WP_001065268.1|2148693_2149191_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	33.1	1.8e-21
>prophage 160
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2154243	2156627	2803947		Enterococcus_phage(100.0%)	2	NA	NA
WP_001071717.1|2154243_2156094_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	64.3	1.2e-235
WP_000601724.1|2156090_2156627_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	49.4	8.6e-41
>prophage 161
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2162472	2172586	2803947	holin	Klosneuvirus(50.0%)	9	NA	NA
WP_000066521.1|2162472_2164182_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	32.3	3.8e-58
WP_000011688.1|2164459_2164672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000708242.1|2164952_2165396_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_001172340.1|2165589_2167188_+	acetyl-CoA synthetase	NA	A0A2H4PQU7	Staphylococcus_phage	36.8	5.3e-78
WP_001791775.1|2167247_2167577_-	hypothetical protein	NA	NA	NA	NA	NA
WP_160177741.1|2167872_2169369_+	malate dehydrogenase (quinone)	NA	NA	NA	NA	NA
WP_001031413.1|2169561_2170452_-	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	28.6	1.0e-06
WP_001237629.1|2170574_2170991_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000030057.1|2171248_2172586_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	26.7	1.0e-18
>prophage 162
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2200722	2204511	2803947		Staphylococcus_phage(50.0%)	3	NA	NA
WP_000751267.1|2200722_2201424_+	lytic transglycosylase IsaA	NA	Q4Z8Z7	Staphylococcus_phage	46.4	4.0e-38
WP_000996736.1|2201699_2202188_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000379821.1|2202699_2204511_+	O-acetyltransferase OatA	NA	A0A1R3Y5Q6	Salmonella_virus	31.5	1.3e-35
>prophage 163
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2212944	2216927	2803947		Paramecium_bursaria_Chlorella_virus(50.0%)	3	NA	NA
WP_000161358.1|2212944_2213943_+	D-lactate dehydrogenase	NA	M1H502	Paramecium_bursaria_Chlorella_virus	33.0	1.2e-35
WP_000076661.1|2214032_2214239_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_160177743.1|2214518_2216927_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	41.0	4.9e-128
>prophage 164
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2226168	2229204	2803947	protease	Enterobacteria_phage(50.0%)	2	NA	NA
WP_001058981.1|2226168_2228274_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	38.5	3.1e-118
WP_000455987.1|2228682_2229204_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	41.1	2.0e-26
>prophage 165
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2237086	2243470	2803947		Yellowstone_lake_phycodnavirus(33.33%)	4	NA	NA
WP_001062658.1|2237086_2238826_+	pyruvate oxidase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.3	2.7e-35
WP_000473675.1|2239126_2241193_+	PTS glucoside EIICBA component	NA	A0A2I7SAJ6	Vibrio_phage	43.3	8.3e-07
WP_000240662.1|2242024_2242369_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001228162.1|2242501_2243470_+	alpha/beta hydrolase	NA	A0A167RJ59	Powai_lake_megavirus	26.5	5.2e-12
>prophage 166
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2253056	2254049	2803947		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_000161536.1|2253056_2254049_-	D-lactate dehydrogenase	NA	M1HYB0	Acanthocystis_turfacea_Chlorella_virus	31.5	1.1e-36
>prophage 167
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2263329	2264025	2803947		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000382904.1|2263329_2264025_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	38.0	3.0e-38
>prophage 168
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2284407	2285274	2803947		Bacillus_phage(100.0%)	1	NA	NA
WP_000721336.1|2284407_2285274_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	52.6	1.3e-78
>prophage 169
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2293086	2298268	2803947		Streptococcus_phage(50.0%)	3	NA	NA
WP_000356881.1|2293086_2294724_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	38.1	1.7e-95
WP_000755954.1|2295012_2295405_+	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_000088722.1|2295406_2298268_+	DUF3427 domain-containing protein	NA	Q5YA94	Bacillus_phage	27.9	2.4e-28
>prophage 170
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2305092	2305788	2803947		Bacillus_phage(100.0%)	1	NA	NA
WP_000217466.1|2305092_2305788_+	oxidoreductase	NA	W8CYX9	Bacillus_phage	36.5	8.6e-09
>prophage 171
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2319149	2320707	2803947		Planktothrix_phage(50.0%)	2	NA	NA
WP_000173869.1|2319149_2319965_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.3	1.8e-13
WP_000590517.1|2319957_2320707_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.8	3.1e-20
>prophage 172
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2327841	2332270	2803947		Organic_Lake_phycodnavirus(50.0%)	4	NA	NA
WP_000923520.1|2327841_2328504_+	ATP-binding cassette domain-containing protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	32.2	6.5e-22
WP_000072147.1|2328496_2329273_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_001802848.1|2329677_2330856_+	MFS transporter	NA	NA	NA	NA	NA
WP_000700921.1|2330917_2332270_-	carboxylesterase/lipase family protein	NA	A0A0B5J865	Pandoravirus	34.2	2.5e-12
>prophage 173
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2335963	2337822	2803947		Mycoplasma_phage(50.0%)	2	NA	NA
WP_000948975.1|2335963_2337190_+	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	50.5	6.6e-20
WP_000569120.1|2337186_2337822_+	ABC transporter permease	NA	G3M9Y4	Bacillus_virus	26.2	9.0e-05
>prophage 174
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2355549	2361736	2803947		Bacillus_phage(66.67%)	5	NA	NA
WP_001176863.1|2355549_2356692_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	44.3	5.3e-56
WP_000779358.1|2356959_2357346_+	GtrA family protein	NA	NA	NA	NA	NA
WP_000482650.1|2357479_2357587_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_001064838.1|2358214_2359978_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	24.9	1.5e-36
WP_000486494.1|2360002_2361736_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.7	9.0e-31
>prophage 175
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2365196	2370968	2803947		Staphylococcus_phage(75.0%)	6	NA	NA
WP_000671751.1|2365196_2366312_+	pyridoxal phosphate-dependent aminotransferase family protein	NA	V5LQ39	Emiliania_huxleyi_virus	24.7	1.6e-20
WP_000286875.1|2366322_2367015_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA	NA
WP_000200948.1|2367025_2367493_+	QueT transporter family protein	NA	NA	NA	NA	NA
WP_000783428.1|2367544_2368522_-	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	NA	A0A2H4PQH7	Staphylococcus_phage	76.2	7.1e-142
WP_000916713.1|2368523_2369471_-	bi-component gamma-hemolysin HlgCB subunit C	NA	A0A2I6PER8	Staphylococcus_phage	77.1	1.2e-138
WP_000594519.1|2370038_2370968_-	bi-component gamma-hemolysin HlgAB subunit A	NA	A0A2H4PQI5	Staphylococcus_phage	71.1	3.2e-120
>prophage 176
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2378912	2379644	2803947		Bacillus_virus(100.0%)	1	NA	NA
WP_000615461.1|2378912_2379644_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.7	4.1e-25
>prophage 177
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2396295	2397855	2803947		Escherichia_phage(100.0%)	1	NA	NA
WP_000692645.1|2396295_2397855_+	nitrate reductase subunit beta	NA	A0A077SL61	Escherichia_phage	46.8	4.4e-21
>prophage 178
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2419273	2420308	2803947		Bacillus_virus(100.0%)	1	NA	NA
WP_000655971.1|2419273_2420308_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	26.6	5.8e-17
>prophage 179
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2430152	2434049	2803947		Hokovirus(33.33%)	4	NA	NA
WP_000477329.1|2430152_2431526_-	heme sensor histidine kinase HssS	NA	A0A1V0SGX0	Hokovirus	29.8	1.3e-13
WP_000249497.1|2431518_2432193_-	DNA-binding heme response regulator HssR	NA	W8CYM9	Bacillus_phage	45.2	3.6e-52
WP_050958277.1|2432328_2433384_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001229911.1|2433383_2434049_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.8	1.2e-36
>prophage 180
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2438627	2439836	2803947		Salmonella_phage(100.0%)	1	NA	NA
WP_000999131.1|2438627_2439836_+	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	26.3	3.9e-33
>prophage 181
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2451957	2452857	2803947		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_000524836.1|2451957_2452857_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	29.2	4.2e-16
>prophage 182
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2460229	2460649	2803947		Bacillus_phage(100.0%)	1	NA	NA
WP_000920239.1|2460229_2460649_-	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	NA	Q2LI91	Bacillus_phage	61.9	2.6e-37
>prophage 183
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2466282	2467164	2803947		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_000730042.1|2466282_2467164_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	46.3	2.9e-62
>prophage 184
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2475042	2475678	2803947		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000285450.1|2475042_2475678_+	HAD family hydrolase	NA	A7J6N1	Paramecium_bursaria_Chlorella_virus	27.1	1.6e-09
>prophage 185
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2489242	2493223	2803947		Staphylococcus_phage(50.0%)	4	NA	NA
WP_011447058.1|2489242_2489881_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6JQU5	Staphylococcus_phage	48.1	2.6e-36
WP_000684141.1|2490191_2491316_+	NAD(P)-binding protein	NA	A0A2K9L3K5	Tupanvirus	22.8	5.5e-13
WP_000417016.1|2491407_2492361_-	2-hydroxyacid dehydrogenase	NA	A0A1V0SBV6	Catovirus	28.9	2.9e-31
WP_000737705.1|2492722_2493223_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	39.3	2.0e-07
>prophage 186
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2497139	2497943	2803947		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000717381.1|2497139_2497943_-	CHAP domain-containing protein	NA	A0A2R3ZXQ4	Staphylococcus_phage	41.3	9.3e-07
>prophage 187
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2516920	2517526	2803947		Pithovirus(100.0%)	1	NA	NA
WP_000913019.1|2516920_2517526_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	30.6	3.8e-13
>prophage 188
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2529610	2532778	2803947		Leptospira_phage(100.0%)	1	NA	NA
WP_000592303.1|2529610_2532778_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.8	6.2e-62
>prophage 189
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2556241	2557908	2803947		Anomala_cuprea_entomopoxvirus(50.0%)	2	NA	NA
WP_000389662.1|2556241_2557051_+	energy-coupling factor transporter ATPase	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.0	2.2e-19
WP_000155386.1|2557047_2557908_+	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	23.9	9.7e-10
>prophage 190
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2563337	2572567	2803947	protease	Vibrio_phage(33.33%)	9	NA	NA
WP_000402465.1|2563337_2564474_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A2I7SAX5	Vibrio_phage	27.0	5.4e-08
WP_001549616.1|2564602_2566009_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000655244.1|2566562_2566745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001797632.1|2566726_2566966_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000130149.1|2567198_2568863_+	acetolactate synthase AlsS	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	25.9	8.0e-45
WP_000186134.1|2568899_2569604_+	acetolactate decarboxylase	NA	NA	NA	NA	NA
WP_001549607.1|2569967_2570393_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000044365.1|2570686_2571502_+	HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_160177750.1|2571712_2572567_+	M23 family metallopeptidase	NA	E5G070	Clostridium_phage	39.7	2.2e-06
>prophage 191
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2575943	2579038	2803947		Staphylococcus_phage(50.0%)	5	NA	NA
WP_001015500.1|2575943_2576792_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	39.2	2.0e-44
WP_001549596.1|2577011_2577137_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000333465.1|2577398_2578007_+	DUF3885 domain-containing protein	NA	NA	NA	NA	NA
WP_001791678.1|2578099_2578261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001549592.1|2578297_2579038_-	NAD-dependent protein deacylase	NA	A0A2I2L319	Orpheovirus	29.4	7.3e-14
>prophage 192
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2585359	2586772	2803947		Pandoravirus(100.0%)	1	NA	NA
WP_000169220.1|2585359_2586772_+	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	28.9	5.0e-48
>prophage 193
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2590732	2592295	2803947		Vibrio_phage(100.0%)	1	NA	NA
WP_000792345.1|2590732_2592295_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	25.0	5.4e-19
>prophage 194
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2604458	2605427	2803947		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_000989091.1|2604458_2605427_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.8	1.3e-15
>prophage 195
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2622956	2623865	2803947		Klosneuvirus(100.0%)	1	NA	NA
WP_000167867.1|2622956_2623865_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	32.0	3.2e-27
>prophage 196
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2641144	2643964	2803947		Paramecium_bursaria_Chlorella_virus(50.0%)	2	NA	NA
WP_000334465.1|2641144_2642950_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	38.6	2.0e-97
WP_000908176.1|2643181_2643964_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.5	9.7e-09
>prophage 197
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2656627	2660459	2803947		Clostridium_phage(50.0%)	4	NA	NA
WP_000070866.1|2656627_2657071_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	53.7	5.6e-38
WP_000160304.1|2657191_2657902_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_001083311.1|2658216_2658879_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_001242318.1|2659157_2660459_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	58.9	2.7e-133
>prophage 198
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2668397	2670008	2803947		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_000159960.1|2668397_2670008_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.6	2.7e-146
>prophage 199
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2677811	2685561	2803947		Bacillus_virus(25.0%)	9	NA	NA
WP_000273357.1|2677811_2678411_+	thymidine kinase	NA	G3MBK1	Bacillus_virus	42.9	6.2e-32
WP_160177753.1|2678411_2679488_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_000248735.1|2679474_2680311_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_011447046.1|2680343_2681441_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	35.6	7.9e-41
WP_000697334.1|2681437_2681857_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA	NA
WP_000654185.1|2681963_2682488_+	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_000120494.1|2682514_2683753_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	8.2e-103
WP_000048712.1|2683780_2684410_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_000723418.1|2684433_2685561_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	29.9	1.0e-27
>prophage 200
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2695964	2696360	2803947		Staphylococcus_phage(100.0%)	1	NA	NA
WP_000932694.1|2695964_2696360_+	single-stranded DNA-binding protein	NA	A0A1J0MFK5	Staphylococcus_phage	38.5	1.3e-14
>prophage 201
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2702530	2703178	2803947		Moumouvirus(100.0%)	1	NA	NA
WP_001187629.1|2702530_2703178_-	HD domain-containing protein	NA	H2ED17	Moumouvirus	27.0	6.1e-09
>prophage 202
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2710378	2711899	2803947		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_001178942.1|2710378_2711899_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.9	2.0e-58
>prophage 203
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2717586	2719614	2803947		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_000546584.1|2717586_2719614_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	23.1	5.6e-24
>prophage 204
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2724763	2728148	2803947		Clostridium_botulinum_C_phage(50.0%)	5	NA	NA
WP_000621175.1|2724763_2725126_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	32.8	4.2e-07
WP_000390829.1|2725475_2726477_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_001052491.1|2726595_2726922_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_001190829.1|2726923_2727403_+	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_001041103.1|2727377_2728148_+	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	34.9	1.3e-21
>prophage 205
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2741587	2746311	2803947		Micromonas_sp._RCC1109_virus(50.0%)	4	NA	NA
WP_000094576.1|2741587_2743117_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	28.1	5.5e-08
WP_000214557.1|2743146_2744151_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_050961509.1|2744287_2744542_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_000047820.1|2744541_2746311_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.1	5.3e-63
>prophage 206
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2750071	2763916	2803947	tRNA	Moraxella_phage(16.67%)	13	NA	NA
WP_000159034.1|2750071_2751097_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	40.9	6.9e-63
WP_000106330.1|2751198_2752809_-	MutS family DNA mismatch repair protein	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	26.9	3.3e-19
WP_001790685.1|2752897_2753026_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000602071.1|2753170_2755099_-	ABC-F type ribosomal protection protein	NA	A0A2K9L0W2	Tupanvirus	30.4	5.4e-53
WP_001283612.1|2755351_2755987_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA	NA
WP_072353927.1|2756341_2757370_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
WP_000581077.1|2757429_2757654_+	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
WP_001052270.1|2757860_2759111_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	31.2	4.5e-40
WP_000790330.1|2759293_2760244_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_000141414.1|2760392_2761877_+	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	25.6	4.0e-19
WP_001253312.1|2761873_2762833_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_001790167.1|2763020_2763128_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000688492.1|2763199_2763916_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	32.6	2.3e-25
>prophage 207
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2771089	2774567	2803947	terminase	uncultured_virus(50.0%)	4	NA	NA
WP_000917289.1|2771089_2771374_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000240645.1|2771449_2773066_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000128898.1|2773767_2773980_+	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	74.3	1.1e-23
WP_001293058.1|2773976_2774567_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	95.8	1.1e-97
>prophage 208
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2803947	2782037	2803477	2803947	integrase	Staphylococcus_phage(100.0%)	36	2784880:2784894	2794439:2794453
WP_000791407.1|2782037_2783093_+	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000595324.1|2783114_2784131_+	bi-component leukocidin LukGH subunit G	NA	A0A2I6PER8	Staphylococcus_phage	29.0	1.1e-25
2784880:2784894	attL	CTATCATTATCGAAT	NA	NA	NA	NA
WP_000857198.1|2785249_2786287_-|integrase	site-specific integrase	integrase	A0A1X9H022	Staphylococcus_phage	100.0	2.6e-179
WP_001549185.1|2786477_2787191_-	toxin MazF	NA	A0A1X9H026	Staphylococcus_phage	100.0	5.0e-129
WP_000705240.1|2787268_2787451_-	hypothetical protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
WP_000100503.1|2787650_2787836_-	hypothetical protein	NA	A0A1X9H0K5	Staphylococcus_phage	100.0	1.1e-24
WP_001557601.1|2788052_2788907_-	restriction endonuclease	NA	A0A1X9H037	Staphylococcus_phage	100.0	7.3e-151
WP_001083975.1|2788918_2789635_-	helix-turn-helix domain-containing protein	NA	A0A1X9H038	Staphylococcus_phage	100.0	5.4e-131
WP_000639926.1|2789798_2790041_+	DUF739 family protein	NA	A0A075LZJ3	Staphylococcus_phage	100.0	2.8e-39
WP_000435341.1|2790053_2790314_+	transcriptional regulator	NA	A7TW91	Staphylococcus_phage	100.0	2.7e-40
WP_001148342.1|2790932_2791688_+	oxidoreductase	NA	A0A0H4J326	Staphylococcus_phage	99.6	7.4e-139
WP_001148862.1|2791703_2791901_+	hypothetical protein	NA	O80075	Staphylococcus_phage	87.7	3.5e-24
WP_000762521.1|2791887_2792268_-	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
WP_001120197.1|2792322_2792643_+	DUF771 domain-containing protein	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
WP_000066020.1|2792639_2792801_+	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
WP_000165371.1|2792895_2793198_+	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_031824013.1|2793202_2793463_+	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	98.8	1.2e-43
WP_001205732.1|2793471_2793735_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_160177754.1|2793743_2795687_+	AAA family ATPase	NA	A0A2I6PDH3	Staphylococcus_phage	99.1	0.0e+00
2794439:2794453	attR	ATTCGATAATGATAG	NA	NA	NA	NA
WP_000138481.1|2795688_2796609_+	recombinase	NA	A0A1V0E5D7	Staphylococcus_phage	100.0	1.0e-166
WP_071621397.1|2796689_2797307_+	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	100.0	9.1e-87
WP_024937184.1|2797307_2797778_+	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	95.5	1.3e-77
WP_000148301.1|2797807_2798692_+	DnaD domain protein	NA	S4V6D4	Staphylococcus_phage	95.9	3.1e-136
WP_000338528.1|2798698_2798917_+	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_000401964.1|2798925_2799330_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A0E3XBN4	Staphylococcus_phage	100.0	1.4e-72
WP_000101274.1|2799342_2799711_+	hypothetical protein	NA	W5RAK8	Staphylococcus_phage	100.0	8.2e-51
WP_000131366.1|2799714_2799957_+	hypothetical protein	NA	A0EWX8	Staphylococcus_phage	100.0	3.9e-41
WP_000982711.1|2800021_2800471_+	hypothetical protein	NA	A0A2I6PDH2	Staphylococcus_phage	99.3	2.1e-80
WP_001105598.1|2800467_2800977_+	hypothetical protein	NA	A0A1X9H0D4	Staphylococcus_phage	100.0	3.2e-93
WP_000197967.1|2800973_2801384_+	hypothetical protein	NA	C8CH13	Staphylococcus_phage	100.0	2.3e-70
WP_001066444.1|2801376_2801913_+	hypothetical protein	NA	A0A1X9H0S5	Staphylococcus_phage	100.0	1.4e-96
WP_000195820.1|2801949_2802156_+	DUF1381 domain-containing protein	NA	A0A1X9H0C2	Staphylococcus_phage	100.0	1.3e-21
WP_000595265.1|2802152_2802302_+	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000265041.1|2802301_2802502_+	DUF1514 domain-containing protein	NA	R9QT57	Staphylococcus_phage	100.0	1.1e-28
WP_000590126.1|2802529_2802946_+	hypothetical protein	NA	A0A1X9H0U8	Staphylococcus_phage	100.0	2.9e-76
WP_000988336.1|2803177_2803477_+	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
