bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	1.1|904097|26|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	96.154	26	1	0	1	26	1294764	1294789	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	1.32e-05	39.6	1.0	CCGCCAGCTTCTATGTTGGGGCCCCG	1294764-1294789	CCGCCTGCTTCTATGTTGGGGCCCCG	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	1.1|904097|26|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	92.308	26	2	0	1	26	1294708	1294733	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	1.19e-04	36.5	1.0	CCGCCAGCTTCTATGTTGGGGCCCCG	1294708-1294733	CCGCCTGCTTTTATGTTGGGGCCCCG	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	1.1|904097|26|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	92.308	26	2	0	1	26	1294820	1294845	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	1.19e-04	36.5	1.0	CCGCCAGCTTCTATGTTGGGGCCCCG	1294820-1294845	CCGCCTGCTTCTGTGTTGGGGCCCCG	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2.1|1214549|34|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	34	0	0	1	34	593389	593422	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	4.48e-10	55.5	1.0	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	593389-593422	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	2.1|1214549|34|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	34	0	0	1	34	682607	682574	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	4.48e-10	55.5	1.0	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	682574-682607	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	4.1|1257659|42|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	42	0	0	1	42	682706	682665	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	1.28e-13	68.2	1.0	GAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTG	682665-682706	CACCCCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTC	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	4.1|1257659|42|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	42	0	0	1	42	593290	593331	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	1.28e-13	68.2	1.0	GAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTG	593290-593331	GAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTG	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	4.1|1257659|42|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	42	0	0	1	42	978493	978534	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	1.28e-13	68.2	1.0	GAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTG	978493-978534	GAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTG	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	4.1|1257659|42|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	97.619	42	1	0	1	42	2332630	2332589	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	1.15e-12	65.0	1.0	GAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTG	2332589-2332630	CACCCCAACTTGCATTGCCTGTAGAATTTCTTTTCGAAATTC	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	4.1|1257659|42|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	97.619	42	1	0	1	42	77556	77597	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	1.15e-12	65.0	1.0	GAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTG	77556-77597	GAATTTCGAAAAGAAATTCTACAGGCAAAGCGAGTTGGGGTG	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	4.1|1257659|42|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	97.619	42	1	0	1	42	414050	414091	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	1.15e-12	65.0	1.0	GAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTG	414050-414091	GAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTG	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	4.1|1257659|42|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	97.619	42	1	0	1	42	1250450	1250491	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	1.15e-12	65.0	1.0	GAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGGGGTG	1250450-1250491	GAATTTCGAAATGAAATTCTACAGGCAATGCGAGTTGGGGTG	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	4.3|1257773|40|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	40	0	0	1	40	904161	904122	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	9.99e-13	65.0	1.0	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGC	904122-904161	GCCAACTTGCACATTATTGTAAGCTGACTTTTCGTCAGCT	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	4.3|1257773|40|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	95.000	40	2	0	1	40	79013	79052	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	8.10e-11	58.6	1.0	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGC	79013-79052	AGCTGACGAAAAGTCAGCTTACGATAATGTGCAGGTTGGC	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	4.3|1257773|40|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	95.000	40	2	0	1	40	908129	908090	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	8.10e-11	58.6	1.0	AGCTGACGAAAAGTCAGCTTACAATAATGTGCAAGTTGGC	908090-908129	GCCAACTTGCACATTTTTGTAAGCTGACTTTTCGCCAGCT	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	4.4|1257812|26|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	96.154	26	1	0	1	26	1294845	1294820	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	1.32e-05	39.6	1.0	CGGGGCCCCAACACAGAAGCTGGCGG	1294820-1294845	CCGCCTGCTTCTGTGTTGGGGCCCCG	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	4.4|1257812|26|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	92.308	26	2	0	1	26	1122110	1122085	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	1.19e-04	36.5	1.0	CGGGGCCCCAACACAGAAGCTGGCGG	1122085-1122110	CCACCAGCCTCTGTGTTGGGGCCCCG	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	4.4|1257812|26|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	92.308	26	2	0	1	26	1294789	1294764	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	1.19e-04	36.5	1.0	CGGGGCCCCAACACAGAAGCTGGCGG	1294764-1294789	CCGCCTGCTTCTATGTTGGGGCCCCG	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	5.1|1263211|29|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	96.552	29	1	0	1	29	235561	235533	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	4.90e-07	44.4	1.0	TTTCGAAAAGAAATTCTACAAACAATGCA	235533-235561	TGCATTGTCTGTAGAATTTCTTTTCGAAA	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	5.1|1263211|29|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	96.552	29	1	0	1	29	1702894	1702866	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	4.90e-07	44.4	1.0	TTTCGAAAAGAAATTCTACAAACAATGCA	1702866-1702894	TGCATTGCTTGTAGAATTTCTTTTCGAAA	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	5.1|1263211|29|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	96.552	29	1	0	1	29	1702949	1702921	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	4.90e-07	44.4	1.0	TTTCGAAAAGAAATTCTACAAACAATGCA	1702921-1702949	TGCATTGCTTGTAGAATTTCTTTTCGAAA	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	5.1|1263211|29|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.103	29	2	0	1	29	904214	904186	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	4.41e-06	41.2	1.0	TTTCGAAAAGAAATTCTACAAACAATGCA	904186-904214	TGCATTGTCTGTAGAATTTCTTTTTGAAA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	5.1|1263211|29|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.103	29	2	0	1	29	2332627	2332599	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	4.41e-06	41.2	1.0	TTTCGAAAAGAAATTCTACAAACAATGCA	2332599-2332627	TGCATTGCCTGTAGAATTTCTTTTCGAAA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	5.1|1263211|29|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.103	29	2	0	1	29	68151	68179	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	4.41e-06	41.2	1.0	TTTCGAAAAGAAATTCTACAAACAATGCA	68151-68179	TTTCGAAAGGAAATTCTACAGACAATGCA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	5.1|1263211|29|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.103	29	2	0	1	29	414053	414081	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	4.41e-06	41.2	1.0	TTTCGAAAAGAAATTCTACAAACAATGCA	414053-414081	TTTCGAAAAGAAATTCTACAGGCAATGCA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	5.1|1263211|29|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.103	29	2	0	1	29	1102443	1102471	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	4.41e-06	41.2	1.0	TTTCGAAAAGAAATTCTACAAACAATGCA	1102443-1102471	TTTCGAAAAGAAATTCTACAGGCAATGCA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	5.1|1263211|29|NZ_CP047789|CRISPRCasFinder	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.103	29	2	0	1	29	1214512	1214540	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	4.41e-06	41.2	1.0	TTTCGAAAAGAAATTCTACAAACAATGCA	1214512-1214540	TTTCGAAAAGAAATTCTACAGGCAATGCA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.1|2083192|19|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	94.737	19	1	0	1	19	235568	235550	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.029	28.5	1.0	TAAAGAATTTCGAAAAGAA	235550-235568	TTCTTTTCGAAATTCTCTA	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.1|2083192|19|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	94.737	19	1	0	1	19	1702901	1702883	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.029	28.5	1.0	TAAAGAATTTCGAAAAGAA	1702883-1702901	TTCTTTTCGAAATTCTCTA	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.1|2083192|19|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	94.737	19	1	0	1	19	1702956	1702938	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.029	28.5	1.0	TAAAGAATTTCGAAAAGAA	1702938-1702956	TTCTTTTCGAAATTCTCTA	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.1|2083192|19|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	94.737	19	1	0	1	19	414046	414064	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.029	28.5	1.0	TAAAGAATTTCGAAAAGAA	414046-414064	TAGAGAATTTCGAAAAGAA	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.1|2083192|19|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	94.737	19	1	0	1	19	978489	978507	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.029	28.5	1.0	TAAAGAATTTCGAAAAGAA	978489-978507	TAGAGAATTTCGAAAAGAA	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.1|2083192|19|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	89.474	19	2	0	1	19	904221	904203	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.26	25.4	1.0	TAAAGAATTTCGAAAAGAA	904203-904221	TTCTTTTTGAAATTCTCTA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.1|2083192|19|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	89.474	19	2	0	1	19	1516466	1516448	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.26	25.4	1.0	TAAAGAATTTCGAAAAGAA	1516448-1516466	TTCTTTTTGAACTTCTTTA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.1|2083192|19|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	89.474	19	2	0	1	19	1645290	1645272	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.26	25.4	1.0	TAAAGAATTTCGAAAAGAA	1645272-1645290	TTCTTTACTAAATTCTTTA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.1|2083192|19|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	89.474	19	2	0	1	19	2405709	2405691	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.26	25.4	1.0	TAAAGAATTTCGAAAAGAA	2405691-2405709	TTCTTTTCTAATTTCTTTA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.1|2083192|19|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	89.474	19	2	0	1	19	68144	68162	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.26	25.4	1.0	TAAAGAATTTCGAAAAGAA	68144-68162	TAGAGAATTTCGAAAGGAA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.1|2083192|19|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	89.474	19	2	0	1	19	380080	380098	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.26	25.4	1.0	TAAAGAATTTCGAAAAGAA	380080-380098	TAGAGAATTTCGTAAAGAA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.1|2083192|19|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	89.474	19	2	0	1	19	1250446	1250464	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.26	25.4	1.0	TAAAGAATTTCGAAAAGAA	1250446-1250464	TAGAGAATTTCGAAATGAA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	16	0	0	1	16	68103	68118	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.087	26.9	1.0	TCAGCTTACAATAATG	68103-68118	TCAGCTTACAATAATG	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	16	0	0	1	16	78967	78982	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.087	26.9	1.0	TCAGCTTACAATAATG	78967-78982	TCAGCTTACAATAATG	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	16	0	0	1	16	593361	593376	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.087	26.9	1.0	TCAGCTTACAATAATG	593361-593376	TCAGCTTACAATAATG	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	16	0	0	1	16	678223	678238	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.087	26.9	1.0	TCAGCTTACAATAATG	678223-678238	TCAGCTTACAATAATG	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	16	0	0	1	16	682635	682620	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.087	26.9	1.0	TCAGCTTACAATAATG	682620-682635	CATTATTGTAAGCTGA	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	16	0	0	1	16	1004760	1004775	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.087	26.9	1.0	TCAGCTTACAATAATG	1004760-1004775	TCAGCTTACAATAATG	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	16	0	0	1	16	1214252	1214267	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.087	26.9	1.0	TCAGCTTACAATAATG	1214252-1214267	TCAGCTTACAATAATG	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	16	0	0	1	16	1703053	1703038	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.087	26.9	1.0	TCAGCTTACAATAATG	1703038-1703053	CATTATTGTAAGCTGA	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	16	0	0	1	16	2248569	2248584	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.087	26.9	1.0	TCAGCTTACAATAATG	2248569-2248584	TCAGCTTACAATAATG	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.750	16	1	0	1	16	79026	79041	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.78	23.8	1.0	TCAGCTTACAATAATG	79026-79041	TCAGCTTACGATAATG	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.750	16	1	0	1	16	235437	235422	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.78	23.8	1.0	TCAGCTTACAATAATG	235422-235437	CATTATTGAAAGCTGA	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.750	16	1	0	1	16	414005	414020	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.78	23.8	1.0	TCAGCTTACAATAATG	414005-414020	TCAGCTTACTATAATG	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.750	16	1	0	1	16	636574	636589	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.78	23.8	1.0	TCAGCTTACAATAATG	636574-636589	TCAGCTTACAACAATG	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.750	16	1	0	1	16	908116	908101	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.78	23.8	1.0	TCAGCTTACAATAATG	908101-908116	CATTTTTGTAAGCTGA	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.750	16	1	0	1	16	1121966	1121951	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.78	23.8	1.0	TCAGCTTACAATAATG	1121951-1121966	CACTATTGTAAGCTGA	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.750	16	1	0	1	16	1122080	1122065	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.78	23.8	1.0	TCAGCTTACAATAATG	1122065-1122080	CACTATTGTAAGCTGA	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	7.2|2083264|16|NZ_CP047789|PILER-CR	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.750	16	1	0	1	16	2434788	2434803	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	0.78	23.8	1.0	TCAGCTTACAATAATG	2434788-2434803	TCAGCTTACAACAATG	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	8.1|2524049|33|NZ_CP047789|CRT	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.939	33	2	0	1	33	682652	682620	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	9.53e-08	47.5	1.0	CAGAAGCTGACAGAAAGTCAGCTTACAATAATG	682620-682652	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	8.1|2524049|33|NZ_CP047789|CRT	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.939	33	2	0	1	33	904165	904133	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	9.53e-08	47.5	1.0	CAGAAGCTGACAGAAAGTCAGCTTACAATAATG	904133-904165	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	8.1|2524049|33|NZ_CP047789|CRT	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.939	33	2	0	1	33	78950	78982	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	9.53e-08	47.5	1.0	CAGAAGCTGACAGAAAGTCAGCTTACAATAATG	78950-78982	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	8.1|2524049|33|NZ_CP047789|CRT	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.939	33	2	0	1	33	2248552	2248584	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	9.53e-08	47.5	1.0	CAGAAGCTGACAGAAAGTCAGCTTACAATAATG	2248552-2248584	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	8.2|2524105|36|NZ_CP047789|CRT	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	100.000	36	0	0	1	36	904221	904186	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	5.60e-11	58.6	1.0	TAGAGAATTTCAAAAAGAAATTCTACAGACAATGCA	904186-904221	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	0
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	8.2|2524105|36|NZ_CP047789|CRT	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	97.222	36	1	0	1	36	235568	235533	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	5.04e-10	55.5	1.0	TAGAGAATTTCAAAAAGAAATTCTACAGACAATGCA	235533-235568	TGCATTGTCTGTAGAATTTCTTTTCGAAATTCTCTA	1
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	8.2|2524105|36|NZ_CP047789|CRT	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	94.444	36	2	0	1	36	68144	68179	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	4.54e-09	52.3	1.0	TAGAGAATTTCAAAAAGAAATTCTACAGACAATGCA	68144-68179	TAGAGAATTTCGAAAGGAAATTCTACAGACAATGCA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	8.2|2524105|36|NZ_CP047789|CRT	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	94.444	36	2	0	1	36	414046	414081	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	4.54e-09	52.3	1.0	TAGAGAATTTCAAAAAGAAATTCTACAGACAATGCA	414046-414081	TAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCA	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	8.3|2524164|33|NZ_CP047789|CRT	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.939	33	2	0	1	33	682652	682620	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	9.53e-08	47.5	1.0	CAGAAGGTGACGAAAAGTCAGCATACAATAATG	682620-682652	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	8.3|2524164|33|NZ_CP047789|CRT	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.939	33	2	0	1	33	904165	904133	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	9.53e-08	47.5	1.0	CAGAAGGTGACGAAAAGTCAGCATACAATAATG	904133-904165	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	8.3|2524164|33|NZ_CP047789|CRT	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.939	33	2	0	1	33	78950	78982	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	9.53e-08	47.5	1.0	CAGAAGGTGACGAAAAGTCAGCATACAATAATG	78950-78982	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	8.3|2524164|33|NZ_CP047789|CRT	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.939	33	2	0	1	33	593344	593376	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	9.53e-08	47.5	1.0	CAGAAGGTGACGAAAAGTCAGCATACAATAATG	593344-593376	CAGAAGATGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP047789	Staphylococcus aureus strain UP_967 chromosome, complete genome	8.3|2524164|33|NZ_CP047789|CRT	NZ_CP047789.1	Staphylococcus aureus strain UP_967 chromosome, complete genome	93.939	33	2	0	1	33	2248552	2248584	904067-904152|1214525-1214606|1250482-1250574|1257643-1257867|1263185-1263265|1420178-1420270|2083139-2083312|2524026-2524219|2648234-2648384	9.53e-08	47.5	1.0	CAGAAGGTGACGAAAAGTCAGCATACAATAATG	2248552-2248584	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
