bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.1|786563|32|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	96.875	32	1	0	1	32	462441	462410	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	2.68e-08	49.1	1.0	GAATTTCGAATAGAAATTCTACAGGCAATGCA	462410-462441	TGCATTGCCTGTAGAATTTCTTTTCGAAATTC	1
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.1|786563|32|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	96.875	32	1	0	1	32	475674	475643	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	2.68e-08	49.1	1.0	GAATTTCGAATAGAAATTCTACAGGCAATGCA	475643-475674	TGCATTGCCTGTAGAATTTCTTTTCGAAATTC	1
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.1|786563|32|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	96.875	32	1	0	1	32	475732	475701	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	2.68e-08	49.1	1.0	GAATTTCGAATAGAAATTCTACAGGCAATGCA	475701-475732	TGCATTGCCTGTAGAATTTCTTTTCGAAATTC	1
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.1|786563|32|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	96.875	32	1	0	1	32	686883	686852	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	2.68e-08	49.1	1.0	GAATTTCGAATAGAAATTCTACAGGCAATGCA	686852-686883	TGCATTGCCTGTAGAATTTCTTTTCGAAATTC	1
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.1|786563|32|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	96.875	32	1	0	1	32	998893	998924	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	2.68e-08	49.1	1.0	GAATTTCGAATAGAAATTCTACAGGCAATGCA	998893-998924	GAATTTCGAAAAGAAATTCTACAGGCAATGCA	1
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.1|786563|32|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	93.750	32	2	0	1	32	41168	41199	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	2.41e-07	46.0	1.0	GAATTTCGAATAGAAATTCTACAGGCAATGCA	41168-41199	GAATTTCAAAAAGAAATTCTACAGGCAATGCA	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.1|786563|32|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	93.750	32	2	0	1	32	470354	470323	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	2.41e-07	46.0	1.0	GAATTTCGAATAGAAATTCTACAGGCAATGCA	470323-470354	TGCATTGTCTGTAGAATTTCTTTTCGAAATTC	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.1|786563|32|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	93.750	32	2	0	1	32	589357	589326	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	2.41e-07	46.0	1.0	GAATTTCGAATAGAAATTCTACAGGCAATGCA	589326-589357	TGCATTGCTTGTAGAATTTCTTTTCGAAATTC	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.1|786563|32|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	93.750	32	2	0	1	32	1382426	1382457	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	2.41e-07	46.0	1.0	GAATTTCGAATAGAAATTCTACAGGCAATGCA	1382426-1382457	GAATTTCGAAAAGAAATTCTACAGACAATGCA	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.3|786576|28|NZ_CP047792|PILER-CR	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	96.429	28	1	0	1	28	462437	462410	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.45e-06	42.8	1.0	TTCGAATAGAAATTCTACAGGCAATGCA	462410-462437	TGCATTGCCTGTAGAATTTCTTTTCGAA	1
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.3|786576|28|NZ_CP047792|PILER-CR	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	96.429	28	1	0	1	28	475670	475643	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.45e-06	42.8	1.0	TTCGAATAGAAATTCTACAGGCAATGCA	475643-475670	TGCATTGCCTGTAGAATTTCTTTTCGAA	1
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.3|786576|28|NZ_CP047792|PILER-CR	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	96.429	28	1	0	1	28	475728	475701	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.45e-06	42.8	1.0	TTCGAATAGAAATTCTACAGGCAATGCA	475701-475728	TGCATTGCCTGTAGAATTTCTTTTCGAA	1
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.3|786576|28|NZ_CP047792|PILER-CR	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	96.429	28	1	0	1	28	686879	686852	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.45e-06	42.8	1.0	TTCGAATAGAAATTCTACAGGCAATGCA	686852-686879	TGCATTGCCTGTAGAATTTCTTTTCGAA	1
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.3|786576|28|NZ_CP047792|PILER-CR	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	96.429	28	1	0	1	28	998897	998924	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.45e-06	42.8	1.0	TTCGAATAGAAATTCTACAGGCAATGCA	998897-998924	TTCGAAAAGAAATTCTACAGGCAATGCA	1
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.3|786576|28|NZ_CP047792|PILER-CR	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	92.857	28	2	0	1	28	41172	41199	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.30e-05	39.6	1.0	TTCGAATAGAAATTCTACAGGCAATGCA	41172-41199	TTCAAAAAGAAATTCTACAGGCAATGCA	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.3|786576|28|NZ_CP047792|PILER-CR	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	92.857	28	2	0	1	28	470350	470323	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.30e-05	39.6	1.0	TTCGAATAGAAATTCTACAGGCAATGCA	470323-470350	TGCATTGTCTGTAGAATTTCTTTTCGAA	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.3|786576|28|NZ_CP047792|PILER-CR	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	92.857	28	2	0	1	28	589353	589326	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.30e-05	39.6	1.0	TTCGAATAGAAATTCTACAGGCAATGCA	589326-589353	TGCATTGCTTGTAGAATTTCTTTTCGAA	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	1.3|786576|28|NZ_CP047792|PILER-CR	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	92.857	28	2	0	1	28	1382430	1382457	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.30e-05	39.6	1.0	TTCGAATAGAAATTCTACAGGCAATGCA	1382430-1382457	TTCGAAAAGAAATTCTACAGACAATGCA	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	3.1|1261083|29|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	100.000	29	0	0	1	29	475585	475613	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	5.36e-08	47.5	1.0	CGCATTGCCTGTAGAATTTCTTTTCGAAA	475585-475613	CGCATTGCCTGTAGAATTTCTTTTCGAAA	0
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	3.1|1261083|29|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	100.000	29	0	0	1	29	522966	522938	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	5.36e-08	47.5	1.0	CGCATTGCCTGTAGAATTTCTTTTCGAAA	522938-522966	TTTCGAAAAGAAATTCTACAGGCAATGCG	0
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	3.1|1261083|29|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	100.000	29	0	0	1	29	998866	998838	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	5.36e-08	47.5	1.0	CGCATTGCCTGTAGAATTTCTTTTCGAAA	998838-998866	TTTCGAAAAGAAATTCTACAGGCAATGCG	0
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	4.1|1295102|36|NZ_CP047792|CRT	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	94.444	36	2	0	1	36	1295046	1295081	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	4.97e-09	52.3	1.0	ACTTCCACATTATTGATATCTGACTTTTGGTCAGCT	1295046-1295081	ACTTGCACATTATTGAAATCTGACTTTTGGTCAGCT	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	4.2|1295158|38|NZ_CP047792|CRT	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	94.737	38	2	0	1	38	475579	475616	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	6.07e-10	55.5	1.0	CCAACTCTCATTGCCTGTAGAATTTCTTTACGAAATTC	475579-475616	CCAACTCGCATTGCCTGTAGAATTTCTTTTCGAAATTC	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	4.2|1295158|38|NZ_CP047792|CRT	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	94.737	38	2	0	1	38	998872	998835	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	6.07e-10	55.5	1.0	CCAACTCTCATTGCCTGTAGAATTTCTTTACGAAATTC	998835-998872	GAATTTCGAAAAGAAATTCTACAGGCAATGCGAGTTGG	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	5.1|1382470|30|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	93.333	30	2	0	1	30	1261069	1261040	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.81e-06	42.8	1.0	GCCCCAACATAGAGAAATTGGATCCCCAAT	1261040-1261069	ATTGGGAATCCAATTTCTCTGTGTTGGGGC	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	5.1|1382470|30|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	93.333	30	2	0	1	30	1710979	1710950	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.81e-06	42.8	1.0	GCCCCAACATAGAGAAATTGGATCCCCAAT	1710950-1710979	ATTGGGAATCCAATTTCTCTTTGTTGGGGC	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	5.1|1382470|30|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	93.333	30	2	0	1	30	1792821	1792792	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.81e-06	42.8	1.0	GCCCCAACATAGAGAAATTGGATCCCCAAT	1792792-1792821	ATTGGGAATCCAATTTCTCTTTGTTGGGGC	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	5.1|1382470|30|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	93.333	30	2	0	1	30	2396060	2396031	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.81e-06	42.8	1.0	GCCCCAACATAGAGAAATTGGATCCCCAAT	2396031-2396060	ATTGGGAATCCAATTTCTCTTTGTTGGGGC	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	5.1|1382470|30|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	93.333	30	2	0	1	30	73169	73198	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.81e-06	42.8	1.0	GCCCCAACATAGAGAAATTGGATCCCCAAT	73169-73198	GCCCCAACAAAGAGAAATTGGATTCCCAAT	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	5.1|1382470|30|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	93.333	30	2	0	1	30	523093	523122	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.81e-06	42.8	1.0	GCCCCAACATAGAGAAATTGGATCCCCAAT	523093-523122	GCCCCAACAAAGAGAAATTGGATTCCCAAT	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	5.1|1382470|30|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	93.333	30	2	0	1	30	1737911	1737940	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.81e-06	42.8	1.0	GCCCCAACATAGAGAAATTGGATCCCCAAT	1737911-1737940	GCCCCAACATAGAGAAATTGGAACACCAAT	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	5.1|1382470|30|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	93.333	30	2	0	1	30	2540541	2540570	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.81e-06	42.8	1.0	GCCCCAACATAGAGAAATTGGATCCCCAAT	2540541-2540570	GCCCCAACAAAGAGAAATTGGATTCCCAAT	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	7.1|1961804|31|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	93.548	31	2	0	1	31	41194	41164	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	7.24e-07	44.4	1.0	TGTCTGCAGAATTTCTTTTTGAAATTCTCTA	41164-41194	TAGAGAATTTCAAAAAGAAATTCTACAGGCA	2
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	9.1|2683054|28|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	96.429	28	1	0	1	28	1261031	1261004	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.45e-06	42.8	1.0	ACAATGCAAGTTGGCGGGGCCCCAACAT	1261004-1261031	ATGTTGGGGCCCCGCCAACTTGCTTTGT	1
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	9.1|2683054|28|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	96.429	28	1	0	1	28	1611555	1611528	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.45e-06	42.8	1.0	ACAATGCAAGTTGGCGGGGCCCCAACAT	1611528-1611555	ATGTTGGGGCCCCGCAAACTTGCATTGT	1
NZ_CP047792	Staphylococcus aureus strain UP_794 chromosome, complete genome	9.1|2683054|28|NZ_CP047792|CRISPRCasFinder	NZ_CP047792.1	Staphylococcus aureus strain UP_794 chromosome, complete genome	96.429	28	1	0	1	28	1611725	1611698	786539-786679|858889-858982|1261054-1261140|1295082-1295270|1382442-1382527|1384736-1384819|1961776-1961862|2099488-2099571|2683026-2683109	1.45e-06	42.8	1.0	ACAATGCAAGTTGGCGGGGCCCCAACAT	1611698-1611725	ATGTTGGGGCCCCGCAAACTTGCATTGT	1
