bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	1.1|411004|33|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	96.970	33	1	0	1	33	726844	726812	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	1.09e-08	50.7	1.0	TGGGCCCCAACACAGAGAAATTGGATTCCCAAT	726812-726844	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCA	1
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	1.1|411004|33|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	96.970	33	1	0	1	33	1288868	1288900	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	1.09e-08	50.7	1.0	TGGGCCCCAACACAGAGAAATTGGATTCCCAAT	1288868-1288900	TGGGCCCCAACACAGAGAAATTGGATTTCCAAT	1
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	2.1|1245719|34|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	97.059	34	1	0	1	34	726845	726812	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	4.17e-09	52.3	1.0	ATGGGCCCCAACAAAGAGAAATTGGATTCTCAAT	726812-726845	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	3.1|1294404|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	100.000	31	0	0	1	31	1805942	1805912	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	7.82e-09	50.7	1.0	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	1805912-1805942	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	0
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	3.1|1294404|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	96.774	31	1	0	1	31	376550	376580	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	7.04e-08	47.5	1.0	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	376550-376580	GGCAATGGAAGTTGGCGGGGCCCCAACACAG	1
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	3.1|1294404|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	96.774	31	1	0	1	31	1805997	1805967	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	7.04e-08	47.5	1.0	GGCAATGCAAGTTGGCGGGGCCCCAACACAG	1805967-1805997	CTGTGTTGGGGCCCCGCCAACTTGCATTACC	1
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	5.1|2355673|46|NZ_CP047865|PILER-CR	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	95.652	46	2	0	1	46	2352149	2352194	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	1.59e-13	68.2	1.0	ACAAAGATAAACCTAATTATCAATTTGGTGGACACAACAGTGTTGA	2352149-2352194	ACAAAGATAAACCTAATTATCAATTCGGTGGACACAATAGTGTTGA	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	5.2|2355736|37|NZ_CP047865|PILER-CR	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	94.595	37	2	0	1	37	2352212	2352248	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	1.74e-09	53.9	1.0	TTCCAAAAGTAAGTGGTCAAAATGAAGGTCAACAAAC	2352212-2352248	TTCCAAAAGTAAGCGGCCAAAATGAAGGTCAACAAAC	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	6.1|2431227|33|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	96.970	33	1	0	1	33	1245406	1245438	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	1.09e-08	50.7	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	1245406-1245438	CAGAAGCTGGCGGAAAGTCAGCTTACAATAATG	1
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	6.1|2431227|33|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	96.970	33	1	0	1	33	1281625	1281657	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	1.09e-08	50.7	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	1281625-1281657	CAGAAGCTGGCGGAAAGTCAGCTTACAATAATG	1
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	6.1|2431227|33|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.939	33	2	0	1	33	2823200	2823168	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	9.85e-08	47.5	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	2823168-2823200	CATTATTGTAAGCTGACTTTCCGCCAGCCTCTG	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	6.1|2431227|33|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.939	33	2	0	1	33	1281681	1281713	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	9.85e-08	47.5	1.0	CAGTAGCTGGCGGAAAGTCAGCTTACAATAATG	1281681-1281713	CAGAAGCTGACGGAAAGTCAGCTTACAATAATG	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	7.1|2596075|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	96.774	31	1	0	1	31	1281685	1281715	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	7.04e-08	47.5	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1281685-1281715	AGCTGACGGAAAGTCAGCTTACAATAATGTG	1
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	7.1|2596075|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.548	31	2	0	1	31	396398	396368	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	6.33e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	396368-396398	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	7.1|2596075|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.548	31	2	0	1	31	726886	726856	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	6.33e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	726856-726886	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	7.1|2596075|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.548	31	2	0	1	31	932986	932956	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	6.33e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	932956-932986	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	7.1|2596075|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.548	31	2	0	1	31	1462337	1462307	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	6.33e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1462307-1462337	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	7.1|2596075|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.548	31	2	0	1	31	1729607	1729577	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	6.33e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1729577-1729607	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	7.1|2596075|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.548	31	2	0	1	31	80558	80588	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	6.33e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	80558-80588	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	7.1|2596075|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.548	31	2	0	1	31	638308	638338	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	6.33e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	638308-638338	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	7.1|2596075|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.548	31	2	0	1	31	638424	638454	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	6.33e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	638424-638454	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	7.1|2596075|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.548	31	2	0	1	31	1035413	1035443	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	6.33e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1035413-1035443	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	7.1|2596075|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.548	31	2	0	1	31	1245410	1245440	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	6.33e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1245410-1245440	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	7.1|2596075|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.548	31	2	0	1	31	1281629	1281659	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	6.33e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	1281629-1281659	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	7.1|2596075|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.548	31	2	0	1	31	2027717	2027747	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	6.33e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	2027717-2027747	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	7.1|2596075|31|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	93.548	31	2	0	1	31	2606876	2606906	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	6.33e-07	44.4	1.0	AGCTGACAGAAAGTCAGCTTACAATAATGTG	2606876-2606906	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	10.1|2847210|34|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	100.000	34	0	0	1	34	938587	938554	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	4.63e-10	55.5	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	938554-938587	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	0
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	10.1|2847210|34|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	100.000	34	0	0	1	34	1294426	1294459	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	4.63e-10	55.5	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	1294426-1294459	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	0
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	10.1|2847210|34|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	97.059	34	1	0	1	34	284327	284294	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	4.17e-09	52.3	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	284294-284327	TTGTAGAATTTCTTTTCGAAATTCTTTGTGTTGG	1
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	10.1|2847210|34|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	94.118	34	2	0	1	34	722438	722471	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	3.75e-08	49.1	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	722438-722471	CCAACACAGAGAATTTCGATAAGAAATTCCACAA	2
NZ_CP047865	Staphylococcus aureus strain UP_844 chromosome, complete genome	10.1|2847210|34|NZ_CP047865|CRISPRCasFinder	NZ_CP047865.1	Staphylococcus aureus strain UP_844 chromosome, complete genome	94.118	34	2	0	1	34	2157367	2157400	410978-411062|1245695-1245776|1294380-1294458|1690768-1690870|2355656-2355789|2431204-2431282|2596050-2596130|2705605-2705690|2717930-2718011|2847186-2847267	3.75e-08	49.1	1.0	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	2157367-2157400	CCAACAAAAAGAATTTCGAAAAGAAATTCTACAA	2
