assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_009913855.1_ASM991385v1	NZ_CP028241	Lactobacillus plantarum strain SRCM101518 chromosome, complete genome	1	2018041-2019263	1,1,1	CRT,CRISPRCasFinder,PILER-CR	no	csa3,csn2,cas2,cas1,cas9	csa3,cas3,DEDDh,DinG,csn2,cas2,cas1,cas9,WYL	Type II-C,Type II-B,Type II-A	GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC,GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC,GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC	36,36,36	1	1	2019067-2019095	NZ_CP028241.1_475067-475095	NA:NA:NA	18,17,16	18	TypeII-C,TypeII-B,TypeII-A	csa3,cas3,DEDDh,DinG,csn2,cas2,cas1,cas9,WYL	NA,NA|236aa|down_5|NZ_CP028241.1_2026516_2027224_-	NA|283aa|up_9|NZ_CP028241.1_2007728_2008577_-	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins	NA|398aa|up_8|NZ_CP028241.1_2008820_2010014_-	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters	csa3|122aa|up_7|NZ_CP028241.1_2010077_2010443_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|411aa|up_6|NZ_CP028241.1_2010467_2011700_-	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|152aa|up_5|NZ_CP028241.1_2012279_2012735_+	pfam11457, DUF3021, Protein of unknown function (DUF3021)	NA|141aa|up_4|NZ_CP028241.1_2012822_2013245_-	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18	NA|158aa|up_3|NZ_CP028241.1_2013390_2013864_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|201aa|up_2|NZ_CP028241.1_2013977_2014580_+	pfam03358, FMN_red, NADPH-dependent FMN reductase	NA|65aa|up_1|NZ_CP028241.1_2014645_2014840_+	pfam04024, PspC, PspC domain	NA|913aa|up_0|NZ_CP028241.1_2015238_2017977_+	cd02080, P-type_ATPase_cation, P-type cation-transporting ATPase similar to Exiguobacterium aurantiacum Mna, an Na(+)-ATPase, and Synechocystis sp	csn2|226aa|down_0|NZ_CP028241.1_2019287_2019965_-	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|102aa|down_1|NZ_CP028241.1_2019961_2020267_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|302aa|down_2|NZ_CP028241.1_2020244_2021150_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1359aa|down_3|NZ_CP028241.1_2021344_2025421_-	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	NA|261aa|down_4|NZ_CP028241.1_2025709_2026492_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|236aa|down_5|NZ_CP028241.1_2026516_2027224_-	NA	NA|455aa|down_6|NZ_CP028241.1_2027329_2028694_-	PRK10746, PRK10746, putative transport protein YifK; Provisional	NA|157aa|down_7|NZ_CP028241.1_2028926_2029397_+	cd04677, Nudix_Hydrolase_18, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|531aa|down_8|NZ_CP028241.1_2029512_2031105_-	smart00910, HIRAN, The HIRAN protein (HIP116, Rad5p N-terminal) is found in the N-terminal regions of the SWI2/SNF2 proteins typified by HIP116 and Rad5p	NA|247aa|down_9|NZ_CP028241.1_2031348_2032089_-	COG2071, COG2071, Predicted glutamine amidotransferases [General function prediction only]
GCF_009913855.1_ASM991385v1	NZ_CP028241	Lactobacillus plantarum strain SRCM101518 chromosome, complete genome	2	2666867-2666952	2	CRISPRCasFinder	no		csa3,cas3,DEDDh,DinG,csn2,cas2,cas1,cas9,WYL	Orphan	AATAAGATACTTTAAGTTTCTTA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,DinG,csn2,cas2,cas1,cas9,WYL	NA,NA	NA|127aa|up_9|NZ_CP028241.1_2657501_2657882_-	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB	NA|279aa|up_8|NZ_CP028241.1_2657892_2658729_-	cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs	NA|169aa|up_7|NZ_CP028241.1_2658987_2659494_+	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|249aa|up_6|NZ_CP028241.1_2659510_2660257_+	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]	NA|171aa|up_5|NZ_CP028241.1_2661425_2661938_-	TIGR02366, conserved_hypothetical_protein, probable dihydroxyacetone kinase regulator	NA|332aa|up_4|NZ_CP028241.1_2662181_2663177_-	pfam01032, FecCD, FecCD transport family	NA|333aa|up_3|NZ_CP028241.1_2663173_2664172_-	pfam01032, FecCD, FecCD transport family	NA|265aa|up_2|NZ_CP028241.1_2664168_2664963_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|310aa|up_1|NZ_CP028241.1_2665199_2666129_+	cd01138, FeuA, Periplasmic binding protein FeuA	NA|200aa|up_0|NZ_CP028241.1_2666249_2666849_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|493aa|down_0|NZ_CP028241.1_2666966_2668445_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|318aa|down_1|NZ_CP028241.1_2668561_2669515_+	cd19092, AKR_BsYcsN_EcYdhF-like, Bacillus subtilis YcsN, Escherichia coli YdhF and similar proteins	NA|189aa|down_2|NZ_CP028241.1_2669734_2670301_+	COG3548, COG3548, Predicted integral membrane protein [Function unknown]	NA|346aa|down_3|NZ_CP028241.1_2670449_2671487_-	cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs	NA|189aa|down_4|NZ_CP028241.1_2671613_2672180_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|243aa|down_5|NZ_CP028241.1_2672338_2673067_-	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]	NA|122aa|down_6|NZ_CP028241.1_2673199_2673565_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|95aa|down_7|NZ_CP028241.1_2673848_2674133_-	pfam08922, DUF1905, Domain of unknown function (DUF1905)	NA|861aa|down_8|NZ_CP028241.1_2674418_2677001_+	cd06522, GH25_AtlA-like, AtlA is an autolysin found in Gram-positive lactic acid bacteria that degrades bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues	NA|471aa|down_9|NZ_CP028241.1_2677271_2678684_-	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like
