The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP045468	Staphylococcus aureus strain SAW1 chromosome, complete genome	2784709	736112	743932	2784709		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|736112_737168_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|737167_737854_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|737828_738302_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093553.1|738643_739084_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637683.1|739363_739948_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062976.1|740046_740760_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|740763_741183_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|741184_741853_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604508.1|742203_742797_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	44.0	6.8e-39
WP_001217797.1|742780_743932_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
>prophage 2
NZ_CP045468	Staphylococcus aureus strain SAW1 chromosome, complete genome	2784709	755913	770422	2784709		uncultured_Caudovirales_phage(50.0%)	13	NA	NA
WP_000663039.1|755913_756972_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.4	1.4e-21
WP_000429011.1|758279_759197_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	6.2e-07
WP_031760357.1|759289_759391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|759468_760974_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|761313_761814_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068497.1|761833_762700_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|763500_763899_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|763861_765967_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|766084_767056_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|767555_767711_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|767749_768721_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245572.1|768707_769664_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616873.1|769660_770422_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 3
NZ_CP045468	Staphylococcus aureus strain SAW1 chromosome, complete genome	2784709	863578	872357	2784709	terminase	Staphylococcus_phage(87.5%)	11	NA	NA
WP_001190615.1|863578_863920_+	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	99.1	1.4e-57
WP_000448773.1|864525_864744_+	hypothetical protein	NA	NA	NA	NA	NA
WP_045181470.1|865452_865665_+	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	98.6	1.1e-31
WP_001293067.1|865661_866231_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	97.9	1.0e-100
WP_001035631.1|867415_867973_-	DUF4888 domain-containing protein	NA	A0A1W6JQE5	Staphylococcus_phage	73.8	1.4e-70
WP_001795626.1|868342_868495_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	98.0	7.6e-19
WP_000139423.1|868565_868676_+	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_000382163.1|868662_868863_+	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
WP_000752917.1|869987_870182_+	CsbD family protein	NA	NA	NA	NA	NA
WP_001183851.1|870415_871267_-	DUF368 domain-containing protein	NA	NA	NA	NA	NA
WP_000168845.1|871595_872357_+	Fe-S cluster assembly ATPase SufC	NA	A0A1V0SE00	Indivirus	23.3	4.4e-06
>prophage 4
NZ_CP045468	Staphylococcus aureus strain SAW1 chromosome, complete genome	2784709	962433	1006487	2784709	transposase,holin,bacteriocin,tRNA,protease	Streptococcus_phage(40.0%)	39	NA	NA
WP_000448937.1|962433_963423_-|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000258003.1|963717_964113_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
WP_001217728.1|964483_965203_+	adaptor protein MecA	NA	NA	NA	NA	NA
WP_000959298.1|965323_966310_+	competence protein CoiA	NA	NA	NA	NA	NA
WP_000082725.1|966357_968166_+	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.5	5.5e-47
WP_000896697.1|968625_969432_-	DsbA family protein	NA	NA	NA	NA	NA
WP_000214067.1|969454_969820_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000224622.1|969923_970517_-	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_155560245.1|970702_971050_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001077683.1|971066_971702_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA	NA
WP_001270834.1|971718_972528_+	NAD kinase	NA	NA	NA	NA	NA
WP_000669925.1|972524_973379_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000062407.1|973399_974785_+	magnesium transporter	NA	NA	NA	NA	NA
WP_000395162.1|974794_976639_+	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_000933195.1|976917_977688_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_000933105.1|977884_978970_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_000570701.1|979311_980880_+	alanine:cation symporter family protein	NA	NA	NA	NA	NA
WP_020977136.1|981022_981781_+	esterase family protein	NA	NA	NA	NA	NA
WP_001060547.1|981946_982672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000355328.1|982673_983525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000600387.1|984259_984769_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001824107.1|984881_986090_-	MFS transporter	NA	NA	NA	NA	NA
WP_000258650.1|986049_987225_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA	NA
WP_000340127.1|987657_989142_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA	NA
WP_001798480.1|989122_989383_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001049957.1|989382_990945_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	2.2e-36
WP_000928413.1|991246_992050_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
WP_078064575.1|992265_994590_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.1e-11
WP_000021872.1|994606_995965_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414178.1|996103_997615_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|998103_998673_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876826.1|998882_999101_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668820.1|999181_1000168_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|1000366_1000543_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033867.1|1000557_1001160_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_160210503.1|1001555_1003202_+|transposase	IS1182 family transposase	transposase	A0A146ICT8	Staphylococcus_phage	99.1	6.3e-292
WP_099112139.1|1003485_1003563_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_029656376.1|1004212_1004479_+|bacteriocin	bacteriocin transporter	bacteriocin	NA	NA	NA	NA
WP_000870825.1|1004522_1006487_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
>prophage 5
NZ_CP045468	Staphylococcus aureus strain SAW1 chromosome, complete genome	2784709	1038693	1047166	2784709		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861570.1|1038693_1039176_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	8.0e-22
WP_001010401.1|1039162_1040287_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174047.1|1040290_1040995_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	41.2	1.4e-46
WP_000848350.1|1040994_1041258_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666799.1|1041259_1041931_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_000032747.1|1041923_1044113_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.8e-140
WP_000483727.1|1044091_1045576_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.5	1.6e-44
WP_000030818.1|1045568_1046597_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
WP_000238670.1|1046599_1047166_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	3.6e-29
>prophage 6
NZ_CP045468	Staphylococcus aureus strain SAW1 chromosome, complete genome	2784709	1318393	1325897	2784709	capsid,head	Staphylococcus_phage(87.5%)	14	NA	NA
WP_001659797.1|1318393_1318591_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	48.4	1.7e-10
WP_078065144.1|1319280_1319505_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	71.0	4.3e-18
WP_001002343.1|1319800_1320007_+	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	56.7	1.9e-12
WP_001788716.1|1320702_1320813_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000006110.1|1321241_1321427_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
WP_000477491.1|1321938_1322043_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000956747.1|1322169_1322421_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001813273.1|1322894_1323149_+	hypothetical protein	NA	A0A1J0MF61	Staphylococcus_phage	62.7	1.4e-25
WP_000780597.1|1323148_1323343_+	hypothetical protein	NA	A0A1J0MG79	Staphylococcus_phage	71.4	2.8e-18
WP_031786973.1|1323403_1323532_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000440735.1|1323498_1323777_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078097461.1|1324294_1324945_+|capsid	phage capsid protein	capsid	A0A1J0MF61	Staphylococcus_phage	54.2	1.7e-59
WP_001217295.1|1324955_1325150_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064137920.1|1325228_1325897_+|head	phage head morphogenesis protein	head	Q4ZE35	Staphylococcus_virus	70.7	1.5e-29
>prophage 7
NZ_CP045468	Staphylococcus aureus strain SAW1 chromosome, complete genome	2784709	1595837	1604149	2784709	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1595837_1596623_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924210.1|1596748_1597639_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	3.4e-26
WP_001062177.1|1597648_1598995_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000683914.1|1599108_1600209_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	30.6	1.0e-08
WP_000624567.1|1600211_1600889_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1601019_1602126_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217251.1|1602349_1604149_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.5e-54
>prophage 8
NZ_CP045468	Staphylococcus aureus strain SAW1 chromosome, complete genome	2784709	1674793	1683836	2784709	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364543.1|1674793_1675312_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.8	2.1e-28
WP_000594983.1|1675333_1677607_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.5	2.1e-64
WP_000749798.1|1677809_1680089_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1680363_1680624_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1680642_1681782_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019166.1|1681804_1682830_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005767.1|1682831_1683836_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 9
NZ_CP045468	Staphylococcus aureus strain SAW1 chromosome, complete genome	2784709	1809811	1906862	2784709	capsid,holin,integrase,tail,head,tRNA,terminase,protease,portal	Staphylococcus_phage(97.03%)	114	1887664:1887679	1911777:1911792
WP_001050576.1|1809811_1816369_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	93.2	1.2e-290
WP_000836467.1|1816694_1817006_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	98.1	5.3e-51
WP_155560217.1|1817027_1819442_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.3	0.0e+00
WP_001025062.1|1819733_1820915_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.5	1.2e-217
WP_000526539.1|1821024_1821978_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764429.1|1821974_1822538_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	98.9	9.2e-102
WP_000757543.1|1822657_1823059_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266100.1|1823630_1824458_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014937042.1|1824460_1824580_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196343.1|1824691_1825693_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	98.8	1.7e-183
WP_001008551.1|1825814_1826279_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001159028.1|1826291_1827473_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	99.2	1.6e-225
WP_000493883.1|1827483_1828116_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	2.4e-111
WP_000384177.1|1828122_1829154_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.5	9.0e-196
WP_117207860.1|1829646_1831149_-	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.1e-29
WP_160210523.1|1831671_1831986_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	85.6	3.0e-46
WP_160210525.1|1831985_1833278_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	91.9	6.6e-212
WP_160210527.1|1833295_1833688_+	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	86.9	6.5e-62
WP_001032836.1|1834092_1834947_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.1	4.9e-38
WP_000384171.1|1835222_1835447_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671047.1|1835645_1836116_+	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	97.4	4.4e-81
WP_001153740.1|1836228_1836672_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030470.1|1836658_1837102_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_155560215.1|1837399_1838035_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_000492902.1|1838201_1838822_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001096492.1|1839290_1840004_-	transaldolase	NA	M1PR54	Cyanophage	34.5	1.2e-18
WP_000091445.1|1840261_1840564_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200550.1|1840819_1841185_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	98.3	6.2e-59
WP_000623471.1|1841181_1841535_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
WP_000453310.1|1841784_1842618_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	1.3e-157
WP_000366163.1|1842829_1843738_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_160210529.1|1843862_1845056_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	96.7	4.3e-218
WP_000109912.1|1845427_1847020_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_078065176.1|1847313_1848060_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.0	7.8e-141
WP_000672009.1|1848064_1848538_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.1	3.6e-83
WP_000718107.1|1848603_1848861_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778518.1|1848857_1849859_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.9	4.8e-186
WP_000348384.1|1849863_1851342_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	96.7	3.4e-281
WP_078065177.1|1851501_1851957_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	97.9	4.0e-79
WP_001838615.1|1852259_1852910_+	hypothetical protein	NA	A0A2H4PQM8	Staphylococcus_phage	68.5	4.7e-33
WP_000070638.1|1852990_1853986_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	92.7	1.7e-66
WP_155560214.1|1854061_1854688_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	82.7	1.2e-78
WP_000627534.1|1854728_1855070_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	93.8	2.8e-53
WP_155560213.1|1855170_1855743_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.8	3.2e-25
WP_000657815.1|1856052_1856706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000370570.1|1856715_1858728_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_155560212.1|1860152_1861238_+	sugar isomerase	NA	NA	NA	NA	NA
WP_001044434.1|1861297_1862152_-	M23 family metallopeptidase	NA	E5G070	Clostridium_phage	37.9	6.4e-06
WP_049280116.1|1862402_1862948_-	hypothetical protein	NA	A0A2H4PQP5	Staphylococcus_phage	32.5	1.8e-09
WP_000669789.1|1863364_1863544_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|1863854_1864115_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702263.1|1864167_1864518_-	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_020444758.1|1865747_1866206_-	amidase	NA	R9QTN8	Staphylococcus_phage	98.7	4.9e-85
WP_000919350.1|1866732_1867224_-	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
WP_000861038.1|1867414_1868170_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|1868181_1868436_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_001791821.1|1868487_1868595_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011447039.1|1868647_1868824_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_000750406.1|1868932_1869706_-	staphylococcal enterotoxin type A	NA	A0EX09	Staphylococcus_phage	100.0	2.2e-146
WP_000340977.1|1870126_1870501_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_160210530.1|1870556_1870844_-	hypothetical protein	NA	G4KNR2	Staphylococcus_phage	98.9	2.9e-43
WP_001153681.1|1870890_1871043_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_160210532.1|1871032_1874818_-	hypothetical protein	NA	A0EX05	Staphylococcus_phage	99.9	0.0e+00
WP_155560211.1|1874833_1876318_-|tail	phage tail protein	tail	A0EX04	Staphylococcus_phage	99.8	6.4e-296
WP_057504498.1|1876314_1880844_-|tail	phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	99.9	0.0e+00
WP_001096355.1|1881088_1881439_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_071621395.1|1881488_1881713_-	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_000268735.1|1881754_1882399_-|tail	phage tail protein	tail	A0EWZ9	Staphylococcus_phage	100.0	3.8e-120
WP_000565498.1|1882399_1882807_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114226.1|1882803_1883208_-	hypothetical protein	NA	G4KNQ5	Staphylococcus_phage	100.0	4.3e-69
WP_000755150.1|1883204_1883567_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000150936.1|1883550_1883835_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238236.1|1883824_1884109_-	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	100.0	1.8e-45
WP_000154559.1|1884128_1885274_-|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_000642728.1|1885297_1886035_-|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000025274.1|1886018_1887206_-|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000625088.1|1887221_1888883_-|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
1887664:1887679	attL	AATAATCCCATTTTTT	NA	NA	NA	NA
WP_000402904.1|1888879_1889224_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988336.1|1889353_1889653_-	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
WP_000590122.1|1889884_1890301_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000265043.1|1890328_1890529_-	DUF1514 domain-containing protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
WP_000595265.1|1890528_1890678_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000592207.1|1890674_1891061_-	hypothetical protein	NA	W5R986	Staphylococcus_phage	100.0	3.0e-64
WP_000195803.1|1891057_1891264_-	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_000185660.1|1891300_1891843_-	dUTP pyrophosphatase	NA	A0A068A209	Staphylococcus_phage	100.0	1.1e-96
WP_000028422.1|1891835_1892018_-	hypothetical protein	NA	A0EWY1	Staphylococcus_phage	100.0	2.6e-26
WP_001065091.1|1892007_1892259_-	DUF1024 family protein	NA	A0EWY0	Staphylococcus_phage	100.0	1.9e-38
WP_000131366.1|1892430_1892673_-	hypothetical protein	NA	A0EWX8	Staphylococcus_phage	100.0	3.9e-41
WP_000101274.1|1892676_1893045_-	hypothetical protein	NA	W5RAK8	Staphylococcus_phage	100.0	8.2e-51
WP_000338531.1|1893375_1893594_-	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	98.6	1.2e-36
WP_000148316.1|1893600_1894485_-	DnaD domain protein	NA	A0EWX4	Staphylococcus_phage	100.0	5.4e-141
WP_000934764.1|1894514_1894985_-	single-stranded DNA-binding protein	NA	A0EWX3	Staphylococcus_phage	100.0	7.4e-81
WP_071621397.1|1894985_1895603_-	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	100.0	9.1e-87
WP_000138472.1|1895683_1896604_-	recombinase	NA	S4SUN6	Staphylococcus_phage	100.0	2.3e-166
WP_000700577.1|1896605_1898549_-	AAA family ATPase	NA	A0EWX0	Staphylococcus_phage	100.0	0.0e+00
WP_107291560.1|1898557_1898821_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	98.9	2.9e-42
WP_000291503.1|1898829_1899090_-	DUF1108 family protein	NA	A0EWW8	Staphylococcus_phage	100.0	8.9e-44
WP_000165375.1|1899070_1899397_-	DUF2482 family protein	NA	W5RAK4	Staphylococcus_phage	100.0	1.2e-53
WP_000066017.1|1899491_1899653_-	DUF1270 domain-containing protein	NA	D2JGJ6	Staphylococcus_phage	100.0	4.3e-20
WP_001120197.1|1899649_1899970_-	DUF771 domain-containing protein	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
WP_000275058.1|1900028_1900661_+	hypothetical protein	NA	A7TW95	Staphylococcus_phage	100.0	1.5e-113
WP_000939496.1|1900675_1900816_-	hypothetical protein	NA	A0A2I6PDG0	Staphylococcus_phage	100.0	1.9e-16
WP_001148855.1|1900846_1901044_-	hypothetical protein	NA	Q8SDM8	Staphylococcus_phage	100.0	7.0e-33
WP_001148605.1|1901059_1901812_-	oxidoreductase	NA	M9NTH5	Staphylococcus_phage	100.0	1.1e-139
WP_000128907.1|1901862_1902192_+	hypothetical protein	NA	M9NS98	Staphylococcus_phage	100.0	2.7e-53
WP_001025874.1|1902180_1902396_-	DUF2829 domain-containing protein	NA	A0EWV9	Staphylococcus_phage	100.0	6.3e-35
WP_000854072.1|1902411_1902675_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	100.0	7.2e-41
WP_001801500.1|1902671_1902845_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001031454.1|1902807_1903521_+	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
WP_000759682.1|1903536_1904469_+	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	100.0	5.7e-173
WP_000591749.1|1904474_1904816_+	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	100.0	4.6e-56
WP_000705248.1|1905019_1905202_+	hypothetical protein	NA	M9NSW6	Staphylococcus_phage	100.0	4.1e-27
WP_000825947.1|1905301_1905766_+	hypothetical protein	NA	A0EWV3	Staphylococcus_phage	100.0	1.1e-28
WP_000857191.1|1905824_1906862_+|integrase	site-specific integrase	integrase	A0EWV2	Staphylococcus_phage	100.0	9.1e-180
1911777:1911792	attR	AATAATCCCATTTTTT	NA	NA	NA	NA
>prophage 1
NZ_CP045469	Staphylococcus aureus strain SAW1 plasmid pSAW1-2, complete sequence	15916	0	11092	15916	integrase,terminase,coat	Staphylococcus_phage(86.67%)	17	4707:4721	12013:12027
WP_001190615.1|0_342_+	hypothetical protein	NA	Q4ZE66	Staphylococcus_phage	99.1	1.4e-57
WP_000846285.1|353_932_+	hypothetical protein	NA	A0A2H4JBG0	uncultured_Caudovirales_phage	38.4	1.4e-28
WP_000448773.1|949_1168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000771368.1|1218_1746_+|coat	spore coat protein	coat	A0A1W6JQH7	Staphylococcus_phage	97.1	3.5e-87
WP_045181470.1|1877_2090_+	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	98.6	1.1e-31
WP_001293067.1|2086_2656_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	97.9	1.0e-100
WP_001035631.1|3840_4398_-	DUF4888 domain-containing protein	NA	A0A1W6JQE5	Staphylococcus_phage	73.8	1.4e-70
4707:4721	attL	CACTCGCTTAATAAA	NA	NA	NA	NA
WP_001795626.1|4771_4924_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	98.0	7.6e-19
WP_000139423.1|4994_5105_+	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_000382163.1|5091_5292_+	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
WP_000266157.1|5909_7130_-|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	47.5	6.4e-100
WP_000733774.1|7218_7947_-	staphylococcal enterotoxin type K	NA	A0EX09	Staphylococcus_phage	31.8	5.5e-22
WP_001260004.1|9678_10011_-	helix-turn-helix transcriptional regulator	NA	A0A1J0MFC1	Staphylococcus_phage	74.5	1.6e-37
WP_000243851.1|10203_10467_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J9X2	uncultured_Caudovirales_phage	94.8	3.1e-36
WP_000091731.1|10459_10732_+	winged helix-turn-helix domain-containing protein	NA	Q4ZE77	Staphylococcus_phage	90.0	9.7e-41
WP_000784875.1|10743_10890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001058486.1|10882_11092_+	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	94.2	1.7e-29
12013:12027	attR	TTTATTAAGCGAGTG	NA	NA	NA	NA
>prophage 1
NZ_CP045470	Staphylococcus aureus strain SAW1 plasmid pSAW1-3, complete sequence	15908	129	12721	15908	integrase,terminase	Staphylococcus_phage(85.71%)	15	2954:2968	10255:10269
WP_045181470.1|129_342_+	hypothetical protein	NA	Q4ZE86	Staphylococcus_phage	98.6	1.1e-31
WP_001293067.1|338_908_+|terminase	terminase small subunit	terminase	Q4ZE85	Staphylococcus_phage	97.9	1.0e-100
WP_000278085.1|1215_2016_+	staphylococcal enterotoxin type B	NA	A0A097PAT7	Streptococcus_pyogenes_phage	49.4	1.0e-53
WP_001035631.1|2090_2648_-	DUF4888 domain-containing protein	NA	A0A1W6JQE5	Staphylococcus_phage	73.8	1.4e-70
2954:2968	attL	CACTCGCTTAATAAA	NA	NA	NA	NA
WP_001795626.1|3018_3171_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	98.0	7.6e-19
WP_000139423.1|3241_3352_+	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_000382163.1|3338_3539_+	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
WP_160210569.1|4156_5377_-|integrase	site-specific integrase	integrase	Q4ZE80	Staphylococcus_phage	47.3	1.1e-99
WP_000281657.1|7459_7918_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0H4J322	Staphylococcus_phage	83.0	5.1e-66
WP_001260004.1|7929_8262_-	helix-turn-helix transcriptional regulator	NA	A0A1J0MFC1	Staphylococcus_phage	74.5	1.6e-37
WP_160210499.1|8451_8712_+	helix-turn-helix transcriptional regulator	NA	A0A2H4J9X2	uncultured_Caudovirales_phage	93.5	3.8e-34
WP_000784875.1|8987_9134_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001058486.1|9126_9336_+	hypothetical protein	NA	Q4ZE76	Staphylococcus_phage	94.2	1.7e-29
WP_001103942.1|9338_9659_+	DUF1474 family protein	NA	Q4ZE75	Staphylococcus_phage	51.9	1.3e-20
WP_001039168.1|12358_12721_+	hypothetical protein	NA	A0A1W6JQD5	Staphylococcus_phage	99.2	8.9e-66
10255:10269	attR	TTTATTAAGCGAGTG	NA	NA	NA	NA
