The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP022375	Providencia rettgeri strain BML2576	4351300	1658571	1736470	4351300	terminase,integrase,holin,head,tRNA,tail,capsid,portal	Cronobacter_phage(51.11%)	89	1677771:1677816	1707209:1707254
WP_112307238.1|1658571_1659336_+|tail	phage tail protein	tail	E5AGC6	Erwinia_phage	26.4	2.0e-14
WP_144140886.1|1659392_1661015_-	hypothetical protein	NA	B9UDL6	Salmonella_phage	31.4	2.7e-53
WP_112307250.1|1661942_1662308_-	GtrA family protein	NA	B9UDL8	Salmonella_phage	58.0	6.5e-32
WP_164455340.1|1663137_1664700_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164455342.1|1664766_1665738_-	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
WP_164455345.1|1665906_1666338_-	antitermination protein Q	NA	B6SCZ7	Bacteriophage	45.1	4.1e-25
WP_164455346.1|1666550_1667570_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164455349.1|1667714_1668188_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164455350.1|1668222_1669428_-	ImmA/IrrE family metallo-endopeptidase	NA	B6SBZ6	Clostridium_virus	28.2	9.3e-35
WP_164455352.1|1669424_1670072_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164455354.1|1670122_1670311_+	hypothetical protein	NA	A0A1W6JPK3	Morganella_phage	66.7	2.1e-10
WP_164455356.1|1670323_1670464_+	ash family protein	NA	NA	NA	NA	NA
WP_164455358.1|1670460_1670634_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
WP_164455360.1|1670626_1670818_+	hypothetical protein	NA	NA	NA	NA	NA
WP_164455361.1|1670978_1671182_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_164455363.1|1671186_1671384_+	hypothetical protein	NA	NA	NA	NA	NA
WP_164455364.1|1671387_1674258_+	DUF927 domain-containing protein	NA	NA	NA	NA	NA
WP_164455365.1|1674377_1675217_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164455367.1|1675283_1676021_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164455369.1|1676022_1677288_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1B5FPC6	Escherichia_phage	44.7	5.8e-96
1677771:1677816	attL	TTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTTCTACAT	NA	NA	NA	NA
WP_164455370.1|1677982_1678999_-|integrase	tyrosine-type recombinase/integrase	integrase	F1BUN9	Cronobacter_phage	83.4	1.4e-169
WP_164455372.1|1679004_1679589_-	phage repressor protein	NA	A0A218M4J1	Erwinia_phage	37.9	1.8e-28
WP_036952399.1|1679711_1679912_+	MerR family transcriptional regulator	NA	F1BUN7	Cronobacter_phage	42.9	2.0e-06
WP_048608898.1|1679973_1680483_+	phage regulatory CII family protein	NA	A0A1S6L008	Salmonella_phage	50.9	1.8e-40
WP_164455374.1|1680485_1680773_+	hypothetical protein	NA	NA	NA	NA	NA
WP_164455376.1|1680783_1680939_+	hypothetical protein	NA	NA	NA	NA	NA
WP_164456294.1|1680942_1681299_+	DUF5347 family protein	NA	NA	NA	NA	NA
WP_164456296.1|1681409_1681622_+	DUF2732 family protein	NA	NA	NA	NA	NA
WP_164456298.1|1681611_1683744_+	replication endonuclease	NA	F1BUM9	Cronobacter_phage	54.1	1.8e-182
WP_164455377.1|1683745_1684444_+	hypothetical protein	NA	Q94MZ6	Haemophilus_virus	36.2	8.4e-12
WP_164455379.1|1684457_1684829_+	hypothetical protein	NA	H9C172	Pectobacterium_phage	61.3	2.7e-33
WP_096864691.1|1684949_1685171_+	hypothetical protein	NA	NA	NA	NA	NA
WP_164455382.1|1685156_1685474_-	ogr/Delta-like zinc finger family protein	NA	F1BUM8	Cronobacter_phage	55.8	6.4e-28
WP_164455384.1|1685473_1686505_-|portal	phage portal protein	portal	F1BUM7	Cronobacter_phage	62.3	7.8e-123
WP_164455386.1|1686504_1688292_-|terminase	terminase	terminase	F1BUM5	Cronobacter_phage	64.4	1.0e-223
WP_164455387.1|1688453_1689236_+|capsid	phage capsid protein	capsid	F1BUM4	Cronobacter_phage	42.9	1.6e-43
WP_048608874.1|1689257_1690286_+|capsid	phage major capsid protein, P2 family	capsid	F1BUM2	Cronobacter_phage	73.7	7.0e-140
WP_164455406.1|1690289_1690997_+|terminase	terminase	terminase	F1BUM0	Cronobacter_phage	53.0	2.0e-61
WP_048608870.1|1691098_1691323_+	hypothetical protein	NA	NA	NA	NA	NA
WP_164455408.1|1691336_1691789_+|head	head completion/stabilization protein	head	F1BUL8	Cronobacter_phage	51.3	3.2e-36
WP_164455410.1|1691785_1692265_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_164455412.1|1692254_1692968_+	hypothetical protein	NA	F1BUL6	Cronobacter_phage	59.5	3.1e-70
WP_164455414.1|1692980_1694099_+	DUF2586 family protein	NA	F1BUL5	Cronobacter_phage	63.7	2.2e-131
WP_048608860.1|1694098_1694554_+	DUF2597 family protein	NA	F1BUL4	Cronobacter_phage	64.2	1.2e-51
WP_048608858.1|1694570_1694864_+|holin	holin	holin	Q6K1I2	Salmonella_virus	48.8	2.4e-13
WP_048608857.1|1694860_1695271_+	structural protein	NA	A0A0A0RQM4	Escherichia_phage	46.2	1.6e-26
WP_164455416.1|1695267_1695645_+	hypothetical protein	NA	F1BUL2	Cronobacter_phage	50.9	7.4e-23
WP_096864679.1|1695746_1696010_+	hypothetical protein	NA	A5X9I7	Aeromonas_virus	61.9	1.8e-20
WP_164455418.1|1696197_1698297_+|tail	phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	45.2	4.7e-159
WP_048608849.1|1698289_1698625_+	DUF2590 family protein	NA	F1BUK8	Cronobacter_phage	68.3	8.3e-34
WP_164455420.1|1698614_1699805_+	hypothetical protein	NA	F1BUK6	Cronobacter_phage	62.3	2.1e-143
WP_164455421.1|1699791_1700409_+	hypothetical protein	NA	F1BUK5	Cronobacter_phage	62.4	3.4e-65
WP_164455423.1|1700421_1702464_+|tail	phage tail protein	tail	F1BUK3	Cronobacter_phage	55.7	1.0e-89
WP_164455426.1|1702463_1703081_+|tail	tail fiber assembly protein	tail	Q9MCR5	Enterobacteria_phage	40.4	2.7e-30
WP_164456299.1|1703125_1703839_+	hypothetical protein	NA	F1BUK1	Cronobacter_phage	36.2	1.1e-35
WP_164455428.1|1703783_1704350_+	hypothetical protein	NA	F1BUJ9	Cronobacter_phage	52.8	1.3e-39
WP_164455430.1|1704352_1706029_+	hypothetical protein	NA	F1BUJ7	Cronobacter_phage	49.4	1.0e-135
WP_048607893.1|1706584_1707097_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_004265004.1|1707621_1708104_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	8.0e-30
1707209:1707254	attR	TTGGTGGAGCTGGCGGGAGTTGAACCCGCGTCCGAAATTTCTACAT	NA	NA	NA	NA
WP_004265003.1|1708218_1708692_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_036959067.1|1708684_1708981_+	RnfH family protein	NA	NA	NA	NA	NA
WP_004265001.1|1709154_1709547_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_144140241.1|1709659_1711321_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_164455432.1|1711407_1712307_-	NAD(+) kinase	NA	NA	NA	NA	NA
WP_004264998.1|1712408_1713002_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_110591984.1|1713055_1713736_-	uracil-DNA glycosylase	NA	A0A0R5YU95	Harp_seal_herpesvirus	48.5	6.6e-54
WP_036959024.1|1714116_1714500_+	autonomous glycyl radical cofactor GrcA	NA	A0A1W5N098	Cronobacter_phage	69.2	4.0e-32
WP_164455434.1|1714658_1716104_+	phospholipase	NA	NA	NA	NA	NA
WP_004264992.1|1716136_1717474_-	ATP-dependent RNA helicase SrmB	NA	A0A1V0SIR5	Klosneuvirus	29.8	1.3e-45
WP_036959023.1|1717665_1718871_-	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_110591980.1|1719267_1720185_-	formimidoylglutamase	NA	NA	NA	NA	NA
WP_004912819.1|1720187_1720919_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_094961686.1|1721077_1721812_+	methyltransferase	NA	NA	NA	NA	NA
WP_164455436.1|1721842_1723438_-	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_004264984.1|1723832_1724411_+	RNA polymerase sigma factor RpoE	NA	A0A0F6TH34	Sinorhizobium_phage	26.2	8.2e-05
WP_164455438.1|1724469_1725093_+	anti-sigma-E factor RseA	NA	NA	NA	NA	NA
WP_004264982.1|1725092_1726043_+	sigma-E factor regulatory protein RseB	NA	NA	NA	NA	NA
WP_004264981.1|1726046_1726511_+	SoxR-reducing system protein RseC	NA	NA	NA	NA	NA
WP_036959062.1|1726914_1728708_+	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.8	9.3e-23
WP_004264979.1|1728725_1729691_+	signal peptidase I	NA	NA	NA	NA	NA
WP_004264978.1|1729993_1730674_+	ribonuclease III	NA	E5EQH1	Micromonas_sp._RCC1109_virus	32.4	2.5e-21
WP_004264976.1|1730670_1731579_+	GTPase Era	NA	NA	NA	NA	NA
WP_004264975.1|1731590_1732319_+	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_164455440.1|1732607_1733339_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_164455442.1|1733338_1733725_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_036959019.1|1733812_1734073_-	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.5	3.4e-19
WP_004264971.1|1734614_1735064_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164455444.1|1735244_1735892_+	leucine efflux protein LeuE	NA	NA	NA	NA	NA
WP_004264969.1|1735987_1736470_+|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
>prophage 2
NZ_AP022375	Providencia rettgeri strain BML2576	4351300	2979286	3025141	4351300	plate,protease	Cronobacter_phage(50.0%)	40	NA	NA
WP_004255990.1|2979286_2979718_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_004255992.1|2979725_2981501_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_110591490.1|2981464_2982502_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_004908049.1|2982507_2983773_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_004908047.1|2983774_2984326_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_004908045.1|2984327_2985686_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_004256004.1|2985678_2986434_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_094960748.1|2986442_2989064_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	32.1	3.2e-88
WP_004908041.1|2989060_2989849_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004256010.1|2989850_2990501_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
WP_164455799.1|2990506_2991955_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_144140137.1|2991954_2995503_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_080544468.1|2995536_2996892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_164455801.1|2996884_2998621_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_164455803.1|2999122_2999302_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164455804.1|2999320_2999950_-	DUF1851 domain-containing protein	NA	NA	NA	NA	NA
WP_094960742.1|3000044_3000437_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_164455806.1|3000429_3001719_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094960741.1|3001744_3002707_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140170760.1|3002706_3004290_-	DUF4150 domain-containing protein	NA	NA	NA	NA	NA
WP_164455808.1|3004290_3005310_-	3-oxoacyl-ACP synthase	NA	NA	NA	NA	NA
WP_094960738.1|3005311_3006364_-	DUF2169 domain-containing protein	NA	NA	NA	NA	NA
WP_094960737.1|3006378_3006909_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164455810.1|3006911_3009101_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
WP_004250011.1|3009185_3009704_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_164455812.1|3010318_3010894_-	YcxB family protein	NA	NA	NA	NA	NA
WP_096864213.1|3011099_3011564_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004256090.1|3012688_3013018_+	TusE/DsrC/DsvC family sulfur relay protein	NA	NA	NA	NA	NA
WP_004256093.1|3013025_3013304_-	hypothetical protein	NA	NA	NA	NA	NA
WP_036958162.1|3013527_3013845_+	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_004256099.1|3013928_3014342_-	CoA-binding protein	NA	NA	NA	NA	NA
WP_004256102.1|3014456_3014915_+	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_112308202.1|3014971_3017023_-	DNA helicase IV	NA	A7KV33	Bacillus_phage	25.1	7.9e-18
WP_140170768.1|3017146_3019297_+	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_096864215.1|3019392_3020007_-	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_036957904.1|3020238_3020760_+	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_004256113.1|3021115_3022207_+	porin OmpA	NA	NA	NA	NA	NA
WP_004256123.1|3022378_3022846_-	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_071585857.1|3023019_3023196_+	GhoT/OrtT family toxin	NA	NA	NA	NA	NA
WP_094960706.1|3023404_3025141_+|protease	Lon protease family protein	protease	NA	NA	NA	NA
>prophage 3
NZ_AP022375	Providencia rettgeri strain BML2576	4351300	3363389	3373970	4351300		Mycobacterium_phage(25.0%)	11	NA	NA
WP_094961795.1|3363389_3364601_+	D-alanyl-D-alanine carboxypeptidase DacA	NA	B6DZZ7	Stx2-converting_phage	49.3	2.3e-105
WP_004257083.1|3364751_3365015_+	YbeD family protein	NA	NA	NA	NA	NA
WP_036957959.1|3365230_3365860_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
WP_004257088.1|3365983_3366949_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_004257099.1|3367092_3367302_-	transcription antiterminator/RNA stability regulator CspE	NA	A0A1W6JNX5	Morganella_phage	78.1	3.5e-22
WP_004257101.1|3367518_3367977_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A2K9L300	Tupanvirus	46.7	7.1e-20
WP_036957963.1|3368265_3368493_+	glutaredoxin-like protein NrdH	NA	V5UN81	Mycobacterium_phage	56.2	3.6e-17
WP_004257105.1|3368501_3368915_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A142F1R4	Bacillus_phage	33.9	1.4e-11
WP_004257107.1|3368926_3371059_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	51.2	1.5e-205
WP_112307280.1|3371071_3372043_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	71.9	2.1e-133
WP_004257111.1|3372770_3373970_+	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	NA	G3M9Y6	Bacillus_virus	38.5	2.6e-29
