assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010365525.1_ASM1036552v1	NZ_CP048367	Escherichia coli strain 163 chromosome, complete genome	1	1120191-1120525	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCGA,GTGTTCCCCGCGCCAGCGGGGATAAACC	28,30,28	0	0	NA	NA	I-E:I-E:I-E	5,5,5	5	Unclear	cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA|47aa|up_1|NZ_CP048367.1_1118900_1119041_-,NA	NA|434aa|up_9|NZ_CP048367.1_1109597_1110899_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP048367.1_1110946_1113181_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP048367.1_1113258_1113507_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP048367.1_1113506_1113842_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP048367.1_1113912_1114704_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP048367.1_1114931_1116569_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP048367.1_1116656_1117955_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP048367.1_1118014_1118887_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP048367.1_1118900_1119041_-	NA	NA|224aa|up_0|NZ_CP048367.1_1119179_1119851_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP048367.1_1121162_1122641_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP048367.1_1122667_1123945_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP048367.1_1124263_1125049_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP048367.1_1125118_1126573_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP048367.1_1126594_1128004_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP048367.1_1127981_1128761_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|298aa|down_6|NZ_CP048367.1_1128724_1129618_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP048367.1_1129765_1130341_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP048367.1_1130357_1130618_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP048367.1_1130608_1131880_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_010365525.1_ASM1036552v1	NZ_CP048367	Escherichia coli strain 163 chromosome, complete genome	2	1146074-1146775	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Type I-E	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	7,11,11	11	TypeI-E	cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|571aa|up_9|NZ_CP048367.1_1134437_1136150_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP048367.1_1136224_1136959_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|889aa|up_7|NZ_CP048367.1_1137317_1139984_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|495aa|up_6|NZ_CP048367.1_1140422_1141907_+	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cse2gr11|161aa|up_5|NZ_CP048367.1_1141899_1142382_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|364aa|up_4|NZ_CP048367.1_1142394_1143486_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|225aa|up_3|NZ_CP048367.1_1143488_1144163_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|200aa|up_2|NZ_CP048367.1_1144149_1144749_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|306aa|up_1|NZ_CP048367.1_1144764_1145682_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|NZ_CP048367.1_1145683_1145968_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP048367.1_1146857_1147895_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP048367.1_1148146_1149055_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP048367.1_1149056_1150484_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP048367.1_1150483_1151089_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP048367.1_1151138_1151462_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP048367.1_1151655_1151967_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP048367.1_1151985_1152696_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP048367.1_1152695_1153175_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP048367.1_1153171_1154221_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP048367.1_1154201_1154963_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_010365525.1_ASM1036552v1	NZ_CP048367	Escherichia coli strain 163 chromosome, complete genome	3	1683802-1683919	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|62aa|up_9|NZ_CP048367.1_1673087_1673273_-	PRK09956, PRK09956, ISNCY family transposase	NA|300aa|up_8|NZ_CP048367.1_1673285_1674185_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_7|NZ_CP048367.1_1674377_1675568_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_6|NZ_CP048367.1_1675564_1676824_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_5|NZ_CP048367.1_1676813_1678442_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_4|NZ_CP048367.1_1678714_1680073_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_3|NZ_CP048367.1_1680077_1681154_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|217aa|up_2|NZ_CP048367.1_1681616_1682267_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP048367.1_1682320_1682575_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP048367.1_1682574_1683705_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP048367.1_1683938_1686224_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP048367.1_1686919_1690672_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP048367.1_1690799_1691522_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP048367.1_1691668_1694296_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP048367.1_1694444_1696133_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP048367.1_1696129_1696753_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP048367.1_1696896_1701291_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|NZ_CP048367.1_1701291_1702941_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|NZ_CP048367.1_1702945_1703722_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_9|NZ_CP048367.1_1703795_1704980_-	PRK05790, PRK05790, putative acyltransferase; Provisional
GCF_010365525.1_ASM1036552v1	NZ_CP048367	Escherichia coli strain 163 chromosome, complete genome	4	2285467-2285590	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA|30aa|down_7|NZ_CP048367.1_2294486_2294576_+	NA|471aa|up_9|NZ_CP048367.1_2274921_2276334_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP048367.1_2276890_2277100_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP048367.1_2277554_2278181_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP048367.1_2278201_2280304_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP048367.1_2280316_2280955_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP048367.1_2281018_2281687_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP048367.1_2281683_2282469_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP048367.1_2282472_2283285_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP048367.1_2283296_2284901_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP048367.1_2285026_2285332_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP048367.1_2285904_2287161_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP048367.1_2287201_2288575_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP048367.1_2288789_2289431_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP048367.1_2289470_2290619_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP048367.1_2290909_2292121_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP048367.1_2292233_2293166_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP048367.1_2293162_2294188_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP048367.1_2294486_2294576_+	NA	NA|390aa|down_8|NZ_CP048367.1_2294741_2295911_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP048367.1_2296145_2296727_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_010365525.1_ASM1036552v1	NZ_CP048367	Escherichia coli strain 163 chromosome, complete genome	5	2955714-2955805	5	CRISPRCasFinder	no		cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA|70aa|up_9|NZ_CP048367.1_2944790_2945000_-,NA	NA|70aa|up_9|NZ_CP048367.1_2944790_2945000_-	NA	NA|1321aa|up_8|NZ_CP048367.1_2945054_2949017_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP048367.1_2949056_2949695_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP048367.1_2949982_2951074_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP048367.1_2951073_2951766_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP048367.1_2951777_2952164_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP048367.1_2952171_2952972_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP048367.1_2952981_2953572_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP048367.1_2953582_2954077_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP048367.1_2954097_2955426_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP048367.1_2956228_2956825_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP048367.1_2956845_2957073_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP048367.1_2957110_2958352_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP048367.1_2958644_2959901_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP048367.1_2960161_2961082_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP048367.1_2961081_2961387_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP048367.1_2961538_2962138_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP048367.1_2962134_2964681_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP048367.1_2964680_2965853_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP048367.1_2965982_2966675_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_010365525.1_ASM1036552v1	NZ_CP048367	Escherichia coli strain 163 chromosome, complete genome	6	3217210-3217354	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|330aa|up_9|NZ_CP048367.1_3205108_3206098_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP048367.1_3206494_3207403_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP048367.1_3207594_3209616_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP048367.1_3210194_3210872_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP048367.1_3210864_3211620_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP048367.1_3211606_3212761_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP048367.1_3212757_3213798_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP048367.1_3213884_3215174_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP048367.1_3215232_3215709_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP048367.1_3215860_3217144_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP048367.1_3217377_3219639_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP048367.1_3219821_3221255_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP048367.1_3221330_3222383_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP048367.1_3222566_3223520_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP048367.1_3223560_3224556_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP048367.1_3224710_3225529_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP048367.1_3225529_3226588_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP048367.1_3226590_3227280_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP048367.1_3227279_3228053_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP048367.1_3228219_3228369_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_010365525.1_ASM1036552v1	NZ_CP048367	Escherichia coli strain 163 chromosome, complete genome	7	3467334-3467430	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|231aa|up_9|NZ_CP048367.1_3459129_3459822_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP048367.1_3460041_3460584_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP048367.1_3461054_3461921_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP048367.1_3461922_3462135_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP048367.1_3462242_3462764_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP048367.1_3462799_3464185_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP048367.1_3464358_3464853_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP048367.1_3464855_3465578_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP048367.1_3465695_3466205_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP048367.1_3466201_3467269_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP048367.1_3467463_3468357_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP048367.1_3468353_3469169_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP048367.1_3469179_3470439_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP048367.1_3470448_3472116_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NZ_CP048367.1_3472432_3473482_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NZ_CP048367.1_3473503_3474739_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|NZ_CP048367.1_3474749_3475535_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_7|NZ_CP048367.1_3475762_3476908_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|NZ_CP048367.1_3476929_3478231_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|NZ_CP048367.1_3478287_3479649_-	PRK08044, PRK08044, allantoinase AllB
GCF_010365525.1_ASM1036552v1	NZ_CP048367	Escherichia coli strain 163 chromosome, complete genome	8	3607472-3607616	8	CRISPRCasFinder	no		cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA|28aa|down_2|NZ_CP048367.1_3609661_3609745_-	NA|357aa|up_9|NZ_CP048367.1_3592610_3593681_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|194aa|up_8|NZ_CP048367.1_3593773_3594355_+	PRK10045, PRK10045, ACP phosphodiesterase	NA|606aa|up_7|NZ_CP048367.1_3594359_3596177_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|458aa|up_6|NZ_CP048367.1_3596332_3597706_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|up_5|NZ_CP048367.1_3597781_3599101_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|432aa|up_4|NZ_CP048367.1_3599507_3600803_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_3|NZ_CP048367.1_3600860_3601550_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|401aa|up_2|NZ_CP048367.1_3601739_3602942_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1049aa|up_1|NZ_CP048367.1_3602938_3606085_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|395aa|up_0|NZ_CP048367.1_3606210_3607395_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|303aa|down_0|NZ_CP048367.1_3607639_3608548_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|304aa|down_1|NZ_CP048367.1_3608672_3609584_+	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|28aa|down_2|NZ_CP048367.1_3609661_3609745_-	NA	NA|95aa|down_3|NZ_CP048367.1_3610230_3610515_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|226aa|down_4|NZ_CP048367.1_3610586_3611264_-	PRK10481, PRK10481, hypothetical protein; Provisional	NA|64aa|down_5|NZ_CP048367.1_3611521_3611713_-	PRK10380, PRK10380, hypothetical protein; Provisional	NA|175aa|down_6|NZ_CP048367.1_3611762_3612287_-	PRK03731, aroL, shikimate kinase AroL	NA|270aa|down_7|NZ_CP048367.1_3612959_3613769_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|372aa|down_8|NZ_CP048367.1_3613785_3614901_-	PRK10245, adrA, diguanylate cyclase AdrA; Provisional	NA|107aa|down_9|NZ_CP048367.1_3615002_3615323_-	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF
GCF_010365525.1_ASM1036552v1	NZ_CP048367	Escherichia coli strain 163 chromosome, complete genome	9	4070645-4070780	3	PILER-CR	no		cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Orphan	TGAATCACCAATATTGAAAA	20	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|126aa|up_9|NZ_CP048367.1_4061353_4061731_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|281aa|up_8|NZ_CP048367.1_4061737_4062580_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|160aa|up_7|NZ_CP048367.1_4062657_4063137_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP048367.1_4063328_4065191_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP048367.1_4065183_4065714_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP048367.1_4065821_4067153_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP048367.1_4067209_4067497_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP048367.1_4067493_4068780_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP048367.1_4068830_4069772_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP048367.1_4069786_4070557_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP048367.1_4071029_4072544_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP048367.1_4072574_4073717_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP048367.1_4073834_4075052_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|262aa|down_3|NZ_CP048367.1_4076787_4077573_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_4|NZ_CP048367.1_4077578_4078169_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_5|NZ_CP048367.1_4078287_4078683_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1073aa|down_6|NZ_CP048367.1_4078943_4082162_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_7|NZ_CP048367.1_4082179_4083328_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_8|NZ_CP048367.1_4083783_4084605_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_9|NZ_CP048367.1_4084771_4085686_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional
GCF_010365525.1_ASM1036552v1	NZ_CP048367	Escherichia coli strain 163 chromosome, complete genome	10	4250579-4250728	9	CRISPRCasFinder	no	RT	cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	Unclear	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,RT,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,DinG,c2c9_V-U4	NA|59aa|up_9|NZ_CP048367.1_4240150_4240327_-,NA|62aa|up_8|NZ_CP048367.1_4240514_4240700_+,NA|213aa|up_6|NZ_CP048367.1_4241396_4242035_-,NA	NA|59aa|up_9|NZ_CP048367.1_4240150_4240327_-	NA	NA|62aa|up_8|NZ_CP048367.1_4240514_4240700_+	NA	NA|77aa|up_7|NZ_CP048367.1_4240796_4241027_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|213aa|up_6|NZ_CP048367.1_4241396_4242035_-	NA	NA|421aa|up_5|NZ_CP048367.1_4242064_4243327_-	PRK09692, PRK09692, integrase; Provisional	NA|340aa|up_4|NZ_CP048367.1_4243771_4244791_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP048367.1_4244918_4246421_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP048367.1_4246581_4247664_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP048367.1_4247663_4248764_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP048367.1_4249030_4250542_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP048367.1_4250895_4251339_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP048367.1_4251338_4254194_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|396aa|down_2|NZ_CP048367.1_4254245_4255433_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP048367.1_4255625_4256129_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP048367.1_4256174_4256591_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP048367.1_4256752_4257757_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|151aa|down_6|NZ_CP048367.1_4259679_4260132_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_7|NZ_CP048367.1_4260276_4260870_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_8|NZ_CP048367.1_4260940_4261654_+	PRK12742, PRK12742, SDR family oxidoreductase	NA|132aa|down_9|NZ_CP048367.1_4261784_4262180_+	cd02198, YjgH_like, YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
