assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010365785.1_ASM1036578v1	NZ_CP048387	Spiroplasma sp. TIUS-1 chromosome, complete genome	1	193656-193996	1	PILER-CR	no		cas3,DEDDh	Orphan	TAATTTTAATCAAGATATTGGAAATTGAGATACATCAAGTG	41	0	0	NA	NA	NA	4	4	Orphan	cas3,DEDDh	NA|231aa|up_8|NZ_CP048387.1_177193_177886_+,NA|231aa|up_0|NZ_CP048387.1_191991_192684_+,NA|253aa|down_0|NZ_CP048387.1_194577_195336_-,NA|178aa|down_1|NZ_CP048387.1_195375_195909_-,NA|208aa|down_7|NZ_CP048387.1_201314_201938_+	NA|134aa|up_9|NZ_CP048387.1_176719_177121_+	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE	NA|231aa|up_8|NZ_CP048387.1_177193_177886_+	NA	NA|1426aa|up_7|NZ_CP048387.1_177921_182199_+	pfam02687, FtsX, FtsX-like permease family	NA|307aa|up_6|NZ_CP048387.1_182229_183150_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|269aa|up_5|NZ_CP048387.1_183262_184069_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|864aa|up_4|NZ_CP048387.1_184171_186763_+	COG1299, FruA, Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism]	NA|183aa|up_3|NZ_CP048387.1_186952_187501_+	COG1214, COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|668aa|up_2|NZ_CP048387.1_187537_189541_-	TIGR03062, hypothetical_protein_lp_1332, YhgE/Pip C-terminal domain	NA|398aa|up_1|NZ_CP048387.1_190795_191989_+	cd03249, ABC_MTABC3_MDL1_MDL2, ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins	NA|231aa|up_0|NZ_CP048387.1_191991_192684_+	NA	NA|253aa|down_0|NZ_CP048387.1_194577_195336_-	NA	NA|178aa|down_1|NZ_CP048387.1_195375_195909_-	NA	NA|476aa|down_2|NZ_CP048387.1_195991_197419_+	PRK08661, PRK08661, prolyl-tRNA synthetase; Provisional	NA|313aa|down_3|NZ_CP048387.1_197429_198368_+	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|173aa|down_4|NZ_CP048387.1_198443_198962_+	PRK13662, PRK13662, hypothetical protein; Provisional	NA|602aa|down_5|NZ_CP048387.1_199073_200879_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|111aa|down_6|NZ_CP048387.1_200924_201257_+	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit	NA|208aa|down_7|NZ_CP048387.1_201314_201938_+	NA	NA|104aa|down_8|NZ_CP048387.1_202239_202551_+	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|728aa|down_9|NZ_CP048387.1_202587_204771_+	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism]
GCF_010365785.1_ASM1036578v1	NZ_CP048387	Spiroplasma sp. TIUS-1 chromosome, complete genome	2	216453-217006	1,1,2	CRISPRCasFinder,CRT,PILER-CR	no		cas3,DEDDh	Orphan	CATATTTGTTACATTTGATGTATTTCAA,CATATTTGTTACATTTGATGTAT,ATTGAGATACATCAAATGTAACAAATATG	28,23,29	0	0	NA	NA	NA:NA:NA	7,7,3	7	Orphan	cas3,DEDDh	NA|494aa|up_9|NZ_CP048387.1_206275_207757_+,NA|65aa|up_5|NZ_CP048387.1_210418_210613_-,NA|271aa|up_2|NZ_CP048387.1_212288_213101_+,NA|284aa|up_0|NZ_CP048387.1_215081_215933_+,NA|243aa|down_5|NZ_CP048387.1_225575_226304_+	NA|494aa|up_9|NZ_CP048387.1_206275_207757_+	NA	NA|250aa|up_8|NZ_CP048387.1_207769_208519_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|365aa|up_7|NZ_CP048387.1_208589_209684_+	pfam05913, DUF871, Bacterial protein of unknown function (DUF871)	NA|130aa|up_6|NZ_CP048387.1_209794_210184_+	pfam08877, MepB, MepB protein	NA|65aa|up_5|NZ_CP048387.1_210418_210613_-	NA	NA|223aa|up_4|NZ_CP048387.1_210684_211353_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|305aa|up_3|NZ_CP048387.1_211360_212275_+	TIGR02349, Chaperone_protein_DnaJ, chaperone protein DnaJ	NA|271aa|up_2|NZ_CP048387.1_212288_213101_+	NA	NA|607aa|up_1|NZ_CP048387.1_213148_214969_+	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms]	NA|284aa|up_0|NZ_CP048387.1_215081_215933_+	NA	NA|399aa|down_0|NZ_CP048387.1_217614_218811_+	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|277aa|down_1|NZ_CP048387.1_218963_219794_+	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|286aa|down_2|NZ_CP048387.1_220443_221301_+	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins	NA|412aa|down_3|NZ_CP048387.1_221405_222641_+	COG0013, AlaS, Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	NA|899aa|down_4|NZ_CP048387.1_222783_225480_+	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair]	NA|243aa|down_5|NZ_CP048387.1_225575_226304_+	NA	NA|271aa|down_6|NZ_CP048387.1_226365_227178_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|301aa|down_7|NZ_CP048387.1_227376_228279_-	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|567aa|down_8|NZ_CP048387.1_228296_229997_-	PRK09586, murP, PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed	NA|259aa|down_9|NZ_CP048387.1_230091_230868_-	COG1737, RpiR, Transcriptional regulators [Transcription]
GCF_010365785.1_ASM1036578v1	NZ_CP048387	Spiroplasma sp. TIUS-1 chromosome, complete genome	3	324948-325214	3,2,2	PILER-CR,CRT,CRISPRCasFinder	no		cas3,DEDDh	Orphan	AAATTTTAATCAAGATATTTCTTCTTGGGATGTATCAAATGTAACAAATATG,TTTAATCAAGATATTTCTTCTTGGGATGTATCAAATGTAAC,TCAAGATATTTCTTCTTGGGATGTATCAAATGTAAC	52,41,36	0	0	NA	NA	NA:NA:NA	2,3,3	3	Orphan	cas3,DEDDh	NA|258aa|up_9|NZ_CP048387.1_309061_309835_+,NA|651aa|up_7|NZ_CP048387.1_310608_312561_+,NA|221aa|up_6|NZ_CP048387.1_312644_313307_+,NA|109aa|up_2|NZ_CP048387.1_321911_322238_-,NA|132aa|up_1|NZ_CP048387.1_322307_322703_-,NA|144aa|up_0|NZ_CP048387.1_324299_324731_-,NA|199aa|down_6|NZ_CP048387.1_343225_343822_+,NA|251aa|down_7|NZ_CP048387.1_344008_344761_+	NA|258aa|up_9|NZ_CP048387.1_309061_309835_+	NA	NA|245aa|up_8|NZ_CP048387.1_309863_310598_+	pfam14126, DUF4293, Domain of unknown function (DUF4293)	NA|651aa|up_7|NZ_CP048387.1_310608_312561_+	NA	NA|221aa|up_6|NZ_CP048387.1_312644_313307_+	NA	NA|523aa|up_5|NZ_CP048387.1_313320_314889_+	PRK13531, PRK13531, regulatory ATPase RavA; Provisional	NA|511aa|up_4|NZ_CP048387.1_314907_316440_+	PRK10997, yieM, ATPase RavA stimulator ViaA	NA|203aa|up_3|NZ_CP048387.1_320163_320772_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|109aa|up_2|NZ_CP048387.1_321911_322238_-	NA	NA|132aa|up_1|NZ_CP048387.1_322307_322703_-	NA	NA|144aa|up_0|NZ_CP048387.1_324299_324731_-	NA	NA|163aa|down_0|NZ_CP048387.1_329379_329868_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|270aa|down_1|NZ_CP048387.1_331908_332718_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|847aa|down_2|NZ_CP048387.1_332956_335497_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|871aa|down_3|NZ_CP048387.1_335651_338264_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|824aa|down_4|NZ_CP048387.1_338564_341036_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|536aa|down_5|NZ_CP048387.1_341569_343177_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|199aa|down_6|NZ_CP048387.1_343225_343822_+	NA	NA|251aa|down_7|NZ_CP048387.1_344008_344761_+	NA	NA|138aa|down_8|NZ_CP048387.1_344787_345201_-	TIGR00521, coaBC_dfp, phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase	NA|154aa|down_9|NZ_CP048387.1_345808_346270_+	pfam02464, CinA, Competence-damaged protein
GCF_010365785.1_ASM1036578v1	NZ_CP048387	Spiroplasma sp. TIUS-1 chromosome, complete genome	4	337942-338191	3	CRISPRCasFinder	no		cas3,DEDDh	Orphan	ATATTTCTGCTTGGGATGTATCAAATGT	28	0	0	NA	NA	NA	3	3	Orphan	cas3,DEDDh	NA|221aa|up_9|NZ_CP048387.1_312644_313307_+,NA|109aa|up_5|NZ_CP048387.1_321911_322238_-,NA|132aa|up_4|NZ_CP048387.1_322307_322703_-,NA|144aa|up_3|NZ_CP048387.1_324299_324731_-,NA|199aa|down_2|NZ_CP048387.1_343225_343822_+,NA|251aa|down_3|NZ_CP048387.1_344008_344761_+	NA|221aa|up_9|NZ_CP048387.1_312644_313307_+	NA	NA|523aa|up_8|NZ_CP048387.1_313320_314889_+	PRK13531, PRK13531, regulatory ATPase RavA; Provisional	NA|511aa|up_7|NZ_CP048387.1_314907_316440_+	PRK10997, yieM, ATPase RavA stimulator ViaA	NA|203aa|up_6|NZ_CP048387.1_320163_320772_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|109aa|up_5|NZ_CP048387.1_321911_322238_-	NA	NA|132aa|up_4|NZ_CP048387.1_322307_322703_-	NA	NA|144aa|up_3|NZ_CP048387.1_324299_324731_-	NA	NA|163aa|up_2|NZ_CP048387.1_329379_329868_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|270aa|up_1|NZ_CP048387.1_331908_332718_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|847aa|up_0|NZ_CP048387.1_332956_335497_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|824aa|down_0|NZ_CP048387.1_338564_341036_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|536aa|down_1|NZ_CP048387.1_341569_343177_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|199aa|down_2|NZ_CP048387.1_343225_343822_+	NA	NA|251aa|down_3|NZ_CP048387.1_344008_344761_+	NA	NA|138aa|down_4|NZ_CP048387.1_344787_345201_-	TIGR00521, coaBC_dfp, phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase	NA|154aa|down_5|NZ_CP048387.1_345808_346270_+	pfam02464, CinA, Competence-damaged protein	NA|344aa|down_6|NZ_CP048387.1_346306_347338_+	PRK09354, recA, recombinase A; Provisional	NA|515aa|down_7|NZ_CP048387.1_347390_348935_+	PRK12704, PRK12704, phosphodiesterase; Provisional	NA|321aa|down_8|NZ_CP048387.1_348955_349918_+	cd07062, Peptidase_S66_mccF_like, Microcin C7 self-immunity protein determines resistance to exogenous microcin C7	NA|447aa|down_9|NZ_CP048387.1_349991_351332_+	PRK10867, PRK10867, signal recognition particle protein; Provisional
GCF_010365785.1_ASM1036578v1	NZ_CP048387	Spiroplasma sp. TIUS-1 chromosome, complete genome	5	375730-375878	4	CRISPRCasFinder	no	cas3	cas3,DEDDh	Unclear	CAGCAGCTAAAAAACCAGCAGTGAAATCAACA	32	0	0	NA	NA	NA	2	2	Unclear	cas3,DEDDh	NA|808aa|up_9|NZ_CP048387.1_363990_366414_+,NA|539aa|up_7|NZ_CP048387.1_367803_369420_+,NA|111aa|up_4|NZ_CP048387.1_371319_371652_+,NA|105aa|down_0|NZ_CP048387.1_376050_376365_+,NA|133aa|down_3|NZ_CP048387.1_381707_382106_+,NA|246aa|down_4|NZ_CP048387.1_382215_382953_+,NA|166aa|down_7|NZ_CP048387.1_384982_385480_+,NA|386aa|down_9|NZ_CP048387.1_385919_387077_+	NA|808aa|up_9|NZ_CP048387.1_363990_366414_+	NA	NA|442aa|up_8|NZ_CP048387.1_366475_367801_+	PRK05335, PRK05335, tRNA (uracil-5-)-methyltransferase Gid; Reviewed	NA|539aa|up_7|NZ_CP048387.1_367803_369420_+	NA	NA|293aa|up_6|NZ_CP048387.1_369409_370288_+	cd01610, PAP2_like, PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies	NA|251aa|up_5|NZ_CP048387.1_370299_371052_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|111aa|up_4|NZ_CP048387.1_371319_371652_+	NA	cas3|541aa|up_3|NZ_CP048387.1_371691_373314_-	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|135aa|up_2|NZ_CP048387.1_373529_373934_+	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed	NA|165aa|up_1|NZ_CP048387.1_373933_374428_+	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional	NA|241aa|up_0|NZ_CP048387.1_374427_375150_+	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed	NA|105aa|down_0|NZ_CP048387.1_376050_376365_+	NA	NA|591aa|down_1|NZ_CP048387.1_376502_378275_+	TIGR01998, N-acetylglucosamine_and_glucose_PTS, PTS system, N-acetylglucosamine-specific IIBC component	NA|1042aa|down_2|NZ_CP048387.1_378380_381506_+	cd06543, GH18_PF-ChiA-like, PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain	NA|133aa|down_3|NZ_CP048387.1_381707_382106_+	NA	NA|246aa|down_4|NZ_CP048387.1_382215_382953_+	NA	NA|429aa|down_5|NZ_CP048387.1_382956_384243_+	PRK12297, obgE, GTPase CgtA; Reviewed	NA|241aa|down_6|NZ_CP048387.1_384245_384968_+	cd00553, NAD_synthase, NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD)	NA|166aa|down_7|NZ_CP048387.1_384982_385480_+	NA	NA|86aa|down_8|NZ_CP048387.1_385628_385886_+	TIGR04561, hypothetical_protein_SCULI_v1c03640, integral membrane protein	NA|386aa|down_9|NZ_CP048387.1_385919_387077_+	NA
