assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010669105.1_ASM1066910v1	NZ_CP048621	Providencia stuartii strain MF1 chromosome, complete genome	1	1397514-1398081	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	csa3	cas3,WYL,DEDDh,csa3,cas14j,DinG,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,RT,c2c9_V-U4	Type I-A	GTGTACTGCCGTATAGGCAGCTTAGAAA,GTGTACTGCCGTATAGGCAGCTTAGAAA,GTGTACTGCCGTATAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	9,9,9	9	Orphan	cas3,WYL,DEDDh,csa3,cas14j,DinG,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,RT,c2c9_V-U4	NA|381aa|up_9|NZ_CP048621.1_1388117_1389260_+,NA|116aa|down_0|NZ_CP048621.1_1398234_1398582_+,NA|107aa|down_1|NZ_CP048621.1_1398582_1398903_+,NA|111aa|down_3|NZ_CP048621.1_1400272_1400605_-,NA|191aa|down_4|NZ_CP048621.1_1401622_1402195_+,NA|139aa|down_7|NZ_CP048621.1_1409218_1409635_-	NA|381aa|up_9|NZ_CP048621.1_1388117_1389260_+	NA	NA|71aa|up_8|NZ_CP048621.1_1389724_1389937_-	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|286aa|up_7|NZ_CP048621.1_1389954_1390812_-	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	csa3|112aa|up_6|NZ_CP048621.1_1391430_1391766_+	PRK10141, PRK10141, DNA-binding transcriptional repressor ArsR; Provisional	NA|122aa|up_5|NZ_CP048621.1_1391813_1392179_+	pfam06953, ArsD, Arsenical resistance operon trans-acting repressor ArsD	NA|584aa|up_4|NZ_CP048621.1_1392192_1393944_+	TIGR04291, Arsenical_pump-driving_ATPase, arsenical pump-driving ATPase	NA|430aa|up_3|NZ_CP048621.1_1393999_1395289_+	PRK15445, PRK15445, arsenical efflux pump membrane protein ArsB	NA|142aa|up_2|NZ_CP048621.1_1395299_1395725_+	PRK10026, PRK10026, arsenate reductase (glutaredoxin)	NA|39aa|up_1|NZ_CP048621.1_1395752_1395869_-	pfam11682, zinc_ribbon_11, Probable zinc-ribbon	NA|394aa|up_0|NZ_CP048621.1_1396127_1397308_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|116aa|down_0|NZ_CP048621.1_1398234_1398582_+	NA	NA|107aa|down_1|NZ_CP048621.1_1398582_1398903_+	NA	NA|308aa|down_2|NZ_CP048621.1_1399180_1400104_+	PRK08025, PRK08025, kdo(2)-lipid IV(A) palmitoleoyltransferase	NA|111aa|down_3|NZ_CP048621.1_1400272_1400605_-	NA	NA|191aa|down_4|NZ_CP048621.1_1401622_1402195_+	NA	NA|472aa|down_5|NZ_CP048621.1_1403253_1404669_+	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|477aa|down_6|NZ_CP048621.1_1406997_1408428_+	PRK09852, PRK09852, cryptic 6-phospho-beta-glucosidase; Provisional	NA|139aa|down_7|NZ_CP048621.1_1409218_1409635_-	NA	NA|366aa|down_8|NZ_CP048621.1_1409870_1410968_-	PRK10370, PRK10370, formate-dependent nitrite reductase complex subunit NrfG; Provisional	NA|627aa|down_9|NZ_CP048621.1_1410960_1412841_-	PRK10369, PRK10369, heme lyase subunit NrfE; Provisional
GCF_010669105.1_ASM1066910v1	NZ_CP048621	Providencia stuartii strain MF1 chromosome, complete genome	2	1788238-1788494	2	PILER-CR	no		cas3,WYL,DEDDh,csa3,cas14j,DinG,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,RT,c2c9_V-U4	Orphan	CATACCAGATGGGTCGTTAGCTCAGTCGGTAGAGCAGTTGACTTTTAATCAAT	53	0	0	NA	NA	NA	2	2	Orphan	cas3,WYL,DEDDh,csa3,cas14j,DinG,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,RT,c2c9_V-U4	NA,NA	NA|86aa|up_9|NZ_CP048621.1_1776371_1776629_-	PRK10850, PRK10850, phosphocarrier protein Hpr	NA|318aa|up_8|NZ_CP048621.1_1776983_1777937_-	TIGR01139, Cysteine_synthase, cysteine synthase A	NA|255aa|up_7|NZ_CP048621.1_1778214_1778979_-	PRK04949, PRK04949, putative sulfate transport protein CysZ; Validated	NA|366aa|up_6|NZ_CP048621.1_1779243_1780341_+	PRK03427, PRK03427, cell division protein ZipA; Provisional	NA|672aa|up_5|NZ_CP048621.1_1780398_1782414_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|395aa|up_4|NZ_CP048621.1_1782645_1783830_+	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|72aa|up_3|NZ_CP048621.1_1783899_1784115_+	COG3530, COG3530, Uncharacterized protein conserved in bacteria [Function unknown]	NA|139aa|up_2|NZ_CP048621.1_1784125_1784542_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|251aa|up_1|NZ_CP048621.1_1784674_1785427_+	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG	NA|474aa|up_0|NZ_CP048621.1_1786024_1787446_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|98aa|down_0|NZ_CP048621.1_1790400_1790694_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|576aa|down_1|NZ_CP048621.1_1791061_1792789_-	PRK05326, PRK05326, potassium/proton antiporter	NA|223aa|down_2|NZ_CP048621.1_1793275_1793944_-	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|338aa|down_3|NZ_CP048621.1_1793940_1794954_-	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional	NA|487aa|down_4|NZ_CP048621.1_1794957_1796418_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|375aa|down_5|NZ_CP048621.1_1796422_1797547_-	TIGR04030, perox_Avi_7169, alkylhydroperoxidase domain protein, Avi_7169 family	NA|296aa|down_6|NZ_CP048621.1_1797719_1798607_+	cd13599, PBP2_lipoprotein_Gna1946, The membrane-associated lipoprotein Gna1946 from Neisseria meningitidis; the type 2 periplasmic binding protein fold	NA|246aa|down_7|NZ_CP048621.1_1798815_1799553_+	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|260aa|down_8|NZ_CP048621.1_1799737_1800517_+	cd05233, SDR_c, classical (c) SDRs	NA|265aa|down_9|NZ_CP048621.1_1800526_1801321_+	pfam17409, MoaF_C, MoaF C-terminal domain
GCF_010669105.1_ASM1066910v1	NZ_CP048621	Providencia stuartii strain MF1 chromosome, complete genome	3	2823278-2823485	3,2,2	PILER-CR,CRISPRCasFinder,CRT	no		cas3,WYL,DEDDh,csa3,cas14j,DinG,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,RT,c2c9_V-U4	Orphan	GTTCACTGCCGTATAGGCAGCTTAGAAA,TTTCTAAGCTGCCTATACGGCAGTGAAC,TTTCTAAGCTGCCTATACGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	3,3,3	3	Orphan	cas3,WYL,DEDDh,csa3,cas14j,DinG,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,RT,c2c9_V-U4	NA|144aa|up_6|NZ_CP048621.1_2814175_2814607_+,NA|55aa|down_2|NZ_CP048621.1_2825310_2825475_+,NA|165aa|down_6|NZ_CP048621.1_2829969_2830464_+	NA|265aa|up_9|NZ_CP048621.1_2809162_2809957_+	PRK13303, PRK13303, aspartate dehydrogenase	NA|490aa|up_8|NZ_CP048621.1_2809970_2811440_+	cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like	NA|548aa|up_7|NZ_CP048621.1_2811508_2813152_+	PRK07064, PRK07064, thiamine pyrophosphate-binding protein	NA|144aa|up_6|NZ_CP048621.1_2814175_2814607_+	NA	NA|252aa|up_5|NZ_CP048621.1_2814626_2815382_-	COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]	NA|1000aa|up_4|NZ_CP048621.1_2815430_2818430_-	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein	NA|487aa|up_3|NZ_CP048621.1_2818447_2819908_-	pfam04575, DUF560, Protein of unknown function (DUF560)	NA|255aa|up_2|NZ_CP048621.1_2819975_2820740_-	pfam01298, TbpB_B_D, C-lobe and N-lobe beta barrels of Tf-binding protein B	NA|122aa|up_1|NZ_CP048621.1_2822084_2822450_+	COG3544, COG3544, Uncharacterized protein conserved in bacteria [Function unknown]	NA|158aa|up_0|NZ_CP048621.1_2822575_2823049_-	pfam11776, RcnB, Nickel/cobalt transporter regulator	NA|99aa|down_0|NZ_CP048621.1_2823947_2824244_-	COG1359, COG1359, Uncharacterized conserved protein [Function unknown]	NA|181aa|down_1|NZ_CP048621.1_2824431_2824974_+	cd16017, LptA, Lipooligosaccharide Phosphoethanolamine Transferase A (LptA) or Lipid A Phosphoethanolamine Transferase	NA|55aa|down_2|NZ_CP048621.1_2825310_2825475_+	NA	NA|370aa|down_3|NZ_CP048621.1_2826120_2827229_-	pfam13683, rve_3, Integrase core domain	NA|76aa|down_4|NZ_CP048621.1_2827992_2828220_+	pfam13646, HEAT_2, HEAT repeats	NA|260aa|down_5|NZ_CP048621.1_2828795_2829575_-	CHL00071, tufA, elongation factor Tu	NA|165aa|down_6|NZ_CP048621.1_2829969_2830464_+	NA	NA|217aa|down_7|NZ_CP048621.1_2831136_2831787_-	pfam14485, DUF4431, Domain of unknown function (DUF4431)	NA|332aa|down_8|NZ_CP048621.1_2832517_2833513_+	COG3469, COG3469, Chitinase [Carbohydrate transport and metabolism]	NA|201aa|down_9|NZ_CP048621.1_2834299_2834902_-	cd03135, GATase1_DJ-1, Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1
GCF_010669105.1_ASM1066910v1	NZ_CP048621	Providencia stuartii strain MF1 chromosome, complete genome	4	2830625-2830892	4,3,3	PILER-CR,CRISPRCasFinder,CRT	no		cas3,WYL,DEDDh,csa3,cas14j,DinG,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,RT,c2c9_V-U4	Orphan	GTGTACTGCCGCATAGGCAGCTTAGAAA,TTTCTAAGCTGCCTATGCGGCAGTACAC,TTTCTAAGCTGCCTATGCGGCAGTACAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	4,4,4	4	Orphan	cas3,WYL,DEDDh,csa3,cas14j,DinG,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,RT,c2c9_V-U4	NA|55aa|up_4|NZ_CP048621.1_2825310_2825475_+,NA|165aa|up_0|NZ_CP048621.1_2829969_2830464_+,NA|113aa|down_3|NZ_CP048621.1_2835497_2835836_+	NA|255aa|up_9|NZ_CP048621.1_2819975_2820740_-	pfam01298, TbpB_B_D, C-lobe and N-lobe beta barrels of Tf-binding protein B	NA|122aa|up_8|NZ_CP048621.1_2822084_2822450_+	COG3544, COG3544, Uncharacterized protein conserved in bacteria [Function unknown]	NA|158aa|up_7|NZ_CP048621.1_2822575_2823049_-	pfam11776, RcnB, Nickel/cobalt transporter regulator	NA|99aa|up_6|NZ_CP048621.1_2823947_2824244_-	COG1359, COG1359, Uncharacterized conserved protein [Function unknown]	NA|181aa|up_5|NZ_CP048621.1_2824431_2824974_+	cd16017, LptA, Lipooligosaccharide Phosphoethanolamine Transferase A (LptA) or Lipid A Phosphoethanolamine Transferase	NA|55aa|up_4|NZ_CP048621.1_2825310_2825475_+	NA	NA|370aa|up_3|NZ_CP048621.1_2826120_2827229_-	pfam13683, rve_3, Integrase core domain	NA|76aa|up_2|NZ_CP048621.1_2827992_2828220_+	pfam13646, HEAT_2, HEAT repeats	NA|260aa|up_1|NZ_CP048621.1_2828795_2829575_-	CHL00071, tufA, elongation factor Tu	NA|165aa|up_0|NZ_CP048621.1_2829969_2830464_+	NA	NA|217aa|down_0|NZ_CP048621.1_2831136_2831787_-	pfam14485, DUF4431, Domain of unknown function (DUF4431)	NA|332aa|down_1|NZ_CP048621.1_2832517_2833513_+	COG3469, COG3469, Chitinase [Carbohydrate transport and metabolism]	NA|201aa|down_2|NZ_CP048621.1_2834299_2834902_-	cd03135, GATase1_DJ-1, Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1	NA|113aa|down_3|NZ_CP048621.1_2835497_2835836_+	NA	NA|219aa|down_4|NZ_CP048621.1_2837586_2838243_+	pfam02517, Abi, CAAX protease self-immunity	NA|592aa|down_5|NZ_CP048621.1_2838760_2840536_+	pfam05840, Phage_GPA, Bacteriophage replication gene A protein (GPA)	NA|593aa|down_6|NZ_CP048621.1_2840688_2842467_+	pfam10592, AIPR, AIPR protein	NA|363aa|down_7|NZ_CP048621.1_2842884_2843972_-	pfam00665, rve, Integrase core domain	NA|143aa|down_8|NZ_CP048621.1_2845069_2845498_-	pfam03245, Phage_lysis, Bacteriophage Rz lysis protein	NA|131aa|down_9|NZ_CP048621.1_2845516_2845909_-	cd14845, L-Ala-D-Glu_peptidase_like, L-Ala-D-Glu peptidase, also known as L-alanyl-D-glutamate endopeptidase
GCF_010669105.1_ASM1066910v1	NZ_CP048621	Providencia stuartii strain MF1 chromosome, complete genome	5	2849367-2849814	5,4,4	PILER-CR,CRISPRCasFinder,CRT	no		cas3,WYL,DEDDh,csa3,cas14j,DinG,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,RT,c2c9_V-U4	Orphan	GTTCACTGCCGTATAGGCAGCTTAGAAA,TTTCTAAGCTGCCTATACGGCAGTGAAC,TTTCTAAGCTGCCTATACGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	7,7,7	7	Orphan	cas3,WYL,DEDDh,csa3,cas14j,DinG,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,RT,c2c9_V-U4	NA|40aa|up_4|NZ_CP048621.1_2846360_2846480_-,NA|111aa|up_3|NZ_CP048621.1_2846664_2846997_+,NA|89aa|down_7|NZ_CP048621.1_2859154_2859421_-	NA|593aa|up_9|NZ_CP048621.1_2840688_2842467_+	pfam10592, AIPR, AIPR protein	NA|363aa|up_8|NZ_CP048621.1_2842884_2843972_-	pfam00665, rve, Integrase core domain	NA|143aa|up_7|NZ_CP048621.1_2845069_2845498_-	pfam03245, Phage_lysis, Bacteriophage Rz lysis protein	NA|131aa|up_6|NZ_CP048621.1_2845516_2845909_-	cd14845, L-Ala-D-Glu_peptidase_like, L-Ala-D-Glu peptidase, also known as L-alanyl-D-glutamate endopeptidase	NA|83aa|up_5|NZ_CP048621.1_2845901_2846150_-	pfam16083, Phage_holin_3_3, LydA holin phage, holin superfamily III	NA|40aa|up_4|NZ_CP048621.1_2846360_2846480_-	NA	NA|111aa|up_3|NZ_CP048621.1_2846664_2846997_+	NA	NA|159aa|up_2|NZ_CP048621.1_2847329_2847806_-	pfam07799, DUF1643, Protein of unknown function (DUF1643)	NA|260aa|up_1|NZ_CP048621.1_2847842_2848622_-	pfam03589, Antiterm, Antitermination protein	NA|119aa|up_0|NZ_CP048621.1_2848666_2849023_-	pfam16786, RecA_dep_nuc, Recombination enhancement, RecA-dependent nuclease	NA|183aa|down_0|NZ_CP048621.1_2851622_2852171_-	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|611aa|down_1|NZ_CP048621.1_2852228_2854061_-	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|229aa|down_2|NZ_CP048621.1_2854027_2854714_-	PRK09483, PRK09483, response regulator; Provisional	NA|411aa|down_3|NZ_CP048621.1_2854935_2856168_-	PRK13381, PRK13381, peptidase T; Provisional	NA|518aa|down_4|NZ_CP048621.1_2856203_2857757_-	COG2978, AbgT, Putative p-aminobenzoyl-glutamate transporter [Coenzyme metabolism]	NA|139aa|down_5|NZ_CP048621.1_2858051_2858468_-	PRK02833, PRK02833, phosphate-starvation-inducible protein PsiE; Provisional	NA|135aa|down_6|NZ_CP048621.1_2858676_2859081_-	COG3791, COG3791, Uncharacterized conserved protein [Function unknown]	NA|89aa|down_7|NZ_CP048621.1_2859154_2859421_-	NA	NA|491aa|down_8|NZ_CP048621.1_2859622_2861095_-	pfam13163, DUF3999, Protein of unknown function (DUF3999)	NA|930aa|down_9|NZ_CP048621.1_2861081_2863871_-	pfam10101, DUF2339, Predicted membrane protein (DUF2339)
GCF_010669105.1_ASM1066910v1	NZ_CP048621	Providencia stuartii strain MF1 chromosome, complete genome	6	2922514-2922902	6,5,5	PILER-CR,CRISPRCasFinder,CRT	no	cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,WYL	cas3,WYL,DEDDh,csa3,cas14j,DinG,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,RT,c2c9_V-U4	Type I-F	GTTCACTGCCGCATAGGCAGCTTAGAAA,TTTCTAAGCTGCCTATACGGCAGTGAAC,TTTCTAAGCTGCCTATGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	6,6,6	6	TypeI-F	cas3,WYL,DEDDh,csa3,cas14j,DinG,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,RT,c2c9_V-U4	NA,NA|124aa|down_6|NZ_CP048621.1_2932592_2932964_-,NA|131aa|down_7|NZ_CP048621.1_2932960_2933353_-,NA|288aa|down_8|NZ_CP048621.1_2933345_2934209_-	NA|455aa|up_9|NZ_CP048621.1_2913550_2914915_+	PRK07960, fliI, flagellum-specific ATP synthase FliI	NA|148aa|up_8|NZ_CP048621.1_2914925_2915369_+	PRK05689, fliJ, flagella biosynthesis chaperone FliJ	NA|454aa|up_7|NZ_CP048621.1_2915369_2916731_+	PRK10118, PRK10118, flagellar hook length control protein FliK	NA|161aa|up_6|NZ_CP048621.1_2916896_2917379_+	PRK07021, fliL, flagellar basal body-associated protein FliL; Reviewed	NA|336aa|up_5|NZ_CP048621.1_2917384_2918392_+	PRK06666, fliM, flagellar motor switch protein FliM; Validated	NA|139aa|up_4|NZ_CP048621.1_2918384_2918801_+	PRK07963, fliN, flagellar motor switch protein FliN; Validated	NA|143aa|up_3|NZ_CP048621.1_2918825_2919254_+	PRK11486, PRK11486, flagellar type III secretion system protein FliO	NA|248aa|up_2|NZ_CP048621.1_2919266_2920010_+	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed	NA|90aa|up_1|NZ_CP048621.1_2920019_2920289_+	PRK05700, fliQ, flagellar type III secretion system protein FliQ	NA|261aa|up_0|NZ_CP048621.1_2920291_2921074_+	PRK05701, fliR, flagellar type III secretion system protein FliR	cas6f|212aa|down_0|NZ_CP048621.1_2923042_2923678_-	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	cas7f|342aa|down_1|NZ_CP048621.1_2923686_2924712_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|316aa|down_2|NZ_CP048621.1_2924714_2925662_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|424aa|down_3|NZ_CP048621.1_2925658_2926930_-	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas3-cas2|1183aa|down_4|NZ_CP048621.1_2927080_2930629_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|326aa|down_5|NZ_CP048621.1_2930625_2931603_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|124aa|down_6|NZ_CP048621.1_2932592_2932964_-	NA	NA|131aa|down_7|NZ_CP048621.1_2932960_2933353_-	NA	NA|288aa|down_8|NZ_CP048621.1_2933345_2934209_-	NA	NA|245aa|down_9|NZ_CP048621.1_2934353_2935088_-	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane]
GCF_010669105.1_ASM1066910v1	NZ_CP048621	Providencia stuartii strain MF1 chromosome, complete genome	7	2974292-2974620	7,6,6	PILER-CR,CRISPRCasFinder,CRT	no	RT	cas3,WYL,DEDDh,csa3,cas14j,DinG,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,RT,c2c9_V-U4	Unclear	GTTCACTGCCGTATAGGCAGCTTAGAAA,TTTCTAAGCTGCCTATACGGCAGTGAAC,TTTCTAAGCTGCCTATACGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	5,5,5	5	Orphan	cas3,WYL,DEDDh,csa3,cas14j,DinG,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,RT,c2c9_V-U4	NA|140aa|up_8|NZ_CP048621.1_2961694_2962114_-,NA|668aa|up_7|NZ_CP048621.1_2963458_2965462_-,NA|311aa|up_2|NZ_CP048621.1_2971164_2972097_+,NA|185aa|up_1|NZ_CP048621.1_2972093_2972648_+,NA	NA|89aa|up_9|NZ_CP048621.1_2961221_2961488_-	pfam17854, FtsK_alpha, FtsK alpha domain	NA|140aa|up_8|NZ_CP048621.1_2961694_2962114_-	NA	NA|668aa|up_7|NZ_CP048621.1_2963458_2965462_-	NA	NA|81aa|up_6|NZ_CP048621.1_2965548_2965791_+	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|498aa|up_5|NZ_CP048621.1_2965808_2967302_+	pfam13148, DUF3987, Protein of unknown function (DUF3987)	NA|224aa|up_4|NZ_CP048621.1_2967607_2968279_+	pfam11726, Inovirus_Gp2, Inovirus Gp2	RT|611aa|up_3|NZ_CP048621.1_2968803_2970636_+	cd03487, RT_Bac_retron_II, RT_Bac_retron_II: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons	NA|311aa|up_2|NZ_CP048621.1_2971164_2972097_+	NA	NA|185aa|up_1|NZ_CP048621.1_2972093_2972648_+	NA	NA|414aa|up_0|NZ_CP048621.1_2972834_2974076_-	PRK09692, PRK09692, integrase; Provisional	NA|312aa|down_0|NZ_CP048621.1_2974877_2975813_-	PRK08027, flgL, flagellar hook-filament junction protein FlgL	NA|547aa|down_1|NZ_CP048621.1_2975840_2977481_-	PRK08147, flgK, flagellar hook-associated protein FlgK; Validated	NA|327aa|down_2|NZ_CP048621.1_2977725_2978706_-	PRK05684, flgJ, flagellar assembly peptidoglycan hydrolase FlgJ	NA|368aa|down_3|NZ_CP048621.1_2978705_2979809_-	PRK05303, flgI, flagellar basal body P-ring protein FlgI	NA|244aa|down_4|NZ_CP048621.1_2979850_2980582_-	PRK00249, flgH, flagellar basal body L-ring protein FlgH	NA|261aa|down_5|NZ_CP048621.1_2980707_2981490_-	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional	NA|252aa|down_6|NZ_CP048621.1_2981509_2982265_-	PRK12640, flgF, flagellar basal body rod protein FlgF; Reviewed	NA|407aa|down_7|NZ_CP048621.1_2982280_2983501_-	PRK05682, flgE, flagellar hook protein FlgE; Validated	NA|280aa|down_8|NZ_CP048621.1_2983531_2984371_-	PRK06655, flgD, flagellar hook assembly protein FlgD	NA|135aa|down_9|NZ_CP048621.1_2984383_2984788_-	PRK05681, flgC, flagellar basal body rod protein FlgC; Reviewed
