assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_010730195.1_ASM1073019v1	NZ_AP022613	Mycobacterium conspicuum strain JCM 14738	1	4237-5214	1	CRT	no		cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	Orphan	NNNCCGCCGNCNCCGCCG	18	0	0	NA	NA	NA	14	14	Orphan	cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	NA,NA|170aa|down_6|NZ_AP022613.1_14224_14734_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|390aa|up_1|NZ_AP022613.1_1600_2770_-	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau	NA|98aa|up_0|NZ_AP022613.1_2774_3068_+	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|518aa|down_0|NZ_AP022613.1_7071_8625_-	pfam00934, PE, PE family	NA|433aa|down_1|NZ_AP022613.1_8770_10069_+	pfam02515, CoA_transf_3, CoA-transferase family III	NA|435aa|down_2|NZ_AP022613.1_10062_11367_+	COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]	NA|299aa|down_3|NZ_AP022613.1_11351_12248_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|214aa|down_4|NZ_AP022613.1_12349_12991_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|412aa|down_5|NZ_AP022613.1_12987_14223_+	cd00321, SO_family_Moco, Sulfite oxidase (SO) family, molybdopterin binding domain	NA|170aa|down_6|NZ_AP022613.1_14224_14734_+	NA	NA|395aa|down_7|NZ_AP022613.1_14780_15965_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|470aa|down_8|NZ_AP022613.1_16006_17416_+	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT	NA|261aa|down_9|NZ_AP022613.1_17452_18235_+	PRK08252, PRK08252, crotonase/enoyl-CoA hydratase family protein
GCF_010730195.1_ASM1073019v1	NZ_AP022613	Mycobacterium conspicuum strain JCM 14738	2	70048-70250	1	PILER-CR	no		cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	Orphan	GGCGCTGGCGGCGCCGGCGGCGTCGGCGGA	30	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	NA|52aa|up_0|NZ_AP022613.1_69007_69163_-,NA|277aa|down_3|NZ_AP022613.1_73765_74596_-,NA|100aa|down_4|NZ_AP022613.1_74685_74985_-	NA|380aa|up_9|NZ_AP022613.1_58463_59603_+	pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain	NA|212aa|up_8|NZ_AP022613.1_59639_60275_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|430aa|up_7|NZ_AP022613.1_60284_61574_+	cd01033, ClC_like, Putative ClC chloride channel	NA|281aa|up_6|NZ_AP022613.1_61511_62354_-	pfam01575, MaoC_dehydratas, MaoC like domain	NA|455aa|up_5|NZ_AP022613.1_62358_63723_-	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|437aa|up_4|NZ_AP022613.1_63863_65174_+	PRK09268, PRK09268, acetyl-CoA C-acetyltransferase	NA|612aa|up_3|NZ_AP022613.1_65455_67291_-	cd01153, ACAD_fadE5, Putative acyl-CoA dehydrogenases similar to fadE5	NA|345aa|up_2|NZ_AP022613.1_67491_68526_+	COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only]	NA|163aa|up_1|NZ_AP022613.1_68522_69011_+	smart00903, Flavin_Reduct, Flavin reductase like domain	NA|52aa|up_0|NZ_AP022613.1_69007_69163_-	NA	NA|186aa|down_0|NZ_AP022613.1_70477_71035_+	PTZ00146, PTZ00146, fibrillarin; Provisional	NA|249aa|down_1|NZ_AP022613.1_71031_71778_-	PRK12386, PRK12386, fumarate reductase iron-sulfur subunit; Provisional	NA|643aa|down_2|NZ_AP022613.1_71777_73706_-	PRK07803, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|277aa|down_3|NZ_AP022613.1_73765_74596_-	NA	NA|100aa|down_4|NZ_AP022613.1_74685_74985_-	NA	NA|169aa|down_5|NZ_AP022613.1_75032_75539_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|177aa|down_6|NZ_AP022613.1_75650_76181_+	cd14797, DUF302, Uncharacterized domain family DUF302	NA|151aa|down_7|NZ_AP022613.1_76247_76700_-	cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)	NA|855aa|down_8|NZ_AP022613.1_76926_79491_+	TIGR02374, Nitrite_reductase_NADH_large_subunit, nitrite reductase [NAD(P)H], large subunit	NA|119aa|down_9|NZ_AP022613.1_79487_79844_+	pfam13806, Rieske_2, Rieske-like [2Fe-2S] domain
GCF_010730195.1_ASM1073019v1	NZ_AP022613	Mycobacterium conspicuum strain JCM 14738	3	286425-286531	1	CRISPRCasFinder	no		cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	Orphan	GGCGTTGAGTGTGAACGTATGGCGGGGTTCGGGCCC	36	1	1	286461-286495	NZ_AP022613.1_287965-287999	NA	1	1	Orphan	cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	NA,NA|440aa|down_3|NZ_AP022613.1_291422_292742_-	NA|254aa|up_9|NZ_AP022613.1_275639_276401_+	pfam04072, LCM, Leucine carboxyl methyltransferase	NA|162aa|up_8|NZ_AP022613.1_276458_276944_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|358aa|up_7|NZ_AP022613.1_276940_278014_+	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family	NA|370aa|up_6|NZ_AP022613.1_278010_279120_+	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|441aa|up_5|NZ_AP022613.1_279116_280439_+	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family	NA|252aa|up_4|NZ_AP022613.1_280439_281195_-	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain	NA|336aa|up_3|NZ_AP022613.1_281237_282245_+	TIGR03554, F420_G6P_DH, glucose-6-phosphate dehydrogenase (coenzyme-F420)	NA|697aa|up_2|NZ_AP022613.1_282241_284332_+	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|383aa|up_1|NZ_AP022613.1_284321_285470_+	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|294aa|up_0|NZ_AP022613.1_285541_286423_+	pfam18741, MTES_1575, REase_MTES_1575	NA|383aa|down_0|NZ_AP022613.1_286537_287686_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|775aa|down_1|NZ_AP022613.1_288124_290449_-	pfam16918, PknG_TPR, Protein kinase G tetratricopeptide repeat	NA|326aa|down_2|NZ_AP022613.1_290448_291426_-	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|440aa|down_3|NZ_AP022613.1_291422_292742_-	NA	NA|228aa|down_4|NZ_AP022613.1_292821_293505_+	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|221aa|down_5|NZ_AP022613.1_293476_294139_-	PRK00043, thiE, thiamine phosphate synthase	NA|334aa|down_6|NZ_AP022613.1_294279_295281_+	TIGR02352, Glycine_oxidase, glycine oxidase ThiO	NA|70aa|down_7|NZ_AP022613.1_295280_295490_+	PRK05863, PRK05863, sulfur carrier protein ThiS; Provisional	NA|253aa|down_8|NZ_AP022613.1_295482_296241_+	PRK00208, thiG, thiazole synthase; Reviewed	NA|255aa|down_9|NZ_AP022613.1_296246_297011_+	cd01823, SEST_like, SEST_like
GCF_010730195.1_ASM1073019v1	NZ_AP022613	Mycobacterium conspicuum strain JCM 14738	4	288000-288096	2	CRISPRCasFinder	no		cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	Orphan	GGCGTTGAGTGTGAACGTATGGCG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	NA,NA|440aa|down_2|NZ_AP022613.1_291422_292742_-,NA|193aa|down_9|NZ_AP022613.1_297007_297586_-	NA|162aa|up_9|NZ_AP022613.1_276458_276944_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|358aa|up_8|NZ_AP022613.1_276940_278014_+	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family	NA|370aa|up_7|NZ_AP022613.1_278010_279120_+	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|441aa|up_6|NZ_AP022613.1_279116_280439_+	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family	NA|252aa|up_5|NZ_AP022613.1_280439_281195_-	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain	NA|336aa|up_4|NZ_AP022613.1_281237_282245_+	TIGR03554, F420_G6P_DH, glucose-6-phosphate dehydrogenase (coenzyme-F420)	NA|697aa|up_3|NZ_AP022613.1_282241_284332_+	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|383aa|up_2|NZ_AP022613.1_284321_285470_+	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|294aa|up_1|NZ_AP022613.1_285541_286423_+	pfam18741, MTES_1575, REase_MTES_1575	NA|383aa|up_0|NZ_AP022613.1_286537_287686_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|775aa|down_0|NZ_AP022613.1_288124_290449_-	pfam16918, PknG_TPR, Protein kinase G tetratricopeptide repeat	NA|326aa|down_1|NZ_AP022613.1_290448_291426_-	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|440aa|down_2|NZ_AP022613.1_291422_292742_-	NA	NA|228aa|down_3|NZ_AP022613.1_292821_293505_+	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|221aa|down_4|NZ_AP022613.1_293476_294139_-	PRK00043, thiE, thiamine phosphate synthase	NA|334aa|down_5|NZ_AP022613.1_294279_295281_+	TIGR02352, Glycine_oxidase, glycine oxidase ThiO	NA|70aa|down_6|NZ_AP022613.1_295280_295490_+	PRK05863, PRK05863, sulfur carrier protein ThiS; Provisional	NA|253aa|down_7|NZ_AP022613.1_295482_296241_+	PRK00208, thiG, thiazole synthase; Reviewed	NA|255aa|down_8|NZ_AP022613.1_296246_297011_+	cd01823, SEST_like, SEST_like	NA|193aa|down_9|NZ_AP022613.1_297007_297586_-	NA
GCF_010730195.1_ASM1073019v1	NZ_AP022613	Mycobacterium conspicuum strain JCM 14738	5	323612-323697	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	Orphan	GCTGTTCCGGCGCGCATCGTCGCCGGGCT	29	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	NA|92aa|up_7|NZ_AP022613.1_315055_315331_-,NA|148aa|up_5|NZ_AP022613.1_319921_320365_-,NA|196aa|up_3|NZ_AP022613.1_321374_321962_-,NA|75aa|down_4|NZ_AP022613.1_327115_327340_+,NA|168aa|down_6|NZ_AP022613.1_328800_329304_-,NA|132aa|down_7|NZ_AP022613.1_329300_329696_-	NA|128aa|up_9|NZ_AP022613.1_310786_311170_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|1292aa|up_8|NZ_AP022613.1_311166_315042_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|92aa|up_7|NZ_AP022613.1_315055_315331_-	NA	NA|1510aa|up_6|NZ_AP022613.1_315380_319910_-	cd07539, P-type_ATPase, uncharacterized subfamily of P-type ATPase transporters	NA|148aa|up_5|NZ_AP022613.1_319921_320365_-	NA	NA|269aa|up_4|NZ_AP022613.1_320558_321365_-	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|196aa|up_3|NZ_AP022613.1_321374_321962_-	NA	NA|198aa|up_2|NZ_AP022613.1_321991_322585_-	PRK00150, def, peptide deformylase; Reviewed	NA|103aa|up_1|NZ_AP022613.1_322782_323091_+	pfam11662, DUF3263, Protein of unknown function (DUF3263)	NA|158aa|up_0|NZ_AP022613.1_323122_323596_+	pfam13399, LytR_C, LytR cell envelope-related transcriptional attenuator	NA|236aa|down_0|NZ_AP022613.1_323708_324416_+	COG2032, SodC, Cu/Zn superoxide dismutase [Inorganic ion transport and metabolism]	NA|376aa|down_1|NZ_AP022613.1_324405_325533_+	PRK13517, PRK13517, glutamate--cysteine ligase	NA|214aa|down_2|NZ_AP022613.1_325535_326177_+	COG2802, COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease [General function prediction only]	NA|247aa|down_3|NZ_AP022613.1_326200_326941_-	pfam05711, TylF, Macrocin-O-methyltransferase (TylF)	NA|75aa|down_4|NZ_AP022613.1_327115_327340_+	NA	NA|440aa|down_5|NZ_AP022613.1_327336_328656_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|168aa|down_6|NZ_AP022613.1_328800_329304_-	NA	NA|132aa|down_7|NZ_AP022613.1_329300_329696_-	NA	NA|199aa|down_8|NZ_AP022613.1_329717_330314_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|722aa|down_9|NZ_AP022613.1_330287_332453_-	TIGR01243, Cell_division_cycle_protein_48_homolog_MJ1156, AAA family ATPase, CDC48 subfamily
GCF_010730195.1_ASM1073019v1	NZ_AP022613	Mycobacterium conspicuum strain JCM 14738	6	787524-788377	2	CRT	no		cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	Orphan	CGTNGCCGCCGNNGCCGCCGTTGCCGNC	28	1	4	787709-787734|787709-787734|787709-787734|787709-787734	NZ_AP022613.1_2057288-2057263|NZ_AP022613.1_23151-23176|NZ_AP022613.1_25203-25228|NZ_AP022613.1_1558689-1558714	NA	13	13	Orphan	cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	NA|156aa|up_6|NZ_AP022613.1_778902_779370_-,NA	NA|225aa|up_9|NZ_AP022613.1_775423_776098_+	PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|526aa|up_8|NZ_AP022613.1_776094_777672_+	cd03468, PolY_like, DNA Polymerase Y-family	NA|390aa|up_7|NZ_AP022613.1_777696_778866_-	cd03332, LMO_FMN, L-Lactate 2-monooxygenase (LMO) FMN-binding domain	NA|156aa|up_6|NZ_AP022613.1_778902_779370_-	NA	NA|279aa|up_5|NZ_AP022613.1_779591_780428_+	pfam00823, PPE, PPE family	NA|331aa|up_4|NZ_AP022613.1_780424_781417_-	cd02653, nuc_hydro_3, NH_3: A subgroup of nucleoside hydrolases	NA|667aa|up_3|NZ_AP022613.1_781493_783494_-	PRK07201, PRK07201, SDR family oxidoreductase	NA|240aa|up_2|NZ_AP022613.1_783538_784258_-	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|291aa|up_1|NZ_AP022613.1_784353_785226_+	PLN02864, PLN02864, enoyl-CoA hydratase	NA|465aa|up_0|NZ_AP022613.1_785222_786617_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|369aa|down_0|NZ_AP022613.1_792707_793814_-	TIGR00685, Trehalose-6-phosphate_phosphatase, trehalose-phosphatase	NA|449aa|down_1|NZ_AP022613.1_793935_795282_-	TIGR02946, Putative_diacyglycerol_O-acyltransferase_Mb3115, acyltransferase, WS/DGAT/MGAT	NA|1089aa|down_2|NZ_AP022613.1_795546_798813_+	PRK05672, dnaE2, error-prone DNA polymerase; Validated	NA|357aa|down_3|NZ_AP022613.1_799057_800128_+	PRK06180, PRK06180, short chain dehydrogenase; Provisional	NA|145aa|down_4|NZ_AP022613.1_800133_800568_-	TIGR03667, Rv3369, PPOX class probable F420-dependent enzyme, Rv3369 family	NA|215aa|down_5|NZ_AP022613.1_800566_801211_+	COG0778, NfnB, Nitroreductase [Energy production and conversion]	NA|155aa|down_6|NZ_AP022613.1_801211_801676_-	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis]	NA|878aa|down_7|NZ_AP022613.1_801965_804599_+	cd00075, HATPase, Histidine kinase-like ATPase domain	NA|137aa|down_8|NZ_AP022613.1_804595_805006_+	COG2018, COG2018, Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only]	NA|125aa|down_9|NZ_AP022613.1_805012_805387_+	pfam05331, DUF742, Protein of unknown function (DUF742)
GCF_010730195.1_ASM1073019v1	NZ_AP022613	Mycobacterium conspicuum strain JCM 14738	7	4286890-4287991	3	CRT	no		cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	Orphan	GCCGCCGTNNCCGCCGNNGCCGCCG	25	0	0	NA	NA	NA	12	12	Orphan	cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	NA|1787aa|up_2|NZ_AP022613.1_4273412_4278773_-,NA|124aa|down_0|NZ_AP022613.1_4290597_4290969_-,NA|154aa|down_1|NZ_AP022613.1_4291391_4291853_-,NA|176aa|down_2|NZ_AP022613.1_4291849_4292377_-,NA|251aa|down_4|NZ_AP022613.1_4294205_4294958_+,NA|69aa|down_5|NZ_AP022613.1_4295100_4295307_-,NA|155aa|down_6|NZ_AP022613.1_4295430_4295895_+	NA|196aa|up_9|NZ_AP022613.1_4265058_4265646_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|400aa|up_8|NZ_AP022613.1_4265818_4267018_+	pfam00823, PPE, PPE family	NA|239aa|up_7|NZ_AP022613.1_4267019_4267736_-	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|382aa|up_6|NZ_AP022613.1_4267765_4268911_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|556aa|up_5|NZ_AP022613.1_4268907_4270575_-	PRK11634, PRK11634, ATP-dependent RNA helicase DeaD; Provisional	NA|179aa|up_4|NZ_AP022613.1_4270722_4271259_+	pfam14041, Lipoprotein_21, LppP/LprE lipoprotein	NA|107aa|up_3|NZ_AP022613.1_4272802_4273123_-	pfam00934, PE, PE family	NA|1787aa|up_2|NZ_AP022613.1_4273412_4278773_-	NA	NA|937aa|up_1|NZ_AP022613.1_4279025_4281836_-	pfam00934, PE, PE family	NA|513aa|up_0|NZ_AP022613.1_4281952_4283491_-	pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal	NA|124aa|down_0|NZ_AP022613.1_4290597_4290969_-	NA	NA|154aa|down_1|NZ_AP022613.1_4291391_4291853_-	NA	NA|176aa|down_2|NZ_AP022613.1_4291849_4292377_-	NA	NA|505aa|down_3|NZ_AP022613.1_4292516_4294031_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|251aa|down_4|NZ_AP022613.1_4294205_4294958_+	NA	NA|69aa|down_5|NZ_AP022613.1_4295100_4295307_-	NA	NA|155aa|down_6|NZ_AP022613.1_4295430_4295895_+	NA	NA|1224aa|down_7|NZ_AP022613.1_4296009_4299681_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|409aa|down_8|NZ_AP022613.1_4299776_4301003_-	pfam13847, Methyltransf_31, Methyltransferase domain	NA|407aa|down_9|NZ_AP022613.1_4301118_4302339_-	pfam13649, Methyltransf_25, Methyltransferase domain
GCF_010730195.1_ASM1073019v1	NZ_AP022613	Mycobacterium conspicuum strain JCM 14738	8	4288756-4288999	2	PILER-CR	no		cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	Orphan	GTTGCCGCCGTTGCCGCCGTTGCCGCCGTTACCGGTGCCGCC	42	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	NA|1787aa|up_2|NZ_AP022613.1_4273412_4278773_-,NA|124aa|down_0|NZ_AP022613.1_4290597_4290969_-,NA|154aa|down_1|NZ_AP022613.1_4291391_4291853_-,NA|176aa|down_2|NZ_AP022613.1_4291849_4292377_-,NA|251aa|down_4|NZ_AP022613.1_4294205_4294958_+,NA|69aa|down_5|NZ_AP022613.1_4295100_4295307_-,NA|155aa|down_6|NZ_AP022613.1_4295430_4295895_+	NA|196aa|up_9|NZ_AP022613.1_4265058_4265646_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|400aa|up_8|NZ_AP022613.1_4265818_4267018_+	pfam00823, PPE, PPE family	NA|239aa|up_7|NZ_AP022613.1_4267019_4267736_-	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|382aa|up_6|NZ_AP022613.1_4267765_4268911_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|556aa|up_5|NZ_AP022613.1_4268907_4270575_-	PRK11634, PRK11634, ATP-dependent RNA helicase DeaD; Provisional	NA|179aa|up_4|NZ_AP022613.1_4270722_4271259_+	pfam14041, Lipoprotein_21, LppP/LprE lipoprotein	NA|107aa|up_3|NZ_AP022613.1_4272802_4273123_-	pfam00934, PE, PE family	NA|1787aa|up_2|NZ_AP022613.1_4273412_4278773_-	NA	NA|937aa|up_1|NZ_AP022613.1_4279025_4281836_-	pfam00934, PE, PE family	NA|513aa|up_0|NZ_AP022613.1_4281952_4283491_-	pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal	NA|124aa|down_0|NZ_AP022613.1_4290597_4290969_-	NA	NA|154aa|down_1|NZ_AP022613.1_4291391_4291853_-	NA	NA|176aa|down_2|NZ_AP022613.1_4291849_4292377_-	NA	NA|505aa|down_3|NZ_AP022613.1_4292516_4294031_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|251aa|down_4|NZ_AP022613.1_4294205_4294958_+	NA	NA|69aa|down_5|NZ_AP022613.1_4295100_4295307_-	NA	NA|155aa|down_6|NZ_AP022613.1_4295430_4295895_+	NA	NA|1224aa|down_7|NZ_AP022613.1_4296009_4299681_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|409aa|down_8|NZ_AP022613.1_4299776_4301003_-	pfam13847, Methyltransf_31, Methyltransferase domain	NA|407aa|down_9|NZ_AP022613.1_4301118_4302339_-	pfam13649, Methyltransf_25, Methyltransferase domain
GCF_010730195.1_ASM1073019v1	NZ_AP022613	Mycobacterium conspicuum strain JCM 14738	9	4487939-4488254	4	CRISPRCasFinder	no		cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	Orphan	CGATCCCGGGCCTGACCCCGCCGGC	25	0	0	NA	NA	NA	4	4	Orphan	cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	NA,NA|49aa|down_1|NZ_AP022613.1_4489456_4489603_-	NA|417aa|up_9|NZ_AP022613.1_4476955_4478206_-	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|395aa|up_8|NZ_AP022613.1_4478202_4479387_-	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|364aa|up_7|NZ_AP022613.1_4479383_4480475_-	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|339aa|up_6|NZ_AP022613.1_4480486_4481503_-	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|352aa|up_5|NZ_AP022613.1_4481495_4482551_-	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|524aa|up_4|NZ_AP022613.1_4482547_4484119_-	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|273aa|up_3|NZ_AP022613.1_4484123_4484942_-	pfam02405, MlaE, Permease MlaE	NA|287aa|up_2|NZ_AP022613.1_4484938_4485799_-	pfam02405, MlaE, Permease MlaE	NA|95aa|up_1|NZ_AP022613.1_4486092_4486377_+	PRK00823, phhB, pterin-4-alpha-carbinolamine dehydratase; Validated	NA|405aa|up_0|NZ_AP022613.1_4486321_4487536_-	PRK13375, pimE, mannosyltransferase; Provisional	NA|337aa|down_0|NZ_AP022613.1_4488442_4489453_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|49aa|down_1|NZ_AP022613.1_4489456_4489603_-	NA	NA|195aa|down_2|NZ_AP022613.1_4489599_4490184_-	TIGR03252, TIGR03252, uncharacterized HhH-GPD family protein	NA|424aa|down_3|NZ_AP022613.1_4490384_4491656_+	pfam02720, DUF222, Domain of unknown function (DUF222)	NA|167aa|down_4|NZ_AP022613.1_4491917_4492418_+	pfam13577, SnoaL_4, SnoaL-like domain	NA|66aa|down_5|NZ_AP022613.1_4492414_4492612_-	pfam17227, DUF5302, Family of unknown function (DUF5302)	NA|148aa|down_6|NZ_AP022613.1_4492621_4493065_-	TIGR03618, Rv1155_F420, PPOX class probable F420-dependent enzyme	NA|174aa|down_7|NZ_AP022613.1_4493099_4493621_+	COG3797, COG3797, Uncharacterized protein conserved in bacteria [Function unknown]	NA|122aa|down_8|NZ_AP022613.1_4494449_4494815_-	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|239aa|down_9|NZ_AP022613.1_4494852_4495569_+	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional
GCF_010730195.1_ASM1073019v1	NZ_AP022613	Mycobacterium conspicuum strain JCM 14738	10	5383746-5384021	4	CRT	no	cas3	cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	Unclear	GGNNCCGGCGGCNANGGNGGC	21	1	1	5383881-5383901	NZ_AP022613.1_2794479-2794499	NA	5	5	Unclear	cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	NA|574aa|up_0|NZ_AP022613.1_5380741_5382463_+,NA|200aa|down_3|NZ_AP022613.1_5390200_5390800_-,NA|529aa|down_7|NZ_AP022613.1_5394880_5396467_+	NA|204aa|up_9|NZ_AP022613.1_5372805_5373417_-	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|320aa|up_8|NZ_AP022613.1_5373444_5374404_-	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]	NA|352aa|up_7|NZ_AP022613.1_5374382_5375438_-	TIGR03883, DUF2342_F420, uncharacterized protein, coenzyme F420 biosynthesis associated	NA|462aa|up_6|NZ_AP022613.1_5375434_5376820_-	TIGR00666, D-alanyl-D-alanine_carboxypeptidase_DacB, D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family	NA|163aa|up_5|NZ_AP022613.1_5376928_5377417_+	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase	NA|413aa|up_4|NZ_AP022613.1_5377413_5378652_+	COG2244, RfbX, Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]	NA|233aa|up_3|NZ_AP022613.1_5378665_5379364_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|112aa|up_2|NZ_AP022613.1_5379363_5379699_+	pfam10066, DUF2304, Uncharacterized conserved protein (DUF2304)	NA|316aa|up_1|NZ_AP022613.1_5379735_5380683_-	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|574aa|up_0|NZ_AP022613.1_5380741_5382463_+	NA	NA|406aa|down_0|NZ_AP022613.1_5384208_5385426_-	PRK07940, PRK07940, DNA polymerase III subunit delta'; Validated	NA|539aa|down_1|NZ_AP022613.1_5385581_5387198_+	cd07302, CHD, cyclase homology domain	NA|927aa|down_2|NZ_AP022613.1_5387205_5389986_-	PRK07561, PRK07561, DNA topoisomerase I subunit omega; Validated	NA|200aa|down_3|NZ_AP022613.1_5390200_5390800_-	NA	NA|68aa|down_4|NZ_AP022613.1_5390979_5391183_-	COG1278, CspC, Cold shock proteins [Transcription]	cas3|772aa|down_5|NZ_AP022613.1_5391497_5393813_+	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|251aa|down_6|NZ_AP022613.1_5393936_5394689_+	pfam00934, PE, PE family	NA|529aa|down_7|NZ_AP022613.1_5394880_5396467_+	NA	NA|346aa|down_8|NZ_AP022613.1_5396955_5397993_+	pfam18621, DUF5628, Family of unknown function (DUF5628)	NA|103aa|down_9|NZ_AP022613.1_5397997_5398306_-	TIGR03816, tadE_like_DECH, helicase/secretion neighborhood TadE-like protein
GCF_010730195.1_ASM1073019v1	NZ_AP022613	Mycobacterium conspicuum strain JCM 14738	11	6230943-6234643	5,3	CRT,PILER-CR	no		cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	Orphan	GCCGCCGNTGCCGCCGTTGCCGCCG,GCCGTTGCCGCCGTTGCCGCCGGTACCGCCGTTGCCG	25,37	0	0	NA	NA	NA:NA	41,2	41	Orphan	cas3,csa3,PD-DExK,PrimPol,WYL,cas4,DEDDh,DinG	NA|293aa|up_8|NZ_AP022613.1_6220906_6221785_+,NA|520aa|up_7|NZ_AP022613.1_6221727_6223287_+,NA|96aa|up_5|NZ_AP022613.1_6225400_6225688_+,NA	NA|250aa|up_9|NZ_AP022613.1_6220029_6220779_-	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|293aa|up_8|NZ_AP022613.1_6220906_6221785_+	NA	NA|520aa|up_7|NZ_AP022613.1_6221727_6223287_+	NA	NA|609aa|up_6|NZ_AP022613.1_6223431_6225258_+	PRK04210, PRK04210, phosphoenolpyruvate carboxykinase (GTP)	NA|96aa|up_5|NZ_AP022613.1_6225400_6225688_+	NA	NA|507aa|up_4|NZ_AP022613.1_6225779_6227300_+	PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated	NA|300aa|up_3|NZ_AP022613.1_6227296_6228196_+	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|144aa|up_2|NZ_AP022613.1_6228227_6228659_-	pfam04505, CD225, Interferon-induced transmembrane protein	NA|389aa|up_1|NZ_AP022613.1_6228725_6229892_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|329aa|up_0|NZ_AP022613.1_6229901_6230888_+	cd03451, FkbR2, FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
