The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	0	33360	5120341		Planktothrix_phage(100.0%)	34	NA	NA
WP_165227636.1|585_1677_-	fumarylacetoacetase	NA	NA	NA	NA	NA
WP_165227639.1|1669_2428_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165227641.1|2424_3099_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_165227643.1|3165_4350_+	homogentisate 1,2-dioxygenase	NA	NA	NA	NA	NA
WP_165238444.1|4405_4822_-	RDD family protein	NA	NA	NA	NA	NA
WP_165238446.1|5270_6170_+	pirin family protein	NA	NA	NA	NA	NA
WP_165227645.1|6169_6748_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_165227647.1|6737_7445_-	isoprenylcysteine carboxylmethyltransferase family protein	NA	NA	NA	NA	NA
WP_165227649.1|7488_8565_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_165238448.1|8470_8896_-	heme-binding protein	NA	NA	NA	NA	NA
WP_165227651.1|8898_11040_-	malate synthase G	NA	NA	NA	NA	NA
WP_165227653.1|11062_12424_+	FAD-binding protein	NA	NA	NA	NA	NA
WP_165227655.1|12446_13139_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165227657.1|13176_14586_+	amidase	NA	NA	NA	NA	NA
WP_165227659.1|14867_15038_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_165227661.1|15226_16213_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165227663.1|16233_16632_+	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_165227665.1|16631_16988_+	acyl dehydratase	NA	NA	NA	NA	NA
WP_165227667.1|16980_18000_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
WP_165227669.1|18009_18438_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165227671.1|18434_19478_-	adenosine deaminase	NA	NA	NA	NA	NA
WP_165227673.1|19470_20763_-	aminotransferase	NA	NA	NA	NA	NA
WP_165227675.1|21014_21278_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_165238450.1|21566_22352_+	transcription termination/antitermination protein NusG	NA	NA	NA	NA	NA
WP_165227677.1|22447_22882_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_165227679.1|22883_23606_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_165227681.1|23990_24656_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_165227683.1|24739_25135_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_165227685.1|25237_28576_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_165227687.1|28563_28899_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_165227689.1|28895_29612_-	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_165227691.1|29608_30085_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165227693.1|30225_32142_+	Ig-like domain repeat protein	NA	NA	NA	NA	NA
WP_165227695.1|32403_33360_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.5	1.3e-23
>prophage 2
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	44033	51536	5120341		Emiliania_huxleyi_virus(50.0%)	2	NA	NA
WP_165227717.1|44033_47534_+	DNA-directed RNA polymerase subunit beta	NA	G8DH04	Emiliania_huxleyi_virus	21.1	8.2e-31
WP_165227719.1|47645_51536_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	27.5	6.2e-56
>prophage 3
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	68919	71184	5120341		Acanthamoeba_polyphaga_mimivirus(50.0%)	3	NA	NA
WP_165227751.1|68919_69930_+	DNA topoisomerase IB	NA	A0A0G2Y4T8	Acanthamoeba_polyphaga_mimivirus	27.6	1.3e-26
WP_165227753.1|69979_70672_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165227755.1|70677_71184_+	RNase III inhibitor	NA	A0A140G0J9	Infectious_spleen_and_kidney_necrosis_virus	50.4	2.6e-23
>prophage 4
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	80844	87030	5120341		Bacillus_phage(66.67%)	5	NA	NA
WP_165227781.1|80844_82578_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.9	5.6e-41
WP_165227783.1|82574_84479_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	31.3	6.0e-52
WP_165227785.1|84483_85557_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_165227787.1|85553_86189_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_165227789.1|86238_87030_+	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	29.0	4.1e-15
>prophage 5
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	94660	98238	5120341		Kaumoebavirus(50.0%)	5	NA	NA
WP_165238462.1|94660_95989_-	deoxyribodipyrimidine photo-lyase	NA	A0A1V0CPD8	Kaumoebavirus	30.5	3.2e-44
WP_165227801.1|96040_96727_+	metal-dependent transcriptional regulator	NA	NA	NA	NA	NA
WP_165227803.1|96862_97045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165227805.1|97214_97373_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165227807.1|97380_98238_-	NAD-dependent deacetylase	NA	A0A068EPD4	Bacillus_phage	24.6	2.4e-08
>prophage 6
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	135257	142061	5120341		Streptococcus_phage(33.33%)	7	NA	NA
WP_165227878.1|135257_136082_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	37.9	1.2e-38
WP_165227880.1|136078_136912_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_165227882.1|136908_137745_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_165227884.1|137830_138487_+	resuscitation-promoting factor	NA	A0A2I6B0Z0	Macacine_betaherpesvirus	61.8	1.9e-18
WP_165238468.1|138509_139388_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_165238470.1|139396_140287_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_165227886.1|140279_142061_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	25.9	3.4e-41
>prophage 7
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	159180	159822	5120341		Mycobacterium_phage(100.0%)	1	NA	NA
WP_165227929.1|159180_159822_-	VWA domain-containing protein	NA	B5LJH9	Mycobacterium_phage	47.7	4.9e-43
>prophage 8
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	167644	169561	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165238481.1|167644_169561_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	29.6	4.1e-53
>prophage 9
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	173308	174076	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165227948.1|173308_174076_-	transcriptional repressor LexA	NA	A0A1B1P7Q3	Bacillus_phage	47.7	6.6e-10
>prophage 10
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	182062	185008	5120341		Bradyrhizobium_phage(100.0%)	1	NA	NA
WP_165227969.1|182062_185008_+	vitamin B12-dependent ribonucleotide reductase	NA	A0A1X9SGV9	Bradyrhizobium_phage	35.5	6.2e-165
>prophage 11
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	200090	200756	5120341		Mycobacterium_phage(100.0%)	1	NA	NA
WP_165228003.1|200090_200756_+	M48 family peptidase	NA	H9NCM0	Mycobacterium_phage	46.8	1.8e-27
>prophage 12
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	212908	214081	5120341		Enterobacteria_phage(100.0%)	1	NA	NA
WP_165228021.1|212908_214081_+	site-specific DNA-methyltransferase	NA	Q1MVP0	Enterobacteria_phage	33.0	6.7e-46
>prophage 13
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	220665	221427	5120341		Planktothrix_phage(100.0%)	1	NA	NA
WP_165238489.1|220665_221427_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.3	7.9e-32
>prophage 14
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	229107	230813	5120341		Planktothrix_phage(100.0%)	2	NA	NA
WP_165238491.1|229107_229809_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.5	2.5e-32
WP_165228041.1|229874_230813_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.6	1.7e-23
>prophage 15
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	238901	245460	5120341		Bacillus_phage(75.0%)	6	NA	NA
WP_165228057.1|238901_240275_-	HAMP domain-containing histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	28.4	1.1e-07
WP_165228059.1|240271_241000_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.0	3.1e-33
WP_165228061.1|241141_241654_+	SigE family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_165228063.1|241650_243192_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165228065.1|243103_244786_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	30.3	2.9e-26
WP_165238497.1|244782_245460_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.6	2.5e-29
>prophage 16
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	249878	253637	5120341		Catovirus(100.0%)	1	NA	NA
WP_165228075.1|249878_253637_+	ATP-dependent RNA helicase HrpA	NA	A0A1V0SBU4	Catovirus	31.8	1.0e-55
>prophage 17
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	262723	263626	5120341		Lactobacillus_phage(100.0%)	1	NA	NA
WP_165228093.1|262723_263626_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	28.1	9.5e-08
>prophage 18
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	281946	283590	5120341		Acidianus_filamentous_virus(100.0%)	1	NA	NA
WP_165228125.1|281946_283590_-	DEAD/DEAH box helicase	NA	B2CRJ8	Acidianus_filamentous_virus	21.4	2.3e-15
>prophage 19
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	295658	297284	5120341		Staphylococcus_phage(100.0%)	1	NA	NA
WP_165228153.1|295658_297284_+	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	23.8	6.0e-29
>prophage 20
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	304556	304952	5120341		Lactococcus_phage(100.0%)	1	NA	NA
WP_165228161.1|304556_304952_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	39.7	1.2e-07
>prophage 21
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	313369	319109	5120341		Streptococcus_phage(33.33%)	5	NA	NA
WP_165228175.1|313369_315481_+	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	27.1	6.8e-65
WP_165228177.1|315548_316742_+	elongation factor Tu	NA	M4M9V7	Vibrio_phage	63.9	3.1e-06
WP_165238511.1|317062_317830_+	DUF4573 domain-containing protein	NA	NA	NA	NA	NA
WP_165228179.1|317874_318426_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165228181.1|318422_319109_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.3	1.6e-28
>prophage 22
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	323565	324357	5120341		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_165228191.1|323565_324357_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	27.0	1.9e-07
>prophage 23
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	335476	342273	5120341		Micromonas_pusilla_virus(33.33%)	5	NA	NA
WP_165228215.1|335476_337372_+	molecular chaperone DnaK	NA	M4R062	Micromonas_pusilla_virus	47.4	4.9e-147
WP_165228217.1|337419_337896_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_165228219.1|337895_338879_+	DnaJ domain-containing protein	NA	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	31.6	3.7e-13
WP_165228221.1|338875_339196_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165228223.1|341820_342273_+	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	39.5	7.6e-14
>prophage 24
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	362843	363764	5120341		Eastern_grey_kangaroopox_virus(100.0%)	1	NA	NA
WP_165228261.1|362843_363764_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A2C9DTC1	Eastern_grey_kangaroopox_virus	27.7	4.1e-06
>prophage 25
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	372048	374618	5120341		Acanthocystis_turfacea_Chlorella_virus(50.0%)	2	NA	NA
WP_165228279.1|372048_372831_-	serine/threonine protein kinase	NA	M1IB61	Acanthocystis_turfacea_Chlorella_virus	23.9	6.3e-08
WP_165228281.1|372827_374618_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.9	5.8e-49
>prophage 26
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	409005	413260	5120341		Mycobacterium_phage(50.0%)	3	NA	NA
WP_165228369.1|409005_410607_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	36.8	2.0e-56
WP_165228371.1|411610_412081_+	winged helix DNA-binding protein	NA	NA	NA	NA	NA
WP_165228373.1|412267_413260_+	TerC family protein	NA	K4F9T9	Cronobacter_phage	34.3	9.4e-33
>prophage 27
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	422445	424149	5120341		Klosneuvirus(100.0%)	1	NA	NA
WP_165228396.1|422445_424149_-	FAD-dependent oxidoreductase	NA	A0A1V0SIN1	Klosneuvirus	26.7	1.7e-18
>prophage 28
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	434465	435821	5120341		Mycobacterium_phage(100.0%)	1	NA	NA
WP_165228420.1|434465_435821_+	hypothetical protein	NA	A0A249XSS8	Mycobacterium_phage	34.4	2.1e-06
>prophage 29
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	447868	454309	5120341		Tupanvirus(33.33%)	5	NA	NA
WP_165228440.1|447868_449563_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	23.6	2.8e-21
WP_165228442.1|449559_450579_+	PE-PGRS family protein	NA	NA	NA	NA	NA
WP_165228444.1|450744_452076_-	PDZ domain-containing protein	NA	A0A1B1IRD3	uncultured_Mediterranean_phage	34.9	5.7e-09
WP_165228446.1|452157_452658_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165228448.1|452695_454309_+	long-chain-fatty-acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	27.6	2.1e-34
>prophage 30
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	483220	489331	5120341		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
WP_165228486.1|483220_484201_-	type I pantothenate kinase	NA	A0A1B1ISL9	uncultured_Mediterranean_phage	31.0	5.1e-31
WP_165228488.1|484290_486162_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A0A1J0F994	Only_Syngen_Nebraska_virus	37.1	4.7e-94
WP_165228490.1|486183_486534_+	holo-ACP synthase	NA	NA	NA	NA	NA
WP_165228492.1|486556_486859_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165238547.1|486911_488231_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_165228494.1|488227_489331_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	32.1	8.2e-38
>prophage 31
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	493504	501313	5120341	tRNA	uncultured_virus(50.0%)	8	NA	NA
WP_165228500.1|493504_494548_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	41.6	5.0e-61
WP_165228501.1|494555_495461_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165228502.1|495523_496630_+	S-(hydroxymethyl)mycothiol dehydrogenase	NA	A0A0K0KVL7	Prochlorococcus_phage	28.3	7.5e-31
WP_165228503.1|496626_497247_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_165228504.1|497251_497581_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165228505.1|497979_499149_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_165228507.1|499307_499601_+	co-chaperone GroES	NA	A0A221S4M3	uncultured_virus	50.0	1.1e-21
WP_165228509.1|499693_501313_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	58.0	7.3e-160
>prophage 32
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	504382	505882	5120341		Klosneuvirus(100.0%)	1	NA	NA
WP_165228517.1|504382_505882_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.0	4.2e-93
>prophage 33
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	535738	536800	5120341		Synechococcus_phage(100.0%)	1	NA	NA
WP_165228571.1|535738_536800_-	phenylacetate-CoA oxygenase/reductase subunit PaaK	NA	C7BUZ5	Synechococcus_phage	40.3	7.0e-10
>prophage 34
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	562942	564477	5120341		Planktothrix_phage(50.0%)	2	NA	NA
WP_165228614.1|562942_563818_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	28.6	1.7e-14
WP_165228616.1|563814_564477_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	30.6	6.3e-09
>prophage 35
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	579555	585209	5120341		Indivirus(50.0%)	4	NA	NA
WP_165228649.1|579555_580332_-	sugar ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	23.1	1.3e-08
WP_165228651.1|580455_581559_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_165228653.1|581709_582717_+	galactose mutarotase	NA	NA	NA	NA	NA
WP_165228655.1|582701_585209_-	bifunctional FO biosynthesis protein CofGH	NA	A9ZMK9	Mamastrovirus	35.6	6.7e-19
>prophage 36
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	596521	607071	5120341		Bacillus_phage(20.0%)	9	NA	NA
WP_165228679.1|596521_596974_+	CAP domain-containing protein	NA	A0A0E3JT82	Bacillus_phage	33.3	8.1e-08
WP_165228681.1|597050_597845_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165228683.1|597907_599026_+	peptide chain release factor 2	NA	NA	NA	NA	NA
WP_165228685.1|599030_600770_-	fibronectin type III domain-containing protein	NA	F5B3R2	Synechococcus_phage	34.4	2.4e-39
WP_165228687.1|600795_601446_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165228689.1|603482_604172_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	39.0	1.5e-29
WP_165228691.1|604171_605083_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_165228693.1|605176_606445_+	peptidoglycan DD-metalloendopeptidase family protein	NA	V5R8R0	Arthrobacter_phage	36.1	5.8e-11
WP_165228695.1|606594_607071_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.1	2.6e-33
>prophage 37
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	621795	622896	5120341		Bacillus_virus(100.0%)	1	NA	NA
WP_165228719.1|621795_622896_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.8	2.9e-27
>prophage 38
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	634679	636730	5120341		Microbacterium_phage(50.0%)	2	NA	NA
WP_165238579.1|634679_634955_+	DUF3039 domain-containing protein	NA	A0A2R4A1S7	Microbacterium_phage	46.1	7.1e-15
WP_165228748.1|634951_636730_+	DEAD/DEAH box helicase	NA	I4AZM6	Saccharomonospora_phage	36.0	1.7e-80
>prophage 39
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	647942	648500	5120341		Klosneuvirus(100.0%)	1	NA	NA
WP_165228768.1|647942_648500_-	nicotinamidase	NA	A0A1V0SL12	Klosneuvirus	24.3	5.8e-08
>prophage 40
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	652067	663402	5120341		Mycobacterium_phage(20.0%)	12	NA	NA
WP_165228778.1|652067_653270_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	32.6	8.4e-36
WP_165228780.1|653263_653707_+	M67 family metallopeptidase	NA	NA	NA	NA	NA
WP_165228782.1|653706_653979_+	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_165228784.1|653981_654533_+	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_165228786.1|654529_655480_+	pyridoxal-phosphate dependent enzyme	NA	A0A1X9I5F1	Streptococcus_phage	39.5	1.3e-55
WP_165228788.1|655554_656550_+	DUF3152 domain-containing protein	NA	NA	NA	NA	NA
WP_165238587.1|656567_657545_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L8D8	Tupanvirus	33.3	1.5e-30
WP_165228790.1|658108_658816_-	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_165228792.1|658938_659754_+	glutamate racemase	NA	NA	NA	NA	NA
WP_165228794.1|659750_660512_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_165228796.1|660514_661168_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.5	2.5e-10
WP_165228798.1|662457_663402_+	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.0e-28
>prophage 41
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	667801	668404	5120341		Cassava_brown_streak_virus(100.0%)	1	NA	NA
WP_165228810.1|667801_668404_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	A0A1K0ISQ7	Cassava_brown_streak_virus	34.8	5.0e-13
>prophage 42
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	671869	672625	5120341		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_165228827.1|671869_672625_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.4	1.4e-12
>prophage 43
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	675742	678022	5120341		Tupanvirus(100.0%)	1	NA	NA
WP_165228835.1|675742_678022_-	catalase	NA	A0A2K9L0T1	Tupanvirus	44.8	4.8e-125
>prophage 44
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	683608	684652	5120341		Bacillus_virus(100.0%)	1	NA	NA
WP_165228847.1|683608_684652_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.5	2.3e-13
>prophage 45
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	697920	699954	5120341		Planktothrix_phage(100.0%)	1	NA	NA
WP_165228871.1|697920_699954_+	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.7	3.3e-24
>prophage 46
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	714289	716265	5120341		Bacillus_virus(100.0%)	2	NA	NA
WP_165228893.1|714289_715294_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.2	8.1e-08
WP_165238605.1|715305_716265_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.8	4.2e-14
>prophage 47
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	726419	727163	5120341		Planktothrix_phage(100.0%)	1	NA	NA
WP_165238607.1|726419_727163_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.5	2.8e-29
>prophage 48
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	754020	755082	5120341		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_165228957.1|754020_755082_+	restriction endonuclease	NA	A0A1B1IUE7	uncultured_Mediterranean_phage	32.7	5.3e-50
>prophage 49
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	761713	763444	5120341		Lactobacillus_phage(100.0%)	1	NA	NA
WP_165228969.1|761713_763444_+	FAD-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	25.3	2.2e-21
>prophage 50
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	781383	788253	5120341	integrase	Bacillus_phage(20.0%)	10	780486:780502	795614:795630
780486:780502	attL	GCTCGCCGGTGGGCCCG	NA	NA	NA	NA
WP_165228995.1|781383_782118_+	sigma-70 family RNA polymerase sigma factor	NA	A0A0Y0ATF9	Bacillus_phage	28.5	1.2e-08
WP_165228997.1|782506_783523_+|integrase	site-specific integrase	integrase	A0A2H4JCB7	uncultured_Caudovirales_phage	34.3	4.9e-45
WP_165228999.1|783519_783825_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165229001.1|783908_784967_+	DUF932 domain-containing protein	NA	G9FHC5	Rhodococcus_phage	49.2	2.3e-85
WP_165229003.1|785024_785450_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165229005.1|785552_785774_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_165229007.1|785899_786154_+	hypothetical protein	NA	G3MAY5	Bacillus_virus	51.1	7.2e-06
WP_165229009.1|786165_786870_-	thermonuclease family protein	NA	NA	NA	NA	NA
WP_165229011.1|787147_787999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165229013.1|787995_788253_-	helix-turn-helix domain-containing protein	NA	A0A142K9K9	Gordonia_phage	52.7	1.3e-07
795614:795630	attR	CGGGCCCACCGGCGAGC	NA	NA	NA	NA
>prophage 51
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	795347	797022	5120341		Dickeya_phage(50.0%)	2	NA	NA
WP_165238625.1|795347_796175_+	hypothetical protein	NA	A0A140XBC7	Dickeya_phage	41.9	4.0e-05
WP_165229025.1|796356_797022_-	oligoribonuclease	NA	A0A1B3B0T8	Gordonia_phage	30.0	1.2e-15
>prophage 52
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	800199	801021	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165229035.1|800199_801021_-	sigma-70 family RNA polymerase sigma factor	NA	A0A0A0RV91	Bacillus_phage	30.3	1.5e-15
>prophage 53
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	817377	818802	5120341		Synechococcus_phage(100.0%)	1	NA	NA
WP_165229071.1|817377_818802_-	glucose-6-phosphate dehydrogenase	NA	A0A222YYZ2	Synechococcus_phage	37.0	3.3e-71
>prophage 54
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	828481	829966	5120341		Bacillus_virus(100.0%)	1	NA	NA
WP_165238632.1|828481_829966_+	sugar ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.1	7.2e-13
>prophage 55
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	848312	851633	5120341		Bacillus_virus(50.0%)	4	NA	NA
WP_165229113.1|848312_849176_+	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.7	1.4e-13
WP_165229115.1|849215_849959_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_165229117.1|849955_850351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165229119.1|850301_851633_-	M1 family metallopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	23.7	1.4e-20
>prophage 56
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	871127	873397	5120341		Streptomyces_phage(50.0%)	2	NA	NA
WP_165229143.1|871127_871601_-	single-stranded DNA-binding protein	NA	A0A1J0MC89	Streptomyces_phage	42.7	8.4e-16
WP_165229145.1|871714_873397_+	energy-dependent translational throttle protein EttA	NA	A0A2K9L0W2	Tupanvirus	28.2	1.7e-47
>prophage 57
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	881632	888558	5120341	tRNA	Acinetobacter_phage(50.0%)	5	NA	NA
WP_165229165.1|881632_884176_-	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	29.0	2.8e-41
WP_165229167.1|884239_885385_+	chromate efflux transporter	NA	NA	NA	NA	NA
WP_165229169.1|885393_886002_+	DsbA family protein	NA	NA	NA	NA	NA
WP_165229171.1|886005_886692_-	GPP34 family phosphoprotein	NA	NA	NA	NA	NA
WP_165229173.1|886746_888558_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	29.1	3.9e-61
>prophage 58
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	901969	902830	5120341		Bacillus_virus(100.0%)	1	NA	NA
WP_165229209.1|901969_902830_+	Fpg/Nei family DNA glycosylase	NA	G3MA33	Bacillus_virus	27.5	2.2e-09
>prophage 59
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	906904	908593	5120341		Pacmanvirus(100.0%)	1	NA	NA
WP_165229213.1|906904_908593_+	serine/threonine protein kinase	NA	A0A1X6WF11	Pacmanvirus	30.5	1.5e-09
>prophage 60
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	915519	922027	5120341		Bacillus_phage(50.0%)	3	NA	NA
WP_165229221.1|915519_919836_-	FHA domain-containing protein	NA	A0A142F150	Bacillus_phage	35.2	4.7e-20
WP_165229223.1|919899_920163_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165229225.1|920239_922027_-	hypothetical protein	NA	A0A0S0N5R0	Pseudomonas_phage	43.1	9.0e-18
>prophage 61
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	925265	933443	5120341	protease,tRNA	Agrobacterium_phage(50.0%)	8	NA	NA
WP_165238656.1|925265_925853_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	52.6	3.8e-42
WP_165238658.1|925889_926504_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	42.6	1.6e-35
WP_165229233.1|926634_927918_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	60.6	3.1e-145
WP_165229235.1|927976_928882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165229237.1|928878_929403_-	SigE family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_165229239.1|929483_929894_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165229241.1|929956_930805_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_165229243.1|930821_933443_-|tRNA	valine--tRNA ligase	tRNA	A0A2K9KZB8	Tupanvirus	39.4	2.2e-166
>prophage 62
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	945247	945658	5120341		Anguillid_herpesvirus(100.0%)	1	NA	NA
WP_165229267.1|945247_945658_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	52.3	1.6e-31
>prophage 63
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	971025	974962	5120341		Streptococcus_phage(50.0%)	4	NA	NA
WP_165238670.1|971025_972153_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	2.6e-55
WP_165229311.1|972152_973115_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_165229314.1|973107_973719_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165229317.1|973771_974962_+	cysteine desulfurase	NA	A0A1X6WFP1	Pacmanvirus	26.4	4.3e-32
>prophage 64
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	979901	981497	5120341		Mycobacterium_phage(100.0%)	1	NA	NA
WP_165229338.1|979901_981497_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	38.8	7.4e-56
>prophage 65
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	992519	993497	5120341		Bacillus_phage(50.0%)	2	NA	NA
WP_165229360.1|992519_992795_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	58.4	6.2e-19
WP_165238672.1|992879_993497_-	biliverdin-producing heme oxygenase	NA	Q58M64	Prochlorococcus_phage	38.9	1.8e-26
>prophage 66
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1002697	1005975	5120341		Indivirus(50.0%)	3	NA	NA
WP_165238676.1|1002697_1004248_+	ATP-binding cassette domain-containing protein	NA	A0A1V0SE00	Indivirus	23.2	4.1e-11
WP_165238674.1|1004319_1005057_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_165229382.1|1005060_1005975_-	alpha/beta hydrolase	NA	A0A0B5A484	Mycobacterium_phage	23.7	9.9e-05
>prophage 67
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1023961	1025704	5120341		Ostreococcus_lucimarinus_virus(100.0%)	1	NA	NA
WP_165229428.1|1023961_1025704_+	acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	31.7	1.6e-56
>prophage 68
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1030082	1030982	5120341		Staphylococcus_phage(100.0%)	1	NA	NA
WP_165229443.1|1030082_1030982_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	37.9	2.6e-29
>prophage 69
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1035285	1039088	5120341		Microbacterium_phage(33.33%)	3	NA	NA
WP_165229458.1|1035285_1035750_+	cytoplasmic protein	NA	A0A2R4A1Q4	Microbacterium_phage	44.7	4.1e-23
WP_165229461.1|1035746_1037318_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	24.0	7.4e-24
WP_165238682.1|1037498_1039088_+	phosphoglycerate dehydrogenase	NA	A0A2R8FCS0	Cedratvirus	35.1	9.7e-32
>prophage 70
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1046949	1050455	5120341		Tokyovirus(50.0%)	2	NA	NA
WP_165229492.1|1046949_1048737_+	serine/threonine protein kinase	NA	A0A146JFA3	Tokyovirus	27.2	5.6e-12
WP_165229495.1|1048874_1050455_+	citramalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	39.2	4.8e-07
>prophage 71
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1078041	1078455	5120341		Bandra_megavirus(100.0%)	1	NA	NA
WP_165238688.1|1078041_1078455_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A2K9V7K0	Bandra_megavirus	44.9	1.2e-13
>prophage 72
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1082815	1084521	5120341		Mycobacterium_phage(50.0%)	2	NA	NA
WP_165229588.1|1082815_1083637_+	alpha/beta hydrolase	NA	A0A0B5A484	Mycobacterium_phage	26.2	4.3e-07
WP_165229591.1|1083762_1084521_+	HU family DNA-binding protein	NA	A0A2P1N0A2	Streptomyces_phage	53.1	5.3e-20
>prophage 73
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1098399	1101380	5120341		uncultured_Mediterranean_phage(33.33%)	5	NA	NA
WP_165229631.1|1098399_1098882_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	35.6	7.5e-20
WP_165238690.1|1098988_1099531_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_165229635.1|1099544_1099730_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_165238692.1|1099684_1100488_+	ribonuclease III	NA	A0A2K9R4Y7	Dishui_lake_phycodnavirus	36.0	4.9e-24
WP_165229638.1|1100492_1101380_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	F8WPX6	Bacillus_phage	27.6	6.9e-19
>prophage 74
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1110705	1111833	5120341		uncultured_phage(100.0%)	1	NA	NA
WP_165229663.1|1110705_1111833_+	signal recognition particle-docking protein FtsY	NA	D6PHS7	uncultured_phage	38.6	9.1e-16
>prophage 75
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1116312	1117617	5120341		Ostreococcus_tauri_virus(100.0%)	1	NA	NA
WP_165238696.1|1116312_1117617_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	30.2	1.8e-28
>prophage 76
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1135439	1136126	5120341		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_165229728.1|1135439_1136126_+	ribonuclease HII	NA	D2TEQ2	Emiliania_huxleyi_virus	34.3	6.3e-20
>prophage 77
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1139887	1140868	5120341		Mycobacterium_phage(100.0%)	1	NA	NA
WP_165229740.1|1139887_1140868_-	tyrosine recombinase XerC	NA	A0A2H4PCY2	Mycobacterium_phage	31.9	1.3e-13
>prophage 78
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1157520	1163057	5120341		Acinetobacter_phage(50.0%)	4	NA	NA
WP_165229790.1|1157520_1158948_+	M1 family metallopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	27.7	1.5e-20
WP_165238702.1|1159736_1161044_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_165229793.1|1161040_1161514_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_165229796.1|1161824_1163057_+	hydroxyacid dehydrogenase	NA	A0A1V0SBV6	Catovirus	29.1	6.2e-34
>prophage 79
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1168205	1169207	5120341		Chrysochromulina_ericina_virus(100.0%)	1	NA	NA
WP_165229808.1|1168205_1169207_+	agmatinase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	26.8	5.6e-09
>prophage 80
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1173604	1177895	5120341		Chrysochromulina_ericina_virus(50.0%)	5	NA	NA
WP_165229820.1|1173604_1174732_+	alanine--glyoxylate aminotransferase family protein	NA	A0A0N9QIZ2	Chrysochromulina_ericina_virus	38.8	2.5e-66
WP_165229822.1|1174733_1175018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165229825.1|1175060_1176077_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_165229828.1|1176057_1176510_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165229831.1|1176560_1177895_-	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.6	5.9e-14
>prophage 81
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1185128	1186304	5120341		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_165229851.1|1185128_1186304_+	glutathione-dependent formaldehyde dehydrogenase	NA	A0A0G2YAX3	Acanthamoeba_polyphaga_mimivirus	28.8	2.3e-09
>prophage 82
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1221622	1226853	5120341	tRNA	Bodo_saltans_virus(50.0%)	4	NA	NA
WP_165229939.1|1221622_1224472_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	47.2	6.2e-21
WP_165229942.1|1224561_1225044_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_165229945.1|1225033_1225900_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_165229948.1|1225917_1226853_+	bifunctional riboflavin kinase/FAD synthetase	NA	A0A1V0SJE1	Klosneuvirus	33.6	3.9e-12
>prophage 83
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1248827	1251289	5120341		Bacillus_virus(50.0%)	2	NA	NA
WP_165238717.1|1248827_1250159_+	insulinase family protein	NA	G3MBJ8	Bacillus_virus	29.2	8.4e-45
WP_165229989.1|1250236_1251289_+	PAS domain-containing protein	NA	Q8QNA2	Ectocarpus_siliculosus_virus	32.7	8.8e-05
>prophage 84
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1264518	1265568	5120341		Geobacillus_virus(100.0%)	1	NA	NA
WP_165230036.1|1264518_1265568_-	transglycosylase SLT domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	57.8	5.6e-28
>prophage 85
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1279796	1280033	5120341		Pseudomonas_phage(100.0%)	1	NA	NA
WP_165230088.1|1279796_1280033_+	carbon storage regulator CsrA	NA	A0A0U1UNS3	Pseudomonas_phage	49.3	4.2e-08
>prophage 86
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1306815	1308581	5120341		Ectocarpus_siliculosus_virus(50.0%)	2	NA	NA
WP_165230173.1|1306815_1307904_-	HAMP domain-containing histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	28.3	2.5e-10
WP_165230176.1|1307900_1308581_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.8	1.0e-30
>prophage 87
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1318729	1319755	5120341		Acinetobacter_phage(100.0%)	1	NA	NA
WP_165230203.1|1318729_1319755_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	35.8	3.7e-40
>prophage 88
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1326700	1328512	5120341		Bacillus_virus(100.0%)	1	NA	NA
WP_165238733.1|1326700_1328512_-	DEDD exonuclease domain-containing protein	NA	G3MAD3	Bacillus_virus	33.7	1.4e-13
>prophage 89
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1333675	1334671	5120341		Lactobacillus_phage(100.0%)	1	NA	NA
WP_165230230.1|1333675_1334671_+	hypothetical protein	NA	A0A2P0ZLG0	Lactobacillus_phage	43.4	1.1e-12
>prophage 90
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1346952	1348737	5120341		Catovirus(100.0%)	1	NA	NA
WP_165230266.1|1346952_1348737_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	24.3	4.4e-49
>prophage 91
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1364355	1365384	5120341		Ostreococcus_tauri_virus(100.0%)	1	NA	NA
WP_165230319.1|1364355_1365384_+	6-phosphofructokinase	NA	H8ZJH0	Ostreococcus_tauri_virus	29.2	1.5e-12
>prophage 92
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1373048	1375214	5120341		Cannes_8_virus(100.0%)	1	NA	NA
WP_165230337.1|1373048_1375214_-	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	T2AWK4	Cannes_8_virus	27.5	8.9e-20
>prophage 93
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1385869	1391972	5120341		Streptomyces_phage(50.0%)	3	NA	NA
WP_165230372.1|1385869_1389868_+	DNA polymerase III subunit alpha	NA	A0A0K1Y8F0	Streptomyces_phage	31.1	5.2e-98
WP_165230374.1|1389911_1390628_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_165238743.1|1390703_1391972_+	DNA polymerase IV	NA	A0A218MNF2	uncultured_virus	28.1	1.5e-14
>prophage 94
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1419482	1423031	5120341		Streptomyces_phage(100.0%)	1	NA	NA
WP_165230436.1|1419482_1423031_+	DNA polymerase III subunit alpha	NA	A0A291AVA6	Streptomyces_phage	53.8	0.0e+00
>prophage 95
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1436995	1444002	5120341		Bacillus_phage(66.67%)	9	NA	NA
WP_165230476.1|1436995_1438831_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	23.5	2.3e-32
WP_165230479.1|1438827_1440618_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.5	7.4e-28
WP_165230482.1|1440782_1441175_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_165230485.1|1441192_1441540_+	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA	NA
WP_165230488.1|1441532_1442078_+	Trp biosynthesis-associated membrane protein	NA	NA	NA	NA	NA
WP_165230491.1|1442099_1442294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165230494.1|1442319_1442757_+	DUF2752 domain-containing protein	NA	NA	NA	NA	NA
WP_165230497.1|1442775_1443105_-	DUF4190 domain-containing protein	NA	NA	NA	NA	NA
WP_165230500.1|1443219_1444002_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	40.9	1.2e-35
>prophage 96
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1459111	1460892	5120341		Anomala_cuprea_entomopoxvirus(100.0%)	2	NA	NA
WP_165230528.1|1459111_1460104_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	20.6	8.8e-07
WP_165230531.1|1460100_1460892_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.6	2.8e-11
>prophage 97
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1466520	1469217	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165230540.1|1466520_1469217_+	DNA polymerase I	NA	X2JUL6	Bacillus_phage	35.9	2.2e-39
>prophage 98
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1483308	1484523	5120341		Burkholderia_phage(100.0%)	1	NA	NA
WP_165230571.1|1483308_1484523_-	acyltransferase	NA	A9YX16	Burkholderia_phage	27.6	1.0e-09
>prophage 99
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1504462	1505416	5120341		Synechococcus_phage(100.0%)	1	NA	NA
WP_165230629.1|1504462_1505416_-	sigma-70 family RNA polymerase sigma factor	NA	G8CLC7	Synechococcus_phage	36.3	3.5e-37
>prophage 100
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1527226	1529320	5120341		Bacillus_virus(100.0%)	1	NA	NA
WP_165230703.1|1527226_1529320_+	type IIA DNA topoisomerase subunit B	NA	G3M9Z3	Bacillus_virus	36.7	1.6e-103
>prophage 101
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1534318	1545197	5120341	tRNA,protease	Staphylococcus_phage(50.0%)	8	NA	NA
WP_165230724.1|1534318_1536805_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	33.3	3.3e-95
WP_165230727.1|1537436_1538207_-	3-oxoacyl-ACP reductase FabG	NA	NA	NA	NA	NA
WP_165230730.1|1538230_1538581_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_165230733.1|1538721_1539354_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165230736.1|1539506_1541987_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	43.8	1.4e-189
WP_165230740.1|1541990_1543445_-|protease	26S protease regulatory subunit	protease	E5EQU5	Bathycoccus_sp._RCC1105_virus	29.4	3.9e-19
WP_165230743.1|1543462_1544332_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_165230746.1|1544342_1545197_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	32.0	1.7e-06
>prophage 102
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1555365	1557231	5120341		Tupanvirus(100.0%)	1	NA	NA
WP_165230769.1|1555365_1557231_+	elongation factor 4	NA	A0A2K9L6L3	Tupanvirus	40.3	2.0e-20
>prophage 103
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1565449	1567279	5120341		Catovirus(100.0%)	1	NA	NA
WP_165230782.1|1565449_1567279_+	AMP-binding protein	NA	A0A1V0SBX8	Catovirus	24.5	4.4e-44
>prophage 104
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1581232	1582264	5120341		Pseudomonas_phage(100.0%)	1	NA	NA
WP_165230832.1|1581232_1582264_+	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	47.8	5.1e-50
>prophage 105
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1586451	1587726	5120341		Tupanvirus(100.0%)	1	NA	NA
WP_165230849.1|1586451_1587726_+	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	30.7	8.3e-34
>prophage 106
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1603770	1615632	5120341	tRNA	Bacillus_phage(20.0%)	11	NA	NA
WP_165230886.1|1603770_1606572_-	PAS domain S-box protein	NA	W8CYF6	Bacillus_phage	32.9	2.4e-25
WP_165238791.1|1606753_1607500_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_165230889.1|1607519_1608248_+	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_165230892.1|1608252_1609044_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.2	5.2e-18
WP_165230896.1|1609099_1610734_+	hypothetical protein	NA	B5LWN0	Feldmannia_species_virus	30.2	1.8e-20
WP_165230899.1|1610740_1611136_-	transcriptional repressor	NA	NA	NA	NA	NA
WP_165230902.1|1611122_1612118_-	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_165230905.1|1612123_1612918_-	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	29.6	6.0e-14
WP_165230908.1|1612914_1613781_-	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_165230911.1|1613856_1614177_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_165230914.1|1614234_1615632_+|tRNA	glycine--tRNA ligase	tRNA	A0A1V0SAN4	Catovirus	24.2	2.1e-38
>prophage 107
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1618816	1624535	5120341		Gordonia_phage(33.33%)	5	NA	NA
WP_165238793.1|1618816_1619638_+	mucin-2 protein	NA	Q2TLT9	Gordonia_phage	28.5	5.4e-10
WP_165230926.1|1619790_1621062_+	deoxyguanosinetriphosphate triphosphohydrolase	NA	NA	NA	NA	NA
WP_165230929.1|1621096_1621729_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165230932.1|1621725_1622640_+	2-hydroxyacid dehydrogenase	NA	M1HBE3	Paramecium_bursaria_Chlorella_virus	26.8	2.1e-07
WP_165230935.1|1622660_1624535_+	DNA primase	NA	B8Q5B5	Abalone_shriveling_syndrome-associated_virus	29.4	1.9e-34
>prophage 108
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1629007	1631814	5120341	tRNA	Tokyovirus(50.0%)	2	NA	NA
WP_165230956.1|1629007_1630447_-	serine/threonine protein kinase	NA	A0A146JFA3	Tokyovirus	29.9	1.7e-14
WP_165230959.1|1630551_1631814_+|tRNA	tyrosine--tRNA ligase	tRNA	A0A1S6UA79	Serratia_phage	38.7	1.7e-63
>prophage 109
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1641291	1641537	5120341		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_165230980.1|1641291_1641537_-	acyl carrier protein	NA	E3SMK8	Prochlorococcus_phage	45.6	1.4e-06
>prophage 110
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1645257	1646184	5120341		Mycobacterium_phage(100.0%)	1	NA	NA
WP_165238799.1|1645257_1646184_+	alpha/beta fold hydrolase	NA	A0A249XU20	Mycobacterium_phage	29.2	1.8e-14
>prophage 111
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1650157	1651816	5120341		Staphylococcus_phage(100.0%)	1	NA	NA
WP_165230998.1|1650157_1651816_+	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	26.4	2.6e-27
>prophage 112
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1662705	1666972	5120341		Bacillus_phage(50.0%)	2	NA	NA
WP_165231015.1|1662705_1663377_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.7	4.7e-28
WP_165231018.1|1665394_1666972_+	long-chain-fatty-acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	29.3	2.2e-31
>prophage 113
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1670618	1675499	5120341		Agrobacterium_phage(50.0%)	5	NA	NA
WP_165231030.1|1670618_1671773_+	bifunctional RNase H/acid phosphatase	NA	A0A2L0V0T1	Agrobacterium_phage	34.2	4.3e-05
WP_165231033.1|1671769_1672333_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165231037.1|1672319_1673267_-	ATP-dependent DNA ligase	NA	NA	NA	NA	NA
WP_165231040.1|1673263_1674022_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_165231043.1|1674047_1675499_+	RNB domain-containing ribonuclease	NA	A0A2H4UVB7	Bodo_saltans_virus	26.7	2.2e-06
>prophage 114
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1687076	1688555	5120341		Tupanvirus(100.0%)	1	NA	NA
WP_165231073.1|1687076_1688555_-	selenocysteine-specific elongation factor	NA	A0A2K9KZ60	Tupanvirus	27.0	1.3e-09
>prophage 115
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1701420	1708451	5120341		Anomala_cuprea_entomopoxvirus(33.33%)	8	NA	NA
WP_165231097.1|1701420_1702200_+	amino acid ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.0	6.7e-10
WP_165231100.1|1702257_1703100_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_165231103.1|1703122_1703713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165231106.1|1703709_1704804_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_165238830.1|1704815_1705775_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	37.6	9.1e-33
WP_165231109.1|1705771_1706593_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_165231112.1|1706589_1707372_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_165231115.1|1707407_1708451_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A2H4UUK0	Bodo_saltans_virus	27.5	1.4e-18
>prophage 116
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1719532	1723005	5120341		Cedratvirus(100.0%)	2	NA	NA
WP_165238834.1|1719532_1722262_-	ATP-binding cassette domain-containing protein	NA	A0A285PWH2	Cedratvirus	27.5	5.6e-11
WP_165231151.1|1722258_1723005_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	25.6	1.3e-07
>prophage 117
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1735353	1736250	5120341		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_165231184.1|1735353_1736250_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.8	8.5e-17
>prophage 118
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1744794	1745469	5120341		Pseudomonas_phage(100.0%)	1	NA	NA
WP_165231208.1|1744794_1745469_-	thymidine kinase	NA	G9I9I2	Pseudomonas_phage	39.5	3.7e-25
>prophage 119
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1748570	1749935	5120341		Synechococcus_phage(100.0%)	1	NA	NA
WP_165231223.1|1748570_1749935_+	glucose-6-phosphate dehydrogenase	NA	A0A222YYZ2	Synechococcus_phage	33.3	4.4e-57
>prophage 120
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1760905	1761412	5120341		Streptomyces_phage(100.0%)	1	NA	NA
WP_165238845.1|1760905_1761412_+	dUTP diphosphatase	NA	A0A2L1IVN2	Streptomyces_phage	61.4	8.1e-41
>prophage 121
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1766675	1767791	5120341		Streptococcus_phage(100.0%)	1	NA	NA
WP_165231284.1|1766675_1767791_+	class I SAM-dependent RNA methyltransferase	NA	D0R096	Streptococcus_phage	32.4	6.9e-16
>prophage 122
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1803109	1804579	5120341		Freshwater_phage(100.0%)	1	NA	NA
WP_165231371.1|1803109_1804579_+	M23 family metallopeptidase	NA	A0A1B0XUH3	Freshwater_phage	40.8	3.3e-10
>prophage 123
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1813517	1815044	5120341		Mocis_latipes_granulovirus(100.0%)	1	NA	NA
WP_165231392.1|1813517_1815044_-	ATP-dependent DNA ligase	NA	A0A162GX28	Mocis_latipes_granulovirus	23.8	4.4e-05
>prophage 124
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1820072	1824352	5120341		Orpheovirus(50.0%)	5	NA	NA
WP_165231410.1|1820072_1821401_+	cytochrome P450	NA	A0A2I2L481	Orpheovirus	22.3	4.1e-15
WP_165231414.1|1821408_1821603_+	ferredoxin	NA	NA	NA	NA	NA
WP_165231417.1|1821603_1822164_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_165231420.1|1822160_1823618_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_165231423.1|1823614_1824352_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	33.3	2.8e-05
>prophage 125
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1836882	1837557	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165231462.1|1836882_1837557_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.1	3.6e-36
>prophage 126
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1846685	1850711	5120341		Planktothrix_phage(50.0%)	2	NA	NA
WP_165231487.1|1846685_1847423_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.3	3.6e-13
WP_165238876.1|1847450_1850711_+	serine hydrolase	NA	V5R513	Mycobacterium_phage	25.3	1.7e-06
>prophage 127
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1869173	1872014	5120341		Hokovirus(100.0%)	1	NA	NA
WP_165231529.1|1869173_1872014_-	response regulator	NA	A0A1V0SGX0	Hokovirus	31.5	9.5e-54
>prophage 128
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1884516	1887370	5120341		Streptococcus_phage(50.0%)	4	NA	NA
WP_165231565.1|1884516_1885500_+	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	39.1	4.1e-12
WP_165231568.1|1885502_1885694_+	ferredoxin	NA	NA	NA	NA	NA
WP_165231570.1|1885698_1886613_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
WP_165231573.1|1886614_1887370_+	glucose 1-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	27.0	7.4e-14
>prophage 129
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1897191	1898472	5120341		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_165231597.1|1897191_1898472_-	alpha/beta hydrolase	NA	A0A0G2Y6W1	Acanthamoeba_polyphaga_mimivirus	31.2	9.6e-06
>prophage 130
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1904542	1906084	5120341		Vibrio_phage(100.0%)	1	NA	NA
WP_165231610.1|1904542_1906084_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	25.8	1.3e-25
>prophage 131
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1914104	1915559	5120341		Indivirus(100.0%)	1	NA	NA
WP_165231641.1|1914104_1915559_+	cryptochrome/photolyase family protein	NA	A0A1V0SE91	Indivirus	36.7	4.8e-78
>prophage 132
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1923875	1925863	5120341		Micromonas_sp._RCC1109_virus(100.0%)	2	NA	NA
WP_165231665.1|1923875_1924772_+	acetaldehyde dehydrogenase (acetylating)	NA	E5EQ71	Micromonas_sp._RCC1109_virus	33.6	2.6e-34
WP_165231668.1|1924768_1925863_+	4-hydroxy-2-oxovalerate aldolase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	31.7	6.9e-37
>prophage 133
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1938028	1939495	5120341		Staphylococcus_phage(100.0%)	1	NA	NA
WP_165231699.1|1938028_1939495_-	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	26.9	3.8e-38
>prophage 134
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1946394	1947120	5120341		Staphylococcus_phage(100.0%)	1	NA	NA
WP_165238910.1|1946394_1947120_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	38.5	8.6e-44
>prophage 135
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1961834	1964956	5120341	protease	Agrobacterium_phage(66.67%)	3	NA	NA
WP_165231756.1|1961834_1962443_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	43.2	8.0e-35
WP_165231759.1|1962439_1963042_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	47.4	5.5e-44
WP_165231762.1|1963045_1964956_-	EAL domain-containing protein	NA	G3MA91	Bacillus_virus	31.8	1.1e-16
>prophage 136
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1977268	1978876	5120341		Staphylococcus_phage(100.0%)	1	NA	NA
WP_165231810.1|1977268_1978876_+	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	26.2	8.1e-26
>prophage 137
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1982543	1984175	5120341		Staphylococcus_phage(100.0%)	1	NA	NA
WP_165231819.1|1982543_1984175_+	acyl-CoA synthetase	NA	A0A2H4PQM9	Staphylococcus_phage	22.8	1.1e-14
>prophage 138
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	1992951	1994514	5120341		Catovirus(100.0%)	1	NA	NA
WP_165231843.1|1992951_1994514_-	AMP-binding protein	NA	A0A1V0SBX8	Catovirus	23.6	1.1e-06
>prophage 139
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2003719	2008267	5120341		Mycobacterium_phage(50.0%)	3	NA	NA
WP_165231875.1|2003719_2004475_-	MBL fold metallo-hydrolase	NA	A0A221J762	Mycobacterium_phage	67.4	1.2e-11
WP_165231878.1|2004396_2005095_-	maleylpyruvate isomerase family mycothiol-dependent enzyme	NA	NA	NA	NA	NA
WP_165231881.1|2005243_2008267_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	52.9	1.0e-295
>prophage 140
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2013313	2015139	5120341		Thermobifida_phage(50.0%)	2	NA	NA
WP_165238932.1|2013313_2014141_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	35.5	1.1e-10
WP_165238930.1|2014164_2015139_+	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	NA	A1IMD5	Streptococcus_phage	32.9	8.9e-28
>prophage 141
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2025036	2026566	5120341		Cyanophage(100.0%)	1	NA	NA
WP_165231927.1|2025036_2026566_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	36.2	5.1e-78
>prophage 142
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2044360	2048574	5120341		Staphylococcus_phage(50.0%)	3	NA	NA
WP_165238942.1|2044360_2045257_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.1	1.0e-17
WP_165231967.1|2045374_2046199_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_165231970.1|2046198_2048574_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	A0A0P0I429	Acinetobacter_phage	25.0	1.9e-39
>prophage 143
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2053030	2057877	5120341		environmental_halophage(33.33%)	5	NA	NA
WP_165231988.1|2053030_2054272_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	46.9	2.8e-111
WP_165231991.1|2054276_2054723_+	SUF system NifU family Fe-S cluster assembly protein	NA	A0A0K1LSF9	Mycobacterium_phage	44.8	9.1e-20
WP_165231994.1|2054715_2055117_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA	NA
WP_165231997.1|2056039_2056912_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_165232000.1|2056908_2057877_-	ABC transporter ATP-binding protein	NA	R4TX06	Phaeocystis_globosa_virus	23.5	1.5e-11
>prophage 144
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2061018	2066274	5120341		Rhodococcus_phage(33.33%)	4	NA	NA
WP_165232018.1|2061018_2061921_-	peptidase	NA	A0A1I9SA48	Rhodococcus_phage	43.9	1.8e-46
WP_165232021.1|2061942_2063541_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A1B0RXA0	Streptococcus_phage	27.8	3.5e-37
WP_165232024.1|2063570_2064389_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_165232028.1|2064399_2066274_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.2	1.1e-42
>prophage 145
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2069987	2076015	5120341		Diadromus_pulchellus_ascovirus(50.0%)	4	NA	NA
WP_165232045.1|2069987_2070713_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	30.9	2.4e-09
WP_165232048.1|2070714_2071497_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_165238946.1|2071564_2073268_+	Mur ligase	NA	NA	NA	NA	NA
WP_165232052.1|2073234_2076015_-	cyanophycin synthetase	NA	S4VXG8	Pandoravirus	27.0	2.1e-05
>prophage 146
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2080847	2083419	5120341		Bacillus_phage(50.0%)	3	NA	NA
WP_165232069.1|2080847_2081660_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.8	5.0e-08
WP_165232072.1|2081669_2082131_+	NfeD family protein	NA	NA	NA	NA	NA
WP_165232075.1|2082165_2083419_+	SPFH/Band 7/PHB domain protein	NA	A0A2P1EMF1	Moumouvirus	32.3	2.3e-20
>prophage 147
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2089726	2090506	5120341		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_165232102.1|2089726_2090506_-	3-oxoacyl-ACP reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	35.2	2.4e-23
>prophage 148
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2099287	2101863	5120341		Streptomyces_phage(50.0%)	3	NA	NA
WP_165232123.1|2099287_2099755_+	NUDIX domain-containing protein	NA	A0A0E3JJF3	Streptomyces_phage	32.5	8.6e-05
WP_165232126.1|2099822_2100923_+	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
WP_165232129.1|2100939_2101863_-	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.3	6.7e-17
>prophage 149
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2107239	2107848	5120341		Synechococcus_phage(100.0%)	1	NA	NA
WP_165238960.1|2107239_2107848_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	36.3	8.6e-13
>prophage 150
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2116564	2118001	5120341		Klosneuvirus(100.0%)	1	NA	NA
WP_165232165.1|2116564_2118001_+	GuaB1 family IMP dehydrogenase-related protein	NA	A0A1V0SHK8	Klosneuvirus	30.1	1.7e-46
>prophage 151
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2123749	2128560	5120341		Saccharomonospora_phage(50.0%)	2	NA	NA
WP_165232175.1|2123749_2127169_+	error-prone DNA polymerase	NA	Q8W6C3	Saccharomonospora_phage	26.9	4.2e-88
WP_165238970.1|2127204_2128560_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	31.3	3.4e-25
>prophage 152
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2136855	2137518	5120341		Mollivirus(100.0%)	1	NA	NA
WP_165232205.1|2136855_2137518_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	27.2	2.5e-05
>prophage 153
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2146667	2152617	5120341		Tupanvirus(50.0%)	3	NA	NA
WP_165232232.1|2146667_2147909_+	cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase	NA	A0A2K9L6B7	Tupanvirus	33.0	2.7e-29
WP_165232235.1|2147912_2148758_-	PAC2 family protein	NA	NA	NA	NA	NA
WP_165232238.1|2148885_2152617_+	methionine synthase	NA	A0A140XBC7	Dickeya_phage	60.7	6.7e-15
>prophage 154
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2158083	2159832	5120341		Hokovirus(100.0%)	1	NA	NA
WP_165232250.1|2158083_2159832_+	proteasome ATPase	NA	A0A1V0SG63	Hokovirus	37.3	2.0e-33
>prophage 155
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2174163	2176980	5120341		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_165232301.1|2174163_2176980_+	DEAD/DEAH box helicase	NA	M1HV25	Acanthocystis_turfacea_Chlorella_virus	34.7	5.0e-71
>prophage 156
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2181949	2182876	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165232319.1|2181949_2182876_-	5'-3' exonuclease	NA	F8WQ40	Bacillus_phage	27.5	2.2e-15
>prophage 157
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2191728	2195763	5120341		Sulfolobus_monocaudavirus(50.0%)	5	NA	NA
WP_165238990.1|2191728_2192463_+	polyprenol monophosphomannose synthase	NA	A0A0N7A8R9	Sulfolobus_monocaudavirus	46.5	3.4e-24
WP_165232340.1|2192462_2192954_+	FxsA family protein	NA	NA	NA	NA	NA
WP_165232343.1|2192969_2193353_-	RNA polymerase-binding protein RbpA	NA	NA	NA	NA	NA
WP_165232346.1|2193547_2194954_-	MFS transporter	NA	NA	NA	NA	NA
WP_165232349.1|2194950_2195763_-	glycerophosphodiester phosphodiesterase	NA	A0A173GBD0	Staphylococcus_phage	25.8	5.2e-13
>prophage 158
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2207250	2209635	5120341		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_165232387.1|2207250_2209635_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	32.4	2.7e-118
>prophage 159
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2218500	2220309	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165232418.1|2218500_2220309_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	1.9e-44
>prophage 160
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2224059	2231486	5120341		Klosneuvirus(33.33%)	6	NA	NA
WP_165232435.1|2224059_2224902_+	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	30.4	1.3e-22
WP_165232437.1|2224898_2225960_+	D-TA family PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_165232439.1|2226435_2227173_+	peptidylprolyl isomerase	NA	A0A1V0SCU1	Indivirus	41.1	1.4e-09
WP_165232441.1|2227182_2228058_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_165232444.1|2228064_2228571_-	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
WP_165232447.1|2229029_2231486_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	28.5	9.1e-45
>prophage 161
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2235139	2236300	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165232460.1|2235139_2236300_+	exonuclease SbcCD subunit D	NA	A0A1X9SFX6	Bacillus_phage	25.8	4.3e-05
>prophage 162
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2247570	2250441	5120341		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_165232491.1|2247570_2250441_-	aminomethyl-transferring glycine dehydrogenase	NA	M4QFZ1	Prochlorococcus_phage	48.6	1.4e-249
>prophage 163
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2267205	2270122	5120341		uncultured_Caudovirales_phage(50.0%)	3	NA	NA
WP_165232545.1|2267205_2268252_+	iron ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	23.2	5.6e-12
WP_165232548.1|2268251_2269325_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_165232551.1|2269321_2270122_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.3	4.0e-10
>prophage 164
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2278751	2280683	5120341		Mycobacterium_phage(100.0%)	1	NA	NA
WP_165232572.1|2278751_2280683_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	28.0	2.5e-21
>prophage 165
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2330240	2331836	5120341		Tupanvirus(100.0%)	1	NA	NA
WP_165232693.1|2330240_2331836_+	catalase	NA	A0A2K9L572	Tupanvirus	42.1	7.6e-93
>prophage 166
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2340279	2341088	5120341		Hokovirus(50.0%)	2	NA	NA
WP_165232731.1|2340279_2340675_+	cupin domain-containing protein	NA	A0A1V0SH58	Hokovirus	45.9	2.4e-24
WP_165232734.1|2340641_2341088_-	DUF4326 domain-containing protein	NA	A0A142K9N0	Gordonia_phage	45.2	3.3e-22
>prophage 167
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2367142	2368174	5120341		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_165239009.1|2367142_2368174_+	SIS domain-containing protein	NA	M1IH70	Paramecium_bursaria_Chlorella_virus	31.4	3.7e-24
>prophage 168
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2383858	2397316	5120341		uncultured_Mediterranean_phage(28.57%)	11	NA	NA
WP_165232855.1|2383858_2384602_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	29.2	1.2e-08
WP_165232858.1|2384598_2385480_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	36.7	1.7e-06
WP_165232861.1|2385811_2386882_-	AAA family ATPase	NA	Q8JL10	Natrialba_phage	34.8	3.1e-21
WP_165232864.1|2387133_2387418_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_165232867.1|2387453_2387936_+	DUF3060 domain-containing protein	NA	NA	NA	NA	NA
WP_165232870.1|2387932_2390488_-	DUF3516 domain-containing protein	NA	M1I6E2	Acanthocystis_turfacea_Chlorella_virus	31.2	1.1e-40
WP_165232873.1|2390484_2391402_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	29.0	7.6e-29
WP_165232876.1|2391404_2392529_-	alanine dehydrogenase	NA	NA	NA	NA	NA
WP_165232878.1|2392525_2393119_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_165232881.1|2393143_2395597_+	aminopeptidase N	NA	A0A2K9L1R3	Tupanvirus	29.5	5.7e-39
WP_165232883.1|2395624_2397316_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.0	3.9e-140
>prophage 169
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2414930	2418980	5120341		Dickeya_phage(50.0%)	4	NA	NA
WP_165232921.1|2414930_2416361_-	argininosuccinate synthase	NA	A0A140XAJ5	Dickeya_phage	66.7	2.0e-44
WP_165232924.1|2416357_2416882_-	arginine repressor	NA	NA	NA	NA	NA
WP_165232927.1|2416878_2417823_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_165232930.1|2417819_2418980_-	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.5	9.3e-16
>prophage 170
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2426382	2427384	5120341		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_165232954.1|2426382_2427384_+	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	32.7	1.3e-21
>prophage 171
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2433846	2434953	5120341	tRNA	Tupanvirus(100.0%)	1	NA	NA
WP_165232962.1|2433846_2434953_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	34.0	3.0e-24
>prophage 172
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2438288	2439344	5120341		Tupanvirus(100.0%)	1	NA	NA
WP_165232972.1|2438288_2439344_-	PAS domain-containing protein	NA	A0A2K9L0Z8	Tupanvirus	24.4	6.1e-14
>prophage 173
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2443471	2446579	5120341		Agrobacterium_phage(50.0%)	4	NA	NA
WP_165232987.1|2443471_2444203_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	32.3	1.9e-14
WP_165239025.1|2444375_2444822_-	SseB family protein	NA	NA	NA	NA	NA
WP_165232989.1|2444945_2445785_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_165232991.1|2445772_2446579_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	2.5e-23
>prophage 174
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2454123	2456659	5120341		Staphylococcus_phage(100.0%)	3	NA	NA
WP_165233014.1|2454123_2455395_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	43.5	1.9e-91
WP_165233016.1|2455391_2456057_-	nicotinamide mononucleotide transporter	NA	NA	NA	NA	NA
WP_165233018.1|2456056_2456659_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	45.1	5.9e-38
>prophage 175
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2465822	2466365	5120341		Synechococcus_phage(100.0%)	1	NA	NA
WP_165233040.1|2465822_2466365_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	36.5	1.4e-11
>prophage 176
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2473317	2476804	5120341		Staphylococcus_phage(33.33%)	4	NA	NA
WP_165233051.1|2473317_2474508_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	60.2	1.2e-127
WP_165233054.1|2474603_2475803_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	36.0	2.4e-43
WP_165233057.1|2475828_2476155_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_165233060.1|2476204_2476804_-	guanylate kinase	NA	A0A223FN12	Murmansk_poxvirus	30.1	1.1e-15
>prophage 177
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2482819	2489339	5120341		Halovirus(33.33%)	7	NA	NA
WP_165233088.1|2482819_2483953_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	33.0	4.2e-45
WP_165233092.1|2484063_2484954_-	proline iminopeptidase-family hydrolase	NA	NA	NA	NA	NA
WP_165233095.1|2484950_2486225_-	dihydroorotase	NA	NA	NA	NA	NA
WP_165233098.1|2486217_2487177_-	aspartate carbamoyltransferase catalytic subunit	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	33.3	2.1e-29
WP_165233101.1|2487173_2487779_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
WP_165239031.1|2487847_2488879_-	dihydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_165233104.1|2488928_2489339_-	hypothetical protein	NA	A0A2L1IZA0	Streptomyces_phage	36.4	1.3e-07
>prophage 178
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2504874	2510880	5120341	tRNA	Bacillus_virus(66.67%)	5	NA	NA
WP_165239037.1|2504874_2507580_-|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L3D8	Tupanvirus	35.4	1.5e-61
WP_165233141.1|2507618_2507885_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165233143.1|2507881_2508328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165239039.1|2508339_2509596_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	42.4	3.3e-83
WP_165239041.1|2509719_2510880_-	dipeptide ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.8	1.5e-18
>prophage 179
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2516298	2517504	5120341		Planktothrix_phage(100.0%)	1	NA	NA
WP_165233155.1|2516298_2517504_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.8	1.5e-16
>prophage 180
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2524535	2525846	5120341	tRNA	Klosneuvirus(100.0%)	1	NA	NA
WP_165233170.1|2524535_2525846_-|tRNA	histidine--tRNA ligase	tRNA	A0A1V0SLE3	Klosneuvirus	22.0	2.2e-13
>prophage 181
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2534360	2541919	5120341		Orpheovirus(25.0%)	6	NA	NA
WP_165239049.1|2534360_2536595_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	40.3	3.2e-12
WP_165233195.1|2536800_2537358_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	40.4	1.6e-18
WP_165233197.1|2537365_2538610_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	34.4	5.5e-30
WP_165233199.1|2538609_2540532_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_165239051.1|2540533_2540830_-	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_165233201.1|2540896_2541919_-	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	23.5	5.3e-07
>prophage 182
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2560215	2562204	5120341	tRNA	Tupanvirus(100.0%)	1	NA	NA
WP_165233251.1|2560215_2562204_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	35.5	6.8e-107
>prophage 183
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2578324	2579767	5120341		Aeromonas_phage(100.0%)	1	NA	NA
WP_165233293.1|2578324_2579767_-	glycine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	42.2	5.3e-77
>prophage 184
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2588564	2589608	5120341		Mycobacterium_phage(100.0%)	1	NA	NA
WP_165233320.1|2588564_2589608_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	73.4	4.2e-132
>prophage 185
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2594977	2602080	5120341		Acinetobacter_phage(66.67%)	6	NA	NA
WP_165239071.1|2594977_2595892_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.1	6.0e-26
WP_165233338.1|2596001_2596382_+	DUF2867 domain-containing protein	NA	NA	NA	NA	NA
WP_165233341.1|2596371_2597640_-	guanine deaminase	NA	NA	NA	NA	NA
WP_165233344.1|2597636_2598437_-	xanthine dehydrogenase accessory protein XdhC	NA	NA	NA	NA	NA
WP_165233347.1|2598433_2600701_-	molybdopterin-dependent oxidoreductase	NA	A0A0P0I429	Acinetobacter_phage	44.6	6.8e-172
WP_165233350.1|2600697_2602080_-	xanthine dehydrogenase small subunit	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	5.3e-66
>prophage 186
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2616761	2617277	5120341		Pseudomonas_phage(100.0%)	1	NA	NA
WP_165233386.1|2616761_2617277_-	CinA family protein	NA	B5TK85	Pseudomonas_phage	39.9	1.2e-10
>prophage 187
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2624629	2631208	5120341		Mycobacterium_phage(33.33%)	6	NA	NA
WP_165233400.1|2624629_2627245_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	51.9	4.7e-100
WP_165233403.1|2627339_2628236_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
WP_165239073.1|2628271_2628928_-	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_165233405.1|2628998_2629916_-	LLM class F420-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_165233408.1|2629928_2630402_-	dihydrofolate reductase	NA	J9PU01	Bacillus_phage	37.1	1.0e-21
WP_165233411.1|2630398_2631208_-	thymidylate synthase	NA	A6M9A2	Geobacillus_virus	64.7	6.1e-99
>prophage 188
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2637368	2640745	5120341		Mycoplasma_phage(50.0%)	3	NA	NA
WP_165233426.1|2637368_2638901_+	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	37.2	1.0e-41
WP_165239078.1|2638926_2639250_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165233429.1|2639290_2640745_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.9	3.7e-38
>prophage 189
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2683162	2685205	5120341		Hokovirus(50.0%)	2	NA	NA
WP_165233537.1|2683162_2684497_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	26.6	1.3e-08
WP_165233540.1|2684518_2685205_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.1	6.3e-28
>prophage 190
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2689611	2690277	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165233556.1|2689611_2690277_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.0	1.2e-28
>prophage 191
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2696466	2697444	5120341		Shigella_phage(100.0%)	1	NA	NA
WP_165233574.1|2696466_2697444_+	glycosyltransferase family 2 protein	NA	S5FKN0	Shigella_phage	37.7	2.8e-45
>prophage 192
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2702578	2703520	5120341		Staphylococcus_phage(100.0%)	1	NA	NA
WP_165233586.1|2702578_2703520_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	37.4	5.2e-33
>prophage 193
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2708069	2712807	5120341		Bacillus_phage(100.0%)	3	NA	NA
WP_165233604.1|2708069_2708462_-	response regulator	NA	W8CYM9	Bacillus_phage	35.3	1.0e-11
WP_165233608.1|2708506_2709898_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_165233611.1|2710008_2712807_-	response regulator	NA	W8CYF6	Bacillus_phage	32.3	4.0e-28
>prophage 194
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2724929	2730356	5120341		Ectocarpus_siliculosus_virus(33.33%)	4	NA	NA
WP_165233635.1|2724929_2727395_+	sensor histidine kinase KdpD	NA	Q8QKV7	Ectocarpus_siliculosus_virus	24.0	3.4e-07
WP_165233638.1|2727391_2728081_+	response regulator transcription factor	NA	Q56AR1	Bacillus_thuringiensis_phage	31.3	7.2e-08
WP_165233641.1|2728091_2729306_+	cysteine desulfurase-like protein	NA	NA	NA	NA	NA
WP_165233644.1|2729444_2730356_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.0	4.3e-24
>prophage 195
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2740471	2743375	5120341		Wolbachia_phage(50.0%)	2	NA	NA
WP_165233668.1|2740471_2740906_+	Hsp20 family protein	NA	A0A1B2LRT2	Wolbachia_phage	29.3	5.0e-07
WP_165233671.1|2740966_2743375_-	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	34.6	3.2e-159
>prophage 196
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2760106	2761474	5120341		Mollivirus(100.0%)	1	NA	NA
WP_165233718.1|2760106_2761474_-	cytochrome P450	NA	A0A0M4JJK6	Mollivirus	33.9	2.3e-21
>prophage 197
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2772891	2774013	5120341		uncultured_virus(100.0%)	1	NA	NA
WP_165233758.1|2772891_2774013_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	A0A218MNE0	uncultured_virus	41.5	4.1e-69
>prophage 198
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2777054	2779064	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165233770.1|2777054_2779064_+	PAS domain S-box protein	NA	W8CYF6	Bacillus_phage	31.0	3.4e-29
>prophage 199
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2782548	2784123	5120341		Staphylococcus_phage(100.0%)	1	NA	NA
WP_165233780.1|2782548_2784123_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	25.8	3.3e-40
>prophage 200
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2789871	2791314	5120341		Pithovirus(100.0%)	1	NA	NA
WP_165233797.1|2789871_2791314_-	sugar ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	27.3	5.4e-05
>prophage 201
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2800248	2801817	5120341		Staphylococcus_phage(100.0%)	1	NA	NA
WP_165233820.1|2800248_2801817_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	27.4	6.7e-33
>prophage 202
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2807579	2808875	5120341		Pandoravirus(100.0%)	1	NA	NA
WP_165233845.1|2807579_2808875_-	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	A0A0B5JD48	Pandoravirus	26.5	8.8e-15
>prophage 203
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2820335	2824689	5120341		Streptococcus_phage(50.0%)	5	NA	NA
WP_165233886.1|2820335_2821583_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	54.2	1.4e-105
WP_165233889.1|2821615_2822365_+	ZIP family zinc transporter	NA	NA	NA	NA	NA
WP_165233892.1|2822361_2822790_+	DNA ligase	NA	NA	NA	NA	NA
WP_165233896.1|2822770_2823679_-	DNA ligase	NA	NA	NA	NA	NA
WP_165233899.1|2823675_2824689_-	ATP-dependent DNA ligase	NA	A0A291AUP8	Sinorhizobium_phage	36.9	5.6e-41
>prophage 204
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2851190	2852588	5120341		Mycobacterium_phage(100.0%)	1	NA	NA
WP_165233959.1|2851190_2852588_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	34.7	1.7e-35
>prophage 205
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2897278	2900802	5120341		Pandoravirus(33.33%)	5	NA	NA
WP_165234115.1|2897278_2898013_-	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	33.8	1.1e-17
WP_165234117.1|2898009_2898843_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_165234120.1|2898839_2899913_-	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	36.1	5.2e-05
WP_165234123.1|2900013_2900256_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_165234126.1|2900382_2900802_-	response regulator	NA	A0A220YL79	Alteromonas_virus	31.9	4.2e-11
>prophage 206
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2914826	2919064	5120341		Gordonia_phage(100.0%)	2	NA	NA
WP_165234161.1|2914826_2916947_-	acyltransferase	NA	A0A166XZF2	Gordonia_phage	35.0	1.2e-85
WP_165234163.1|2916943_2919064_-	acyltransferase	NA	A0A166XZF2	Gordonia_phage	33.8	1.2e-82
>prophage 207
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2938933	2942476	5120341		Bacillus_phage(66.67%)	6	NA	NA
WP_165234203.1|2938933_2939728_+	sigma-70 family RNA polymerase sigma factor	NA	A0A0Y0AU18	Bacillus_phage	32.5	4.4e-25
WP_165234206.1|2939952_2940192_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165234209.1|2940346_2940757_+	anti-sigma factor	NA	NA	NA	NA	NA
WP_165234213.1|2940770_2941583_+	RNA polymerase sigma factor SigF	NA	A0A0Y0AU18	Bacillus_phage	39.6	7.4e-28
WP_165234216.1|2941592_2941994_-	hypothetical protein	NA	NA	NA	NA	NA
WP_134720666.1|2942224_2942476_+	WhiB family transcriptional regulator	NA	A0A0K2FPH8	Mycobacterium_phage	47.5	7.9e-13
>prophage 208
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2949375	2950125	5120341		Stenotrophomonas_phage(100.0%)	1	NA	NA
WP_165234236.1|2949375_2950125_-	SOS response-associated peptidase	NA	V9IQW7	Stenotrophomonas_phage	35.2	1.9e-30
>prophage 209
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2960869	2961268	5120341		Hokovirus(100.0%)	1	NA	NA
WP_165234272.1|2960869_2961268_+	adenylyltransferase/cytidyltransferase family protein	NA	A0A1V0SGE7	Hokovirus	50.7	3.3e-29
>prophage 210
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2965112	2967999	5120341		Pandoravirus(50.0%)	2	NA	NA
WP_165234284.1|2965112_2966477_+	serine/threonine protein kinase	NA	S4VV57	Pandoravirus	32.2	5.4e-23
WP_165234287.1|2966481_2967999_+	acyl-CoA synthetase	NA	A0A2H4PQU7	Staphylococcus_phage	24.9	4.8e-20
>prophage 211
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2976432	2976801	5120341		Virus_Rctr197k(100.0%)	1	NA	NA
WP_165239140.1|2976432_2976801_+	HNH endonuclease	NA	A0A1P8DIY8	Virus_Rctr197k	48.0	9.2e-18
>prophage 212
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2982804	2985182	5120341	holin	Mycobacterium_phage(50.0%)	2	NA	NA
WP_165239142.1|2982804_2983608_-	alpha/beta hydrolase	NA	G9VYU4	Mycobacterium_phage	38.4	1.2e-09
WP_165239144.1|2983604_2985182_-|holin	glucose-methanol-choline oxidoreductase	holin	A0A1V0SI18	Klosneuvirus	34.2	1.5e-69
>prophage 213
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	2991441	2992767	5120341		Pandoravirus(100.0%)	1	NA	NA
WP_165234345.1|2991441_2992767_+	FAD-binding oxidoreductase	NA	S4VRT3	Pandoravirus	35.3	3.7e-24
>prophage 214
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3006205	3017685	5120341		Bacillus_phage(75.0%)	7	NA	NA
WP_165234392.1|3006205_3008233_-	ATP-dependent DNA helicase UvrD2	NA	S5M596	Bacillus_phage	26.2	8.6e-41
WP_165234395.1|3008306_3008558_+	mycoredoxin	NA	NA	NA	NA	NA
WP_165234398.1|3008561_3009488_-	NAD(+) diphosphatase	NA	NA	NA	NA	NA
WP_165234401.1|3009512_3010220_+	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_165234403.1|3010247_3011312_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4J2Q2	uncultured_Caudovirales_phage	36.8	5.5e-39
WP_165239146.1|3011281_3014431_-	ATP-dependent helicase	NA	S5M596	Bacillus_phage	23.2	5.1e-16
WP_165234406.1|3014472_3017685_-	ATP-dependent helicase	NA	A7KV33	Bacillus_phage	27.6	1.5e-23
>prophage 215
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3047480	3050294	5120341		Acinetobacter_phage(50.0%)	3	NA	NA
WP_165234485.1|3047480_3048089_-	(2Fe-2S)-binding protein	NA	A0A0P0IVM8	Acinetobacter_phage	42.6	1.1e-20
WP_165234488.1|3048085_3048913_-	xanthine dehydrogenase family protein subunit M	NA	NA	NA	NA	NA
WP_165234491.1|3048920_3050294_-	nitrate reductase	NA	Q9KX94	Enterobacteria_phage	41.8	6.6e-77
>prophage 216
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3054704	3062851	5120341		Klosneuvirus(33.33%)	9	NA	NA
WP_165239154.1|3054704_3055898_-	adenylyltransferase/sulfurtransferase MoeZ	NA	A0A1V0SIK8	Klosneuvirus	35.0	4.2e-11
WP_165239156.1|3056108_3056696_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165234505.1|3056744_3056969_+	DUF3107 domain-containing protein	NA	NA	NA	NA	NA
WP_165234509.1|3057014_3057290_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165234512.1|3057955_3058669_-	hydroxylase	NA	NA	NA	NA	NA
WP_165234515.1|3058728_3060348_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.8	8.1e-50
WP_165234518.1|3060358_3061312_+	adenosine deaminase	NA	NA	NA	NA	NA
WP_165234521.1|3061308_3062073_-	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_165234524.1|3062077_3062851_-	ParA family protein	NA	Q8JL10	Natrialba_phage	33.9	2.4e-15
>prophage 217
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3070972	3072481	5120341		Acinetobacter_phage(100.0%)	1	NA	NA
WP_165234548.1|3070972_3072481_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	34.3	5.0e-70
>prophage 218
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3097116	3098684	5120341		Bacillus_virus(50.0%)	2	NA	NA
WP_165234640.1|3097116_3097764_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	32.9	1.9e-10
WP_165234643.1|3097775_3098684_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	28.5	4.9e-12
>prophage 219
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3113110	3117007	5120341		Bacillus_phage(66.67%)	3	NA	NA
WP_165234670.1|3113110_3114754_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	24.0	2.9e-15
WP_165234673.1|3114771_3115485_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	37.6	1.1e-40
WP_165234676.1|3115576_3117007_-	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	28.5	2.1e-41
>prophage 220
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3127498	3127756	5120341		Mycobacterium_phage(100.0%)	1	NA	NA
WP_165234707.1|3127498_3127756_-	WhiB family transcriptional regulator	NA	A0A2P1CGA4	Mycobacterium_phage	67.9	4.1e-25
>prophage 221
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3130836	3131277	5120341		uncultured_virus(100.0%)	1	NA	NA
WP_165239162.1|3130836_3131277_+	adenylyltransferase/cytidyltransferase family protein	NA	A0A218MKF4	uncultured_virus	37.2	3.3e-14
>prophage 222
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3135470	3140479	5120341		Cryptophlebia_leucotreta_granulosis_virus(50.0%)	4	NA	NA
WP_165234733.1|3135470_3136757_-	glycosyltransferase family 1 protein	NA	Q7T5G5	Cryptophlebia_leucotreta_granulosis_virus	32.5	9.7e-06
WP_165239164.1|3136753_3138946_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_165234736.1|3139032_3139476_-	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_165234738.1|3139693_3140479_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.6	3.6e-11
>prophage 223
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3143542	3144733	5120341		Streptococcus_phage(100.0%)	1	NA	NA
WP_165234744.1|3143542_3144733_-	UDP-galactopyranose mutase	NA	E4ZFQ1	Streptococcus_phage	44.4	2.2e-92
>prophage 224
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3148639	3149707	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165234756.1|3148639_3149707_-	flap endonuclease	NA	F8WQ40	Bacillus_phage	30.4	3.3e-07
>prophage 225
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3154519	3155131	5120341		Planktothrix_phage(100.0%)	1	NA	NA
WP_165234769.1|3154519_3155131_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	27.3	4.6e-06
>prophage 226
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3165139	3165628	5120341		Tetraselmis_virus(100.0%)	1	NA	NA
WP_165239176.1|3165139_3165628_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	50.0	1.4e-18
>prophage 227
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3198635	3202543	5120341		Erysipelothrix_phage(66.67%)	3	NA	NA
WP_165234874.1|3198635_3199688_-	helix-turn-helix transcriptional regulator	NA	A0A220NRX7	Mycobacterium_phage	23.9	3.9e-05
WP_165234877.1|3199736_3201137_-	NAD(P)H-quinone dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.0	1.1e-26
WP_165239193.1|3201136_3202543_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.3	3.4e-44
>prophage 228
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3208245	3209898	5120341		Streptococcus_phage(100.0%)	1	NA	NA
WP_165234900.1|3208245_3209898_+	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	37.4	2.9e-79
>prophage 229
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3223437	3225284	5120341		Streptomyces_phage(50.0%)	2	NA	NA
WP_165234942.1|3223437_3223995_-	TerD family protein	NA	A0A1J0GW82	Streptomyces_phage	29.8	8.2e-10
WP_165234945.1|3223991_3225284_-	thymidine phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	44.8	2.4e-81
>prophage 230
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3229198	3230743	5120341		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_165239199.1|3229198_3230743_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.4	1.0e-09
>prophage 231
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3241885	3244627	5120341		Hokovirus(100.0%)	1	NA	NA
WP_165234974.1|3241885_3244627_+	response regulator	NA	A0A1V0SGX0	Hokovirus	32.6	3.7e-47
>prophage 232
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3254449	3255580	5120341		Bacillus_virus(100.0%)	1	NA	NA
WP_165234998.1|3254449_3255580_+	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	28.9	3.6e-12
>prophage 233
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3273018	3274590	5120341		Prochlorococcus_phage(100.0%)	1	NA	NA
WP_165235045.1|3273018_3274590_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	44.6	3.6e-63
>prophage 234
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3283575	3284571	5120341		Lactococcus_phage(100.0%)	1	NA	NA
WP_165235065.1|3283575_3284571_+	M23 family metallopeptidase	NA	A0A1P8BLL6	Lactococcus_phage	43.2	8.6e-10
>prophage 235
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3287736	3289998	5120341		Pandoravirus(100.0%)	1	NA	NA
WP_165235074.1|3287736_3289998_-	LLM class flavin-dependent oxidoreductase	NA	S4VRT3	Pandoravirus	35.7	5.8e-22
>prophage 236
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3297054	3302225	5120341		Escherichia_virus(50.0%)	3	NA	NA
WP_165235101.1|3297054_3298524_+	hypothetical protein	NA	Q7Y4B3	Escherichia_virus	32.9	1.4e-08
WP_165235104.1|3298520_3299390_+	DNA adenine methylase	NA	NA	NA	NA	NA
WP_165235107.1|3299804_3302225_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	38.1	5.0e-120
>prophage 237
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3307896	3318117	5120341		Streptomyces_phage(25.0%)	9	NA	NA
WP_165235133.1|3307896_3308784_-	glycerophosphodiester phosphodiesterase	NA	A0A2P1N091	Streptomyces_phage	50.9	3.0e-06
WP_165235136.1|3308880_3309426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165235139.1|3309425_3309923_+	sodium:proton antiporter	NA	NA	NA	NA	NA
WP_165235142.1|3309919_3310885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165235145.1|3310998_3312717_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	21.2	1.9e-12
WP_165235148.1|3312713_3314474_+	ABC transporter ATP-binding protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	25.4	2.0e-06
WP_165235151.1|3314614_3315214_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_165239219.1|3315226_3315886_-	NADPH-dependent F420 reductase	NA	NA	NA	NA	NA
WP_165235154.1|3315999_3318117_+	acyltransferase	NA	A0A166XZF2	Gordonia_phage	33.2	5.4e-78
>prophage 238
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3324864	3325845	5120341		Mycobacterium_phage(100.0%)	1	NA	NA
WP_165235178.1|3324864_3325845_+	Ku protein	NA	A0A076YN45	Mycobacterium_phage	47.2	5.0e-55
>prophage 239
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3332456	3338666	5120341		Bacillus_phage(66.67%)	5	NA	NA
WP_165239224.1|3332456_3333260_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.4	6.9e-18
WP_165235199.1|3333306_3334248_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_165235202.1|3334246_3335101_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_165239226.1|3335097_3336861_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.2	5.3e-55
WP_165239228.1|3336953_3338666_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.1	3.0e-39
>prophage 240
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3358847	3363905	5120341		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
WP_165235253.1|3358847_3360116_-	PDZ domain-containing protein	NA	A0A1B1IT49	uncultured_Mediterranean_phage	26.0	1.2e-16
WP_165235256.1|3360161_3360623_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165235259.1|3360619_3361213_-	RNA polymerase sigma factor SigE	NA	A0A0F6TH34	Sinorhizobium_phage	33.1	4.8e-08
WP_165235262.1|3361353_3362007_+	O-methyltransferase	NA	NA	NA	NA	NA
WP_165235265.1|3362007_3362349_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165235268.1|3362345_3363905_-	leucyl aminopeptidase family protein	NA	Q6GYZ8	Mycoplasma_phage	35.2	2.1e-39
>prophage 241
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3372110	3375284	5120341	tRNA	Tupanvirus(100.0%)	1	NA	NA
WP_165235294.1|3372110_3375284_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A2K9L9X8	Tupanvirus	33.3	4.3e-148
>prophage 242
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3380809	3383766	5120341		Streptomyces_phage(50.0%)	3	NA	NA
WP_165239237.1|3380809_3381754_+	hypothetical protein	NA	A0A2L1IVP0	Streptomyces_phage	46.9	8.7e-20
WP_165235309.1|3381935_3382106_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165235311.1|3382665_3383766_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	34.7	8.5e-19
>prophage 243
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3387169	3388450	5120341	tRNA	Tupanvirus(100.0%)	1	NA	NA
WP_165235319.1|3387169_3388450_+|tRNA	aspartate--tRNA(Asn) ligase	tRNA	A0A2K9L0E9	Tupanvirus	34.6	5.8e-59
>prophage 244
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3396595	3400202	5120341		Acanthocystis_turfacea_Chlorella_virus(50.0%)	2	NA	NA
WP_165235345.1|3396595_3397393_-	glycoside hydrolase family 16 protein	NA	M1I6P3	Acanthocystis_turfacea_Chlorella_virus	27.3	1.1e-12
WP_165235348.1|3398054_3400202_-	DEAD/DEAH box helicase	NA	A0A2H4PCN4	Arthrobacter_phage	29.0	5.3e-41
>prophage 245
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3404311	3405607	5120341		Rhizobium_phage(100.0%)	1	NA	NA
WP_165235363.1|3404311_3405607_-	hypothetical protein	NA	L7TKD2	Rhizobium_phage	48.2	7.2e-09
>prophage 246
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3409957	3410245	5120341		Gordonia_phage(100.0%)	1	NA	NA
WP_165239242.1|3409957_3410245_+	HNH endonuclease	NA	A0A0K0N676	Gordonia_phage	47.6	5.1e-08
>prophage 247
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3425910	3427149	5120341		Gordonia_phage(100.0%)	1	NA	NA
WP_165235433.1|3425910_3427149_+	exodeoxyribonuclease VII large subunit	NA	A0A1B3AYB4	Gordonia_phage	38.5	3.4e-64
>prophage 248
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3442885	3444079	5120341		Planktothrix_phage(100.0%)	1	NA	NA
WP_165239244.1|3442885_3444079_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	32.9	6.9e-22
>prophage 249
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3447285	3448998	5120341		Bacillus_virus(100.0%)	1	NA	NA
WP_165235475.1|3447285_3448998_-	FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	29.2	3.9e-26
>prophage 250
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3454895	3462186	5120341		Streptomyces_phage(25.0%)	6	NA	NA
WP_165235502.1|3454895_3455543_-	lytic transglycosylase domain-containing protein	NA	A0A2L1IVL5	Streptomyces_phage	70.7	5.7e-31
WP_165235505.1|3455866_3457207_-	PhoH family protein	NA	M4R2C8	Vibrio_phage	29.9	8.5e-37
WP_165235509.1|3457493_3458336_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	40.2	2.6e-15
WP_165235510.1|3458370_3459090_+	hemolysin III family protein	NA	NA	NA	NA	NA
WP_165235513.1|3459100_3460600_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_165235516.1|3460596_3462186_-	NAD(P)-binding protein	NA	A0A1V0SI18	Klosneuvirus	32.6	7.2e-59
>prophage 251
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3473736	3476190	5120341		Paramecium_bursaria_Chlorella_virus(50.0%)	3	NA	NA
WP_165235545.1|3473736_3474615_+	carbon-nitrogen hydrolase family protein	NA	A7ITI3	Paramecium_bursaria_Chlorella_virus	29.6	7.1e-16
WP_165235548.1|3474607_3474928_+	MSMEG_0570 family nitrogen starvation response protein	NA	NA	NA	NA	NA
WP_165235551.1|3474924_3476190_+	MSMEG_0569 family flavin-dependent oxidoreductase	NA	A0A2H4J2Q2	uncultured_Caudovirales_phage	37.4	3.6e-05
>prophage 252
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3487451	3488609	5120341		Pandoravirus(100.0%)	1	NA	NA
WP_165235581.1|3487451_3488609_-	cystathionine gamma-synthase	NA	A0A0B5JD48	Pandoravirus	30.6	5.8e-26
>prophage 253
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3495102	3496452	5120341		Ostreococcus_lucimarinus_virus(100.0%)	1	NA	NA
WP_165235598.1|3495102_3496452_+	AarF/ABC1/UbiB kinase family protein	NA	A0A0P0CRP3	Ostreococcus_lucimarinus_virus	27.5	5.6e-12
>prophage 254
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3512890	3516725	5120341		Streptococcus_phage(50.0%)	4	NA	NA
WP_165235656.1|3512890_3514279_-	cystathionine beta-synthase	NA	A0A1X9I5F1	Streptococcus_phage	40.3	5.5e-55
WP_165235659.1|3514319_3515363_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_165235662.1|3515359_3515851_+	DUF664 domain-containing protein	NA	NA	NA	NA	NA
WP_165235665.1|3515981_3516725_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.1	3.6e-29
>prophage 255
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3525669	3526950	5120341		Streptococcus_phage(100.0%)	1	NA	NA
WP_165235693.1|3525669_3526950_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	57.8	3.1e-137
>prophage 256
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3550639	3556048	5120341		Leptospira_phage(100.0%)	1	NA	NA
WP_165235745.1|3550639_3556048_-	PKD domain-containing protein	NA	S5VSX0	Leptospira_phage	27.9	1.4e-08
>prophage 257
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3572988	3583509	5120341		Acinetobacter_phage(25.0%)	8	NA	NA
WP_165235786.1|3572988_3575358_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	29.9	2.8e-35
WP_165235789.1|3575344_3576220_+	M15 family metallopeptidase	NA	NA	NA	NA	NA
WP_165235792.1|3576200_3577517_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_165235795.1|3577657_3578629_-	ribose-phosphate diphosphokinase	NA	A0A2K9L2G2	Tupanvirus	36.1	1.4e-44
WP_165239271.1|3578669_3580061_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2L2DII3	Acanthamoeba_polyphaga_mimivirus	29.8	3.4e-20
WP_165235798.1|3580362_3581382_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_165235801.1|3581515_3582097_+	dihydrofolate reductase family protein	NA	NA	NA	NA	NA
WP_165235804.1|3582093_3583509_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.3	4.6e-41
>prophage 258
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3602500	3603535	5120341		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_165239273.1|3602500_3603535_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	26.4	1.9e-07
>prophage 259
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3607629	3609096	5120341		Mycobacterium_phage(100.0%)	1	NA	NA
WP_165235870.1|3607629_3609096_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	32.1	1.4e-37
>prophage 260
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3612499	3616441	5120341		Tupanvirus(50.0%)	5	NA	NA
WP_165235883.1|3612499_3613564_+	histone deacetylase family protein	NA	A0A2K9L4C2	Tupanvirus	34.0	1.8e-21
WP_165239277.1|3613592_3614186_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_165239279.1|3614212_3614860_+	DUF4166 domain-containing protein	NA	NA	NA	NA	NA
WP_165235886.1|3614865_3615168_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165235889.1|3615241_3616441_+	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	43.6	1.0e-89
>prophage 261
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3628086	3631405	5120341		Planktothrix_phage(50.0%)	4	NA	NA
WP_165235925.1|3628086_3628848_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.2	1.1e-38
WP_165235928.1|3628919_3629060_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165235931.1|3629283_3629910_+	alpha-ketoglutarate-dependent dioxygenase AlkB	NA	NA	NA	NA	NA
WP_165235933.1|3629956_3631405_+	NADP-dependent phosphogluconate dehydrogenase	NA	E3SJC4	Synechococcus_phage	33.3	1.0e-35
>prophage 262
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3645372	3647067	5120341		Phormidium_phage(100.0%)	1	NA	NA
WP_165235961.1|3645372_3647067_+	AAA family ATPase	NA	U5XGM6	Phormidium_phage	42.0	4.4e-99
>prophage 263
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3652052	3671056	5120341		uncultured_Mediterranean_phage(80.0%)	6	NA	NA
WP_165235986.1|3652052_3653828_-	AAA domain-containing protein	NA	K4I1H4	Acidithiobacillus_phage	33.3	7.5e-25
WP_165235989.1|3653835_3654771_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165239283.1|3654779_3658703_-	N-6 DNA methylase	NA	A0A1B1IUC6	uncultured_Mediterranean_phage	26.0	3.6e-51
WP_165239285.1|3658768_3662200_-	N-6 DNA methylase	NA	A0A1B1IUC6	uncultured_Mediterranean_phage	31.4	1.6e-31
WP_165235992.1|3662954_3665831_-	DEAD/DEAH box helicase	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	25.5	1.0e-31
WP_165235995.1|3665827_3671056_-	DEAD/DEAH box helicase	NA	A0A1B1IUF6	uncultured_Mediterranean_phage	23.4	2.8e-67
>prophage 264
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3680666	3681740	5120341		Wolbachia_phage(100.0%)	1	NA	NA
WP_165236015.1|3680666_3681740_+	patatin	NA	A0A1B2LRS3	Wolbachia_phage	29.0	2.8e-14
>prophage 265
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3685288	3690820	5120341		uncultured_virus(50.0%)	5	NA	NA
WP_165236031.1|3685288_3686914_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	57.0	1.2e-157
WP_165236034.1|3687025_3687631_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165236037.1|3687650_3688394_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_165236040.1|3688433_3689456_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_165239293.1|3689452_3690820_-	beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	37.7	1.6e-70
>prophage 266
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3701253	3703605	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165236068.1|3701253_3703605_-	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.6	3.7e-11
>prophage 267
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3707487	3711716	5120341		Moraxella_phage(50.0%)	4	NA	NA
WP_165236079.1|3707487_3709812_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	45.8	1.2e-142
WP_165236081.1|3709885_3710731_-	trehalose-phosphatase	NA	NA	NA	NA	NA
WP_165236083.1|3710890_3711394_-	LytR C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_165236085.1|3711413_3711716_-	DUF3263 domain-containing protein	NA	A0A142KCL5	Gordonia_phage	47.9	4.0e-11
>prophage 268
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3729107	3729821	5120341		Pithovirus(100.0%)	1	NA	NA
WP_165236131.1|3729107_3729821_+	uracil-DNA glycosylase	NA	W5S5D2	Pithovirus	41.2	1.2e-29
>prophage 269
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3733699	3735340	5120341	holin	Klosneuvirus(100.0%)	1	NA	NA
WP_165236143.1|3733699_3735340_-|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	29.7	8.7e-52
>prophage 270
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3753271	3754648	5120341	tRNA	Moumouvirus(100.0%)	1	NA	NA
WP_165236195.1|3753271_3754648_-|tRNA	cysteine--tRNA ligase	tRNA	F1C984	Moumouvirus	30.2	1.4e-34
>prophage 271
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3757718	3759290	5120341		Hokovirus(100.0%)	1	NA	NA
WP_165236207.1|3757718_3759290_-	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	27.2	2.6e-13
>prophage 272
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3784099	3787964	5120341		Bacillus_phage(66.67%)	4	NA	NA
WP_165236257.1|3784099_3785281_+	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	31.4	1.2e-26
WP_165236261.1|3785277_3785955_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.9	1.7e-41
WP_165236263.1|3785956_3786556_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165236266.1|3786530_3787964_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	29.2	5.2e-24
>prophage 273
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3812375	3813899	5120341		Staphylococcus_phage(100.0%)	1	NA	NA
WP_165236314.1|3812375_3813899_-	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	27.6	5.1e-38
>prophage 274
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3831764	3832538	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165236346.1|3831764_3832538_-	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	42.1	1.7e-05
>prophage 275
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3844978	3846470	5120341		Anomala_cuprea_entomopoxvirus(50.0%)	2	NA	NA
WP_165236372.1|3844978_3845704_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.7	2.9e-07
WP_165236374.1|3845696_3846470_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	21.5	1.9e-09
>prophage 276
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3886888	3888328	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165236421.1|3886888_3888328_+	hypothetical protein	NA	W8CYF6	Bacillus_phage	27.7	3.8e-11
>prophage 277
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3893928	3896877	5120341		Tupanvirus(33.33%)	3	NA	NA
WP_165236431.1|3893928_3894933_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	31.7	1.4e-36
WP_165236433.1|3894958_3895825_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	57.9	4.6e-92
WP_165236435.1|3895878_3896877_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	46.6	2.8e-77
>prophage 278
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3900718	3915130	5120341		Bacillus_phage(50.0%)	16	NA	NA
WP_165236443.1|3900718_3901939_+	adenylyl-sulfate kinase	NA	A0A2K9L4R9	Tupanvirus	50.0	3.8e-36
WP_165236445.1|3902121_3903120_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_165236447.1|3903095_3904409_-	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	36.9	8.5e-66
WP_165236449.1|3904621_3905536_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_165236451.1|3905535_3906834_+	sulfate adenylyltransferase subunit CysN	NA	A0A1V0SGC3	Hokovirus	26.7	1.2e-32
WP_165236453.1|3906909_3907206_-	DUF1416 domain-containing protein	NA	NA	NA	NA	NA
WP_165236455.1|3907205_3908054_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_165236457.1|3908083_3908536_-	DUF4395 domain-containing protein	NA	NA	NA	NA	NA
WP_165236459.1|3908816_3909791_+	GDP-mannose 4,6-dehydratase	NA	M4QRT5	Synechococcus_phage	59.1	5.3e-105
WP_165236461.1|3909798_3911091_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165236463.1|3911121_3911568_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_165236465.1|3911628_3912048_+	VanZ family protein	NA	NA	NA	NA	NA
WP_165236467.1|3912060_3912435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165236469.1|3912431_3913925_-	PAS domain S-box protein	NA	W8CYF6	Bacillus_phage	28.6	6.6e-22
WP_165236471.1|3914009_3914285_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_165236473.1|3914392_3915130_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.4	5.2e-20
>prophage 279
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3936327	3946997	5120341		Bacillus_phage(25.0%)	12	NA	NA
WP_165236507.1|3936327_3937107_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	33.5	1.0e-13
WP_165236509.1|3937112_3938207_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_165236511.1|3938203_3939148_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_165236513.1|3939256_3940387_-	phosphate ABC transporter substrate-binding protein PstS	NA	Q58MA7	Prochlorococcus_phage	30.3	1.1e-18
WP_165236515.1|3940562_3941450_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_165236517.1|3941491_3942586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165236519.1|3942790_3945025_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	31.9	5.0e-74
WP_165236521.1|3945014_3945881_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165236523.1|3945877_3946096_-	cation transporter	NA	NA	NA	NA	NA
WP_165236525.1|3946092_3946386_-	metal-sensitive transcriptional regulator	NA	NA	NA	NA	NA
WP_165236527.1|3946453_3946597_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028650227.1|3946793_3946997_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	68.8	6.6e-18
>prophage 280
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3956892	3970188	5120341		Cedratvirus(20.0%)	10	NA	NA
WP_165236545.1|3956892_3957672_-	ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	28.9	2.8e-08
WP_165236547.1|3957668_3958952_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_165236549.1|3959102_3959327_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165236551.1|3959397_3961653_-	SpoIIE family protein phosphatase	NA	Q8QNA6	Ectocarpus_siliculosus_virus	28.5	3.4e-22
WP_165236553.1|3961910_3963143_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_165236555.1|3963144_3963888_+	ATP-binding cassette domain-containing protein	NA	NA	NA	NA	NA
WP_165236558.1|3963884_3966611_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	28.8	3.3e-11
WP_165239354.1|3966612_3968241_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_165236560.1|3968239_3969091_+	alpha/beta hydrolase	NA	A0A0B5A484	Mycobacterium_phage	28.2	6.4e-06
WP_165236562.1|3969084_3970188_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	A0A2K5B251	Erysipelothrix_phage	27.7	6.8e-24
>prophage 281
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3974616	3976425	5120341		Planktothrix_phage(100.0%)	1	NA	NA
WP_165236570.1|3974616_3976425_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.9	2.4e-26
>prophage 282
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3984111	3985467	5120341		Planktothrix_phage(100.0%)	1	NA	NA
WP_165236585.1|3984111_3985467_+	serine/threonine protein kinase	NA	G9BWE0	Planktothrix_phage	28.9	7.5e-17
>prophage 283
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	3999737	4001369	5120341		Catovirus(100.0%)	1	NA	NA
WP_165236607.1|3999737_4001369_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	21.8	3.8e-15
>prophage 284
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4007549	4008746	5120341		Tupanvirus(100.0%)	1	NA	NA
WP_165236621.1|4007549_4008746_-	acetoin utilization protein AcuC	NA	A0A2K9L0J7	Tupanvirus	30.4	6.7e-17
>prophage 285
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4012420	4015743	5120341		Staphylococcus_phage(66.67%)	4	NA	NA
WP_165236631.1|4012420_4013224_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	33.1	3.6e-27
WP_165239366.1|4013232_4014162_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	32.7	6.7e-33
WP_165236633.1|4014301_4015039_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_165236635.1|4015035_4015743_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	2.0e-16
>prophage 286
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4024482	4033730	5120341	protease	Enterobacteria_phage(25.0%)	9	NA	NA
WP_165239374.1|4024482_4025514_-	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	30.3	4.5e-22
WP_165236649.1|4025704_4027126_+	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_165239376.1|4027199_4028279_+	DNA integrity scanning protein DisA	NA	NA	NA	NA	NA
WP_165236651.1|4028275_4028629_-	cupin domain-containing protein	NA	A0A1V0SH58	Hokovirus	48.6	2.0e-25
WP_165236653.1|4028633_4029428_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165236655.1|4029505_4030369_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_165239378.1|4030373_4030583_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165236657.1|4030696_4033273_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A1S6UBG5	Serratia_phage	42.2	8.4e-134
WP_165236659.1|4033388_4033730_-	Lsr2 family protein	NA	A0A2H4PGG5	Streptomyces_phage	41.4	1.7e-13
>prophage 287
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4037362	4041435	5120341		Synechococcus_phage(66.67%)	5	NA	NA
WP_165236665.1|4037362_4038361_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A0E3FNQ3	Synechococcus_phage	32.3	2.8e-21
WP_165236667.1|4038369_4038915_+	HAD-IIIA family hydrolase	NA	NA	NA	NA	NA
WP_165236669.1|4038950_4039643_+	transaldolase	NA	A0A0E3FGE1	Synechococcus_phage	31.7	1.6e-15
WP_165236671.1|4039639_4040449_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_165236673.1|4040454_4041435_+	galactokinase	NA	A0A067XQL1	Caulobacter_phage	34.3	1.0e-39
>prophage 288
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4054543	4057487	5120341		Gordonia_phage(50.0%)	2	NA	NA
WP_165236695.1|4054543_4056661_+	acyltransferase	NA	A0A166XZF2	Gordonia_phage	32.8	8.9e-81
WP_165236697.1|4056674_4057487_-	FkbM family methyltransferase	NA	A0A222Z098	Streptomyces_phage	34.4	3.6e-06
>prophage 289
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4060929	4062024	5120341		Hokovirus(100.0%)	1	NA	NA
WP_165239384.1|4060929_4062024_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A1V0SG19	Hokovirus	22.1	9.1e-13
>prophage 290
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4069238	4070201	5120341		Bacillus_virus(100.0%)	1	NA	NA
WP_165236713.1|4069238_4070201_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.8	2.8e-26
>prophage 291
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4078256	4079081	5120341		Pandoravirus(100.0%)	1	NA	NA
WP_165239388.1|4078256_4079081_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	33.6	1.1e-26
>prophage 292
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4082759	4089774	5120341	tRNA,protease	Pneumococcus_phage(25.0%)	6	NA	NA
WP_165236741.1|4082759_4083374_-	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	51.0	7.0e-47
WP_165236743.1|4083370_4085482_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	A0A0P0CCN8	Ostreococcus_mediterraneus_virus	46.5	4.5e-109
WP_165236745.1|4085620_4086184_-	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	26.6	2.2e-07
WP_165236747.1|4086189_4087200_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_165239390.1|4087196_4088231_-|protease	zinc-dependent metalloprotease	protease	NA	NA	NA	NA
WP_165236749.1|4088280_4089774_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	29.4	1.8e-32
>prophage 293
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4094510	4098305	5120341	tRNA	Cedratvirus(50.0%)	3	NA	NA
WP_165236761.1|4094510_4095794_-	adenylosuccinate synthase	NA	A0A285PX35	Cedratvirus	33.5	3.2e-65
WP_165239392.1|4095835_4096747_+	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_165236763.1|4096790_4098305_+|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	36.4	5.2e-75
>prophage 294
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4109621	4126316	5120341		Vibrio_phage(16.67%)	13	NA	NA
WP_165236785.1|4109621_4112216_-	ATP-dependent chaperone ClpB	NA	A0A2I7SAX5	Vibrio_phage	35.1	3.3e-122
WP_165236787.1|4112448_4113117_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165236789.1|4113113_4113749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165236791.1|4113745_4115275_+	hybrid sensor histidine kinase/response regulator	NA	Q6XLV6	Feldmannia_irregularis_virus	30.2	7.2e-08
WP_165236793.1|4115937_4116366_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165236795.1|4116373_4117576_-	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	32.8	1.4e-14
WP_165236797.1|4117591_4118242_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_165236799.1|4118238_4120137_-	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	46.3	5.2e-133
WP_165236801.1|4120503_4121244_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_165236803.1|4121227_4122349_-	CapA family protein	NA	NA	NA	NA	NA
WP_165236805.1|4122419_4124945_+	response regulator	NA	A0A1V0SGX0	Hokovirus	32.6	3.2e-61
WP_165236807.1|4124948_4125407_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_165236809.1|4125470_4126316_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	40.6	6.1e-57
>prophage 295
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4134406	4135219	5120341		Bacillus_virus(100.0%)	1	NA	NA
WP_165236827.1|4134406_4135219_-	sugar ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.1	2.1e-14
>prophage 296
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4155862	4156495	5120341		Streptococcus_phage(100.0%)	1	NA	NA
WP_165236862.1|4155862_4156495_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	33.7	7.3e-31
>prophage 297
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4168514	4171223	5120341		Indivirus(100.0%)	1	NA	NA
WP_165236879.1|4168514_4171223_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	34.1	3.7e-100
>prophage 298
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4177212	4179504	5120341		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_165239412.1|4177212_4179504_+	DEAD/DEAH box helicase	NA	A0A1B1IUF6	uncultured_Mediterranean_phage	30.5	2.5e-12
>prophage 299
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4191655	4192768	5120341		Enterobacteria_phage(100.0%)	1	NA	NA
WP_165236923.1|4191655_4192768_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	29.2	9.2e-37
>prophage 300
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4200093	4202079	5120341		Staphylococcus_phage(100.0%)	1	NA	NA
WP_165236939.1|4200093_4202079_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	40.1	9.5e-85
>prophage 301
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4205386	4206655	5120341		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_165239420.1|4205386_4206655_+	Na+/H+ antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	42.0	3.5e-56
>prophage 302
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4222035	4225460	5120341		Mycobacterium_phage(50.0%)	3	NA	NA
WP_165239430.1|4222035_4222326_+	WhiB family transcriptional regulator	NA	A0A2P1JRB7	Mycobacterium_phage	50.0	2.4e-13
WP_165236980.1|4222847_4224998_+	penicillin-binding protein	NA	NA	NA	NA	NA
WP_165236982.1|4225001_4225460_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	36.4	5.9e-14
>prophage 303
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4232270	4237586	5120341		Bacteriophage(50.0%)	5	NA	NA
WP_165237004.1|4232270_4234382_-	DNA polymerase III subunit gamma and tau	NA	A0A1L2BWV7	Bacteriophage	33.7	2.3e-44
WP_165237006.1|4234458_4234827_-	metallopeptidase family protein	NA	NA	NA	NA	NA
WP_165239434.1|4235165_4235534_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_165237008.1|4236621_4237209_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165239436.1|4237154_4237586_-	ribonuclease HI	NA	A0A0P0BWM1	Ostreococcus_mediterraneus_virus	41.8	1.9e-22
>prophage 304
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4244194	4255385	5120341		Klebsiella_phage(66.67%)	5	NA	NA
WP_165237022.1|4244194_4248289_+	type VII secretion protein EccCa	NA	V5UPA0	Mycobacterium_phage	25.9	3.2e-103
WP_165237024.1|4248453_4248954_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_165227624.1|4249108_4249309_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165237026.1|4249443_4253622_+	S8 family serine peptidase	NA	A0A248SKY1	Klebsiella_phage	39.6	3.2e-05
WP_165237028.1|4253684_4255385_-	DUF853 family protein	NA	A0A248XCZ8	Klebsiella_phage	39.0	8.7e-63
>prophage 305
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4271571	4276287	5120341		Tupanvirus(50.0%)	2	NA	NA
WP_165237066.1|4271571_4275309_+	SpoIIE family protein phosphatase	NA	A0A2K9L0Z8	Tupanvirus	26.1	4.3e-14
WP_165239440.1|4275312_4276287_-	acyl-CoA desaturase	NA	A6N231	Microbacterium_phage	51.0	2.2e-82
>prophage 306
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4280894	4281326	5120341		Pandoravirus(100.0%)	1	NA	NA
WP_165239442.1|4280894_4281326_-	nucleoside deaminase	NA	S4VYZ2	Pandoravirus	52.3	6.7e-12
>prophage 307
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4289143	4290622	5120341		Mycobacterium_phage(100.0%)	1	NA	NA
WP_165237096.1|4289143_4290622_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	27.7	2.8e-25
>prophage 308
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4300588	4301284	5120341		Vibrio_phage(100.0%)	1	NA	NA
WP_165237112.1|4300588_4301284_-	NAD-dependent deacylase	NA	A0A2I7S9Y2	Vibrio_phage	37.3	3.3e-24
>prophage 309
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4314649	4319829	5120341		Brevibacillus_phage(50.0%)	2	NA	NA
WP_165239448.1|4314649_4316506_-	exodeoxyribonuclease V subunit alpha	NA	A0A0K2FLP8	Brevibacillus_phage	24.5	8.5e-19
WP_165237136.1|4316445_4319829_-	UvrD-helicase domain-containing protein	NA	E3T5J8	Cafeteria_roenbergensis_virus	23.1	2.5e-08
>prophage 310
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4328577	4329744	5120341		Enterobacteria_phage(100.0%)	1	NA	NA
WP_165237148.1|4328577_4329744_-	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	36.7	3.3e-45
>prophage 311
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4369184	4372127	5120341	tRNA	Tupanvirus(50.0%)	2	NA	NA
WP_165237214.1|4369184_4370471_-|tRNA	serine--tRNA ligase	tRNA	A0A2K9L088	Tupanvirus	33.9	3.1e-60
WP_165239464.1|4370600_4372127_+	YegS/Rv2252/BmrU family lipid kinase	NA	A0A1V0SBJ0	Catovirus	23.6	2.3e-06
>prophage 312
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4376945	4379437	5120341		Tupanvirus(100.0%)	2	NA	NA
WP_165237222.1|4376945_4378181_+	class I SAM-dependent methyltransferase	NA	A0A2K9L0U7	Tupanvirus	29.5	1.2e-32
WP_165237224.1|4378177_4379437_+	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	34.0	2.2e-34
>prophage 313
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4384985	4386620	5120341		Streptococcus_phage(100.0%)	1	NA	NA
WP_165237238.1|4384985_4386620_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A1B0RXA0	Streptococcus_phage	25.1	1.7e-26
>prophage 314
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4403010	4403733	5120341		Planktothrix_phage(100.0%)	1	NA	NA
WP_165237258.1|4403010_4403733_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.3	9.5e-35
>prophage 315
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4414757	4417057	5120341		Staphylococcus_phage(50.0%)	3	NA	NA
WP_165237282.1|4414757_4415471_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.5	1.3e-12
WP_165239473.1|4415543_4416311_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_165239475.1|4416340_4417057_-	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	41.6	1.6e-05
>prophage 316
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4425559	4426339	5120341		Staphylococcus_phage(100.0%)	1	NA	NA
WP_165237298.1|4425559_4426339_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	24.0	1.8e-10
>prophage 317
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4441620	4443105	5120341		Pandoravirus(100.0%)	1	NA	NA
WP_165237327.1|4441620_4443105_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A0B5J2K3	Pandoravirus	50.9	3.3e-05
>prophage 318
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4448193	4449300	5120341		Yellowstone_lake_mimivirus(100.0%)	1	NA	NA
WP_165237337.1|4448193_4449300_+	alanine racemase	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	29.6	2.2e-30
>prophage 319
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4454972	4455722	5120341		Klosneuvirus(100.0%)	1	NA	NA
WP_165237349.1|4454972_4455722_-	amino acid ABC transporter ATP-binding protein	NA	A0A1V0SJ29	Klosneuvirus	26.5	1.3e-05
>prophage 320
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4461462	4462809	5120341		Pandoravirus(100.0%)	1	NA	NA
WP_165239487.1|4461462_4462809_-	beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	35.6	1.8e-71
>prophage 321
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4490332	4495219	5120341		Catovirus(50.0%)	4	NA	NA
WP_165237403.1|4490332_4492021_-	DEAD/DEAH box helicase	NA	A0A1V0SBR7	Catovirus	34.9	1.7e-58
WP_165237405.1|4492049_4492901_+	phosphotransferase	NA	NA	NA	NA	NA
WP_165237407.1|4492904_4493375_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165237409.1|4493395_4495219_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	35.3	2.1e-86
>prophage 322
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4509257	4511189	5120341		Klosneuvirus(100.0%)	1	NA	NA
WP_165237437.1|4509257_4511189_-	Zn-dependent oligopeptidase	NA	A0A1V0SIU1	Klosneuvirus	19.0	1.1e-26
>prophage 323
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4516057	4517155	5120341		Streptococcus_phage(100.0%)	1	NA	NA
WP_165237451.1|4516057_4517155_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	33.2	9.7e-23
>prophage 324
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4543284	4544652	5120341		Streptococcus_phage(100.0%)	1	NA	NA
WP_165239506.1|4543284_4544652_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	41.5	2.7e-91
>prophage 325
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4547866	4548280	5120341		Staphylococcus_phage(100.0%)	1	NA	NA
WP_165237505.1|4547866_4548280_-	arsenate reductase ArsC	NA	A0A2H4PQT9	Staphylococcus_phage	40.5	5.1e-17
>prophage 326
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4552585	4554458	5120341		Arthrobacter_phage(50.0%)	3	NA	NA
WP_165237517.1|4552585_4553167_-	single-stranded DNA-binding protein	NA	A0A222ZFS3	Arthrobacter_phage	63.9	4.5e-51
WP_165237519.1|4553287_4553575_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_165237521.1|4553777_4554458_+	serine/threonine protein kinase	NA	A0A1B1IUU3	uncultured_Mediterranean_phage	34.4	1.9e-13
>prophage 327
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4572672	4573761	5120341		Stenotrophomonas_phage(100.0%)	1	NA	NA
WP_165237549.1|4572672_4573761_+	inositol-3-phosphate synthase	NA	A0A0H4IPK5	Stenotrophomonas_phage	42.0	8.3e-75
>prophage 328
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4577453	4578983	5120341	tRNA	Mycobacterium_phage(100.0%)	1	NA	NA
WP_165237555.1|4577453_4578983_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A249XS88	Mycobacterium_phage	35.2	3.5e-55
>prophage 329
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4586552	4592860	5120341		Orpheovirus(25.0%)	7	NA	NA
WP_165237565.1|4586552_4587599_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	51.0	8.5e-77
WP_165239516.1|4587755_4588076_+	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	47.0	2.6e-21
WP_165237567.1|4588090_4588741_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_165237569.1|4588834_4590151_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_165237571.1|4590150_4590909_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_165237573.1|4590962_4591982_-	ParB/RepB/Spo0J family partition protein	NA	S5VSZ7	Leptospira_phage	36.0	1.6e-11
WP_165237575.1|4591978_4592860_-	ParA family protein	NA	Q8JL10	Natrialba_phage	32.1	2.7e-23
>prophage 330
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4598832	4607858	5120341		Arthrobacter_phage(25.0%)	6	NA	NA
WP_165237585.1|4598832_4599978_+	DNA polymerase III subunit beta	NA	A0A0A7HEW5	Arthrobacter_phage	35.0	2.6e-50
WP_165237587.1|4600037_4601054_+	decarboxylating 6-phosphogluconate dehydrogenase	NA	M4QGJ9	Cyanophage	42.6	2.6e-62
WP_165237589.1|4601064_4602228_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_165237592.1|4602211_4602757_+	DUF721 domain-containing protein	NA	NA	NA	NA	NA
WP_165239523.1|4603075_4605088_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	41.6	1.0e-126
WP_165237594.1|4605149_4607858_+	DNA gyrase subunit A	NA	A0A172JHV7	Bacillus_phage	28.4	2.6e-85
>prophage 331
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4616848	4623158	5120341	protease	Marseillevirus(66.67%)	6	NA	NA
WP_165237612.1|4616848_4617364_+	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	42.2	5.6e-21
WP_165239531.1|4617485_4618307_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_165237614.1|4618515_4618995_-	cell division protein CrgA	NA	NA	NA	NA	NA
WP_165239533.1|4619091_4619814_+	DUF881 domain-containing protein	NA	NA	NA	NA	NA
WP_165239535.1|4619820_4621575_-	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	A0A2R3ZRI5	Marseillevirus	32.7	2.7e-19
WP_165239537.1|4621646_4623158_-	serine/threonine protein kinase	NA	D2XAD0	Marseillevirus	29.0	7.1e-16
>prophage 332
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4635354	4635834	5120341		Molluscum_contagiosum_virus(100.0%)	1	NA	NA
WP_165239543.1|4635354_4635834_-	glutathione peroxidase	NA	A0A1S7DM81	Molluscum_contagiosum_virus	37.7	1.6e-14
>prophage 333
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4641020	4644820	5120341		Anomala_cuprea_entomopoxvirus(50.0%)	4	NA	NA
WP_165237646.1|4641020_4642013_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	25.1	1.7e-18
WP_165237648.1|4642009_4642783_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_165239548.1|4642779_4643346_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165239550.1|4643380_4644820_-	alkane 1-monooxygenase	NA	A0A1V0SBK9	Catovirus	32.7	6.1e-49
>prophage 334
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4666919	4669699	5120341	holin	Klosneuvirus(50.0%)	2	NA	NA
WP_165237686.1|4666919_4668626_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	30.4	3.9e-55
WP_165237688.1|4668622_4669699_+|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	36.6	1.2e-28
>prophage 335
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4672880	4674491	5120341		Vibrio_phage(100.0%)	1	NA	NA
WP_165237690.1|4672880_4674491_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	27.1	9.3e-22
>prophage 336
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4686035	4688015	5120341		Klosneuvirus(100.0%)	1	NA	NA
WP_165237714.1|4686035_4688015_+	peptidase M13	NA	A0A1V0SHG2	Klosneuvirus	28.4	7.7e-87
>prophage 337
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4692241	4704028	5120341		Diadromus_pulchellus_ascovirus(20.0%)	11	NA	NA
WP_165237728.1|4692241_4694347_+	DEAD/DEAH box helicase	NA	Q9DSV4	Diadromus_pulchellus_ascovirus	32.5	4.0e-33
WP_165239568.1|4694462_4695302_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_165237730.1|4695336_4696410_+	dihydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_165237732.1|4696387_4696879_-	glutathione peroxidase	NA	A0A1S7DLQ4	Molluscum_contagiosum_virus	35.5	3.8e-11
WP_165237734.1|4696932_4699647_+	DEAD/DEAH box helicase	NA	A0A160DHD3	Gordonia_phage	26.9	5.7e-40
WP_165237736.1|4699643_4700309_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165237738.1|4700296_4701037_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165237740.1|4701029_4701590_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165237742.1|4701633_4702017_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	39.8	2.3e-11
WP_165237744.1|4702054_4702444_-	VOC family protein	NA	NA	NA	NA	NA
WP_165237746.1|4702486_4704028_+	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	48.5	3.1e-19
>prophage 338
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4724867	4725530	5120341		Enterococcus_phage(100.0%)	1	NA	NA
WP_165239577.1|4724867_4725530_-	nickel pincer cofactor biosynthesis protein LarB	NA	A0A096XTB6	Enterococcus_phage	44.8	1.8e-19
>prophage 339
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4743012	4748629	5120341		Acinetobacter_phage(25.0%)	5	NA	NA
WP_165237821.1|4743012_4743576_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	40.3	9.4e-30
WP_165237823.1|4743572_4744868_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	44.8	8.7e-47
WP_165237825.1|4744885_4746346_+	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	36.9	2.7e-73
WP_165239583.1|4746353_4747706_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_165237827.1|4747786_4748629_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.8	7.4e-31
>prophage 340
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4774838	4775753	5120341		Indivirus(100.0%)	1	NA	NA
WP_165237867.1|4774838_4775753_+	cation transporter	NA	A0A1V0SED0	Indivirus	29.6	1.5e-05
>prophage 341
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4779037	4781059	5120341		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_165239592.1|4779037_4781059_-	glycosyltransferase	NA	M1HZF6	Acanthocystis_turfacea_Chlorella_virus	30.8	4.6e-18
>prophage 342
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4786213	4787554	5120341		Pandoravirus(100.0%)	1	NA	NA
WP_165237884.1|4786213_4787554_+	serine/threonine protein kinase	NA	A0A291AU40	Pandoravirus	32.3	1.0e-18
>prophage 343
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4793832	4795308	5120341		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_165237900.1|4793832_4795308_+	serine/threonine protein kinase	NA	M1HTX6	Paramecium_bursaria_Chlorella_virus	26.9	1.9e-13
>prophage 344
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4800353	4801178	5120341		Gordonia_phage(100.0%)	1	NA	NA
WP_165239598.1|4800353_4801178_-	SGNH/GDSL hydrolase family protein	NA	A0A160DD06	Gordonia_phage	34.1	2.1e-22
>prophage 345
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4827689	4829324	5120341		Streptococcus_phage(100.0%)	1	NA	NA
WP_165237956.1|4827689_4829324_-	alpha-D-glucose phosphate-specific phosphoglucomutase	NA	A0A1X9I671	Streptococcus_phage	24.5	2.2e-15
>prophage 346
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4846371	4846962	5120341		Saccharomonospora_phage(100.0%)	1	NA	NA
WP_165237999.1|4846371_4846962_+	dCTP deaminase	NA	I4AZP2	Saccharomonospora_phage	64.0	5.7e-70
>prophage 347
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4882080	4883625	5120341		Catovirus(100.0%)	1	NA	NA
WP_165238044.1|4882080_4883625_+	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	39.0	2.5e-69
>prophage 348
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4911908	4917679	5120341		Mollivirus(33.33%)	6	NA	NA
WP_165238095.1|4911908_4912718_-	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	28.9	1.2e-09
WP_165238097.1|4912729_4913416_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165239626.1|4913465_4914788_+	NAD(P)-binding domain-containing protein	NA	A0A2H4J2Q2	uncultured_Caudovirales_phage	39.3	1.7e-05
WP_165238099.1|4914784_4915360_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165239628.1|4915452_4916271_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_165239630.1|4916341_4917679_+	cytochrome P450	NA	V5UQK0	Mycobacterium_phage	25.7	7.4e-17
>prophage 349
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4928914	4934470	5120341		Bodo_saltans_virus(50.0%)	5	NA	NA
WP_165238127.1|4928914_4930258_-	deoxyribodipyrimidine photo-lyase	NA	A0A2H4UV63	Bodo_saltans_virus	28.7	1.8e-47
WP_165238129.1|4930275_4931064_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_165238131.1|4931068_4931971_-	pseudouridine-5'-phosphate glycosidase	NA	NA	NA	NA	NA
WP_165238133.1|4931967_4932831_-	carbohydrate kinase	NA	NA	NA	NA	NA
WP_165238135.1|4932886_4934470_+	RecQ family ATP-dependent DNA helicase	NA	F2NZ48	Diadromus_pulchellus_ascovirus	38.9	1.0e-49
>prophage 350
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4951704	4957472	5120341		Bacillus_virus(33.33%)	4	NA	NA
WP_165238177.1|4951704_4952643_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.0	1.3e-23
WP_165239640.1|4952697_4953720_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_165238179.1|4954043_4955375_+	C40 family peptidase	NA	A0A2L1IW19	Streptomyces_phage	45.6	5.1e-18
WP_165238181.1|4955438_4957472_+	acyl-CoA oxidase	NA	A0A2K9L4A3	Tupanvirus	29.6	1.8e-62
>prophage 351
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4963472	4966368	5120341		Mollivirus(50.0%)	3	NA	NA
WP_165238191.1|4963472_4964378_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	37.2	1.4e-43
WP_165238193.1|4964377_4964794_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_165238195.1|4964790_4966368_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	29.3	3.3e-24
>prophage 352
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4972024	4977325	5120341		Mycobacterium_phage(50.0%)	4	NA	NA
WP_165238217.1|4972024_4973497_-	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	35.3	2.5e-50
WP_165238219.1|4973619_4974168_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_165238221.1|4974194_4975013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165239642.1|4975075_4977325_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	62.9	2.3e-265
>prophage 353
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4980711	4982757	5120341		Brazilian_cedratvirus(50.0%)	2	NA	NA
WP_165238231.1|4980711_4981725_-	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	33.8	1.6e-19
WP_165239646.1|4981806_4982757_+	YafY family transcriptional regulator	NA	A0A1B0RXM1	Streptococcus_phage	24.9	4.6e-05
>prophage 354
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4989408	4994518	5120341		Enterococcus_phage(25.0%)	4	NA	NA
WP_165238244.1|4989408_4989936_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	39.0	1.1e-21
WP_165238246.1|4989932_4991756_-	HAMP domain-containing histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	27.1	9.5e-15
WP_165238248.1|4991903_4993466_+	amidophosphoribosyltransferase	NA	A0A1B1ISH6	uncultured_Mediterranean_phage	29.7	3.7e-44
WP_165238250.1|4993462_4994518_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	35.0	3.6e-51
>prophage 355
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	4999519	5000509	5120341		Acanthocystis_turfacea_Chlorella_virus(100.0%)	1	NA	NA
WP_165238260.1|4999519_5000509_-	serine/threonine protein kinase	NA	M1HZT4	Acanthocystis_turfacea_Chlorella_virus	33.5	4.7e-16
>prophage 356
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	5005149	5005959	5120341		Bacillus_phage(100.0%)	1	NA	NA
WP_165238270.1|5005149_5005959_+	formamidopyrimidine-DNA glycosylase	NA	A0A127AWE5	Bacillus_phage	23.9	2.2e-08
>prophage 357
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	5026599	5027667	5120341		Planktothrix_phage(100.0%)	1	NA	NA
WP_165238302.1|5026599_5027667_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.4	3.4e-20
>prophage 358
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	5040931	5042725	5120341		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_165238321.1|5040931_5042725_+	hypothetical protein	NA	A0A1B1IRH5	uncultured_Mediterranean_phage	30.2	2.6e-09
>prophage 359
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	5093782	5094754	5120341		Planktothrix_phage(100.0%)	1	NA	NA
WP_165238402.1|5093782_5094754_+	sulfate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.9	9.8e-27
>prophage 360
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	5102960	5108947	5120341		Cedratvirus(50.0%)	5	NA	NA
WP_165238416.1|5102960_5104493_+	sugar ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	27.0	5.2e-06
WP_165238418.1|5104489_5105464_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165238420.1|5105460_5106465_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_165238422.1|5106461_5107316_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_165238424.1|5107315_5108947_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	24.0	8.5e-15
>prophage 361
NZ_CP049257	Nocardioides sp. R-3366 chromosome, complete genome	5120341	5114077	5115064	5120341		Moumouvirus(100.0%)	1	NA	NA
WP_165238438.1|5114077_5115064_-	alpha/beta hydrolase	NA	A0A2P1EM31	Moumouvirus	38.6	2.2e-58
