The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP049250	Rhizobium rhizoryzae strain DSM 29514 chromosome, complete genome	3375736	2780724	2794095	3375736	tRNA	uncultured_Mediterranean_phage(70.0%)	13	NA	NA
WP_062554634.1|2780724_2783292_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	49.4	1.2e-63
WP_062554635.1|2783364_2783715_-	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_165136122.1|2783913_2784786_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_165136125.1|2784849_2786439_-	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV24	Clostridium_phage	32.0	5.4e-14
WP_156379165.1|2786609_2787263_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1J0MC37	Streptomyces_phage	36.4	1.7e-11
WP_165136128.1|2787259_2788027_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	37.9	1.2e-38
WP_165136131.1|2788030_2789314_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	46.2	1.8e-97
WP_062554641.1|2789411_2790242_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	40.4	9.9e-44
WP_165136134.1|2790238_2791144_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_062554642.1|2791186_2791396_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	61.7	6.3e-08
WP_165136137.1|2791437_2792550_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	32.3	4.7e-09
WP_165136140.1|2792579_2793293_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	44.6	1.1e-38
WP_165137205.1|2793279_2794095_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	34.4	4.1e-34
>prophage 2
NZ_CP049250	Rhizobium rhizoryzae strain DSM 29514 chromosome, complete genome	3375736	3205355	3216828	3375736	tail,head,protease,capsid	Paracoccus_phage(28.57%)	13	NA	NA
WP_165136619.1|3205355_3209168_-	hypothetical protein	NA	A0A0K1LL82	Rhodobacter_phage	38.5	3.9e-212
WP_062552820.1|3209527_3209962_-	peptidase P60	NA	F4YXU4	Roseobacter_phage	43.0	2.4e-25
WP_165136622.1|3209958_3210834_-	DUF2163 domain-containing protein	NA	A0A0B5A5B8	Paracoccus_phage	42.2	9.1e-56
WP_165136625.1|3210830_3211469_-	DUF2460 domain-containing protein	NA	A0A0B5A2K3	Paracoccus_phage	47.6	5.1e-48
WP_165136628.1|3211719_3212298_-|tail	phage tail tape measure protein	tail	A5LH38	Enterobacteria_phage	40.2	8.8e-07
WP_165136631.1|3212306_3212537_-|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_165136634.1|3212533_3212929_-	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_165136638.1|3212928_3213336_-|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_062552826.1|3213378_3213786_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_062552827.1|3213782_3214121_-|head	phage head closure protein	head	NA	NA	NA	NA
WP_165136641.1|3214122_3214692_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165136644.1|3214966_3216250_-|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	44.2	6.3e-82
WP_165136647.1|3216255_3216828_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JAI0	uncultured_Caudovirales_phage	45.4	1.6e-29
>prophage 1
NZ_CP049247	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed1, complete sequence	54249	2878	48520	54249	portal,tail,terminase,capsid,plate,head	Aurantimonas_phage(34.29%)	57	NA	NA
WP_165130319.1|2878_4165_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	G9E4Q1	Emiliania_huxleyi_virus	29.3	7.9e-40
WP_165130320.1|4631_4871_+	hypothetical protein	NA	A0A076G7I4	Sinorhizobium_phage	48.9	4.7e-07
WP_165130321.1|5063_5747_+	ParA family protein	NA	A0A0A8IL09	Aurantimonas_phage	39.9	2.0e-34
WP_165130322.1|5743_6094_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165130323.1|6306_6507_+	hypothetical protein	NA	A0A291AUQ4	Sinorhizobium_phage	59.6	1.1e-09
WP_165130324.1|6861_7572_+	SOS response-associated peptidase	NA	A0A291AUP1	Sinorhizobium_phage	43.3	3.2e-43
WP_165130325.1|7583_7820_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165130326.1|7905_8742_-	DNA adenine methylase	NA	A0A291AUP9	Sinorhizobium_phage	77.5	1.3e-123
WP_165130327.1|9008_9263_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165130328.1|9253_9583_+	BrnA antitoxin family protein	NA	NA	NA	NA	NA
WP_165130329.1|9626_9953_-	hypothetical protein	NA	A0A291AUN9	Sinorhizobium_phage	55.2	1.3e-28
WP_165130330.1|10236_10656_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130331.1|10655_11240_-	lysozyme	NA	L7TM06	Rhizobium_phage	45.9	8.2e-37
WP_165130332.1|11226_11442_-	hypothetical protein	NA	L7TNZ5	Rhizobium_phage	46.2	4.0e-05
WP_165130333.1|11544_12492_+	DUF4214 domain-containing protein	NA	NA	NA	NA	NA
WP_165130334.1|12599_13634_-	late control D family protein	NA	A0A0A8ILC1	Aurantimonas_phage	43.7	4.1e-71
WP_165130335.1|13636_13861_-|tail	phage tail protein	tail	A0A0A8IL62	Aurantimonas_phage	38.6	6.4e-06
WP_165130336.1|13860_14304_-|tail	phage tail protein	tail	A0A0A8IL04	Aurantimonas_phage	44.8	1.2e-27
WP_165130337.1|14338_16471_-|tail	phage tail tape measure protein	tail	A0A068C997	Rhizobium_phage	37.2	6.9e-65
WP_165130338.1|16475_16853_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130339.1|16904_17414_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130340.1|17475_18711_-|tail	phage tail protein	tail	A0A0A8IL59	Aurantimonas_phage	56.4	8.7e-121
WP_165130341.1|18812_19037_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130342.1|19186_19654_-	hypothetical protein	NA	A0A1Y0SVH3	Sinorhizobium_phage	34.6	4.4e-09
WP_165130343.1|19650_20637_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130344.1|20636_21371_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130345.1|21339_21540_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130346.1|21549_23838_-	hypothetical protein	NA	A0A0A8ILB4	Aurantimonas_phage	37.5	2.0e-131
WP_165130347.1|23834_24494_-|tail	phage tail protein I	tail	A0A0A8IL57	Aurantimonas_phage	35.5	1.0e-27
WP_165130348.1|24735_25680_-|plate	baseplate assembly protein	plate	A0A0A8IKZ9	Aurantimonas_phage	55.7	4.5e-85
WP_165130349.1|25676_26066_-	hypothetical protein	NA	A0A0A8IN57	Aurantimonas_phage	49.2	2.2e-25
WP_165130350.1|26052_26247_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130351.1|26276_26798_-|plate	baseplate assembly protein	plate	A0A0A8IL55	Aurantimonas_phage	62.7	3.8e-41
WP_165130354.1|26787_27576_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130356.1|27579_27963_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130358.1|27969_28449_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130360.1|28562_29570_-|capsid	major capsid protein	capsid	A0A2H4J890	uncultured_Caudovirales_phage	40.7	1.0e-55
WP_165130362.1|29583_29967_-|head	head decoration protein	head	A0A0A8IL52	Aurantimonas_phage	40.6	1.5e-10
WP_165130364.1|29970_30555_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130366.1|30559_31480_-	S49 family peptidase	NA	A0A068CE01	Rhizobium_phage	61.2	5.5e-104
WP_165130368.1|31489_31759_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130370.1|31765_33400_-|portal	phage portal protein	portal	R9TN54	Rhizobium_phage	71.2	2.3e-225
WP_165130372.1|33396_35364_-|terminase	terminase	terminase	A0A291AUK9	Sinorhizobium_phage	46.3	5.6e-170
WP_165130374.1|35365_36019_-	hypothetical protein	NA	A0A291AUL0	Sinorhizobium_phage	33.6	1.2e-17
WP_165130419.1|36240_36852_-	hypothetical protein	NA	A0A0A8IL87	Aurantimonas_phage	49.5	2.5e-44
WP_165130376.1|37058_37826_-	hypothetical protein	NA	R9TRT9	Rhizobium_phage	41.1	7.0e-52
WP_165130378.1|38141_39941_-	DNA primase	NA	G8DGC0	Emiliania_huxleyi_virus	32.5	7.6e-57
WP_165130380.1|39942_41301_-	P4 alpha zinc-binding domain-containing protein	NA	R9TNC4	Rhizobium_phage	47.3	2.4e-95
WP_165130382.1|41515_42061_-	3'-5' exoribonuclease	NA	A0A2I7R2S7	Vibrio_phage	38.7	4.5e-29
WP_165130384.1|42060_42399_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130386.1|43568_45014_-	hypothetical protein	NA	A0A291AUK6	Sinorhizobium_phage	52.2	2.7e-129
WP_165130388.1|45010_45220_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130390.1|45216_45732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130392.1|45728_46151_-	hypothetical protein	NA	R9TNB9	Rhizobium_phage	32.1	4.9e-07
WP_165130394.1|46150_46348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165130404.1|46585_47080_-	hypothetical protein	NA	A0A291AUJ7	Sinorhizobium_phage	46.0	8.8e-32
WP_165130421.1|47833_48520_+	helix-turn-helix domain-containing protein	NA	R9TRS6	Rhizobium_phage	55.0	3.6e-68
>prophage 1
NZ_CP049252	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed5, complete sequence	40977	0	21342	40977	protease,capsid,head,terminase,portal	Sinorhizobium_phage(41.67%)	23	NA	NA
WP_165137681.1|4068_4293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165137684.1|4436_4895_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165137687.1|4977_5280_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165137690.1|5282_6473_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165137692.1|6571_7051_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165137694.1|7053_7635_-	hypothetical protein	NA	B0VK42	Azospirillum_phage	34.6	5.3e-12
WP_165137696.1|7634_7961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165137698.1|7957_8551_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165137675.1|8554_9064_-	hypothetical protein	NA	A0A0U2BXC8	Paracoccus_phage	52.5	1.1e-05
WP_165137700.1|9125_10412_-|capsid	phage major capsid protein	capsid	A0A2H4JD98	uncultured_Caudovirales_phage	55.2	7.5e-107
WP_165137702.1|10431_11097_-|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	52.9	3.5e-60
WP_165137789.1|11093_12215_-|portal	phage portal protein	portal	A0A0U2BXP2	Paracoccus_phage	56.6	1.1e-111
WP_165137704.1|12334_14167_-|terminase	terminase large subunit	terminase	A0A0U2C138	Paracoccus_phage	49.2	9.2e-143
WP_165137706.1|14126_14588_-|terminase	P27 family phage terminase small subunit	terminase	NA	NA	NA	NA
WP_165137708.1|15258_15894_-	hypothetical protein	NA	A0A068C9G5	Rhizobium_phage	38.9	2.7e-25
WP_165137710.1|15883_17104_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_165137713.1|17137_17416_-	hypothetical protein	NA	A0A291AUT2	Sinorhizobium_phage	40.4	2.7e-06
WP_165137716.1|17412_17964_-	hypothetical protein	NA	A0A291AUS3	Sinorhizobium_phage	36.4	3.3e-19
WP_165137719.1|17960_18620_-	hypothetical protein	NA	A0A291AUT5	Sinorhizobium_phage	79.0	3.0e-104
WP_165137722.1|18603_20034_-	hypothetical protein	NA	A0A291AUK6	Sinorhizobium_phage	54.4	3.3e-132
WP_165137725.1|20030_20510_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_165137728.1|20590_20839_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165137731.1|20841_21342_-	hypothetical protein	NA	A0A291AUS4	Sinorhizobium_phage	35.4	4.0e-16
>prophage 2
NZ_CP049252	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed5, complete sequence	40977	24496	39422	40977	integrase	Sinorhizobium_phage(22.22%)	16	22374:22387	27543:27556
22374:22387	attL	GCCAATATTTCCGC	NA	NA	NA	NA
WP_165137746.1|24496_25465_+	3'-5' exoribonuclease	NA	A0A2I7R2S7	Vibrio_phage	38.7	6.1e-29
WP_165137749.1|25465_25756_+	hypothetical protein	NA	A0A068CE33	Rhizobium_phage	55.4	8.0e-17
WP_165137752.1|25752_26616_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A067XRF8	Caulobacter_phage	43.2	4.6e-60
WP_165137755.1|27061_27766_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
27543:27556	attR	GCCAATATTTCCGC	NA	NA	NA	NA
WP_165137758.1|28100_28736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165137761.1|29378_30044_+	ParA family protein	NA	A0A0A8IL09	Aurantimonas_phage	45.0	2.2e-38
WP_165137764.1|30040_30325_+	chromosome partitioning protein ParB	NA	NA	NA	NA	NA
WP_165137767.1|31018_31339_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165137770.1|31322_31775_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165137773.1|31913_32129_-	hypothetical protein	NA	A0A291AUV7	Sinorhizobium_phage	44.3	1.1e-12
WP_165137776.1|32130_33114_-	glycoside hydrolase family 19 protein	NA	A0A291AUV5	Sinorhizobium_phage	55.8	5.9e-88
WP_165137779.1|33300_34968_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165137781.1|34964_35738_-	hypothetical protein	NA	G0YQF8	Erwinia_phage	38.2	8.4e-05
WP_165137783.1|35737_36592_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165137678.1|36595_37861_-	hypothetical protein	NA	A0A2P0VMV2	Tetraselmis_virus	29.3	6.6e-07
WP_165137785.1|37862_39422_-	hypothetical protein	NA	F8TV92	EBPR_siphovirus	38.0	5.5e-88
