assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011064805.1_ASM1106480v1	NZ_CP025982	Enterobacteriaceae bacterium A-F18 chromosome, complete genome	1	521582-521854	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		csa3,DinG,RT,DEDDh,cas3,WYL	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29	0	0	NA	NA	I-E:I-E:I-E	3,4,4	4	Orphan	csa3,DinG,RT,DEDDh,cas3,WYL	NA,NA	NA|747aa|up_9|NZ_CP025982.1_507422_509663_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|264aa|up_8|NZ_CP025982.1_509731_510523_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_7|NZ_CP025982.1_510746_512384_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_6|NZ_CP025982.1_512462_513761_+	PRK00077, eno, enolase; Provisional	NA|370aa|up_5|NZ_CP025982.1_513827_514937_-	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs	NA|224aa|up_4|NZ_CP025982.1_515354_516026_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|121aa|up_3|NZ_CP025982.1_516366_516729_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|603aa|up_2|NZ_CP025982.1_517049_518858_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_1|NZ_CP025982.1_518857_520570_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_0|NZ_CP025982.1_520633_521368_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|92aa|down_0|NZ_CP025982.1_521965_522241_+	pfam17274, DUF5339, Family of unknown function (DUF5339)	NA|348aa|down_1|NZ_CP025982.1_522289_523333_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|472aa|down_2|NZ_CP025982.1_523568_524984_+	PRK10637, cysG, siroheme synthase CysG	NA|303aa|down_3|NZ_CP025982.1_524993_525902_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_4|NZ_CP025982.1_525911_527339_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_5|NZ_CP025982.1_527338_527944_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_6|NZ_CP025982.1_528015_528339_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|107aa|down_7|NZ_CP025982.1_528513_528834_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|231aa|down_8|NZ_CP025982.1_528853_529546_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_9|NZ_CP025982.1_529563_530043_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed
GCF_011064805.1_ASM1106480v1	NZ_CP025982	Enterobacteriaceae bacterium A-F18 chromosome, complete genome	2	1725445-1725573	2	CRISPRCasFinder	no	DEDDh	csa3,DinG,RT,DEDDh,cas3,WYL	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,RT,DEDDh,cas3,WYL	NA,NA|95aa|down_0|NZ_CP025982.1_1726411_1726696_-,NA|30aa|down_8|NZ_CP025982.1_1735205_1735295_+	NA|123aa|up_9|NZ_CP025982.1_1714021_1714390_+	PRK09504, sufA, iron-sulfur cluster assembly scaffold protein; Provisional	NA|495aa|up_8|NZ_CP025982.1_1714398_1715883_+	PRK11814, PRK11814, cysteine desulfurase activator complex subunit SufB; Provisional	NA|424aa|up_7|NZ_CP025982.1_1716619_1717891_+	PRK10948, PRK10948, Fe-S cluster assembly protein SufD	NA|407aa|up_6|NZ_CP025982.1_1717887_1719108_+	PRK09295, PRK09295, cysteine desulfurase SufS	NA|139aa|up_5|NZ_CP025982.1_1719121_1719538_+	PRK09296, PRK09296, cysteine desulfuration protein SufE	NA|339aa|up_4|NZ_CP025982.1_1719633_1720650_+	PRK10190, PRK10190, L,D-transpeptidase; Provisional	NA|79aa|up_3|NZ_CP025982.1_1720720_1720957_-	PRK15396, PRK15396, major outer membrane lipoprotein	NA|471aa|up_2|NZ_CP025982.1_1721265_1722678_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|264aa|up_1|NZ_CP025982.1_1723174_1723966_-	cd01641, Bacterial_IMPase_like_1, Predominantly bacterial family of Mg++ dependend phosphatases, related to inositol monophosphatases	NA|352aa|up_0|NZ_CP025982.1_1724277_1725333_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|95aa|down_0|NZ_CP025982.1_1726411_1726696_-	NA	NA|458aa|down_1|NZ_CP025982.1_1726814_1728188_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|203aa|down_2|NZ_CP025982.1_1728673_1729282_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|214aa|down_3|NZ_CP025982.1_1729410_1730052_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_4|NZ_CP025982.1_1730190_1731339_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|400aa|down_5|NZ_CP025982.1_1731640_1732840_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|304aa|down_6|NZ_CP025982.1_1732953_1733865_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_7|NZ_CP025982.1_1733881_1734907_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_8|NZ_CP025982.1_1735205_1735295_+	NA	NA|390aa|down_9|NZ_CP025982.1_1735461_1736631_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]
GCF_011064805.1_ASM1106480v1	NZ_CP025982	Enterobacteriaceae bacterium A-F18 chromosome, complete genome	3	4086099-4086240	3	CRISPRCasFinder	no		csa3,DinG,RT,DEDDh,cas3,WYL	Orphan	TTAGTGTCTGCACCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCA	47	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,RT,DEDDh,cas3,WYL	NA,NA	NA|505aa|up_9|NZ_CP025982.1_4071467_4072982_-	PRK04926, dgt, deoxyguanosinetriphosphate triphosphohydrolase; Provisional	NA|233aa|up_8|NZ_CP025982.1_4073090_4073789_+	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA|267aa|up_7|NZ_CP025982.1_4073781_4074582_+	PRK03379, PRK03379, vitamin B12-transporter protein BtuF; Provisional	NA|208aa|up_6|NZ_CP025982.1_4074596_4075220_+	PRK10578, PRK10578, hypothetical protein; Provisional	NA|115aa|up_5|NZ_CP025982.1_4075268_4075613_-	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional	NA|427aa|up_4|NZ_CP025982.1_4075806_4077087_+	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase	NA|661aa|up_3|NZ_CP025982.1_4077236_4079219_-	PRK10577, PRK10577, Fe(3+)-hydroxamate ABC transporter permease FhuB	NA|297aa|up_2|NZ_CP025982.1_4079215_4080106_-	PRK10576, PRK10576, Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD	NA|266aa|up_1|NZ_CP025982.1_4080105_4080903_-	PRK10575, PRK10575, Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC	NA|846aa|up_0|NZ_CP025982.1_4083449_4085987_-	PRK09506, mrcB, bifunctional glycosyl transferase/transpeptidase; Reviewed	NA|810aa|down_0|NZ_CP025982.1_4086260_4088690_-	PRK11664, PRK11664, ATP-dependent RNA helicase HrpB; Provisional	NA|177aa|down_1|NZ_CP025982.1_4088826_4089357_+	PRK15124, PRK15124, RNA 2',3'-cyclic phosphodiesterase	NA|235aa|down_2|NZ_CP025982.1_4089369_4090074_+	PRK00347, PRK00347, DNA/RNA nuclease SfsA	NA|152aa|down_3|NZ_CP025982.1_4090254_4090710_+	PRK10778, dksA, RNA polymerase-binding protein DksA	NA|299aa|down_4|NZ_CP025982.1_4090835_4091732_+	PRK05710, PRK05710, tRNA glutamyl-Q(34) synthetase GluQRS	NA|473aa|down_5|NZ_CP025982.1_4091780_4093199_+	PRK11623, pcnB, poly(A) polymerase I; Provisional	NA|162aa|down_6|NZ_CP025982.1_4093267_4093753_+	PRK10239, PRK10239, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase	NA|264aa|down_7|NZ_CP025982.1_4093870_4094662_+	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed	NA|285aa|down_8|NZ_CP025982.1_4094673_4095528_+	PRK00380, panC, pantoate--beta-alanine ligase; Reviewed	NA|127aa|down_9|NZ_CP025982.1_4095668_4096049_+	PRK05449, PRK05449, aspartate alpha-decarboxylase; Provisional
GCF_011064805.1_ASM1106480v1	NZ_CP025982	Enterobacteriaceae bacterium A-F18 chromosome, complete genome	4	4509290-4509379	4	CRISPRCasFinder	no		csa3,DinG,RT,DEDDh,cas3,WYL	Orphan	CCACAGGGAGAGGGAGCAAACACTAAAAA	29	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,RT,DEDDh,cas3,WYL	NA,NA	NA|156aa|up_9|NZ_CP025982.1_4497853_4498321_-	PRK10372, PRK10372, PTS ascorbate transporter subunit IIA	NA|102aa|up_8|NZ_CP025982.1_4498330_4498636_-	PRK10222, PRK10222, PTS ascorbate transporter subunit IIB	NA|466aa|up_7|NZ_CP025982.1_4498650_4500048_-	PRK09548, PRK09548, PTS ascorbate-specific subunit IIBC	NA|252aa|up_6|NZ_CP025982.1_4501591_4502347_+	PRK13509, PRK13509, HTH-type transcriptional regulator UlaR	NA|250aa|up_5|NZ_CP025982.1_4502347_4503097_-	PRK10566, PRK10566, esterase; Provisional	NA|110aa|up_4|NZ_CP025982.1_4503284_4503614_+	PRK14864, PRK14864, biofilm peroxide resistance protein BsmA	NA|92aa|up_3|NZ_CP025982.1_4503749_4504025_+	pfam07338, DUF1471, Protein of unknown function (DUF1471)	NA|645aa|up_2|NZ_CP025982.1_4504198_4506133_+	pfam17201, Cache_3-Cache_2, Cache 3/Cache 2 fusion domain	NA|540aa|up_1|NZ_CP025982.1_4506129_4507749_-	PRK11561, PRK11561, isovaleryl CoA dehydrogenase; Provisional	NA|427aa|up_0|NZ_CP025982.1_4507911_4509192_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|245aa|down_0|NZ_CP025982.1_4509404_4510139_-	PRK11181, PRK11181, 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA|259aa|down_1|NZ_CP025982.1_4510232_4511009_-	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|257aa|down_2|NZ_CP025982.1_4511008_4511779_-	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|334aa|down_3|NZ_CP025982.1_4511775_4512777_-	cd13560, PBP2_taurine, Taurine-binding periplasmic protein; the type 2 periplasmic binding protein fold	NA|242aa|down_4|NZ_CP025982.1_4512852_4513578_-	pfam01177, Asp_Glu_race, Asp/Glu/Hydantoin racemase	NA|339aa|down_5|NZ_CP025982.1_4513570_4514587_-	PRK03910, PRK03910, D-cysteine desulfhydrase; Validated	NA|811aa|down_6|NZ_CP025982.1_4514808_4517241_-	PRK11642, PRK11642, ribonuclease R	NA|143aa|down_7|NZ_CP025982.1_4517395_4517824_-	PRK11014, PRK11014, HTH-type transcriptional repressor NsrR	NA|433aa|down_8|NZ_CP025982.1_4517975_4519274_-	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|66aa|down_9|NZ_CP025982.1_4519377_4519575_-	COG3242, COG3242, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_011064805.1_ASM1106480v1	NZ_CP025982	Enterobacteriaceae bacterium A-F18 chromosome, complete genome	5	5440237-5440321	5	CRISPRCasFinder	no		csa3,DinG,RT,DEDDh,cas3,WYL	Orphan	GGGAGAGGGAGCAAACACTAAAAA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,RT,DEDDh,cas3,WYL	NA,NA	NA|358aa|up_9|NZ_CP025982.1_5429369_5430443_+	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA|247aa|up_8|NZ_CP025982.1_5430439_5431180_+	PRK09454, ugpQ, cytoplasmic glycerophosphodiester phosphodiesterase; Provisional	NA|151aa|up_7|NZ_CP025982.1_5431176_5431629_-	PRK10350, PRK10350, DUF2756 family protein	NA|164aa|up_6|NZ_CP025982.1_5433570_5434062_-	PRK10140, PRK10140, N-acetyltransferase	NA|214aa|up_5|NZ_CP025982.1_5434276_5434918_-	pfam04519, Bactofilin, Polymer-forming cytoskeletal	NA|346aa|up_4|NZ_CP025982.1_5435216_5436254_+	PRK10206, PRK10206, putative oxidoreductase; Provisional	NA|232aa|up_3|NZ_CP025982.1_5436377_5437073_+	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|332aa|up_2|NZ_CP025982.1_5437175_5438171_+	PRK14987, PRK14987, HTH-type transcriptional regulator GntR	NA|174aa|up_1|NZ_CP025982.1_5438307_5438829_+	PRK11545, gntK, gluconokinase	NA|447aa|up_0|NZ_CP025982.1_5438841_5440182_+	PRK10472, PRK10472, low affinity gluconate transporter; Provisional	NA|198aa|down_0|NZ_CP025982.1_5440374_5440968_-	PRK10739, PRK10739, YhgN family NAAT transporter	NA|369aa|down_1|NZ_CP025982.1_5441130_5442237_+	PRK06598, PRK06598, aspartate-semialdehyde dehydrogenase; Reviewed	NA|728aa|down_2|NZ_CP025982.1_5442500_5444684_+	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|659aa|down_3|NZ_CP025982.1_5444683_5446660_+	PRK03705, PRK03705, glycogen debranching protein GlgX	NA|429aa|down_4|NZ_CP025982.1_5446674_5447961_+	PRK00725, glgC, glucose-1-phosphate adenylyltransferase; Provisional	NA|478aa|down_5|NZ_CP025982.1_5448052_5449486_+	PRK00654, glgA, glycogen synthase GlgA	NA|816aa|down_6|NZ_CP025982.1_5449505_5451953_+	PRK14986, PRK14986, glycogen phosphorylase; Provisional	NA|153aa|down_7|NZ_CP025982.1_5452151_5452610_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|507aa|down_8|NZ_CP025982.1_5452795_5454316_+	COG0226, PstS, ABC-type phosphate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|502aa|down_9|NZ_CP025982.1_5454364_5455870_-	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed
