assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011149495.1_ASM1114949v1	NZ_CP049756	Pasteurella multocida strain KVNON-213 chromosome, complete genome	1	286180-288010	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas3	csa3,cas3,cas9,cas1,cas2,DEDDh,DinG,cas3-cas2,cas6f,cas7f,cas5f,cas8f	Unclear	TTTCTAAGCTGCCTATACGGCAGTTAAC,TTTCTAAGCTGCCTATACGGCAGTTAAC,TTTCTAAGCTGCCTATACGGCAGTTAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	30,30,7	30	Unclear	csa3,cas3,cas9,cas1,cas2,DEDDh,DinG,cas3-cas2,cas6f,cas7f,cas5f,cas8f	NA,NA	NA|529aa|up_9|NZ_CP049756.1_274221_275808_-	COG1620, LldP, L-lactate permease [Energy production and conversion]	NA|456aa|up_8|NZ_CP049756.1_276170_277538_-	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|204aa|up_7|NZ_CP049756.1_277565_278177_-	COG2915, COG2915, Uncharacterized protein involved in purine metabolism [General function prediction only]	NA|309aa|up_6|NZ_CP049756.1_278363_279290_+	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional	NA|481aa|up_5|NZ_CP049756.1_279326_280769_+	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]	NA|340aa|up_4|NZ_CP049756.1_280794_281814_+	TIGR02417, Fructose_repressor_Catabolite_repressor/activator	NA|475aa|up_3|NZ_CP049756.1_282042_283467_+	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|137aa|up_2|NZ_CP049756.1_283583_283994_+	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and    metabolism]	NA|349aa|up_1|NZ_CP049756.1_284059_285106_+	PRK10916, PRK10916, ADP-heptose--LPS heptosyltransferase RfaF	NA|322aa|up_0|NZ_CP049756.1_285102_286068_+	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC	cas3|446aa|down_0|NZ_CP049756.1_288147_289485_-	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional	NA|238aa|down_1|NZ_CP049756.1_289596_290310_+	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|235aa|down_2|NZ_CP049756.1_290357_291062_-	COG3201, PnuC, Nicotinamide mononucleotide transporter [Coenzyme metabolism]	NA|968aa|down_3|NZ_CP049756.1_291339_294243_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_4|NZ_CP049756.1_294323_294983_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|190aa|down_5|NZ_CP049756.1_295046_295616_+	pfam04220, YihI, Der GTPase activator (YihI)	NA|143aa|down_6|NZ_CP049756.1_295621_296050_+	pfam10675, DUF2489, Protein of unknown function (DUF2489)	NA|456aa|down_7|NZ_CP049756.1_296073_297441_+	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|223aa|down_8|NZ_CP049756.1_297481_298150_+	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|373aa|down_9|NZ_CP049756.1_298292_299411_+	pfam03702, AnmK, Anhydro-N-acetylmuramic acid kinase
GCF_011149495.1_ASM1114949v1	NZ_CP049756	Pasteurella multocida strain KVNON-213 chromosome, complete genome	2	1056213-1056644	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2	csa3,cas3,cas9,cas1,cas2,DEDDh,DinG,cas3-cas2,cas6f,cas7f,cas5f,cas8f	Type II-B, or Type II-C?, Type II-B,Type II-A,Type II-C	ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC,ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC,ATTGTAGCACTGCGAAATGAGAGAGGGAACTACAAC	36,36,36	1	1	1056249-1056278	NZ_CP049756.1_1598916-1598887	NA:NA:NA	6,6,6	6	TypeII-B,orTypeII-C?,TypeII-B,TypeII-A,TypeII-C	csa3,cas3,cas9,cas1,cas2,DEDDh,DinG,cas3-cas2,cas6f,cas7f,cas5f,cas8f	NA,NA|67aa|down_2|NZ_CP049756.1_1057946_1058147_+,NA|105aa|down_8|NZ_CP049756.1_1068134_1068449_-,NA|157aa|down_9|NZ_CP049756.1_1068453_1068924_-	NA|404aa|up_9|NZ_CP049756.1_1044298_1045510_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|148aa|up_8|NZ_CP049756.1_1045537_1045981_+	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms]	NA|1033aa|up_7|NZ_CP049756.1_1045990_1049089_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|355aa|up_6|NZ_CP049756.1_1049147_1050212_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|117aa|up_5|NZ_CP049756.1_1050291_1050642_+	TIGR00014, Putative_arsenate_reductase	NA|94aa|up_4|NZ_CP049756.1_1050714_1050996_+	COG3036, COG3036, Uncharacterized protein conserved in bacteria [Function unknown]	NA|98aa|up_3|NZ_CP049756.1_1051000_1051294_+	pfam17347, DUF5377, Family of unknown function (DUF5377)	cas9|1057aa|up_2|NZ_CP049756.1_1051518_1054689_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|305aa|up_1|NZ_CP049756.1_1054745_1055660_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|109aa|up_0|NZ_CP049756.1_1055652_1055979_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|95aa|down_0|NZ_CP049756.1_1057088_1057373_+	pfam14076, DUF4258, Domain of unknown function (DUF4258)	NA|108aa|down_1|NZ_CP049756.1_1057437_1057761_+	pfam12441, CopG_antitoxin, CopG antitoxin of type II toxin-antitoxin system	NA|67aa|down_2|NZ_CP049756.1_1057946_1058147_+	NA	NA|458aa|down_3|NZ_CP049756.1_1058901_1060275_-	PRK04833, PRK04833, argininosuccinate lyase; Provisional	NA|383aa|down_4|NZ_CP049756.1_1062181_1063330_+	PRK05111, PRK05111, acetylornithine deacetylase; Provisional	NA|263aa|down_5|NZ_CP049756.1_1063415_1064204_-	COG3774, OCH1, Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane]	NA|481aa|down_6|NZ_CP049756.1_1064956_1066399_+	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|391aa|down_7|NZ_CP049756.1_1066667_1067840_-	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|105aa|down_8|NZ_CP049756.1_1068134_1068449_-	NA	NA|157aa|down_9|NZ_CP049756.1_1068453_1068924_-	NA
GCF_011149495.1_ASM1114949v1	NZ_CP049756	Pasteurella multocida strain KVNON-213 chromosome, complete genome	3	1630260-1631216	3,3,3	CRISPRCasFinder,CRT,PILER-CR	no	DinG	csa3,cas3,cas9,cas1,cas2,DEDDh,DinG,cas3-cas2,cas6f,cas7f,cas5f,cas8f	Type IV-A	GTCTCAATCCCTTTAGAACAGGGCAGTGTCTTTCGAC,GTCTCAATCCCTTTAGAACAGGGCAGTGTCTTTCGAC,GTCTCAATCCCTTTAGAACAGGGCAGTGTCTTTCGAC	37,37,37	0	0	NA	NA	NA:NA:NA	13,13,12	13	Orphan	csa3,cas3,cas9,cas1,cas2,DEDDh,DinG,cas3-cas2,cas6f,cas7f,cas5f,cas8f	NA,NA|234aa|down_4|NZ_CP049756.1_1636122_1636824_-	NA|563aa|up_9|NZ_CP049756.1_1618077_1619766_+	PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase FadD	NA|384aa|up_8|NZ_CP049756.1_1619820_1620972_+	COG0349, Rnd, Ribonuclease D [Translation, ribosomal structure and biogenesis]	NA|713aa|up_7|NZ_CP049756.1_1621045_1623184_-	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|402aa|up_6|NZ_CP049756.1_1623252_1624458_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed	NA|148aa|up_5|NZ_CP049756.1_1624744_1625188_+	COG3092, COG3092, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|up_4|NZ_CP049756.1_1625343_1625835_+	PRK10845, PRK10845, colicin V production protein; Provisional	NA|505aa|up_3|NZ_CP049756.1_1625848_1627363_+	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional	NA|196aa|up_2|NZ_CP049756.1_1627522_1628110_+	PRK06029, PRK06029, UbiX family flavin prenyltransferase	NA|241aa|up_1|NZ_CP049756.1_1628126_1628849_-	PRK05690, PRK05690, molybdopterin biosynthesis protein MoeB; Provisional	NA|407aa|up_0|NZ_CP049756.1_1628850_1630071_-	PRK10680, PRK10680, molybdopterin biosynthesis protein MoeA; Provisional	NA|219aa|down_0|NZ_CP049756.1_1631505_1632162_+	TIGR00063, GTP_cyclohydrolase_1, GTP cyclohydrolase I	NA|654aa|down_1|NZ_CP049756.1_1632256_1634218_-	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|268aa|down_2|NZ_CP049756.1_1634465_1635269_+	PRK11756, PRK11756, exonuclease III; Provisional	NA|258aa|down_3|NZ_CP049756.1_1635278_1636052_+	TIGR01619, Uncharacterized_protein_HI_0040, TIGR01619 family protein	NA|234aa|down_4|NZ_CP049756.1_1636122_1636824_-	NA	NA|138aa|down_5|NZ_CP049756.1_1637053_1637467_-	COG3105, COG3105, Uncharacterized protein conserved in bacteria [Function unknown]	NA|587aa|down_6|NZ_CP049756.1_1637587_1639348_-	TIGR03549, TIGR03549, YcaO domain protein	NA|239aa|down_7|NZ_CP049756.1_1639425_1640142_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|234aa|down_8|NZ_CP049756.1_1640164_1640866_+	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase	NA|435aa|down_9|NZ_CP049756.1_1641015_1642320_+	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed
GCF_011149495.1_ASM1114949v1	NZ_CP049756	Pasteurella multocida strain KVNON-213 chromosome, complete genome	4	1701755-1701838	4	CRISPRCasFinder	no		csa3,cas3,cas9,cas1,cas2,DEDDh,DinG,cas3-cas2,cas6f,cas7f,cas5f,cas8f	Orphan	AACATCGCATAGATGGCTTAGAAA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,cas9,cas1,cas2,DEDDh,DinG,cas3-cas2,cas6f,cas7f,cas5f,cas8f	NA|256aa|up_9|NZ_CP049756.1_1694785_1695553_+,NA|111aa|up_8|NZ_CP049756.1_1695568_1695901_+,NA|280aa|up_7|NZ_CP049756.1_1695869_1696709_+,NA|101aa|up_6|NZ_CP049756.1_1696718_1697021_+,NA|131aa|up_4|NZ_CP049756.1_1698527_1698920_+,NA|58aa|up_1|NZ_CP049756.1_1700132_1700306_+,NA|84aa|down_3|NZ_CP049756.1_1705476_1705728_+,NA|118aa|down_5|NZ_CP049756.1_1706435_1706789_+	NA|256aa|up_9|NZ_CP049756.1_1694785_1695553_+	NA	NA|111aa|up_8|NZ_CP049756.1_1695568_1695901_+	NA	NA|280aa|up_7|NZ_CP049756.1_1695869_1696709_+	NA	NA|101aa|up_6|NZ_CP049756.1_1696718_1697021_+	NA	NA|402aa|up_5|NZ_CP049756.1_1697099_1698305_+	pfam14020, DUF4236, Protein of unknown function (DUF4236)	NA|131aa|up_4|NZ_CP049756.1_1698527_1698920_+	NA	NA|76aa|up_3|NZ_CP049756.1_1698988_1699216_+	pfam13227, DUF4035, Protein of unknown function (DUF4035)	NA|173aa|up_2|NZ_CP049756.1_1699481_1700000_+	pfam10547, P22_AR_N, P22_AR N-terminal domain	NA|58aa|up_1|NZ_CP049756.1_1700132_1700306_+	NA	NA|173aa|up_0|NZ_CP049756.1_1701182_1701701_+	pfam14686, fn3_3, Polysaccharide lyase family 4, domain II	NA|653aa|down_0|NZ_CP049756.1_1701919_1703878_+	pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	NA|275aa|down_1|NZ_CP049756.1_1704185_1705010_+	pfam10547, P22_AR_N, P22_AR N-terminal domain	NA|118aa|down_2|NZ_CP049756.1_1705064_1705418_+	pfam10711, DUF2513, Hypothetical protein (DUF2513)	NA|84aa|down_3|NZ_CP049756.1_1705476_1705728_+	NA	NA|218aa|down_4|NZ_CP049756.1_1705785_1706439_+	pfam18352, Gp138_N, Phage protein Gp138 N-terminal domain	NA|118aa|down_5|NZ_CP049756.1_1706435_1706789_+	NA	NA|380aa|down_6|NZ_CP049756.1_1706799_1707939_+	COG3299, XkdT, Uncharacterized homolog of phage Mu protein gp47 [Function unknown]	NA|193aa|down_7|NZ_CP049756.1_1707938_1708517_+	pfam11041, DUF2612, Protein of unknown function (DUF2612)	NA|496aa|down_8|NZ_CP049756.1_1708529_1710017_+	pfam07484, Collar, Phage Tail Collar Domain	NA|198aa|down_9|NZ_CP049756.1_1710016_1710610_+	pfam14301, DUF4376, Domain of unknown function (DUF4376)
GCF_011149495.1_ASM1114949v1	NZ_CP049756	Pasteurella multocida strain KVNON-213 chromosome, complete genome	5	2107283-2107849	5,4,4	CRISPRCasFinder,CRT,PILER-CR	no	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f	csa3,cas3,cas9,cas1,cas2,DEDDh,DinG,cas3-cas2,cas6f,cas7f,cas5f,cas8f	Type I-F	TTTCTAAGCCATCTACACGATGGTGAAC,TTTCTAAGCCATCTACACGATGGTGAAC,TTTCTAAGCCATCTACACGATGGTGAAC	28,28,28	0	0	NA	NA	NA:NA:NA	9,9,8	9	TypeI-F	csa3,cas3,cas9,cas1,cas2,DEDDh,DinG,cas3-cas2,cas6f,cas7f,cas5f,cas8f	NA|197aa|up_3|NZ_CP049756.1_2100187_2100778_-,NA	NA|108aa|up_9|NZ_CP049756.1_2095561_2095885_-	TIGR02011, Protein_yfhF	NA|129aa|up_8|NZ_CP049756.1_2095954_2096341_-	PRK11325, PRK11325, scaffold protein; Provisional	NA|405aa|up_7|NZ_CP049756.1_2096585_2097800_-	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|155aa|up_6|NZ_CP049756.1_2097847_2098312_-	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR	NA|239aa|up_5|NZ_CP049756.1_2098390_2099107_-	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|268aa|up_4|NZ_CP049756.1_2099320_2100124_+	PRK10757, PRK10757, inositol-1-monophosphatase	NA|197aa|up_3|NZ_CP049756.1_2100187_2100778_-	NA	NA|619aa|up_2|NZ_CP049756.1_2100918_2102775_-	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	cas3-cas2|1107aa|up_1|NZ_CP049756.1_2102832_2106153_-	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas1|327aa|up_0|NZ_CP049756.1_2106133_2107114_-	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas6f|187aa|down_0|NZ_CP049756.1_2107989_2108550_-	TIGR02563, conserved_hypothetical_protein, CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST	cas7f|336aa|down_1|NZ_CP049756.1_2108552_2109560_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|328aa|down_2|NZ_CP049756.1_2109562_2110546_-	TIGR02565, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy2	cas8f|445aa|down_3|NZ_CP049756.1_2110555_2111890_-	TIGR02564, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy1	NA|720aa|down_4|NZ_CP049756.1_2112139_2114299_-	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA|683aa|down_5|NZ_CP049756.1_2114432_2116481_-	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|371aa|down_6|NZ_CP049756.1_2116662_2117775_+	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC	NA|90aa|down_7|NZ_CP049756.1_2117911_2118181_-	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|968aa|down_8|NZ_CP049756.1_2118348_2121252_-	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|172aa|down_9|NZ_CP049756.1_2121293_2121809_-	TIGR04110, hypothetical_protein_VSWAT3_12502, heme utilization protein HutZ
