assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011212505.1_ASM1121250v1	NZ_CP047608	Methylobacterium sp. CLZ chromosome, complete genome	1	1022016-1022104	1	CRISPRCasFinder	no		csa3,DEDDh,WYL,cas3,Cas9_archaeal	Orphan	GCATCGTCTTTTCCCGAAAGCCGGT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,cas3,Cas9_archaeal	NA,NA|131aa|down_9|NZ_CP047608.1_1030192_1030585_+	NA|136aa|up_9|NZ_CP047608.1_1011905_1012313_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|112aa|up_8|NZ_CP047608.1_1012762_1013098_+	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only]	NA|502aa|up_7|NZ_CP047608.1_1013939_1015445_+	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase	NA|197aa|up_6|NZ_CP047608.1_1015530_1016121_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|298aa|up_5|NZ_CP047608.1_1016498_1017392_+	cd03235, ABC_Metallic_Cations, ATP-binding cassette domain of the metal-type transporters	NA|296aa|up_4|NZ_CP047608.1_1017388_1018276_+	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|199aa|up_3|NZ_CP047608.1_1018545_1019142_-	pfam06055, ExoD, Exopolysaccharide synthesis, ExoD	NA|254aa|up_2|NZ_CP047608.1_1019429_1020191_+	pfam17036, CBP_BcsS, Cellulose biosynthesis protein BcsS	NA|245aa|up_1|NZ_CP047608.1_1020197_1020932_-	cd05233, SDR_c, classical (c) SDRs	NA|289aa|up_0|NZ_CP047608.1_1021097_1021964_+	COG0223, Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis]	NA|51aa|down_0|NZ_CP047608.1_1022140_1022293_+	pfam10013, DUF2256, Uncharacterized protein conserved in bacteria (DUF2256)	NA|198aa|down_1|NZ_CP047608.1_1022299_1022893_-	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function	NA|337aa|down_2|NZ_CP047608.1_1022879_1023890_-	cd03522, MoeA_like, MoeA_like	NA|239aa|down_3|NZ_CP047608.1_1023894_1024611_-	pfam13478, XdhC_C, XdhC Rossmann domain	NA|108aa|down_4|NZ_CP047608.1_1024675_1024999_-	COG1975, XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family [Posttranslational modification, protein turnover, chaperones]	NA|371aa|down_5|NZ_CP047608.1_1025167_1026280_+	cd06342, PBP1_ABC_LIVBP-like, type 1 periplasmic ligand-binding domain of ABC (Atpase Binding Cassette)-type active transport systems involved in the transport of all three branched chain aliphatic amino acids (leucine, isoleucine and valine)	NA|92aa|down_6|NZ_CP047608.1_1026604_1026880_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|749aa|down_7|NZ_CP047608.1_1026957_1029204_-	PRK05561, PRK05561, DNA topoisomerase 4 subunit A	NA|248aa|down_8|NZ_CP047608.1_1029321_1030065_-	PRK00085, recO, DNA repair protein RecO; Reviewed	NA|131aa|down_9|NZ_CP047608.1_1030192_1030585_+	NA
GCF_011212505.1_ASM1121250v1	NZ_CP047608	Methylobacterium sp. CLZ chromosome, complete genome	2	1410357-1410454	2	CRISPRCasFinder	no		csa3,DEDDh,WYL,cas3,Cas9_archaeal	Orphan	TTCCGAAAGCTGGTGGCCACCTTTCGGGACGATGC	35	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,cas3,Cas9_archaeal	NA|244aa|up_2|NZ_CP047608.1_1407758_1408490_-,NA|76aa|down_9|NZ_CP047608.1_1418791_1419019_-	NA|1769aa|up_9|NZ_CP047608.1_1395252_1400559_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|688aa|up_8|NZ_CP047608.1_1400614_1402678_+	COG4953, PbpC, Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell envelope biogenesis, outer membrane]	NA|107aa|up_7|NZ_CP047608.1_1402829_1403150_+	PRK11431, PRK11431, quaternary ammonium compound efflux SMR transporter SugE	NA|264aa|up_6|NZ_CP047608.1_1403159_1403951_-	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|216aa|up_5|NZ_CP047608.1_1404001_1404649_-	TIGR03784, marine_sortase, sortase, marine proteobacterial type	NA|728aa|up_4|NZ_CP047608.1_1404645_1406829_-	TIGR03788, marine_srt_targ, marine proteobacterial sortase target protein	NA|203aa|up_3|NZ_CP047608.1_1407062_1407671_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|244aa|up_2|NZ_CP047608.1_1407758_1408490_-	NA	NA|338aa|up_1|NZ_CP047608.1_1408555_1409569_-	COG2215, COG2215, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|222aa|up_0|NZ_CP047608.1_1409559_1410225_-	pfam06226, DUF1007, Protein of unknown function (DUF1007)	NA|153aa|down_0|NZ_CP047608.1_1410455_1410914_-	pfam03918, CcmH, Cytochrome C biogenesis protein	NA|667aa|down_1|NZ_CP047608.1_1410910_1412911_-	COG1138, CcmF, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones]	NA|174aa|down_2|NZ_CP047608.1_1412969_1413491_-	PRK13254, PRK13254, cytochrome c maturation protein CcmE	NA|517aa|down_3|NZ_CP047608.1_1413651_1415202_-	COG4235, COG4235, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones]	NA|472aa|down_4|NZ_CP047608.1_1415349_1416765_-	cd16954, HATPase_PhoQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG	NA|79aa|down_5|NZ_CP047608.1_1416857_1417094_+	pfam07704, PSK_trans_fac, Rv0623-like transcription factor	NA|133aa|down_6|NZ_CP047608.1_1417093_1417492_+	cd09871, PIN_MtVapC28-VapC30-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC28 and 30 and related proteins	NA|226aa|down_7|NZ_CP047608.1_1417496_1418174_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|124aa|down_8|NZ_CP047608.1_1418223_1418595_-	pfam03413, PepSY, Peptidase propeptide and YPEB domain	NA|76aa|down_9|NZ_CP047608.1_1418791_1419019_-	NA
GCF_011212505.1_ASM1121250v1	NZ_CP047608	Methylobacterium sp. CLZ chromosome, complete genome	3	2098669-2098758	3	CRISPRCasFinder	no		csa3,DEDDh,WYL,cas3,Cas9_archaeal	Orphan	CCGGCTTTCGGAAAAAGACGATGCAC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,cas3,Cas9_archaeal	NA|101aa|up_4|NZ_CP047608.1_2093422_2093725_-,NA|110aa|down_0|NZ_CP047608.1_2098768_2099098_-,NA|68aa|down_6|NZ_CP047608.1_2105952_2106156_-,NA|80aa|down_7|NZ_CP047608.1_2106167_2106407_-	NA|499aa|up_9|NZ_CP047608.1_2082860_2084357_+	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism]	NA|419aa|up_8|NZ_CP047608.1_2084698_2085955_+	pfam07642, BBP2, Putative beta-barrel porin-2, OmpL-like	NA|871aa|up_7|NZ_CP047608.1_2086164_2088777_+	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]	NA|712aa|up_6|NZ_CP047608.1_2088923_2091059_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|656aa|up_5|NZ_CP047608.1_2091436_2093404_+	COG3920, COG3920, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|101aa|up_4|NZ_CP047608.1_2093422_2093725_-	NA	NA|773aa|up_3|NZ_CP047608.1_2093721_2096040_-	TIGR01701, Hypothetical_protein_Rv2900c/MT2968/Mb2924c	NA|359aa|up_2|NZ_CP047608.1_2096370_2097447_-	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase	NA|117aa|up_1|NZ_CP047608.1_2097443_2097794_-	COG3502, COG3502, Uncharacterized protein conserved in bacteria [Function unknown]	NA|211aa|up_0|NZ_CP047608.1_2098007_2098640_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|110aa|down_0|NZ_CP047608.1_2098768_2099098_-	NA	NA|72aa|down_1|NZ_CP047608.1_2099251_2099467_-	pfam11324, DUF3126, Protein of unknown function (DUF3126)	NA|287aa|down_2|NZ_CP047608.1_2099606_2100467_-	PRK11132, cysE, serine acetyltransferase; Provisional	NA|300aa|down_3|NZ_CP047608.1_2100726_2101626_-	PRK08154, PRK08154, anaerobic benzoate catabolism transcriptional regulator; Reviewed	NA|542aa|down_4|NZ_CP047608.1_2101917_2103543_-	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold	NA|764aa|down_5|NZ_CP047608.1_2103539_2105831_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|68aa|down_6|NZ_CP047608.1_2105952_2106156_-	NA	NA|80aa|down_7|NZ_CP047608.1_2106167_2106407_-	NA	NA|252aa|down_8|NZ_CP047608.1_2106581_2107337_-	PRK09468, ompR, osmolarity response regulator; Provisional	NA|609aa|down_9|NZ_CP047608.1_2107749_2109576_+	pfam11849, DUF3369, Domain of unknown function (DUF3369)
GCF_011212505.1_ASM1121250v1	NZ_CP047608	Methylobacterium sp. CLZ chromosome, complete genome	4	4809526-4809615	4	CRISPRCasFinder	no		csa3,DEDDh,WYL,cas3,Cas9_archaeal	Orphan	GAGCATCGTCCCGAAAGGTGGTCGCCGGC	29	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,cas3,Cas9_archaeal	NA|72aa|up_8|NZ_CP047608.1_4799468_4799684_+,NA|265aa|down_5|NZ_CP047608.1_4817773_4818568_+	NA|187aa|up_9|NZ_CP047608.1_4798704_4799265_+	pfam12836, HHH_3, Helix-hairpin-helix motif	NA|72aa|up_8|NZ_CP047608.1_4799468_4799684_+	NA	NA|168aa|up_7|NZ_CP047608.1_4799680_4800184_+	pfam11454, DUF3016, Protein of unknown function (DUF3016)	NA|295aa|up_6|NZ_CP047608.1_4801163_4802048_+	COG1409, Icc, Predicted phosphohydrolases [General function prediction only]	NA|487aa|up_5|NZ_CP047608.1_4802070_4803531_-	COG0591, PutP, Na+/proline symporter [Amino acid transport and metabolism / General function prediction only]	NA|68aa|up_4|NZ_CP047608.1_4803527_4803731_-	pfam11755, DUF3311, Protein of unknown function (DUF3311)	NA|679aa|up_3|NZ_CP047608.1_4803886_4805923_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|150aa|up_2|NZ_CP047608.1_4806455_4806905_-	cd07176, terB, tellurite resistance protein terB	NA|249aa|up_1|NZ_CP047608.1_4806952_4807699_-	cd06422, NTP_transferase_like_1, NTP_transferase_like_1 is a member of the nucleotidyl transferase family	NA|545aa|up_0|NZ_CP047608.1_4807732_4809367_-	COG3178, COG3178, Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]	NA|838aa|down_0|NZ_CP047608.1_4809636_4812150_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|469aa|down_1|NZ_CP047608.1_4812642_4814049_-	pfam05221, AdoHcyase, S-adenosyl-L-homocysteine hydrolase	NA|543aa|down_2|NZ_CP047608.1_4814216_4815845_-	cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS)	NA|204aa|down_3|NZ_CP047608.1_4815998_4816610_-	cd02138, TdsD-like, nitroreductase similar to Burkholderia pseudomallei TdsD	NA|263aa|down_4|NZ_CP047608.1_4816778_4817567_+	PRK08139, PRK08139, enoyl-CoA hydratase; Validated	NA|265aa|down_5|NZ_CP047608.1_4817773_4818568_+	NA	NA|259aa|down_6|NZ_CP047608.1_4818750_4819527_+	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family	NA|479aa|down_7|NZ_CP047608.1_4819420_4820857_-	PRK01642, cls, cardiolipin synthetase; Reviewed	NA|1046aa|down_8|NZ_CP047608.1_4821070_4824208_+	TIGR02786, conserved_hypothetical_protein, double-strand break repair protein AddB, alphaproteobacterial type	NA|1145aa|down_9|NZ_CP047608.1_4824204_4827639_+	TIGR02784, ATP-dependent_nuclease_subunit_A, double-strand break repair helicase AddA, alphaproteobacterial type
GCF_011212505.1_ASM1121250v1	NZ_CP047608	Methylobacterium sp. CLZ chromosome, complete genome	5	5006510-5006604	5	CRISPRCasFinder	no		csa3,DEDDh,WYL,cas3,Cas9_archaeal	Orphan	TAGAGCATCGTCCCGAAAGGTGGCCCCCGGCT	32	1	3	5006542-5006572|5006542-5006572|5006542-5006572	NZ_CP047608.1_667563-667533|NZ_CP047608.1_3812971-3812941|NZ_CP047608.1_1072164-1072194	NA	1	1	Orphan	csa3,DEDDh,WYL,cas3,Cas9_archaeal	NA|146aa|up_4|NZ_CP047608.1_4999219_4999657_+,NA|87aa|down_4|NZ_CP047608.1_5011450_5011711_-,NA|87aa|down_5|NZ_CP047608.1_5011833_5012094_-,NA|78aa|down_8|NZ_CP047608.1_5013592_5013826_-,NA|73aa|down_9|NZ_CP047608.1_5014069_5014288_-	NA|376aa|up_9|NZ_CP047608.1_4993158_4994286_+	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|211aa|up_8|NZ_CP047608.1_4994282_4994915_+	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|909aa|up_7|NZ_CP047608.1_4995231_4997958_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|168aa|up_6|NZ_CP047608.1_4998085_4998589_+	PRK00168, coaD, phosphopantetheine adenylyltransferase; Provisional	NA|180aa|up_5|NZ_CP047608.1_4998614_4999154_+	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|146aa|up_4|NZ_CP047608.1_4999219_4999657_+	NA	NA|154aa|up_3|NZ_CP047608.1_4999660_5000122_+	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|135aa|up_2|NZ_CP047608.1_5000314_5000719_-	cd18161, REC_hyHK_blue-like, phosphoacceptor receiver (REC) domain of hybrid sensor histidine kinase/response regulators similar to Pseudomonas savastanoi blue-light-activated histidine kinase	NA|258aa|up_1|NZ_CP047608.1_5001115_5001889_+	COG4544, COG4544, Uncharacterized conserved protein [Function unknown]	NA|501aa|up_0|NZ_CP047608.1_5001803_5003306_+	cd03468, PolY_like, DNA Polymerase Y-family	NA|359aa|down_0|NZ_CP047608.1_5006689_5007766_-	cd01902, Ntn_CGH, Choloylglycine hydrolase (CGH) is a bile salt-modifying enzyme that hydrolyzes non-peptide carbon-nitrogen bonds in choloylglycine and choloyltaurine, both of which are present in bile	NA|342aa|down_1|NZ_CP047608.1_5008331_5009357_+	cd07209, Pat_hypo_Ecoli_Z1214_like, Hypothetical patatin similar to Z1214 protein of Escherichia coli	NA|365aa|down_2|NZ_CP047608.1_5009451_5010546_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|217aa|down_3|NZ_CP047608.1_5010670_5011321_+	cd03189, GST_C_GTT1_like, C-terminal, alpha helical domain of GTT1-like Glutathione S-transferases	NA|87aa|down_4|NZ_CP047608.1_5011450_5011711_-	NA	NA|87aa|down_5|NZ_CP047608.1_5011833_5012094_-	NA	NA|238aa|down_6|NZ_CP047608.1_5012549_5013263_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|81aa|down_7|NZ_CP047608.1_5013344_5013587_-	COG3514, COG3514, Uncharacterized protein conserved in bacteria [Function unknown]	NA|78aa|down_8|NZ_CP047608.1_5013592_5013826_-	NA	NA|73aa|down_9|NZ_CP047608.1_5014069_5014288_-	NA
