assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011290365.1_ASM1129036v1	NZ_CP049786	Leclercia sp. 29361 chromosome, complete genome	1	1934299-1934384	1	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,cas14j,DinG,RT	Orphan	GCAGCTGCAACGTCTGAGAAGAA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,cas14j,DinG,RT	NA|321aa|up_1|NZ_CP049786.1_1931834_1932797_+,NA|101aa|down_0|NZ_CP049786.1_1935761_1936064_+,NA|254aa|down_1|NZ_CP049786.1_1936173_1936935_+,NA|33aa|down_9|NZ_CP049786.1_1943443_1943542_-	NA|531aa|up_9|NZ_CP049786.1_1921978_1923571_+	COG5511, COG5511, Bacteriophage capsid protein [General function prediction only]	NA|444aa|up_8|NZ_CP049786.1_1923551_1924883_+	cd07022, S49_Sppa_36K_type, Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad	NA|342aa|up_7|NZ_CP049786.1_1925279_1926305_+	pfam03864, Phage_cap_E, Phage major capsid protein E	NA|139aa|up_6|NZ_CP049786.1_1926351_1926768_+	pfam14000, Packaging_FI, DNA packaging protein FI	NA|118aa|up_5|NZ_CP049786.1_1926778_1927132_+	pfam05354, Phage_attach, Phage Head-Tail Attachment	NA|185aa|up_4|NZ_CP049786.1_1927141_1927696_+	pfam06763, Minor_tail_Z, Prophage minor tail protein Z (GPZ)	NA|113aa|up_3|NZ_CP049786.1_1928691_1929030_+	pfam05939, Phage_min_tail, Phage minor tail protein	NA|120aa|up_2|NZ_CP049786.1_1931478_1931838_+	pfam09327, DUF1983, Domain of unknown function (DUF1983)	NA|321aa|up_1|NZ_CP049786.1_1931834_1932797_+	NA	NA|383aa|up_0|NZ_CP049786.1_1932819_1933967_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|101aa|down_0|NZ_CP049786.1_1935761_1936064_+	NA	NA|254aa|down_1|NZ_CP049786.1_1936173_1936935_+	NA	NA|60aa|down_2|NZ_CP049786.1_1937258_1937438_-	COG3729, GsiB, General stress protein [General function prediction only]	NA|331aa|down_3|NZ_CP049786.1_1938466_1939459_-	cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|297aa|down_4|NZ_CP049786.1_1939608_1940499_-	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|51aa|down_5|NZ_CP049786.1_1940823_1940976_+	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed	NA|304aa|down_6|NZ_CP049786.1_1941110_1942022_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|88aa|down_7|NZ_CP049786.1_1942310_1942574_+	pfam14916, CCDC92, Coiled-coil domain of unknown function	NA|83aa|down_8|NZ_CP049786.1_1943067_1943316_+	PRK10457, PRK10457, hypothetical protein; Provisional	NA|33aa|down_9|NZ_CP049786.1_1943443_1943542_-	NA
GCF_011290365.1_ASM1129036v1	NZ_CP049786	Leclercia sp. 29361 chromosome, complete genome	2	2084554-2084684	2	CRISPRCasFinder	no	DEDDh	cas3,WYL,csa3,DEDDh,cas14j,DinG,RT	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,cas14j,DinG,RT	NA,NA|30aa|down_6|NZ_CP049786.1_2092110_2092200_+	NA|357aa|up_9|NZ_CP049786.1_2071878_2072949_+	cd06278, PBP1_LacI-like, ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors	NA|324aa|up_8|NZ_CP049786.1_2072945_2073917_+	pfam12680, SnoaL_2, SnoaL-like domain	NA|380aa|up_7|NZ_CP049786.1_2074035_2075175_+	pfam07366, SnoaL, SnoaL-like polyketide cyclase	NA|437aa|up_6|NZ_CP049786.1_2075174_2076485_+	PRK12447, PRK12447, histidinol dehydrogenase; Reviewed	NA|437aa|up_5|NZ_CP049786.1_2076537_2077848_+	PRK07488, PRK07488, indoleacetamide hydrolase	NA|537aa|up_4|NZ_CP049786.1_2077834_2079445_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|800aa|up_3|NZ_CP049786.1_2079741_2082141_+	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family	NA|211aa|up_2|NZ_CP049786.1_2082124_2082757_+	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit	NA|278aa|up_1|NZ_CP049786.1_2082749_2083583_+	COG3302, DmsC, DMSO reductase anchor subunit [General function prediction only]	NA|273aa|up_0|NZ_CP049786.1_2083639_2084458_+	COG1149, COG1149, MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion]	NA|458aa|down_0|NZ_CP049786.1_2084842_2086216_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|215aa|down_1|NZ_CP049786.1_2086438_2087083_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_2|NZ_CP049786.1_2087117_2088266_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|399aa|down_3|NZ_CP049786.1_2088547_2089744_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_4|NZ_CP049786.1_2089860_2090793_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_5|NZ_CP049786.1_2090789_2091815_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_6|NZ_CP049786.1_2092110_2092200_+	NA	NA|389aa|down_7|NZ_CP049786.1_2092363_2093530_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_8|NZ_CP049786.1_2093565_2094147_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|268aa|down_9|NZ_CP049786.1_2094269_2095073_-	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]
GCF_011290365.1_ASM1129036v1	NZ_CP049786	Leclercia sp. 29361 chromosome, complete genome	3	2168700-2168791	3	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,cas14j,DinG,RT	Orphan	TTTTTGGCAGCCTGCGCTTTCTG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,cas14j,DinG,RT	NA,NA|148aa|down_3|NZ_CP049786.1_2171803_2172247_-	NA|482aa|up_9|NZ_CP049786.1_2157453_2158899_-	cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacylase 1-like protein 2 aminobenzoyl-glutamate utilization protein B subfamily	NA|437aa|up_8|NZ_CP049786.1_2158898_2160209_-	cd05665, M20_Acy1_IAAspH, M20 Peptidases aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase	NA|303aa|up_7|NZ_CP049786.1_2160384_2161293_+	PRK09791, PRK09791, LysR family transcriptional regulator	NA|188aa|up_6|NZ_CP049786.1_2161631_2162195_+	NF033154, endonuc_SmrA, DNA endonuclease SmrA	NA|319aa|up_5|NZ_CP049786.1_2162198_2163155_+	cd05282, ETR_like, 2-enoyl thioester reductase-like	NA|346aa|up_4|NZ_CP049786.1_2163151_2164189_-	PRK12287, tqsA, pheromone autoinducer 2 transporter; Reviewed	NA|121aa|up_3|NZ_CP049786.1_2164606_2164969_+	PRK10452, PRK10452, multidrug/spermidine efflux SMR transporter subunit MdtJ	NA|110aa|up_2|NZ_CP049786.1_2164955_2165285_+	PRK10650, PRK10650, multidrug/spermidine efflux SMR transporter subunit MdtI	NA|721aa|up_1|NZ_CP049786.1_2165370_2167533_+	cd01948, EAL, EAL domain	NA|275aa|up_0|NZ_CP049786.1_2167534_2168359_-	COG3591, COG3591, V8-like Glu-specific endopeptidase [Amino acid transport and metabolism]	NA|185aa|down_0|NZ_CP049786.1_2169114_2169669_-	PRK10877, PRK10877, protein disulfide isomerase II DsbC; Provisional	NA|496aa|down_1|NZ_CP049786.1_2169829_2171317_-	cd06460, M32_Taq, Peptidase family M32, which includes thermostable carboxypeptidases TaqCP, PfuCP and FisCP	NA|111aa|down_2|NZ_CP049786.1_2171477_2171810_-	pfam07377, DUF1493, Protein of unknown function (DUF1493)	NA|148aa|down_3|NZ_CP049786.1_2171803_2172247_-	NA	NA|162aa|down_4|NZ_CP049786.1_2172253_2172739_-	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|417aa|down_5|NZ_CP049786.1_2172956_2174207_-	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|300aa|down_6|NZ_CP049786.1_2174329_2175229_+	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold	NA|407aa|down_7|NZ_CP049786.1_2175356_2176577_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|232aa|down_8|NZ_CP049786.1_2176702_2177398_+	PRK12374, PRK12374, ATP-dependent dethiobiotin synthetase BioD	NA|437aa|down_9|NZ_CP049786.1_2177332_2178643_-	PRK01610, PRK01610, putative voltage-gated ClC-type chloride channel ClcB; Provisional
GCF_011290365.1_ASM1129036v1	NZ_CP049786	Leclercia sp. 29361 chromosome, complete genome	4	3137396-3137498	4	CRISPRCasFinder	no		cas3,WYL,csa3,DEDDh,cas14j,DinG,RT	Orphan	CACCAGACTGTTCCCTCTCCCCTCTGGGGAGAGGG	35	1	1	3137431-3137463	NZ_CP049786.1_3136013-3136045	NA	1	1	Orphan	cas3,WYL,csa3,DEDDh,cas14j,DinG,RT	NA,NA	NA|183aa|up_9|NZ_CP049786.1_3124862_3125411_-	TIGR04008, WcaF, colanic acid biosynthesis acetyltransferase WcaF	NA|249aa|up_8|NZ_CP049786.1_3125426_3126173_-	TIGR04009, wcaE, colanic acid biosynthesis glycosyl transferase WcaE	NA|407aa|up_7|NZ_CP049786.1_3126184_3127405_-	TIGR04010, WcaD, putative colanic acid polymerase WcaD	NA|406aa|up_6|NZ_CP049786.1_3127379_3128597_-	TIGR04015, WcaC, colanic acid biosynthesis glycosyl transferase WcaC	NA|163aa|up_5|NZ_CP049786.1_3128593_3129082_-	PRK10191, PRK10191, putative acyl transferase; Provisional	NA|280aa|up_4|NZ_CP049786.1_3129084_3129924_-	PRK10018, PRK10018, colanic acid biosynthesis glycosyltransferase WcaA	NA|721aa|up_3|NZ_CP049786.1_3129944_3132107_-	PRK11519, PRK11519, tyrosine-protein kinase Wzc	NA|148aa|up_2|NZ_CP049786.1_3132109_3132553_-	PRK10126, PRK10126, low molecular weight protein-tyrosine-phosphatase Wzb	NA|379aa|up_1|NZ_CP049786.1_3132558_3133695_-	PRK15078, PRK15078, polysaccharide export protein Wza; Provisional	NA|528aa|up_0|NZ_CP049786.1_3134387_3135971_+	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]	NA|618aa|down_0|NZ_CP049786.1_3137520_3139374_-	PRK10833, PRK10833, putative assembly protein; Provisional	NA|194aa|down_1|NZ_CP049786.1_3139401_3139983_-	TIGR02274, Probable_deoxycytidine_triphosphate_deaminase, deoxycytidine triphosphate deaminase	NA|214aa|down_2|NZ_CP049786.1_3140074_3140716_-	PRK05480, PRK05480, uridine/cytidine kinase; Provisional	NA|1110aa|down_3|NZ_CP049786.1_3141049_3144379_+	PRK09776, PRK09776, putative diguanylate cyclase; Provisional	NA|289aa|down_4|NZ_CP049786.1_3144349_3145216_-	PRK10308, PRK10308, 3-methyl-adenine DNA glycosylase II; Provisional	NA|451aa|down_5|NZ_CP049786.1_3145349_3146702_+	PRK11678, PRK11678, putative chaperone; Provisional	NA|411aa|down_6|NZ_CP049786.1_3146914_3148147_+	PRK11556, PRK11556, MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA|1042aa|down_7|NZ_CP049786.1_3148146_3151272_+	PRK10503, PRK10503, MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA|1026aa|down_8|NZ_CP049786.1_3151272_3154350_+	PRK10614, PRK10614, multidrug efflux system subunit MdtC; Provisional	NA|472aa|down_9|NZ_CP049786.1_3154349_3155765_+	PRK10504, PRK10504, putative transporter; Provisional
