The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP049956	Stenotrophomonas maltophilia strain NCTC10498 chromosome, complete genome	4928653	367333	387200	4928653	tail,head	Rhizobium_phage(28.57%)	30	NA	NA
WP_049434066.1|367333_369466_-	hypothetical protein	NA	A0A076YL68	Mesorhizobium_phage	29.9	1.1e-59
WP_005412402.1|369465_370056_-	hypothetical protein	NA	A0A2R2ZGD2	Ralstonia_phage	41.9	1.7e-26
WP_049434069.1|370155_371109_-	hypothetical protein	NA	L7TJ83	Rhizobium_phage	42.4	4.1e-62
WP_049434070.1|371135_371921_-	hypothetical protein	NA	A0A1B1IVZ8	uncultured_Mediterranean_phage	31.1	1.1e-20
WP_004154577.1|371920_372064_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005412405.1|372081_373638_-|head,tail	phage collar / T7-like phage head-to-tail joining protein	head,tail	L7TJ79	Rhizobium_phage	37.6	1.1e-85
WP_005412406.1|373630_373783_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049434071.1|373803_373983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049434072.1|374047_374584_-	adenylate kinase	NA	A0A2H4J8A1	uncultured_Caudovirales_phage	46.7	8.1e-31
WP_165710222.1|374679_374997_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049397854.1|375000_375207_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004154583.1|375194_376028_-	hypothetical protein	NA	M1HMA9	Pelagibacter_phage	36.0	2.0e-36
WP_160314061.1|376024_376174_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049434075.1|376170_376461_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004154585.1|376457_376706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005412414.1|376856_377222_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050483582.1|377218_377557_-	hypothetical protein	NA	A0A2H4P845	Pseudomonas_phage	53.2	9.6e-22
WP_065428010.1|377538_379413_-	DNA polymerase	NA	A0A076YNV1	Mesorhizobium_phage	48.2	8.5e-160
WP_049434078.1|379425_380076_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005412417.1|380086_380335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004154589.1|380500_382132_-	toprim domain-containing protein	NA	L7TLT7	Rhizobium_phage	56.6	3.7e-151
WP_049434079.1|382118_382298_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004154592.1|382294_382681_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004154593.1|382692_383055_-	putative N-acetylmuramoyl-L-alanine amidase	NA	I6Q9Z5	Yersinia_phage	40.6	2.5e-15
WP_160314062.1|383055_383493_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A2I7QZP6	Vibrio_phage	31.1	1.2e-05
WP_004154595.1|383476_384142_-	hypothetical protein	NA	A0A076YJ33	Mesorhizobium_phage	40.9	1.5e-26
WP_154267700.1|384141_384300_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049397849.1|384299_384584_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005412422.1|384576_384720_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005412423.1|384764_387200_-	DNA-directed RNA polymerase	NA	L7TQW5	Rhizobium_phage	40.7	1.5e-164
>prophage 2
NZ_CP049956	Stenotrophomonas maltophilia strain NCTC10498 chromosome, complete genome	4928653	391118	468759	4928653	tail,protease,plate,integrase	Escherichia_phage(19.23%)	68	443915:443932	475311:475328
WP_004154600.1|391118_392408_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	58.0	2.9e-135
WP_049449901.1|392551_394999_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	51.9	1.9e-220
WP_005408270.1|395216_395489_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	62.9	4.5e-22
WP_165710223.1|396330_398286_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_044569572.1|398500_399700_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_005412427.1|399696_400461_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_005408274.1|400472_401123_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005408275.1|401136_401589_+	ribonuclease HI	NA	J9Q745	Salmonella_phage	53.4	1.0e-42
WP_165710224.1|401593_402325_+	DNA polymerase III subunit epsilon	NA	A0A1B2LRV5	Wolbachia_phage	42.4	3.8e-07
WP_005408277.1|402436_403141_-	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
WP_165710225.1|403804_406819_-	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_005408281.1|407109_407514_+	hypothetical protein	NA	A0A1C9C5K8	Heterosigma_akashiwo_virus	35.3	1.3e-17
WP_012479274.1|407592_408639_-	glycosyltransferase family 9 protein	NA	NA	NA	NA	NA
WP_012479275.1|408659_409409_+	3-deoxy-D-manno-octulosonic acid kinase	NA	NA	NA	NA	NA
WP_005408284.1|409408_410176_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_012479276.1|410172_410562_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_005408286.1|411037_411355_+	quaternary ammonium compound efflux SMR transporter SugE	NA	NA	NA	NA	NA
WP_165710226.1|411714_422619_+	transporter	NA	NA	NA	NA	NA
WP_033835198.1|422675_423119_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_049442234.1|423878_425009_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012479281.1|425086_426226_-	restriction-modification system methyltransferase	NA	NA	NA	NA	NA
WP_049397088.1|426793_428845_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	41.4	2.1e-47
WP_005408298.1|428851_429172_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_005408299.1|429283_429883_+	recombination protein RecR	NA	NA	NA	NA	NA
WP_005408300.1|429950_430310_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA	NA
WP_005408301.1|430387_430915_-	membrane protein	NA	NA	NA	NA	NA
WP_164172621.1|430911_432861_-	DUF3488 domain-containing protein	NA	NA	NA	NA	NA
WP_111686939.1|432853_433798_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_005408304.1|433800_434754_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_165710227.1|434796_436638_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_012479286.1|436867_437437_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_049397145.1|437550_438060_+	characterized ACR protein	NA	NA	NA	NA	NA
WP_005408308.1|438167_438362_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_005408309.1|438453_439431_+	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_005408310.1|439509_440292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_059033318.1|440548_441493_+	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_005408312.1|441575_442319_+	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.3	4.7e-13
WP_005408313.1|442471_442711_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	44.6	4.6e-10
WP_012479290.1|442854_444117_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
443915:443932	attL	CCGGCGGCGTGGAAGCGA	NA	NA	NA	NA
WP_165710228.1|444307_445672_+	aminodeoxychorismate synthase component I	NA	NA	NA	NA	NA
WP_024956117.1|445870_446932_+	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_005412450.1|446928_447594_+	dTMP kinase	NA	W8D0J5	Erwinia_phage	34.9	5.5e-21
WP_012479293.1|447590_448547_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_005412452.1|448543_448897_+	type IV pilus biogenesis protein PilZ	NA	NA	NA	NA	NA
WP_005408320.1|449316_449697_+	tautomerase family protein	NA	NA	NA	NA	NA
WP_109337334.1|449727_450801_-	phage late control D family protein	NA	D5LGY1	Escherichia_phage	52.5	2.9e-96
WP_005408322.1|450791_451007_-|tail	phage tail protein	tail	A0A193GYC8	Enterobacter_phage	54.3	1.6e-14
WP_005408323.1|450990_451458_-|tail	phage tail protein	tail	A0A218M4I2	Erwinia_phage	35.2	1.1e-15
WP_165710229.1|451460_453908_-|tail	phage tail tape measure protein	tail	A0A1W6JT50	Escherichia_phage	22.1	7.2e-26
WP_005412456.1|454028_454319_-|tail	phage tail assembly protein	tail	A0A193GYZ8	Enterobacter_phage	58.5	1.5e-18
WP_005412457.1|454399_454903_-|tail	phage major tail tube protein	tail	A0A193GYM4	Enterobacter_phage	51.2	1.4e-40
WP_165710230.1|454905_456108_-|tail	phage tail protein	tail	A0A088FVH5	Escherichia_phage	54.0	1.0e-126
WP_165710231.1|456214_456874_-	hypothetical protein	NA	V9IQM3	Stenotrophomonas_phage	33.2	8.7e-19
WP_111686946.1|456875_459077_-|tail	tail fiber domain-containing protein	tail	V9IQX0	Stenotrophomonas_phage	40.2	1.5e-115
WP_049397154.1|459084_459864_-|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	51.1	7.1e-44
WP_111197492.1|459856_460753_-|plate	baseplate assembly protein	plate	V5YTH6	Pseudomonas_phage	56.1	3.2e-80
WP_165710232.1|460755_461094_-|plate	phage baseplate protein	plate	A0A193GYY8	Enterobacter_phage	62.2	7.8e-32
WP_165710233.1|461146_461737_-|plate	phage baseplate assembly protein V	plate	A0A193GYL5	Enterobacter_phage	37.7	7.3e-25
WP_165710234.1|461733_462288_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059033345.1|462641_463019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049459412.1|463015_463501_-	glycoside hydrolase family 104 protein	NA	D5LH07	Escherichia_phage	55.6	5.4e-42
WP_043033662.1|463497_463848_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005408338.1|463844_464294_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_033835195.1|464628_465012_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062606600.1|465164_465803_-	hypothetical protein	NA	A0A2H4J8A1	uncultured_Caudovirales_phage	37.6	2.2e-19
WP_005408341.1|465844_466072_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062606602.1|466146_466422_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710235.1|466422_468759_-|integrase	integrase	integrase	D5LH15	Escherichia_phage	43.3	2.8e-136
475311:475328	attR	CCGGCGGCGTGGAAGCGA	NA	NA	NA	NA
>prophage 3
NZ_CP049956	Stenotrophomonas maltophilia strain NCTC10498 chromosome, complete genome	4928653	1864639	1875532	4928653		Stenotrophomonas_phage(81.82%)	17	NA	NA
WP_165710450.1|1864639_1865050_-	hypothetical protein	NA	S0F2J2	Stenotrophomonas_phage	78.7	1.9e-48
WP_099562511.1|1865181_1865409_+	hypothetical protein	NA	S0F3S0	Stenotrophomonas_phage	66.1	2.1e-09
WP_158234023.1|1865405_1865582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016044712.1|1865571_1866678_+	phage replication protein	NA	S0F3I3	Stenotrophomonas_phage	96.5	6.2e-211
WP_016044713.1|1866684_1866987_+	single-stranded DNA-binding protein	NA	B1NI78	Stenotrophomonas_phage	94.8	5.0e-46
WP_016044714.1|1866990_1867182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710451.1|1867198_1867336_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710190.1|1867455_1868442_+	hypothetical protein	NA	Q4LAU2	Stenotrophomonas_phage	40.6	7.7e-19
WP_016044717.1|1868441_1868726_+	DUF2523 domain-containing protein	NA	NA	NA	NA	NA
WP_099562428.1|1868722_1869937_+	hypothetical protein	NA	A0A077JGB2	Xanthomonas_phage	33.3	1.8e-41
WP_099562427.1|1870060_1870435_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099562426.1|1870502_1870853_-	hypothetical protein	NA	S0F2N2	Stenotrophomonas_phage	71.8	3.1e-39
WP_021201811.1|1871058_1871412_+	hypothetical protein	NA	B1NI82	Stenotrophomonas_phage	62.7	1.5e-38
WP_021201812.1|1871974_1872661_-	conjugal transfer protein TrbP	NA	A0A1W6DY89	Xanthomonas_phage	54.2	2.7e-55
WP_021201813.1|1872657_1873842_-	hypothetical protein	NA	B1NI81	Stenotrophomonas_phage	36.5	7.2e-56
WP_165710452.1|1873838_1874150_-	DUF2523 domain-containing protein	NA	NA	NA	NA	NA
WP_165710453.1|1874158_1875532_-	hypothetical protein	NA	S0F309	Stenotrophomonas_phage	40.6	8.1e-59
>prophage 4
NZ_CP049956	Stenotrophomonas maltophilia strain NCTC10498 chromosome, complete genome	4928653	2360139	2417021	4928653	protease,head,holin,capsid,terminase,tail,integrase,portal	Siphoviridae_environmental_samples(16.67%)	77	2359351:2359369	2401193:2401211
2359351:2359369	attL	CCTTTCACCGGCACCAAAG	NA	NA	NA	NA
WP_165710552.1|2360139_2361054_+	hypothetical protein	NA	A0A1R3Y6Z6	Salmonella_virus	48.3	8.2e-84
WP_165710553.1|2361230_2361896_+	SOS response-associated peptidase	NA	B7SYF4	Stenotrophomonas_phage	97.2	3.8e-123
WP_165710554.1|2361999_2362767_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_165710555.1|2362890_2363634_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099562185.1|2363633_2364023_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165711282.1|2364022_2367412_-	host specificity protein J	NA	A0A2R3UA88	Siphoviridae_environmental_samples	66.1	0.0e+00
WP_165710556.1|2367522_2368107_-|tail	tail assembly protein	tail	Q3HQU4	Burkholderia_phage	52.3	1.4e-44
WP_165710557.1|2368099_2368840_-	peptidase P60	NA	A0A2R3UAR4	Siphoviridae_environmental_samples	59.9	3.9e-84
WP_165710558.1|2368915_2369137_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710559.1|2369133_2369829_-|tail	phage minor tail protein L	tail	A0A2R3UA90	Siphoviridae_environmental_samples	69.3	3.8e-97
WP_165710560.1|2369825_2370296_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710561.1|2370297_2371122_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710562.1|2371131_2371467_-|tail	phage tail protein	tail	A0A2R3UA73	Siphoviridae_environmental_samples	37.8	1.1e-17
WP_165710563.1|2371459_2373613_-	hypothetical protein	NA	A0A2H4PI09	Pseudomonas_phage	31.0	1.5e-46
WP_043034803.1|2373630_2373837_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710564.1|2373869_2374259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710565.1|2374321_2374819_-|tail	phage tail protein	tail	NA	NA	NA	NA
WP_165710566.1|2374871_2375225_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_165710567.1|2375224_2375716_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710568.1|2375721_2376060_-|head	phage head closure protein	head	A0A1J0GUY4	Halomonas_phage	60.2	5.3e-28
WP_165710569.1|2376061_2376406_-|head,tail	phage gp6-like head-tail connector protein	head,tail	Q6JIM5	Burkholderia_virus	48.2	1.7e-21
WP_165710570.1|2376408_2376738_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710571.1|2376795_2378199_-|capsid	phage major capsid protein	capsid	I7HDH9	Xanthomonas_virus	66.1	1.7e-141
WP_053092058.1|2378210_2379074_-|protease	Clp protease ClpP	protease	K7PH05	Enterobacteria_phage	60.7	1.2e-76
WP_165710572.1|2379078_2380362_-|portal	phage portal protein	portal	G0ZT36	Aeromonas_phage	76.1	8.3e-191
WP_165710573.1|2380358_2382116_-|terminase	terminase large subunit	terminase	A0A0U4B0M7	Pseudomonas_phage	68.2	6.4e-226
WP_165710574.1|2382048_2382474_-|terminase	P27 family phage terminase small subunit	terminase	NA	NA	NA	NA
WP_165710575.1|2382602_2382944_-	HNH endonuclease	NA	D4FUN2	Pseudomonas_phage	46.5	7.9e-16
WP_165710576.1|2382943_2383243_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710577.1|2383239_2383542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710578.1|2383517_2383952_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065177529.1|2383945_2384161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065724374.1|2384157_2384475_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710579.1|2384471_2385137_-	glycoside hydrolase family 19 protein	NA	A0A1B0Z086	Pseudomonas_phage	49.8	1.3e-43
WP_165710580.1|2385758_2386460_-	hypothetical protein	NA	C8CLH7	Xylella_phage	59.5	2.8e-68
WP_165710581.1|2386456_2386870_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710582.1|2386859_2387093_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710583.1|2387089_2387662_-	hypothetical protein	NA	A0A067ZG68	Vibrio_phage	45.0	7.5e-27
WP_165710584.1|2387661_2387949_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710585.1|2387948_2388164_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710586.1|2388160_2388664_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710587.1|2388656_2389031_-	hypothetical protein	NA	NA	NA	NA	NA
WP_149902069.1|2389030_2389321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710588.1|2389320_2389539_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710589.1|2389728_2390499_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050584629.1|2391251_2391563_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_043034773.1|2391568_2392012_-	hypothetical protein	NA	Q3HQZ3	Burkholderia_phage	44.5	9.0e-20
WP_165710590.1|2392154_2392349_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710591.1|2392335_2392500_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710592.1|2393061_2393745_+	helix-turn-helix transcriptional regulator	NA	A0A0P0ZE37	Stx2-converting_phage	24.4	5.7e-05
WP_165711283.1|2393760_2394174_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710593.1|2394468_2394705_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710594.1|2394701_2394941_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043034767.1|2394937_2395162_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710595.1|2395158_2395410_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710596.1|2395406_2395841_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710597.1|2396005_2396389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710598.1|2396388_2396631_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710599.1|2396718_2396928_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165711284.1|2396972_2397305_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710600.1|2398226_2398667_+	hypothetical protein	NA	W0LI41	Edwardsiella_phage	38.8	1.5e-14
WP_165710601.1|2398659_2398989_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710602.1|2398985_2399570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710603.1|2399566_2399875_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710604.1|2400070_2401033_-|integrase	site-specific integrase	integrase	A0A1B1P9F9	Acinetobacter_phage	44.0	9.3e-70
WP_165710605.1|2402837_2404664_-	PAS domain S-box protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.4	1.7e-11
2401193:2401211	attR	CCTTTCACCGGCACCAAAG	NA	NA	NA	NA
WP_005410080.1|2405452_2406541_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049397486.1|2406602_2406893_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_005410083.1|2407199_2409389_-	PAS domain S-box protein	NA	A0A127AWB9	Bacillus_phage	32.5	2.6e-19
WP_165710606.1|2409597_2411985_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_165710607.1|2412192_2412408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043034666.1|2413138_2413591_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005410087.1|2413587_2413791_-	PspC domain-containing protein	NA	NA	NA	NA	NA
WP_005413813.1|2413855_2414224_-	YfeK family protein	NA	NA	NA	NA	NA
WP_033833144.1|2414255_2415323_-	class III poly(R)-hydroxyalkanoic acid synthase subunit PhaC	NA	NA	NA	NA	NA
WP_043034665.1|2415319_2416384_-	class III poly(R)-hydroxyalkanoic acid synthase subunit PhaE	NA	NA	NA	NA	NA
WP_005410091.1|2416406_2417021_-|holin	phosphatidylcholine/phosphatidylserine synthase	holin	NA	NA	NA	NA
>prophage 5
NZ_CP049956	Stenotrophomonas maltophilia strain NCTC10498 chromosome, complete genome	4928653	3120926	3162361	4928653	terminase,integrase,tail	uncultured_Caudovirales_phage(37.5%)	54	3120309:3120357	3159520:3159568
3120309:3120357	attL	ATGGTGGGCCGTGAAGGATTCGAACCTTCGACCAAAAGATTAAAAGTCT	NA	NA	NA	NA
WP_165710823.1|3120926_3121499_-	hypothetical protein	NA	K7ZJS7	Xanthomonas_citri_phage	54.1	3.6e-53
WP_165710825.1|3121495_3122452_-	hypothetical protein	NA	K7ZMK0	Xanthomonas_citri_phage	46.5	5.8e-56
WP_165710827.1|3122448_3123636_-	hypothetical protein	NA	A0A2P1JUX7	Xanthomonas_phage	42.9	8.5e-57
WP_165710829.1|3123637_3125269_-	hypothetical protein	NA	A0A2P1JUZ3	Xanthomonas_phage	45.4	4.6e-69
WP_165710831.1|3125350_3125734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710833.1|3125733_3126276_-	lysozyme	NA	A0A1X7QGP1	Escherichia_phage	33.5	7.2e-19
WP_165710835.1|3126268_3126517_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710837.1|3126540_3128184_-|terminase	phage terminase large subunit	terminase	A0A2H4JCA3	uncultured_Caudovirales_phage	50.6	1.4e-145
WP_165710839.1|3128170_3128566_-	hypothetical protein	NA	A0A2H4J7H0	uncultured_Caudovirales_phage	44.8	9.8e-18
WP_165710841.1|3128567_3131015_-	hypothetical protein	NA	A0A2H4J9B2	uncultured_Caudovirales_phage	42.7	4.0e-186
WP_165710843.1|3131014_3133621_-	hypothetical protein	NA	Q858F9	Salmonella_phage	31.4	1.5e-08
WP_165710845.1|3133617_3135696_-	hypothetical protein	NA	A0A2H4JE92	uncultured_Caudovirales_phage	30.1	4.8e-71
WP_100450524.1|3135697_3136174_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710847.1|3136183_3136630_-	GNAT family N-acetyltransferase	NA	A0A2H4J9Z5	uncultured_Caudovirales_phage	38.4	1.2e-19
WP_165710848.1|3136626_3138834_-	hypothetical protein	NA	A0A2H4J6H2	uncultured_Caudovirales_phage	47.1	4.6e-189
WP_032957636.1|3138836_3139427_-	hypothetical protein	NA	A0A2H4JID6	uncultured_Caudovirales_phage	44.7	9.5e-41
WP_165710850.1|3139507_3140026_-	hypothetical protein	NA	A0A2H4J6M8	uncultured_Caudovirales_phage	48.9	1.6e-31
WP_165710852.1|3140090_3140954_-	hypothetical protein	NA	A0A2H4JC66	uncultured_Caudovirales_phage	70.0	7.0e-109
WP_165710854.1|3141174_3142053_-	hypothetical protein	NA	A0A2H4JEQ5	uncultured_Caudovirales_phage	38.9	6.6e-38
WP_165710856.1|3142036_3142279_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710858.1|3142275_3143874_-|tail	phage tail protein	tail	A0A2H4J3N6	uncultured_Caudovirales_phage	61.7	2.0e-173
WP_165710860.1|3143873_3144104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032962289.1|3144108_3144423_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032962291.1|3144426_3144936_-	bZIP transcription factor	NA	NA	NA	NA	NA
WP_050483592.1|3145008_3145245_-	hypothetical protein	NA	A0A2H4JEE3	uncultured_Caudovirales_phage	50.7	1.5e-13
WP_100450386.1|3145247_3145814_-	crossover junction endodeoxyribonuclease	NA	NA	NA	NA	NA
WP_165710862.1|3145816_3146107_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165710864.1|3146103_3146568_-	hypothetical protein	NA	E5AGF7	Erwinia_phage	33.1	1.2e-11
WP_165710866.1|3146570_3148016_-	replicative DNA helicase	NA	O80281	Escherichia_phage	43.3	7.9e-89
WP_165710868.1|3148012_3148882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032962298.1|3149060_3149423_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_165710870.1|3149686_3149887_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_165710872.1|3149979_3150651_+	helix-turn-helix transcriptional regulator	NA	A7Y8H7	Pseudomonas_virus	29.5	2.1e-12
WP_165710874.1|3150655_3151231_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710877.1|3151368_3151833_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710879.1|3151942_3152239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710881.1|3152228_3152621_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710883.1|3152769_3153297_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710885.1|3153371_3154121_+	ERF family protein	NA	A0A1B0VMB2	Pseudomonas_phage	47.1	2.0e-35
WP_165710887.1|3154124_3154742_+	YqaJ viral recombinase family protein	NA	A0A0K0MD53	Pseudoalteromonas_phage	30.4	2.4e-10
WP_165710889.1|3154738_3154954_+	hypothetical protein	NA	B7SYG4	Stenotrophomonas_phage	44.2	6.1e-06
WP_100437354.1|3154950_3155172_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710891.1|3155168_3156029_+	hypothetical protein	NA	A0A067XQE4	Caulobacter_phage	34.8	1.6e-28
WP_165710893.1|3156028_3156319_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710895.1|3156315_3156612_+	hypothetical protein	NA	B7SYG3	Stenotrophomonas_phage	42.9	1.9e-05
WP_165710897.1|3156608_3157322_+	hypothetical protein	NA	B7SYG2	Stenotrophomonas_phage	30.2	3.7e-07
WP_165710899.1|3157318_3157519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710901.1|3157511_3157664_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165710903.1|3157656_3158208_+	adenine methyltransferase	NA	A0A166Y0E3	Gordonia_phage	60.8	1.2e-48
WP_087786648.1|3158219_3158432_+	DUF4224 domain-containing protein	NA	C8CLF5	Xylella_phage	61.5	2.5e-12
WP_165711289.1|3158431_3159460_+|integrase	tyrosine-type recombinase/integrase	integrase	C8CLF4	Xylella_phage	56.7	2.1e-99
WP_044570756.1|3159774_3160731_+	hypothetical protein	NA	NA	NA	NA	NA
3159520:3159568	attR	ATGGTGGGCCGTGAAGGATTCGAACCTTCGACCAAAAGATTAAAAGTCT	NA	NA	NA	NA
WP_012481067.1|3160915_3161581_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2I7S903	Vibrio_phage	35.9	4.1e-24
WP_012481068.1|3161659_3162361_-	7-carboxy-7-deazaguanine synthase QueE	NA	J9PV61	Bacillus_phage	41.9	4.0e-38
>prophage 6
NZ_CP049956	Stenotrophomonas maltophilia strain NCTC10498 chromosome, complete genome	4928653	3697167	3716738	4928653	tail,integrase	Cronobacter_phage(30.0%)	17	3690422:3690436	3708555:3708569
3690422:3690436	attL	GCCAGCAGCCTGAGC	NA	NA	NA	NA
WP_165711032.1|3697167_3698382_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	B7SYF8	Stenotrophomonas_phage	47.4	1.8e-102
WP_165711033.1|3698836_3700102_+|integrase	integrase family protein	integrase	NA	NA	NA	NA
WP_165711034.1|3700440_3701457_-	hypothetical protein	NA	NA	NA	NA	NA
WP_164092867.1|3701741_3702224_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A218MND2	uncultured_virus	41.8	6.0e-17
WP_165711035.1|3702207_3703458_+	Y-family DNA polymerase	NA	F1C5A5	Cronobacter_phage	45.4	4.4e-88
WP_165711036.1|3703530_3703962_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165711037.1|3704501_3705434_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165711038.1|3705484_3706228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_065183267.1|3706227_3706575_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165711039.1|3706613_3710120_-	host specificity protein J	NA	A0A2R3UA88	Siphoviridae_environmental_samples	60.9	0.0e+00
3708555:3708569	attR	GCTCAGGCTGCTGGC	NA	NA	NA	NA
WP_165711040.1|3710116_3710734_-|tail	tail assembly protein	tail	F1C572	Cronobacter_phage	50.5	3.2e-47
WP_165711041.1|3710726_3711467_-	peptidase P60	NA	A0A2R3UAR4	Siphoviridae_environmental_samples	60.7	1.8e-84
WP_165711042.1|3711558_3712251_-|tail	phage minor tail protein L	tail	A0A2R3UA90	Siphoviridae_environmental_samples	59.7	3.1e-83
WP_165711043.1|3712247_3712718_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165711044.1|3712719_3713559_-	hypothetical protein	NA	I7H419	Xanthomonas_virus	47.3	9.1e-05
WP_165711045.1|3713568_3713916_-|tail	phage tail protein	tail	I6PBN7	Cronobacter_phage	37.9	1.0e-10
WP_165711046.1|3713966_3716738_-|tail	phage tail tape measure protein	tail	A5H1M1	Xanthomonas_virus	28.6	4.6e-69
>prophage 7
NZ_CP049956	Stenotrophomonas maltophilia strain NCTC10498 chromosome, complete genome	4928653	3721534	3734987	4928653	terminase,portal	Pseudomonas_phage(20.0%)	18	NA	NA
WP_165711293.1|3721534_3722839_-	S49 family peptidase	NA	Q75QM8	Wolbachia_phage	38.9	5.2e-39
WP_165711051.1|3722885_3724367_-|portal	phage portal protein	portal	A0A2H4JFL5	uncultured_Caudovirales_phage	47.8	3.6e-105
WP_049461274.1|3724359_3724575_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165711294.1|3724576_3726637_-|terminase	terminase	terminase	A5LH27	Enterobacteria_phage	41.7	1.7e-145
WP_008265668.1|3726638_3727142_-	DUF1441 family protein	NA	A0A219Y9N2	Aeromonas_phage	38.7	1.2e-23
WP_165711052.1|3727335_3727623_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165711053.1|3727624_3728107_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031270409.1|3728103_3728559_-	hypothetical protein	NA	K7ZPX3	Xanthomonas_citri_phage	38.3	1.7e-13
WP_165711054.1|3728555_3729044_-	glycoside hydrolase family 104 protein	NA	D5LH07	Escherichia_phage	81.2	3.6e-70
WP_165711055.1|3729559_3730204_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165711056.1|3730227_3730989_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165711057.1|3730988_3731141_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165711058.1|3731137_3732886_-	DEAD/DEAH box helicase	NA	A0A0U1UNQ7	Pseudomonas_phage	77.6	8.8e-268
WP_165711295.1|3732885_3733260_-	hypothetical protein	NA	A0A0U1UNQ6	Pseudomonas_phage	62.6	5.2e-37
WP_165711059.1|3733316_3733682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165711060.1|3733681_3733906_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165711061.1|3733902_3734697_-	DNA-binding protein	NA	A0A1W6JP13	Morganella_phage	48.1	5.4e-23
WP_053494466.1|3734693_3734987_-	hypothetical protein	NA	H2DE79	Erwinia_phage	61.6	9.2e-29
>prophage 8
NZ_CP049956	Stenotrophomonas maltophilia strain NCTC10498 chromosome, complete genome	4928653	4907461	4918591	4928653		Enterobacteria_phage(42.86%)	8	NA	NA
WP_012479083.1|4907461_4908517_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	46.2	2.4e-79
WP_012479084.1|4908531_4909419_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	58.9	9.7e-98
WP_012479085.1|4909415_4909973_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	51.1	5.4e-46
WP_165711254.1|4909969_4910875_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	37.5	1.1e-27
WP_143568537.1|4911067_4912363_+	hypothetical protein	NA	NA	NA	NA	NA
WP_165711255.1|4912415_4913819_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	28.1	1.0e-40
WP_165711256.1|4913830_4915177_-	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	26.6	2.9e-29
WP_012479090.1|4915273_4918591_-	DEAD/DEAH box helicase	NA	A0A0P0YNJ0	Yellowstone_lake_phycodnavirus	34.7	1.1e-45
