assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	1	359706-359792	1	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	AGATGGGGAAAACAACGCCATATC	24	1	1	359730-359768	NZ_AP022557.1_2177464-2177426	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA	NA|209aa|up_9|NZ_AP022557.1_351341_351968_+	pfam07423, DUF1510, Protein of unknown function (DUF1510)	NA|70aa|up_8|NZ_AP022557.1_352039_352249_-	pfam10750, DUF2536, Protein of unknown function (DUF2536)	NA|216aa|up_7|NZ_AP022557.1_352441_353089_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|235aa|up_6|NZ_AP022557.1_353104_353809_+	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA|309aa|up_5|NZ_AP022557.1_353837_354764_+	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase	NA|378aa|up_4|NZ_AP022557.1_354763_355897_+	PRK07671, PRK07671, bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA|83aa|up_3|NZ_AP022557.1_355958_356207_+	pfam14143, YrhC, YrhC-like protein	NA|48aa|up_2|NZ_AP022557.1_356697_356841_+	pfam09501, Bac_small_YrzI, Probable sporulation protein (Bac_small_yrzI)	NA|238aa|up_1|NZ_AP022557.1_357311_358025_+	PRK05803, PRK05803, RNA polymerase sporulation sigma factor SigK	NA|423aa|up_0|NZ_AP022557.1_358319_359588_+	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional	NA|198aa|down_0|NZ_AP022557.1_359881_360475_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|342aa|down_1|NZ_AP022557.1_360577_361603_+	TIGR02872, UPF0118_membrane_protein_YtvI, sporulation integral membrane protein YtvI	NA|261aa|down_2|NZ_AP022557.1_361931_362714_-	PRK07734, motB, flagellar motor protein MotB; Reviewed	NA|267aa|down_3|NZ_AP022557.1_362706_363507_-	PRK08124, PRK08124, flagellar motor protein MotA; Validated	NA|180aa|down_4|NZ_AP022557.1_363677_364217_-	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism]	NA|280aa|down_5|NZ_AP022557.1_364341_365181_+	PRK03140, PRK03140, phosphatidylserine decarboxylase; Provisional	NA|47aa|down_6|NZ_AP022557.1_365833_365974_-	pfam08970, Sda, Sporulation inhibitor A	NA|172aa|down_7|NZ_AP022557.1_366312_366828_+	COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only]	NA|370aa|down_8|NZ_AP022557.1_366830_367940_+	PRK13796, PRK13796, GTPase YqeH; Provisional	NA|277aa|down_9|NZ_AP022557.1_367962_368793_+	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	2	365316-365410	2	CRISPRCasFinder	no	c2c9_V-U4	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Type V-U4	CACGGTAAGTTCCGTGGGCAGCG	23	0	0	NA	NA	NA	1	1	TypeV-U4	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA	NA|83aa|up_9|NZ_AP022557.1_355958_356207_+	pfam14143, YrhC, YrhC-like protein	NA|48aa|up_8|NZ_AP022557.1_356697_356841_+	pfam09501, Bac_small_YrzI, Probable sporulation protein (Bac_small_yrzI)	NA|238aa|up_7|NZ_AP022557.1_357311_358025_+	PRK05803, PRK05803, RNA polymerase sporulation sigma factor SigK	NA|423aa|up_6|NZ_AP022557.1_358319_359588_+	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional	NA|198aa|up_5|NZ_AP022557.1_359881_360475_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|342aa|up_4|NZ_AP022557.1_360577_361603_+	TIGR02872, UPF0118_membrane_protein_YtvI, sporulation integral membrane protein YtvI	NA|261aa|up_3|NZ_AP022557.1_361931_362714_-	PRK07734, motB, flagellar motor protein MotB; Reviewed	NA|267aa|up_2|NZ_AP022557.1_362706_363507_-	PRK08124, PRK08124, flagellar motor protein MotA; Validated	NA|180aa|up_1|NZ_AP022557.1_363677_364217_-	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism]	NA|280aa|up_0|NZ_AP022557.1_364341_365181_+	PRK03140, PRK03140, phosphatidylserine decarboxylase; Provisional	NA|47aa|down_0|NZ_AP022557.1_365833_365974_-	pfam08970, Sda, Sporulation inhibitor A	NA|172aa|down_1|NZ_AP022557.1_366312_366828_+	COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only]	NA|370aa|down_2|NZ_AP022557.1_366830_367940_+	PRK13796, PRK13796, GTPase YqeH; Provisional	NA|277aa|down_3|NZ_AP022557.1_367962_368793_+	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed	NA|98aa|down_4|NZ_AP022557.1_368796_369090_+	COG1534, COG1534, Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Translation, ribosomal structure and biogenesis]	NA|217aa|down_5|NZ_AP022557.1_369274_369925_+	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase	NA|190aa|down_6|NZ_AP022557.1_369833_370403_+	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism]	NA|119aa|down_7|NZ_AP022557.1_370408_370765_+	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown]	NA|248aa|down_8|NZ_AP022557.1_370761_371505_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|373aa|down_9|NZ_AP022557.1_372098_373217_+	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane]
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	3	459375-459460	3	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	GTCTTTCCATGTTGCGGAGCCGC	23	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA	NA|81aa|up_9|NZ_AP022557.1_453642_453885_-	pfam11117, DUF2626, Protein of unknown function (DUF2626)	NA|230aa|up_8|NZ_AP022557.1_454021_454711_-	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|387aa|up_7|NZ_AP022557.1_454819_455980_+	COG2804, PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]	NA|343aa|up_6|NZ_AP022557.1_455976_457005_+	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]	NA|99aa|up_5|NZ_AP022557.1_457175_457472_+	COG4537, ComGC, Competence protein ComGC [Intracellular trafficking and secretion]	NA|148aa|up_4|NZ_AP022557.1_457455_457899_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|109aa|up_3|NZ_AP022557.1_457882_458209_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|161aa|up_2|NZ_AP022557.1_458145_458628_+	pfam15980, ComGF, Putative Competence protein ComGF	NA|130aa|up_1|NZ_AP022557.1_458682_459072_+	pfam14173, ComGG, ComG operon protein 7	NA|61aa|up_0|NZ_AP022557.1_459112_459295_+	pfam14038, YqzE, YqzE-like protein	NA|265aa|down_0|NZ_AP022557.1_459468_460263_-	pfam11079, YqhG, Bacterial protein YqhG of unknown function	NA|555aa|down_1|NZ_AP022557.1_460249_461914_-	cd18011, DEXDc_RapA, DEXH-box helicase domain of RapA	NA|365aa|down_2|NZ_AP022557.1_462405_463500_+	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT	NA|449aa|down_3|NZ_AP022557.1_463535_464882_+	PRK00451, PRK00451, aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA|491aa|down_4|NZ_AP022557.1_464874_466347_+	PRK04366, PRK04366, aminomethyl-transferring glycine dehydrogenase subunit GcvPB	NA|405aa|down_5|NZ_AP022557.1_466656_467871_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|125aa|down_6|NZ_AP022557.1_467984_468359_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|279aa|down_7|NZ_AP022557.1_468550_469387_+	COG0095, LplA, Lipoate-protein ligase A [Coenzyme metabolism]	NA|108aa|down_8|NZ_AP022557.1_471231_471555_+	pfam14528, LAGLIDADG_3, LAGLIDADG-like domain	NA|471aa|down_9|NZ_AP022557.1_473535_474948_+	cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in  bacterial endospore germination
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	4	553121-553209	4	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	CGTCTAGTTTTATAACGCTGCCAT	24	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|65aa|up_8|NZ_AP022557.1_542049_542244_+,NA|61aa|up_6|NZ_AP022557.1_544171_544354_-,NA|183aa|up_5|NZ_AP022557.1_544368_544917_-,NA|642aa|up_4|NZ_AP022557.1_546139_548065_-,NA	NA|158aa|up_9|NZ_AP022557.1_541371_541845_+	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]	NA|65aa|up_8|NZ_AP022557.1_542049_542244_+	NA	NA|470aa|up_7|NZ_AP022557.1_542623_544033_+	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|61aa|up_6|NZ_AP022557.1_544171_544354_-	NA	NA|183aa|up_5|NZ_AP022557.1_544368_544917_-	NA	NA|642aa|up_4|NZ_AP022557.1_546139_548065_-	NA	NA|252aa|up_3|NZ_AP022557.1_548061_548817_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|335aa|up_2|NZ_AP022557.1_548910_549915_-	cd16948, HATPase_BceS-YxdK-YvcQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis BceS, YxdK, and Bacillus thuringiensis YvcQ	NA|230aa|up_1|NZ_AP022557.1_549911_550601_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|604aa|up_0|NZ_AP022557.1_551208_553020_+	COG3391, COG3391, Uncharacterized conserved protein [Function unknown]	NA|456aa|down_0|NZ_AP022557.1_553275_554643_+	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|139aa|down_1|NZ_AP022557.1_554687_555104_-	cd18683, PIN_VapC-like, Uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily	NA|104aa|down_2|NZ_AP022557.1_555104_555416_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|206aa|down_3|NZ_AP022557.1_555638_556256_-	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|504aa|down_4|NZ_AP022557.1_556551_558063_-	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|308aa|down_5|NZ_AP022557.1_558377_559301_+	TIGR02651, Ribonuclease_Z, ribonuclease Z	NA|341aa|down_6|NZ_AP022557.1_559297_560320_-	PRK13523, PRK13523, NADPH dehydrogenase NamA; Provisional	NA|280aa|down_7|NZ_AP022557.1_560591_561431_-	PRK07679, PRK07679, pyrroline-5-carboxylate reductase; Reviewed	NA|324aa|down_8|NZ_AP022557.1_561941_562913_+	cd07725, TTHA1429-like_MBL-fold, uncharacterized Thermus thermophilus TTHA1429 and related proteins; MBL-fold metallo hydrolase domain	NA|263aa|down_9|NZ_AP022557.1_562903_563692_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	5	593949-594040	5	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	ACGGGCCATATGGTCGGCCATGAGC	25	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|131aa|up_0|NZ_AP022557.1_593335_593728_+,NA	NA|147aa|up_9|NZ_AP022557.1_586131_586572_+	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|367aa|up_8|NZ_AP022557.1_587076_588177_+	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD	NA|216aa|up_7|NZ_AP022557.1_588176_588824_+	PRK09289, PRK09289, riboflavin synthase	NA|398aa|up_6|NZ_AP022557.1_588851_590045_+	PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA|155aa|up_5|NZ_AP022557.1_590063_590528_+	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|119aa|up_4|NZ_AP022557.1_590639_590996_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|171aa|up_3|NZ_AP022557.1_591036_591549_-	pfam03745, DUF309, Domain of unknown function (DUF309)	NA|252aa|up_2|NZ_AP022557.1_591758_592514_+	PRK00104, scpA, segregation and condensation protein A; Reviewed	NA|209aa|up_1|NZ_AP022557.1_592659_593286_+	PRK00135, scpB, segregation and condensation protein B; Reviewed	NA|131aa|up_0|NZ_AP022557.1_593335_593728_+	NA	NA|419aa|down_0|NZ_AP022557.1_594334_595591_+	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|372aa|down_1|NZ_AP022557.1_595907_597023_+	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|199aa|down_2|NZ_AP022557.1_597015_597612_+	COG2715, SpmA, Uncharacterized membrane protein, required for spore maturation in B	NA|178aa|down_3|NZ_AP022557.1_597611_598145_+	COG0700, SpmB, Uncharacterized membrane protein [Function unknown]	NA|244aa|down_4|NZ_AP022557.1_598263_598995_+	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|175aa|down_5|NZ_AP022557.1_599258_599783_+	PRK03147, PRK03147, thiol-disulfide oxidoreductase ResA	NA|553aa|down_6|NZ_AP022557.1_599796_601455_+	COG1333, ResB, ResB protein required for cytochrome c biosynthesis [Posttranslational modification, protein turnover, chaperones]	NA|396aa|down_7|NZ_AP022557.1_601441_602629_+	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|242aa|down_8|NZ_AP022557.1_602723_603449_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|598aa|down_9|NZ_AP022557.1_603448_605242_+	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	6	851068-851166	6	CRISPRCasFinder	no	DinG	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Type IV-A	GGGGCAAGTGAACCAAGTACGGCTAGGAG	29	1	1	851097-851137	NZ_AP022557.1_3178641-3178601	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA|115aa|down_5|NZ_AP022557.1_866169_866514_-	NA|213aa|up_9|NZ_AP022557.1_836810_837449_+	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|265aa|up_8|NZ_AP022557.1_837955_838750_+	TIGR03234, OH-pyruv-isom, hydroxypyruvate isomerase	NA|299aa|up_7|NZ_AP022557.1_838746_839643_+	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]	NA|441aa|up_6|NZ_AP022557.1_839892_841215_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|454aa|up_5|NZ_AP022557.1_841214_842576_+	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|483aa|up_4|NZ_AP022557.1_842572_844021_+	PRK11230, PRK11230, glycolate oxidase subunit GlcD; Provisional	NA|728aa|up_3|NZ_AP022557.1_844128_846312_+	PRK02999, PRK02999, malate synthase G; Provisional	NA|406aa|up_2|NZ_AP022557.1_846484_847702_+	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|262aa|up_1|NZ_AP022557.1_847829_848615_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|759aa|up_0|NZ_AP022557.1_848739_851016_+	COG1205, COG1205, Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only]	NA|432aa|down_0|NZ_AP022557.1_851394_852690_+	COG3359, COG3359, Predicted exonuclease [DNA replication, recombination, and repair]	NA|84aa|down_1|NZ_AP022557.1_853038_853290_+	pfam11122, Spore-coat_CotD, Inner spore coat protein D	NA|99aa|down_2|NZ_AP022557.1_854028_854325_+	PRK14127, PRK14127, cell division regulator GpsB	NA|379aa|down_3|NZ_AP022557.1_854968_856105_+	COG0116, COG0116, Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|274aa|down_4|NZ_AP022557.1_859034_859856_-	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|115aa|down_5|NZ_AP022557.1_866169_866514_-	NA	NA|154aa|down_6|NZ_AP022557.1_866532_866994_-	pfam16219, DUF4879, Domain of unknown function (DUF4879)	NA|396aa|down_7|NZ_AP022557.1_867197_868385_+	pfam13546, DDE_5, DDE superfamily endonuclease	DinG|646aa|down_8|NZ_AP022557.1_868992_870930_+	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|501aa|down_9|NZ_AP022557.1_871047_872550_+	cd06460, M32_Taq, Peptidase family M32, which includes thermostable carboxypeptidases TaqCP, PfuCP and FisCP
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	7	889768-889861	7	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	GTTTTTGATGAATAAAGTAGCTAGTAGGCT	30	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|50aa|up_9|NZ_AP022557.1_886351_886501_+,NA|44aa|up_7|NZ_AP022557.1_887257_887389_+,NA|105aa|up_3|NZ_AP022557.1_888395_888710_+,NA|49aa|up_0|NZ_AP022557.1_889601_889748_+,NA|151aa|down_3|NZ_AP022557.1_893639_894092_+,NA|216aa|down_6|NZ_AP022557.1_896487_897135_+,NA|106aa|down_9|NZ_AP022557.1_898852_899170_+	NA|50aa|up_9|NZ_AP022557.1_886351_886501_+	NA	NA|174aa|up_8|NZ_AP022557.1_886613_887135_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|44aa|up_7|NZ_AP022557.1_887257_887389_+	NA	NA|48aa|up_6|NZ_AP022557.1_887444_887588_+	PRK09398, sspN, acid-soluble spore protein N; Provisional	NA|76aa|up_5|NZ_AP022557.1_887617_887845_+	PRK03830, PRK03830, small acid-soluble spore protein Tlp; Provisional	NA|139aa|up_4|NZ_AP022557.1_887964_888381_+	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|105aa|up_3|NZ_AP022557.1_888395_888710_+	NA	NA|136aa|up_2|NZ_AP022557.1_888706_889114_+	TIGR00369, Putative_esterase, uncharacterized domain 1	NA|97aa|up_1|NZ_AP022557.1_889138_889429_-	COG4841, COG4841, Uncharacterized protein conserved in bacteria [Function unknown]	NA|49aa|up_0|NZ_AP022557.1_889601_889748_+	NA	NA|313aa|down_0|NZ_AP022557.1_890106_891045_+	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family	NA|198aa|down_1|NZ_AP022557.1_891220_891814_-	COG2928, COG2928, Uncharacterized conserved protein [Function unknown]	NA|480aa|down_2|NZ_AP022557.1_891988_893428_+	COG2509, COG2509, Uncharacterized FAD-dependent dehydrogenases [General function prediction only]	NA|151aa|down_3|NZ_AP022557.1_893639_894092_+	NA	NA|338aa|down_4|NZ_AP022557.1_894838_895852_+	PRK06256, PRK06256, biotin synthase; Validated	NA|78aa|down_5|NZ_AP022557.1_896100_896334_+	PRK13672, PRK13672, hypothetical protein; Provisional	NA|216aa|down_6|NZ_AP022557.1_896487_897135_+	NA	NA|60aa|down_7|NZ_AP022557.1_897358_897538_+	pfam14162, YozD, YozD-like protein	NA|369aa|down_8|NZ_AP022557.1_897586_898693_-	pfam10720, DUF2515, Protein of unknown function (DUF2515)	NA|106aa|down_9|NZ_AP022557.1_898852_899170_+	NA
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	8	959192-959283	8	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	TCACCACAATATGGACTTGACAGAC	25	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|57aa|up_8|NZ_AP022557.1_949644_949815_+,NA|102aa|down_1|NZ_AP022557.1_961232_961538_+,NA|157aa|down_5|NZ_AP022557.1_964376_964847_-,NA|255aa|down_6|NZ_AP022557.1_964861_965626_-,NA|188aa|down_9|NZ_AP022557.1_968218_968782_+	NA|148aa|up_9|NZ_AP022557.1_949208_949652_+	cd16936, HATPase_RsbW-like, Histidine kinase-like ATPase domain of RsbW, an anti sigma-B factor and serine-protein kinase involved in regulating sigma-B during stress in Bacilli, and related domains	NA|57aa|up_8|NZ_AP022557.1_949644_949815_+	NA	NA|149aa|up_7|NZ_AP022557.1_949814_950261_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|579aa|up_6|NZ_AP022557.1_950755_952492_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|600aa|up_5|NZ_AP022557.1_952475_954275_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|216aa|up_4|NZ_AP022557.1_954378_955026_-	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|335aa|up_3|NZ_AP022557.1_955030_956035_-	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|188aa|up_2|NZ_AP022557.1_956230_956794_+	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|130aa|up_1|NZ_AP022557.1_957052_957442_+	pfam06094, GGACT, Gamma-glutamyl cyclotransferase, AIG2-like	NA|453aa|up_0|NZ_AP022557.1_957667_959026_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|295aa|down_0|NZ_AP022557.1_959493_960378_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|102aa|down_1|NZ_AP022557.1_961232_961538_+	NA	NA|264aa|down_2|NZ_AP022557.1_961553_962345_+	cd04506, SGNH_hydrolase_YpmR_like, Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases	NA|305aa|down_3|NZ_AP022557.1_962344_963259_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|327aa|down_4|NZ_AP022557.1_963251_964232_+	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only]	NA|157aa|down_5|NZ_AP022557.1_964376_964847_-	NA	NA|255aa|down_6|NZ_AP022557.1_964861_965626_-	NA	NA|250aa|down_7|NZ_AP022557.1_966420_967170_+	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA	NA|197aa|down_8|NZ_AP022557.1_967541_968132_-	pfam13977, TetR_C_6, BetI-type transcriptional repressor, C-terminal	NA|188aa|down_9|NZ_AP022557.1_968218_968782_+	NA
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	9	1045661-1045761	9	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	CTGCAAGGGTTTTCTATTTAAGAAATAGT	29	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA|557aa|down_1|NZ_AP022557.1_1046696_1048367_-,NA|89aa|down_2|NZ_AP022557.1_1050360_1050627_-	NA|238aa|up_9|NZ_AP022557.1_1030237_1030951_-	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B	NA|564aa|up_8|NZ_AP022557.1_1030973_1032665_-	TIGR02403, Trehalose-6-phosphate_hydrolase, alpha,alpha-phosphotrehalase	NA|472aa|up_7|NZ_AP022557.1_1032776_1034192_-	TIGR01992, phosphotransferase_system_trehalose_permease, PTS system, trehalose-specific IIBC component	NA|242aa|up_6|NZ_AP022557.1_1034589_1035315_+	cd04764, HTH_MlrA-like_sg1, Helix-Turn-Helix DNA binding domain of putative MlrA-like transcription regulators	NA|115aa|up_5|NZ_AP022557.1_1035838_1036183_-	pfam07238, PilZ, PilZ domain	NA|812aa|up_4|NZ_AP022557.1_1036185_1038621_-	PRK05561, PRK05561, DNA topoisomerase 4 subunit A	NA|646aa|up_3|NZ_AP022557.1_1038677_1040615_-	TIGR01058, DNA_topoisomerase_4_subunit_B, DNA topoisomerase IV, B subunit, Gram-positive	NA|140aa|up_2|NZ_AP022557.1_1040775_1041195_-	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|559aa|up_1|NZ_AP022557.1_1041632_1043309_-	COG0661, AarF, Predicted unusual protein kinase [General function prediction only]	NA|100aa|up_0|NZ_AP022557.1_1043360_1043660_-	COG3937, COG3937, Uncharacterized conserved protein [Function unknown]	NA|211aa|down_0|NZ_AP022557.1_1045878_1046511_+	pfam09997, DUF2238, Predicted membrane protein (DUF2238)	NA|557aa|down_1|NZ_AP022557.1_1046696_1048367_-	NA	NA|89aa|down_2|NZ_AP022557.1_1050360_1050627_-	NA	NA|751aa|down_3|NZ_AP022557.1_1050623_1052876_-	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|96aa|down_4|NZ_AP022557.1_1052973_1053261_-	sd00006, TPR, Tetratricopeptide repeat	NA|194aa|down_5|NZ_AP022557.1_1053395_1053977_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|216aa|down_6|NZ_AP022557.1_1054444_1055092_-	PRK13197, PRK13197, pyrrolidone-carboxylate peptidase; Provisional	NA|320aa|down_7|NZ_AP022557.1_1055124_1056084_-	pfam06166, DUF979, Protein of unknown function (DUF979)	NA|229aa|down_8|NZ_AP022557.1_1056084_1056771_-	pfam06149, DUF969, Protein of unknown function (DUF969)	NA|206aa|down_9|NZ_AP022557.1_1057315_1057933_+	cd02109, arch_bact_SO_family_Moco, bacterial and archael members of the sulfite oxidase (SO) family of molybdopterin binding domains
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	10	1358968-1359063	10	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	GATTTTCATCCTTGGGTGGAGGGCA	25	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA	NA|389aa|up_9|NZ_AP022557.1_1346773_1347940_-	PRK05590, PRK05590, hypothetical protein; Provisional	NA|139aa|up_8|NZ_AP022557.1_1348251_1348668_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|132aa|up_7|NZ_AP022557.1_1349456_1349852_+	PRK13953, mscL, large conductance mechanosensitive channel protein MscL	NA|443aa|up_6|NZ_AP022557.1_1350156_1351485_-	COG3314, COG3314, Uncharacterized protein conserved in bacteria [Function unknown]	NA|425aa|up_5|NZ_AP022557.1_1351581_1352856_-	PRK09356, PRK09356, imidazolonepropionase; Validated	NA|554aa|up_4|NZ_AP022557.1_1352871_1354533_-	PRK05414, PRK05414, urocanate hydratase; Provisional	NA|496aa|up_3|NZ_AP022557.1_1354695_1356183_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|333aa|up_2|NZ_AP022557.1_1356257_1357256_-	cd09988, Formimidoylglutamase, Formimidoylglutamase or HutE	NA|139aa|up_1|NZ_AP022557.1_1357400_1357817_+	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|161aa|up_0|NZ_AP022557.1_1358216_1358699_-	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	NA|128aa|down_0|NZ_AP022557.1_1359254_1359638_-	cd06587, VOC, vicinal oxygen chelate (VOC) family	NA|458aa|down_1|NZ_AP022557.1_1361288_1362662_+	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|595aa|down_2|NZ_AP022557.1_1363703_1365488_-	cd08510, PBP2_Lactococcal_OppA_like, The substrate binding component of an ABC-type lactococcal OppA-like transport system contains	NA|303aa|down_3|NZ_AP022557.1_1365500_1366409_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|323aa|down_4|NZ_AP022557.1_1366430_1367399_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|down_5|NZ_AP022557.1_1367415_1368342_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|342aa|down_6|NZ_AP022557.1_1368328_1369354_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|497aa|down_7|NZ_AP022557.1_1369656_1371147_-	PRK00047, glpK, glycerol kinase GlpK	NA|273aa|down_8|NZ_AP022557.1_1371214_1372033_-	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]	NA|479aa|down_9|NZ_AP022557.1_1372765_1374202_+	pfam13610, DDE_Tnp_IS240, DDE domain
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	11	1422324-1422414	11	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	CTTGCCGCTCGTCCGTATATTCCTG	25	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA	NA|158aa|up_9|NZ_AP022557.1_1412622_1413096_-	pfam07301, DUF1453, Protein of unknown function (DUF1453)	NA|119aa|up_8|NZ_AP022557.1_1413217_1413574_-	cd17542, REC_CheY, phosphoacceptor receiver (REC) domain of chemotaxis protein CheY	NA|236aa|up_7|NZ_AP022557.1_1413679_1414387_-	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region	NA|60aa|up_6|NZ_AP022557.1_1414744_1414924_+	pfam09388, SpoOE-like, Spo0E like sporulation regulatory protein	NA|593aa|up_5|NZ_AP022557.1_1415009_1416788_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|588aa|up_4|NZ_AP022557.1_1416784_1418548_-	PRK10789, PRK10789, SmdA family multidrug ABC transporter permease/ATP-binding protein	NA|71aa|up_3|NZ_AP022557.1_1418670_1418883_-	PRK01844, PRK01844, YneF family protein	NA|146aa|up_2|NZ_AP022557.1_1418973_1419411_-	pfam10747, SirA, Sporulation inhibitor of replication protein SirA	NA|669aa|up_1|NZ_AP022557.1_1419840_1421847_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|77aa|up_0|NZ_AP022557.1_1421964_1422195_-	pfam05979, DUF896, Bacterial protein of unknown function (DUF896)	NA|102aa|down_0|NZ_AP022557.1_1423051_1423357_-	PRK14125, PRK14125, cell division suppressor protein YneA; Provisional	NA|208aa|down_1|NZ_AP022557.1_1423508_1424132_+	PRK00215, PRK00215, transcriptional repressor LexA	NA|445aa|down_2|NZ_AP022557.1_1424628_1425963_-	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I	NA|134aa|down_3|NZ_AP022557.1_1426002_1426404_-	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|424aa|down_4|NZ_AP022557.1_1426480_1427752_-	pfam06838, Met_gamma_lyase, Methionine gamma-lyase	NA|415aa|down_5|NZ_AP022557.1_1427768_1429013_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|205aa|down_6|NZ_AP022557.1_1429278_1429893_+	COG2860, COG2860, Predicted membrane protein [Function unknown]	NA|293aa|down_7|NZ_AP022557.1_1429985_1430864_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|384aa|down_8|NZ_AP022557.1_1431006_1432158_-	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|24aa|down_9|NZ_AP022557.1_1432353_1432425_-	PRK05808, PRK05808, 3-hydroxybutyryl-CoA dehydrogenase; Validated
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	12	1424377-1424505	12	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	GGCACAACCAATCATGGGCCGGAAGCACCGGTACGTATATAAAAGAGG	48	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA	NA|236aa|up_9|NZ_AP022557.1_1413679_1414387_-	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region	NA|60aa|up_8|NZ_AP022557.1_1414744_1414924_+	pfam09388, SpoOE-like, Spo0E like sporulation regulatory protein	NA|593aa|up_7|NZ_AP022557.1_1415009_1416788_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|588aa|up_6|NZ_AP022557.1_1416784_1418548_-	PRK10789, PRK10789, SmdA family multidrug ABC transporter permease/ATP-binding protein	NA|71aa|up_5|NZ_AP022557.1_1418670_1418883_-	PRK01844, PRK01844, YneF family protein	NA|146aa|up_4|NZ_AP022557.1_1418973_1419411_-	pfam10747, SirA, Sporulation inhibitor of replication protein SirA	NA|669aa|up_3|NZ_AP022557.1_1419840_1421847_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|77aa|up_2|NZ_AP022557.1_1421964_1422195_-	pfam05979, DUF896, Bacterial protein of unknown function (DUF896)	NA|102aa|up_1|NZ_AP022557.1_1423051_1423357_-	PRK14125, PRK14125, cell division suppressor protein YneA; Provisional	NA|208aa|up_0|NZ_AP022557.1_1423508_1424132_+	PRK00215, PRK00215, transcriptional repressor LexA	NA|445aa|down_0|NZ_AP022557.1_1424628_1425963_-	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I	NA|134aa|down_1|NZ_AP022557.1_1426002_1426404_-	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|424aa|down_2|NZ_AP022557.1_1426480_1427752_-	pfam06838, Met_gamma_lyase, Methionine gamma-lyase	NA|415aa|down_3|NZ_AP022557.1_1427768_1429013_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|205aa|down_4|NZ_AP022557.1_1429278_1429893_+	COG2860, COG2860, Predicted membrane protein [Function unknown]	NA|293aa|down_5|NZ_AP022557.1_1429985_1430864_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|384aa|down_6|NZ_AP022557.1_1431006_1432158_-	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|24aa|down_7|NZ_AP022557.1_1432353_1432425_-	PRK05808, PRK05808, 3-hydroxybutyryl-CoA dehydrogenase; Validated	NA|540aa|down_8|NZ_AP022557.1_1432681_1434301_-	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	NA|358aa|down_9|NZ_AP022557.1_1434304_1435378_-	COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion]
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	13	1432283-1432375	13	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	CTGTTCATGTTGTATACGTATAGAAC	26	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA	NA|77aa|up_9|NZ_AP022557.1_1421964_1422195_-	pfam05979, DUF896, Bacterial protein of unknown function (DUF896)	NA|102aa|up_8|NZ_AP022557.1_1423051_1423357_-	PRK14125, PRK14125, cell division suppressor protein YneA; Provisional	NA|208aa|up_7|NZ_AP022557.1_1423508_1424132_+	PRK00215, PRK00215, transcriptional repressor LexA	NA|445aa|up_6|NZ_AP022557.1_1424628_1425963_-	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I	NA|134aa|up_5|NZ_AP022557.1_1426002_1426404_-	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|424aa|up_4|NZ_AP022557.1_1426480_1427752_-	pfam06838, Met_gamma_lyase, Methionine gamma-lyase	NA|415aa|up_3|NZ_AP022557.1_1427768_1429013_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|205aa|up_2|NZ_AP022557.1_1429278_1429893_+	COG2860, COG2860, Predicted membrane protein [Function unknown]	NA|293aa|up_1|NZ_AP022557.1_1429985_1430864_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|384aa|up_0|NZ_AP022557.1_1431006_1432158_-	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|540aa|down_0|NZ_AP022557.1_1432681_1434301_-	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	NA|358aa|down_1|NZ_AP022557.1_1434304_1435378_-	COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion]	NA|382aa|down_2|NZ_AP022557.1_1435393_1436539_-	cd01160, LCAD, Long chain acyl-CoA dehydrogenase	NA|525aa|down_3|NZ_AP022557.1_1436563_1438138_-	PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated	NA|311aa|down_4|NZ_AP022557.1_1438337_1439270_-	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K	NA|76aa|down_5|NZ_AP022557.1_1439969_1440197_-	pfam17209, Hfq, Hfq protein	NA|315aa|down_6|NZ_AP022557.1_1440233_1441178_-	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|566aa|down_7|NZ_AP022557.1_1441617_1443315_-	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|450aa|down_8|NZ_AP022557.1_1443644_1444994_-	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|507aa|down_9|NZ_AP022557.1_1445188_1446709_+	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	14	1667300-1667396	14	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	CTTGCATGCTTCATACTAAATGCATGGAGC	30	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA|63aa|down_6|NZ_AP022557.1_1673069_1673258_-,NA|130aa|down_7|NZ_AP022557.1_1673442_1673832_+	NA|736aa|up_9|NZ_AP022557.1_1657179_1659387_-	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|119aa|up_8|NZ_AP022557.1_1659393_1659750_-	COG4839, FtsL, Protein required for the initiation of cell division [Cell division and chromosome partitioning]	NA|311aa|up_7|NZ_AP022557.1_1659886_1660819_-	PRK00050, PRK00050, 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA|543aa|up_6|NZ_AP022557.1_1661097_1662726_-	TIGR03998, thiol_BshC, bacillithiol biosynthesis cysteine-adding enzyme BshC	NA|129aa|up_5|NZ_AP022557.1_1663173_1663560_-	pfam11877, DUF3397, Protein of unknown function (DUF3397)	NA|307aa|up_4|NZ_AP022557.1_1663552_1664473_-	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed	NA|192aa|up_3|NZ_AP022557.1_1664545_1665121_-	TIGR02894, DNA_bind_RsfA, transcription factor, RsfA family	NA|252aa|up_2|NZ_AP022557.1_1665194_1665950_-	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|58aa|up_1|NZ_AP022557.1_1666096_1666270_-	PRK12286, rpmF, 50S ribosomal protein L32; Reviewed	NA|181aa|up_0|NZ_AP022557.1_1666415_1666958_-	COG1399, COG1399, Predicted metal-binding, possibly nucleic acid-binding protein [General function prediction only]	NA|407aa|down_0|NZ_AP022557.1_1667488_1668709_+	PRK13670, PRK13670, nucleotidyltransferase	NA|340aa|down_1|NZ_AP022557.1_1668681_1669701_-	COG3480, SdrC, Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms]	NA|263aa|down_2|NZ_AP022557.1_1669697_1670486_-	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	NA|427aa|down_3|NZ_AP022557.1_1670571_1671852_+	TIGR02871, conserved_hypothetical_protein, sporulation integral membrane protein YlbJ	NA|169aa|down_4|NZ_AP022557.1_1671995_1672502_-	PRK00168, coaD, phosphopantetheine adenylyltransferase; Provisional	NA|199aa|down_5|NZ_AP022557.1_1672467_1673064_-	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95	NA|63aa|down_6|NZ_AP022557.1_1673069_1673258_-	NA	NA|130aa|down_7|NZ_AP022557.1_1673442_1673832_+	NA	NA|90aa|down_8|NZ_AP022557.1_1674237_1674507_-	PRK02886, PRK02886, hypothetical protein; Provisional	NA|149aa|down_9|NZ_AP022557.1_1674525_1674972_-	COG3679, COG3679, Regulatory protein involved in competence development and sporulation [Replication, recombination and repair;    Signal transduction mechanisms]
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	15	1671925-1672010	15	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	GCTGTCCGTCATCGCTGTGGCTC	23	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA|63aa|down_1|NZ_AP022557.1_1673069_1673258_-,NA|130aa|down_2|NZ_AP022557.1_1673442_1673832_+,NA|120aa|down_5|NZ_AP022557.1_1675295_1675655_-	NA|129aa|up_9|NZ_AP022557.1_1663173_1663560_-	pfam11877, DUF3397, Protein of unknown function (DUF3397)	NA|307aa|up_8|NZ_AP022557.1_1663552_1664473_-	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed	NA|192aa|up_7|NZ_AP022557.1_1664545_1665121_-	TIGR02894, DNA_bind_RsfA, transcription factor, RsfA family	NA|252aa|up_6|NZ_AP022557.1_1665194_1665950_-	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily	NA|58aa|up_5|NZ_AP022557.1_1666096_1666270_-	PRK12286, rpmF, 50S ribosomal protein L32; Reviewed	NA|181aa|up_4|NZ_AP022557.1_1666415_1666958_-	COG1399, COG1399, Predicted metal-binding, possibly nucleic acid-binding protein [General function prediction only]	NA|407aa|up_3|NZ_AP022557.1_1667488_1668709_+	PRK13670, PRK13670, nucleotidyltransferase	NA|340aa|up_2|NZ_AP022557.1_1668681_1669701_-	COG3480, SdrC, Predicted secreted protein containing a PDZ domain [Signal transduction mechanisms]	NA|263aa|up_1|NZ_AP022557.1_1669697_1670486_-	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	NA|427aa|up_0|NZ_AP022557.1_1670571_1671852_+	TIGR02871, conserved_hypothetical_protein, sporulation integral membrane protein YlbJ	NA|199aa|down_0|NZ_AP022557.1_1672467_1673064_-	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95	NA|63aa|down_1|NZ_AP022557.1_1673069_1673258_-	NA	NA|130aa|down_2|NZ_AP022557.1_1673442_1673832_+	NA	NA|90aa|down_3|NZ_AP022557.1_1674237_1674507_-	PRK02886, PRK02886, hypothetical protein; Provisional	NA|149aa|down_4|NZ_AP022557.1_1674525_1674972_-	COG3679, COG3679, Regulatory protein involved in competence development and sporulation [Replication, recombination and repair;    Signal transduction mechanisms]	NA|120aa|down_5|NZ_AP022557.1_1675295_1675655_-	NA	NA|78aa|down_6|NZ_AP022557.1_1675745_1675979_-	pfam14003, YlbE, YlbE-like protein	NA|128aa|down_7|NZ_AP022557.1_1675991_1676375_-	pfam14071, YlbD_coat, Putative coat protein	NA|336aa|down_8|NZ_AP022557.1_1676455_1677463_-	pfam14504, CAP_assoc_N, CAP-associated N-terminal	NA|142aa|down_9|NZ_AP022557.1_1677589_1678015_-	cd04622, CBS_pair_HRP1_like, CBS pair domain found in Hypoxic Response Protein 1 (HRP1) -like proteinds
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	16	1714334-1714429	16	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	CCTATTGTACCAAAAAATGCGGCCACTGAC	30	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|81aa|up_9|NZ_AP022557.1_1703850_1704093_-,NA|78aa|down_6|NZ_AP022557.1_1719363_1719597_-,NA|58aa|down_9|NZ_AP022557.1_1722234_1722408_+	NA|81aa|up_9|NZ_AP022557.1_1703850_1704093_-	NA	NA|471aa|up_8|NZ_AP022557.1_1704237_1705650_-	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed	NA|432aa|up_7|NZ_AP022557.1_1705654_1706950_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|326aa|up_6|NZ_AP022557.1_1707021_1707999_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|370aa|up_5|NZ_AP022557.1_1708002_1709112_-	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit	NA|185aa|up_4|NZ_AP022557.1_1709638_1710193_+	PRK00150, def, peptide deformylase; Reviewed	NA|259aa|up_3|NZ_AP022557.1_1710245_1711022_-	cd07517, HAD_HPP, phosphatase, similar to Bacteroides thetaiotaomicron VPI-5482 BT4131 hexose phosphate phosphatase; belongs to the haloacid dehalogenase-like superfamily	NA|72aa|up_2|NZ_AP022557.1_1711478_1711694_+	PRK13667, PRK13667, hypothetical protein; Provisional	NA|556aa|up_1|NZ_AP022557.1_1711690_1713358_+	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	NA|221aa|up_0|NZ_AP022557.1_1713630_1714293_-	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]	NA|81aa|down_0|NZ_AP022557.1_1715052_1715295_-	PRK03094, PRK03094, hypothetical protein; Provisional	NA|379aa|down_1|NZ_AP022557.1_1715340_1716477_-	cd05670, M20_Acy1_YkuR-like, M20 Peptidase aminoacyclase-1 YkuR-like proteins, including YkuR and Ama/HipO/HyuC proteins	NA|237aa|down_2|NZ_AP022557.1_1716535_1717246_-	TIGR03532, DapD_Ac, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA|291aa|down_3|NZ_AP022557.1_1717319_1718192_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|159aa|down_4|NZ_AP022557.1_1718289_1718766_-	cd04643, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria	NA|66aa|down_5|NZ_AP022557.1_1718867_1719065_-	pfam14156, AbbA_antirepres, Antirepressor AbbA	NA|78aa|down_6|NZ_AP022557.1_1719363_1719597_-	NA	NA|406aa|down_7|NZ_AP022557.1_1719647_1720865_-	pfam10388, YkuI_C, EAL-domain associated signalling protein domain	NA|256aa|down_8|NZ_AP022557.1_1721325_1722093_-	PRK07677, PRK07677, short chain dehydrogenase; Provisional	NA|58aa|down_9|NZ_AP022557.1_1722234_1722408_+	NA
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	17	1778479-1778574	17	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	CTTTACTCATCAATATCGCGCTTTTGCTTC	30	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|299aa|up_6|NZ_AP022557.1_1771304_1772201_-,NA|203aa|down_4|NZ_AP022557.1_1786995_1787604_+	NA|195aa|up_9|NZ_AP022557.1_1768883_1769468_+	TIGR02869, Spore_cortex-lytic_enzyme, spore cortex-lytic enzyme	NA|59aa|up_8|NZ_AP022557.1_1769879_1770056_+	COG4873, COG4873, Uncharacterized protein conserved in bacteria [Function unknown]	NA|220aa|up_7|NZ_AP022557.1_1770088_1770748_-	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs	NA|299aa|up_6|NZ_AP022557.1_1771304_1772201_-	NA	NA|458aa|up_5|NZ_AP022557.1_1772343_1773717_-	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|245aa|up_4|NZ_AP022557.1_1774231_1774966_-	TIGR03365, Bsubt_queE, 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|146aa|up_3|NZ_AP022557.1_1774965_1775403_-	COG0720, COG0720, 6-pyruvoyl-tetrahydropterin synthase [Coenzyme metabolism]	NA|224aa|up_2|NZ_AP022557.1_1775399_1776071_-	PRK11106, PRK11106, queuosine biosynthesis protein QueC; Provisional	NA|371aa|up_1|NZ_AP022557.1_1776240_1777353_-	pfam03845, Spore_permease, Spore germination protein	NA|363aa|up_0|NZ_AP022557.1_1777379_1778468_-	TIGR02887, Spore_germination_protein_B3, germination protein, Ger(x)C family	NA|554aa|down_0|NZ_AP022557.1_1780495_1782157_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|347aa|down_1|NZ_AP022557.1_1782221_1783262_-	COG3949, COG3949, Uncharacterized membrane protein [Function unknown]	NA|253aa|down_2|NZ_AP022557.1_1783579_1784338_-	pfam13115, YtkA, YtkA-like	NA|712aa|down_3|NZ_AP022557.1_1784607_1786743_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|203aa|down_4|NZ_AP022557.1_1786995_1787604_+	NA	NA|565aa|down_5|NZ_AP022557.1_1787778_1789473_-	cd09606, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF)	NA|475aa|down_6|NZ_AP022557.1_1790280_1791705_+	TIGR00905, Arginine/ornithine_antiporter, transporter, basic amino acid/polyamine antiporter (APA) family	NA|673aa|down_7|NZ_AP022557.1_1791826_1793845_+	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]	NA|190aa|down_8|NZ_AP022557.1_1794175_1794745_-	PRK15070, PRK15070, phosphate propanoyltransferase	NA|154aa|down_9|NZ_AP022557.1_1794920_1795382_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	18	1934333-1934419	18	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	GCAAAATGTCTGCGAGCTCAACG	23	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|69aa|up_2|NZ_AP022557.1_1931853_1932060_-,NA|83aa|down_0|NZ_AP022557.1_1935931_1936180_+,NA|247aa|down_1|NZ_AP022557.1_1936374_1937115_-	NA|354aa|up_9|NZ_AP022557.1_1924037_1925099_-	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|341aa|up_8|NZ_AP022557.1_1925120_1926143_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|310aa|up_7|NZ_AP022557.1_1926139_1927069_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|550aa|up_6|NZ_AP022557.1_1927193_1928843_-	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	NA|126aa|up_5|NZ_AP022557.1_1929283_1929661_+	pfam13038, DUF3899, Domain of unknown function (DUF3899)	NA|329aa|up_4|NZ_AP022557.1_1929996_1930983_+	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|247aa|up_3|NZ_AP022557.1_1931027_1931768_-	pfam12227, DUF3603, Protein of unknown function (DUF3603)	NA|69aa|up_2|NZ_AP022557.1_1931853_1932060_-	NA	NA|263aa|up_1|NZ_AP022557.1_1932153_1932942_-	pfam10026, DUF2268, Predicted Zn-dependent protease (DUF2268)	NA|413aa|up_0|NZ_AP022557.1_1933074_1934313_-	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|83aa|down_0|NZ_AP022557.1_1935931_1936180_+	NA	NA|247aa|down_1|NZ_AP022557.1_1936374_1937115_-	NA	NA|63aa|down_2|NZ_AP022557.1_1937252_1937441_+	pfam11151, DUF2929, Protein of unknown function (DUF2929)	NA|707aa|down_3|NZ_AP022557.1_1937819_1939940_-	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only]	NA|191aa|down_4|NZ_AP022557.1_1940030_1940603_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|862aa|down_5|NZ_AP022557.1_1940735_1943321_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|60aa|down_6|NZ_AP022557.1_1943434_1943614_-	pfam14168, YjzC, YjzC-like protein	NA|313aa|down_7|NZ_AP022557.1_1943805_1944744_-	PRK00779, PRK00779, ornithine carbamoyltransferase; Provisional	NA|1043aa|down_8|NZ_AP022557.1_1944740_1947869_-	PRK12815, carB, carbamoyl phosphate synthase large subunit; Reviewed	NA|355aa|down_9|NZ_AP022557.1_1947861_1948926_-	PRK12838, PRK12838, carbamoyl phosphate synthase small subunit; Reviewed
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	19	2304367-2304459	19	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	CCTGCTATTCAATGTAATTGACAAG	25	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA|96aa|down_3|NZ_AP022557.1_2308134_2308422_-	NA|188aa|up_9|NZ_AP022557.1_2293748_2294312_+	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	NA|156aa|up_8|NZ_AP022557.1_2294517_2294985_-	smart00903, Flavin_Reduct, Flavin reductase like domain	NA|242aa|up_7|NZ_AP022557.1_2295181_2295907_-	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|257aa|up_6|NZ_AP022557.1_2295906_2296677_-	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system	NA|458aa|up_5|NZ_AP022557.1_2297109_2298483_+	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|294aa|up_4|NZ_AP022557.1_2299436_2300318_-	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins	NA|391aa|up_3|NZ_AP022557.1_2300379_2301552_-	cd06333, PBP1_ABC_RPA1789-like, type 1 periplasmic binding-protein component (CouP) of an ABC system (CouPSTU; RPA1789, RPA1791-1793), involved in active transport of lignin-derived aromatic substrates, and its close homologs	NA|216aa|up_2|NZ_AP022557.1_2301706_2302354_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|504aa|up_1|NZ_AP022557.1_2302393_2303905_-	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like	NA|131aa|up_0|NZ_AP022557.1_2303918_2304311_-	pfam02962, CHMI, 5-carboxymethyl-2-hydroxymuconate isomerase	NA|260aa|down_0|NZ_AP022557.1_2305172_2305952_-	TIGR02305, HpaG-N-term, 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit	NA|306aa|down_1|NZ_AP022557.1_2306049_2306967_-	TIGR02313, dihydrodipicolinate_synthase, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase	NA|328aa|down_2|NZ_AP022557.1_2307117_2308101_-	TIGR02295, Substrate_Complex_Of_Homoprotocatechuate, 3,4-dihydroxyphenylacetate 2,3-dioxygenase	NA|96aa|down_3|NZ_AP022557.1_2308134_2308422_-	NA	NA|493aa|down_4|NZ_AP022557.1_2308507_2309986_-	TIGR02309, 4-hydroxyphenylacetate_3-monooxygenase, 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component	NA|308aa|down_5|NZ_AP022557.1_2310208_2311132_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|300aa|down_6|NZ_AP022557.1_2311276_2312176_-	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism]	NA|76aa|down_7|NZ_AP022557.1_2312193_2312421_-	pfam10842, DUF2642, Protein of unknown function (DUF2642)	NA|455aa|down_8|NZ_AP022557.1_2313028_2314393_-	COG3182, PiuB, Uncharacterized iron-regulated membrane protein [Function unknown]	NA|392aa|down_9|NZ_AP022557.1_2314511_2315687_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	20	2521257-2521360	20	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	TGCCCTCCACCCGGGGATGAAAATCCCGCG	30	1	9	2521287-2521330|2521287-2521330|2521287-2521330|2521287-2521330|2521287-2521330|2521287-2521330|2521287-2521330|2521287-2521330|2521287-2521330	NZ_AP022557.1_1818433-1818390|NZ_AP022557.1_3147271-3147228|NZ_AP022557.1_3419522-3419565|NZ_AP022557.1_3686156-3686199|NZ_AP022557.1_742872-742915|NZ_AP022557.1_743018-743061|NZ_AP022557.1_2540271-2540228|NZ_AP022557.1_3685644-3685687|NZ_AP022557.1_3689930-3689973	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|66aa|up_9|NZ_AP022557.1_2504479_2504677_-,NA|424aa|up_4|NZ_AP022557.1_2512873_2514145_+,NA	NA|66aa|up_9|NZ_AP022557.1_2504479_2504677_-	NA	NA|265aa|up_8|NZ_AP022557.1_2505711_2506506_-	COG2856, COG2856, Predicted Zn peptidase [Amino acid transport and metabolism]	NA|378aa|up_7|NZ_AP022557.1_2506741_2507875_+	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|129aa|up_6|NZ_AP022557.1_2509137_2509524_-	PRK09907, PRK09907, endoribonuclease MazF	NA|103aa|up_5|NZ_AP022557.1_2509523_2509832_-	COG2336, MazE, Growth regulator [Signal transduction mechanisms]	NA|424aa|up_4|NZ_AP022557.1_2512873_2514145_+	NA	NA|469aa|up_3|NZ_AP022557.1_2514789_2516196_-	TIGR03023, Sugar_transferase	NA|457aa|up_2|NZ_AP022557.1_2516329_2517700_-	cd02509, GDP-M1P_Guanylyltransferase, GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose	NA|377aa|up_1|NZ_AP022557.1_2517705_2518836_-	cd03808, GT4_CapM-like, capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins	NA|369aa|up_0|NZ_AP022557.1_2518840_2519947_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|308aa|down_0|NZ_AP022557.1_2522469_2523393_-	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|280aa|down_1|NZ_AP022557.1_2523415_2524255_-	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]	NA|338aa|down_2|NZ_AP022557.1_2524251_2525265_-	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]	NA|188aa|down_3|NZ_AP022557.1_2525261_2525825_-	cd00438, cupin_RmlC, RmlC carbohydrate epimerase, involved in dTDP-L-rhamnose production	NA|296aa|down_4|NZ_AP022557.1_2525839_2526727_-	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form	NA|458aa|down_5|NZ_AP022557.1_2526726_2528100_-	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|294aa|down_6|NZ_AP022557.1_2528955_2529837_-	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|320aa|down_7|NZ_AP022557.1_2531740_2532700_-	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane]	NA|531aa|down_8|NZ_AP022557.1_2532709_2534302_-	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|162aa|down_9|NZ_AP022557.1_2534316_2534802_-	sd00006, TPR, Tetratricopeptide repeat
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	21	2551013-2551113	21	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	GGCAGATCACACTGCCCATGGATCTTT	27	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|260aa|up_7|NZ_AP022557.1_2543956_2544736_-,NA|162aa|up_5|NZ_AP022557.1_2546293_2546779_-,NA|187aa|down_2|NZ_AP022557.1_2554047_2554608_+,NA|125aa|down_4|NZ_AP022557.1_2557133_2557508_+,NA|226aa|down_5|NZ_AP022557.1_2557511_2558189_+,NA|47aa|down_9|NZ_AP022557.1_2561459_2561600_-	NA|379aa|up_9|NZ_AP022557.1_2538692_2539829_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|904aa|up_8|NZ_AP022557.1_2540868_2543580_-	pfam18058, SbsC_C, SbsC C-terminal domain	NA|260aa|up_7|NZ_AP022557.1_2543956_2544736_-	NA	NA|448aa|up_6|NZ_AP022557.1_2544770_2546114_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|162aa|up_5|NZ_AP022557.1_2546293_2546779_-	NA	NA|136aa|up_4|NZ_AP022557.1_2546987_2547395_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|120aa|up_3|NZ_AP022557.1_2547781_2548141_-	PRK07275, PRK07275, single-stranded DNA-binding protein; Provisional	NA|151aa|up_2|NZ_AP022557.1_2548392_2548845_+	pfam14183, YwpF, YwpF-like protein	NA|220aa|up_1|NZ_AP022557.1_2549148_2549808_-	cd05828, Sortase_D_1, Sortase domain found in subfamily 1 of the class D family of sortases	NA|305aa|up_0|NZ_AP022557.1_2549814_2550729_-	TIGR04383, hypothetical_protein_HMPREF1015_01194, processed acidic surface protein	NA|459aa|down_0|NZ_AP022557.1_2551326_2552703_-	PRK09034, PRK09034, aspartate kinase; Reviewed	NA|145aa|down_1|NZ_AP022557.1_2553303_2553738_-	pfam06935, DUF1284, Protein of unknown function (DUF1284)	NA|187aa|down_2|NZ_AP022557.1_2554047_2554608_+	NA	NA|507aa|down_3|NZ_AP022557.1_2555364_2556885_+	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like	NA|125aa|down_4|NZ_AP022557.1_2557133_2557508_+	NA	NA|226aa|down_5|NZ_AP022557.1_2557511_2558189_+	NA	NA|120aa|down_6|NZ_AP022557.1_2558398_2558758_+	pfam05610, DUF779, Protein of unknown function (DUF779)	NA|536aa|down_7|NZ_AP022557.1_2558951_2560559_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|308aa|down_8|NZ_AP022557.1_2560543_2561467_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|47aa|down_9|NZ_AP022557.1_2561459_2561600_-	NA
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	22	2581396-2581490	22	CRISPRCasFinder	no	csa3	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Type I-A	CTTCCAGCCGAACGTGGTCGAACGTCAAG	29	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA	NA|338aa|up_9|NZ_AP022557.1_2569301_2570315_+	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional	NA|219aa|up_8|NZ_AP022557.1_2570304_2570961_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|277aa|up_7|NZ_AP022557.1_2571077_2571908_+	cd13599, PBP2_lipoprotein_Gna1946, The membrane-associated lipoprotein Gna1946 from Neisseria meningitidis; the type 2 periplasmic binding protein fold	NA|464aa|up_6|NZ_AP022557.1_2571969_2573361_+	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family	NA|262aa|up_5|NZ_AP022557.1_2573482_2574268_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|274aa|up_4|NZ_AP022557.1_2574893_2575715_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|324aa|up_3|NZ_AP022557.1_2575714_2576686_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|432aa|up_2|NZ_AP022557.1_2576747_2578043_-	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|514aa|up_1|NZ_AP022557.1_2578354_2579896_-	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators	NA|490aa|up_0|NZ_AP022557.1_2579873_2581343_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|338aa|down_0|NZ_AP022557.1_2581574_2582588_-	cd06314, PBP1_tmGBP, periplasmic sugar-binding domain of Thermotoga maritima glucose-binding protein (tmGBP) and its close homologs	NA|297aa|down_1|NZ_AP022557.1_2582730_2583621_-	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase)	NA|448aa|down_2|NZ_AP022557.1_2583834_2585178_-	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase	NA|256aa|down_3|NZ_AP022557.1_2585302_2586070_+	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|458aa|down_4|NZ_AP022557.1_2589251_2590625_-	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|456aa|down_5|NZ_AP022557.1_2590825_2592193_-	PLN02805, PLN02805, D-lactate dehydrogenase [cytochrome]	NA|326aa|down_6|NZ_AP022557.1_2592271_2593249_-	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|360aa|down_7|NZ_AP022557.1_2593249_2594329_-	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit	NA|431aa|down_8|NZ_AP022557.1_2594404_2595697_-	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|67aa|down_9|NZ_AP022557.1_2596236_2596437_-	pfam12725, DUF3810, Protein of unknown function (DUF3810)
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	23	3241815-3243110	1,23,1	PILER-CR,CRISPRCasFinder,CRT	no	csm6,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas8b1,cas7,cas5,cas3,cas4	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Type III-B,Type III-C,Type III-D,Type I-B,Type III-A, Type III-C?	GTTTTTATCGTACCTATGAGGGATTGAAAC,GTTTTTATCGTACCTATGAGGGATTGAAAC,GTTTTTATCGTACCTATGAGGGATTGAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	18,19,19	19	TypeIII-B,TypeIII-C,TypeIII-D,TypeI-B,TypeIII-A,TypeIII-C?	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA	NA|122aa|up_9|NZ_AP022557.1_3225700_3226066_+	pfam17329, DUF5367, Family of unknown function (DUF5367)	NA|226aa|up_8|NZ_AP022557.1_3227136_3227814_+	pfam04892, VanZ, VanZ like family	NA|397aa|up_7|NZ_AP022557.1_3227852_3229043_+	cd14728, Ere-like, Erythromycin esterase and succinoglycan biosynthesis related proteins	NA|210aa|up_6|NZ_AP022557.1_3229043_3229673_-	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|376aa|up_5|NZ_AP022557.1_3230289_3231417_-	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|188aa|up_4|NZ_AP022557.1_3232776_3233340_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|504aa|up_3|NZ_AP022557.1_3233487_3234999_+	TIGR02677, conserved_hypothetical_protein, TIGR02677 family protein	NA|386aa|up_2|NZ_AP022557.1_3234982_3236140_+	TIGR02678, hypothetical_protein, TIGR02678 family protein	NA|1373aa|up_1|NZ_AP022557.1_3236139_3240258_+	TIGR02680, conserved_hypothetical_protein, TIGR02680 family protein	NA|407aa|up_0|NZ_AP022557.1_3240254_3241475_+	TIGR02679, conserved_hypothetical_protein, TIGR02679 family protein	csm6|401aa|down_0|NZ_AP022557.1_3243933_3245136_+	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csx1|442aa|down_1|NZ_AP022557.1_3245138_3246464_+	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	cmr1gr7|303aa|down_2|NZ_AP022557.1_3246474_3247383_+	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cas10|548aa|down_3|NZ_AP022557.1_3247379_3249023_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr3gr5|377aa|down_4|NZ_AP022557.1_3249019_3250150_+	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cmr4gr7|298aa|down_5|NZ_AP022557.1_3250149_3251043_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|137aa|down_6|NZ_AP022557.1_3251058_3251469_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr6gr7|382aa|down_7|NZ_AP022557.1_3251481_3252627_+	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cas8b1|572aa|down_8|NZ_AP022557.1_3256651_3258367_+	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802)	cas7|319aa|down_9|NZ_AP022557.1_3258368_3259325_+	cd09690, Cas7_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas7
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	24	3252814-3255158	2,24,2	PILER-CR,CRISPRCasFinder,CRT	no	csm6,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas8b1,cas7,cas5,cas3,cas4,cas1,cas2,cas6	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Type III-B,Type III-C,Type III-D,Type I-B,Type III-A	GTTTTTATCGTACCTATGAGGGATTGAAAC,GTTTTTATCGTACCTATGAGGGATTGAAAC,GTTTTTATCGTACCTATGAGGGATTGAAAC	30,30,30	1	1	3255092-3255128	NZ_AP022559.1_34130-34166	NA:NA:NA	34,35,35	35	TypeIII-B,TypeIII-C,TypeIII-D,TypeI-B,TypeIII-A	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA	NA|1373aa|up_9|NZ_AP022557.1_3236139_3240258_+	TIGR02680, conserved_hypothetical_protein, TIGR02680 family protein	NA|407aa|up_8|NZ_AP022557.1_3240254_3241475_+	TIGR02679, conserved_hypothetical_protein, TIGR02679 family protein	csm6|401aa|up_7|NZ_AP022557.1_3243933_3245136_+	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csx1|442aa|up_6|NZ_AP022557.1_3245138_3246464_+	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	cmr1gr7|303aa|up_5|NZ_AP022557.1_3246474_3247383_+	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cas10|548aa|up_4|NZ_AP022557.1_3247379_3249023_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr3gr5|377aa|up_3|NZ_AP022557.1_3249019_3250150_+	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cmr4gr7|298aa|up_2|NZ_AP022557.1_3250149_3251043_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|137aa|up_1|NZ_AP022557.1_3251058_3251469_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr6gr7|382aa|up_0|NZ_AP022557.1_3251481_3252627_+	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cas8b1|572aa|down_0|NZ_AP022557.1_3256651_3258367_+	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802)	cas7|319aa|down_1|NZ_AP022557.1_3258368_3259325_+	cd09690, Cas7_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|248aa|down_2|NZ_AP022557.1_3259340_3260084_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas3|778aa|down_3|NZ_AP022557.1_3260085_3262419_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas4|170aa|down_4|NZ_AP022557.1_3262428_3262938_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|334aa|down_5|NZ_AP022557.1_3262940_3263942_+	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas2|88aa|down_6|NZ_AP022557.1_3263953_3264217_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas6|249aa|down_7|NZ_AP022557.1_3264387_3265134_+	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|303aa|down_8|NZ_AP022557.1_3267278_3268187_+	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase)	NA|379aa|down_9|NZ_AP022557.1_3269041_3270178_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	25	3265313-3267210	3,25,3	PILER-CR,CRISPRCasFinder,CRT	no	cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas8b1,cas7,cas5,cas3,cas4,cas1,cas2,cas6,cas9	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Type II-A,Type III-B,Type III-C,Type III-D,Type II-C,Type I-B,Type III-A,Type II-B	GTTTTTATCGTACCTATGAGGGATTGAAAC,GTTTTTATCGTACCTATGAGGGATTGAAAC,GTTTTTATCGTACCTATGAGGGATTGAAAC	30,30,30	1	1	3267144-3267180	NZ_AP022559.1_34130-34166	NA:NA:NA	27,28,28	28	TypeII-A,TypeIII-B,TypeIII-C,TypeIII-D,TypeII-C,TypeI-B,TypeIII-A,TypeII-B	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA|56aa|down_2|NZ_AP022557.1_3270725_3270893_+	cmr5gr11|137aa|up_9|NZ_AP022557.1_3251058_3251469_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr6gr7|382aa|up_8|NZ_AP022557.1_3251481_3252627_+	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cas8b1|572aa|up_7|NZ_AP022557.1_3256651_3258367_+	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802)	cas7|319aa|up_6|NZ_AP022557.1_3258368_3259325_+	cd09690, Cas7_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|248aa|up_5|NZ_AP022557.1_3259340_3260084_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas3|778aa|up_4|NZ_AP022557.1_3260085_3262419_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas4|170aa|up_3|NZ_AP022557.1_3262428_3262938_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|334aa|up_2|NZ_AP022557.1_3262940_3263942_+	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas2|88aa|up_1|NZ_AP022557.1_3263953_3264217_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas6|249aa|up_0|NZ_AP022557.1_3264387_3265134_+	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|303aa|down_0|NZ_AP022557.1_3267278_3268187_+	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase)	NA|379aa|down_1|NZ_AP022557.1_3269041_3270178_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|56aa|down_2|NZ_AP022557.1_3270725_3270893_+	NA	NA|379aa|down_3|NZ_AP022557.1_3271103_3272240_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	cas2|88aa|down_4|NZ_AP022557.1_3272616_3272880_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|293aa|down_5|NZ_AP022557.1_3272884_3273763_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1088aa|down_6|NZ_AP022557.1_3273713_3276977_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|352aa|down_7|NZ_AP022557.1_3277285_3278341_+	cd02253, DmpA, L-Aminopeptidase D-amidase/D-esterase (DmpA) family; DmpA catalyzes the release of N-terminal D and L amino acids from peptide susbtrates	NA|413aa|down_8|NZ_AP022557.1_3278502_3279741_-	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|218aa|down_9|NZ_AP022557.1_3279901_3280555_-	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	26	3268344-3268709	4,4	PILER-CR,CRT	no	cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas8b1,cas7,cas5,cas3,cas4,cas1,cas2,cas6,cas9	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Type III-B,Type II-C, Type I-B?,Type II-A,Type II-B,Type I-B	GTCATAGTTCCCCTGAGATTATCGCTGTGGTATAAT,GTCATAGTTCCCCTGAGATTATCGCTGTGGTATAAT	36,36	0	0	NA	NA	NA:NA	5,5	5	TypeIII-B,TypeII-C,TypeI-B?,TypeII-A,TypeII-B,TypeI-B	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA|56aa|down_1|NZ_AP022557.1_3270725_3270893_+,NA|174aa|down_9|NZ_AP022557.1_3280514_3281036_-	cmr6gr7|382aa|up_9|NZ_AP022557.1_3251481_3252627_+	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cas8b1|572aa|up_8|NZ_AP022557.1_3256651_3258367_+	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802)	cas7|319aa|up_7|NZ_AP022557.1_3258368_3259325_+	cd09690, Cas7_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|248aa|up_6|NZ_AP022557.1_3259340_3260084_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas3|778aa|up_5|NZ_AP022557.1_3260085_3262419_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas4|170aa|up_4|NZ_AP022557.1_3262428_3262938_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|334aa|up_3|NZ_AP022557.1_3262940_3263942_+	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas2|88aa|up_2|NZ_AP022557.1_3263953_3264217_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas6|249aa|up_1|NZ_AP022557.1_3264387_3265134_+	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|303aa|up_0|NZ_AP022557.1_3267278_3268187_+	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase)	NA|379aa|down_0|NZ_AP022557.1_3269041_3270178_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|56aa|down_1|NZ_AP022557.1_3270725_3270893_+	NA	NA|379aa|down_2|NZ_AP022557.1_3271103_3272240_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	cas2|88aa|down_3|NZ_AP022557.1_3272616_3272880_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|293aa|down_4|NZ_AP022557.1_3272884_3273763_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1088aa|down_5|NZ_AP022557.1_3273713_3276977_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|352aa|down_6|NZ_AP022557.1_3277285_3278341_+	cd02253, DmpA, L-Aminopeptidase D-amidase/D-esterase (DmpA) family; DmpA catalyzes the release of N-terminal D and L amino acids from peptide susbtrates	NA|413aa|down_7|NZ_AP022557.1_3278502_3279741_-	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|218aa|down_8|NZ_AP022557.1_3279901_3280555_-	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|174aa|down_9|NZ_AP022557.1_3280514_3281036_-	NA
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	27	3352129-3353018	5,26,5	PILER-CR,CRISPRCasFinder,CRT	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	GTTTTTATCGTACCTATGAGGGATTGAAAC,GTTTTTATCGTACCTATGAGGGATTGAAAC,GTTTTTATCGTACCTATGAGGGATTGAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	12,13,13	13	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|106aa|up_7|NZ_AP022557.1_3338015_3338333_+,NA|128aa|up_3|NZ_AP022557.1_3342426_3342810_+,NA	NA|150aa|up_9|NZ_AP022557.1_3337041_3337491_+	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|160aa|up_8|NZ_AP022557.1_3337492_3337972_+	COG5660, COG5660, Predicted integral membrane protein [Function unknown]	NA|106aa|up_7|NZ_AP022557.1_3338015_3338333_+	NA	NA|177aa|up_6|NZ_AP022557.1_3339011_3339542_-	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]	NA|209aa|up_5|NZ_AP022557.1_3339815_3340442_-	pfam14104, DUF4277, Domain of unknown function (DUF4277)	NA|458aa|up_4|NZ_AP022557.1_3340913_3342287_-	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|128aa|up_3|NZ_AP022557.1_3342426_3342810_+	NA	NA|216aa|up_2|NZ_AP022557.1_3342881_3343529_+	pfam04892, VanZ, VanZ like family	NA|494aa|up_1|NZ_AP022557.1_3346726_3348208_+	pfam05598, DUF772, Transposase domain (DUF772)	NA|430aa|up_0|NZ_AP022557.1_3348264_3349554_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|458aa|down_0|NZ_AP022557.1_3353219_3354593_-	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|462aa|down_1|NZ_AP022557.1_3356592_3357978_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|492aa|down_2|NZ_AP022557.1_3358650_3360126_+	pfam01235, Na_Ala_symp, Sodium:alanine symporter family	NA|292aa|down_3|NZ_AP022557.1_3360591_3361467_-	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|139aa|down_4|NZ_AP022557.1_3361545_3361962_-	COG1959, COG1959, Predicted transcriptional regulator [Transcription]	NA|461aa|down_5|NZ_AP022557.1_3362406_3363789_+	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|254aa|down_6|NZ_AP022557.1_3363969_3364731_-	pfam07070, Spo0M, SpoOM protein	NA|389aa|down_7|NZ_AP022557.1_3365112_3366279_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|348aa|down_8|NZ_AP022557.1_3366569_3367613_+	COG1208, GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]	NA|396aa|down_9|NZ_AP022557.1_3367609_3368797_+	cd03822, GT4_mannosyltransferase-like, mannosyltransferases of glycosyltransferase family 4 and similar proteins
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	28	3354673-3356148	27,6,6	CRISPRCasFinder,CRT,PILER-CR	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	GTTTTTATCGTACCTATGAGGGATTGAAAC,GTTTTTATCGTACCTATGAGGGATTGAAAC,GTTTTTATCGTACCTATGAGGGATTGAAAC	30,30,30	0	0	NA	NA	NA:NA:NA	22,22,20	22	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|106aa|up_8|NZ_AP022557.1_3338015_3338333_+,NA|128aa|up_4|NZ_AP022557.1_3342426_3342810_+,NA|372aa|down_9|NZ_AP022557.1_3368777_3369893_+	NA|160aa|up_9|NZ_AP022557.1_3337492_3337972_+	COG5660, COG5660, Predicted integral membrane protein [Function unknown]	NA|106aa|up_8|NZ_AP022557.1_3338015_3338333_+	NA	NA|177aa|up_7|NZ_AP022557.1_3339011_3339542_-	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]	NA|209aa|up_6|NZ_AP022557.1_3339815_3340442_-	pfam14104, DUF4277, Domain of unknown function (DUF4277)	NA|458aa|up_5|NZ_AP022557.1_3340913_3342287_-	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|128aa|up_4|NZ_AP022557.1_3342426_3342810_+	NA	NA|216aa|up_3|NZ_AP022557.1_3342881_3343529_+	pfam04892, VanZ, VanZ like family	NA|494aa|up_2|NZ_AP022557.1_3346726_3348208_+	pfam05598, DUF772, Transposase domain (DUF772)	NA|430aa|up_1|NZ_AP022557.1_3348264_3349554_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|458aa|up_0|NZ_AP022557.1_3353219_3354593_-	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|462aa|down_0|NZ_AP022557.1_3356592_3357978_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|492aa|down_1|NZ_AP022557.1_3358650_3360126_+	pfam01235, Na_Ala_symp, Sodium:alanine symporter family	NA|292aa|down_2|NZ_AP022557.1_3360591_3361467_-	cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs	NA|139aa|down_3|NZ_AP022557.1_3361545_3361962_-	COG1959, COG1959, Predicted transcriptional regulator [Transcription]	NA|461aa|down_4|NZ_AP022557.1_3362406_3363789_+	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|254aa|down_5|NZ_AP022557.1_3363969_3364731_-	pfam07070, Spo0M, SpoOM protein	NA|389aa|down_6|NZ_AP022557.1_3365112_3366279_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|348aa|down_7|NZ_AP022557.1_3366569_3367613_+	COG1208, GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]	NA|396aa|down_8|NZ_AP022557.1_3367609_3368797_+	cd03822, GT4_mannosyltransferase-like, mannosyltransferases of glycosyltransferase family 4 and similar proteins	NA|372aa|down_9|NZ_AP022557.1_3368777_3369893_+	NA
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	29	3399976-3400069	28	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	GTTTAAAAAAAACAAAGACAACATGCAAC	29	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA,NA|182aa|down_3|NZ_AP022557.1_3404456_3405002_+,NA|71aa|down_4|NZ_AP022557.1_3407345_3407558_+	NA|385aa|up_9|NZ_AP022557.1_3387706_3388861_+	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|386aa|up_8|NZ_AP022557.1_3388954_3390112_-	cd17474, MFS_YfmO_like, Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily	NA|142aa|up_7|NZ_AP022557.1_3390111_3390537_-	cd01108, HTH_CueR, Helix-Turn-Helix DNA binding domain of CueR-like transcription regulators	NA|161aa|up_6|NZ_AP022557.1_3391409_3391892_-	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]	NA|279aa|up_5|NZ_AP022557.1_3392179_3393016_-	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion]	NA|776aa|up_4|NZ_AP022557.1_3393002_3395330_-	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|218aa|up_3|NZ_AP022557.1_3395301_3395955_-	TIGR03202, pucB, xanthine dehydrogenase accessory protein pucB	NA|343aa|up_2|NZ_AP022557.1_3395951_3396980_-	COG1975, XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family [Posttranslational modification, protein turnover, chaperones]	NA|59aa|up_1|NZ_AP022557.1_3397170_3397347_-	COG4877, COG4877, Uncharacterized protein conserved in bacteria [Function unknown]	NA|150aa|up_0|NZ_AP022557.1_3397887_3398337_+	PRK03065, hutP, anti-terminator HutP; Provisional	NA|421aa|down_0|NZ_AP022557.1_3400142_3401405_+	COG3858, COG3858, Predicted glycosyl hydrolase [General function prediction only]	NA|229aa|down_1|NZ_AP022557.1_3401683_3402370_+	TIGR03717, R_switched_YjbE, integral membrane protein, YjbE family	NA|311aa|down_2|NZ_AP022557.1_3402393_3403326_+	cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase	NA|182aa|down_3|NZ_AP022557.1_3404456_3405002_+	NA	NA|71aa|down_4|NZ_AP022557.1_3407345_3407558_+	NA	NA|241aa|down_5|NZ_AP022557.1_3408365_3409088_-	COG1556, COG1556, Uncharacterized conserved protein [Function unknown]	NA|477aa|down_6|NZ_AP022557.1_3409084_3410515_-	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion]	NA|266aa|down_7|NZ_AP022557.1_3410453_3411251_-	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|200aa|down_8|NZ_AP022557.1_3412138_3412738_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|696aa|down_9|NZ_AP022557.1_3412709_3414797_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	30	3417350-3417449	29	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	TTTGCCCTCCACCCGGGGATGAAAATCC	28	1	8	3417378-3417421|3417378-3417421|3417378-3417421|3417378-3417421|3417378-3417421|3417378-3417421|3417378-3417421|3417378-3417421	NZ_AP022557.1_3685424-3685467|NZ_AP022557.1_2538424-2538381|NZ_AP022557.1_3147568-3147525|NZ_AP022557.1_3149341-3149298|NZ_AP022557.1_3149486-3149443|NZ_AP022557.1_3270766-3270723|NZ_AP022557.1_743014-743057|NZ_AP022557.1_2540275-2540232	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|182aa|up_9|NZ_AP022557.1_3404456_3405002_+,NA|71aa|up_8|NZ_AP022557.1_3407345_3407558_+,NA|119aa|up_2|NZ_AP022557.1_3414804_3415161_-,NA|55aa|up_1|NZ_AP022557.1_3415167_3415332_-,NA|58aa|down_4|NZ_AP022557.1_3424090_3424264_+,NA|62aa|down_5|NZ_AP022557.1_3424291_3424477_+,NA|109aa|down_6|NZ_AP022557.1_3424493_3424820_+	NA|182aa|up_9|NZ_AP022557.1_3404456_3405002_+	NA	NA|71aa|up_8|NZ_AP022557.1_3407345_3407558_+	NA	NA|241aa|up_7|NZ_AP022557.1_3408365_3409088_-	COG1556, COG1556, Uncharacterized conserved protein [Function unknown]	NA|477aa|up_6|NZ_AP022557.1_3409084_3410515_-	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion]	NA|266aa|up_5|NZ_AP022557.1_3410453_3411251_-	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|200aa|up_4|NZ_AP022557.1_3412138_3412738_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|696aa|up_3|NZ_AP022557.1_3412709_3414797_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|119aa|up_2|NZ_AP022557.1_3414804_3415161_-	NA	NA|55aa|up_1|NZ_AP022557.1_3415167_3415332_-	NA	NA|434aa|up_0|NZ_AP022557.1_3415536_3416838_+	TIGR03604, hypothetical_protein, thiazole/oxazole-forming peptide maturase, SagD family component	NA|379aa|down_0|NZ_AP022557.1_3417676_3418813_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|379aa|down_1|NZ_AP022557.1_3420038_3421175_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|568aa|down_2|NZ_AP022557.1_3421629_3423333_+	TIGR03605, antibiot_sagB, SagB-type dehydrogenase domain	NA|224aa|down_3|NZ_AP022557.1_3423325_3423997_+	pfam00881, Nitroreductase, Nitroreductase family	NA|58aa|down_4|NZ_AP022557.1_3424090_3424264_+	NA	NA|62aa|down_5|NZ_AP022557.1_3424291_3424477_+	NA	NA|109aa|down_6|NZ_AP022557.1_3424493_3424820_+	NA	NA|372aa|down_7|NZ_AP022557.1_3424947_3426063_+	cd06159, S2P-M50_PDZ_Arch, Uncharacterized Archaeal homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|833aa|down_8|NZ_AP022557.1_3426077_3428576_+	pfam04738, Lant_dehydr_N, Lantibiotic dehydratase, C-terminus	NA|298aa|down_9|NZ_AP022557.1_3428608_3429502_+	pfam14028, Lant_dehydr_C, Lantibiotic biosynthesis dehydratase C-term
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	31	3421344-3421441	30	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	TGCCCTCCACCCGGGGATGAAAATCC	26	1	10	3421370-3421415|3421370-3421415|3421370-3421415|3421370-3421415|3421370-3421415|3421370-3421415|3421370-3421415|3421370-3421415|3421370-3421415|3421370-3421415	NZ_AP022557.1_742942-742987|NZ_AP022557.1_2540347-2540302|NZ_AP022557.1_2540563-2540518|NZ_AP022557.1_3145423-3145378|NZ_AP022557.1_3419082-3419127|NZ_AP022557.1_2540128-2540083|NZ_AP022557.1_3151259-3151214|NZ_AP022557.1_3272610-3272565|NZ_AP022557.1_3419302-3419347|NZ_AP022557.1_3688077-3688122	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|119aa|up_5|NZ_AP022557.1_3414804_3415161_-,NA|55aa|up_4|NZ_AP022557.1_3415167_3415332_-,NA|58aa|down_2|NZ_AP022557.1_3424090_3424264_+,NA|62aa|down_3|NZ_AP022557.1_3424291_3424477_+,NA|109aa|down_4|NZ_AP022557.1_3424493_3424820_+	NA|477aa|up_9|NZ_AP022557.1_3409084_3410515_-	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion]	NA|266aa|up_8|NZ_AP022557.1_3410453_3411251_-	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|200aa|up_7|NZ_AP022557.1_3412138_3412738_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|696aa|up_6|NZ_AP022557.1_3412709_3414797_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|119aa|up_5|NZ_AP022557.1_3414804_3415161_-	NA	NA|55aa|up_4|NZ_AP022557.1_3415167_3415332_-	NA	NA|434aa|up_3|NZ_AP022557.1_3415536_3416838_+	TIGR03604, hypothetical_protein, thiazole/oxazole-forming peptide maturase, SagD family component	NA|246aa|up_2|NZ_AP022557.1_3416859_3417597_+	TIGR03603, cyclo_dehy_ocin, thiazole/oxazole-forming peptide maturase, SagC family component	NA|379aa|up_1|NZ_AP022557.1_3417676_3418813_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|379aa|up_0|NZ_AP022557.1_3420038_3421175_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|568aa|down_0|NZ_AP022557.1_3421629_3423333_+	TIGR03605, antibiot_sagB, SagB-type dehydrogenase domain	NA|224aa|down_1|NZ_AP022557.1_3423325_3423997_+	pfam00881, Nitroreductase, Nitroreductase family	NA|58aa|down_2|NZ_AP022557.1_3424090_3424264_+	NA	NA|62aa|down_3|NZ_AP022557.1_3424291_3424477_+	NA	NA|109aa|down_4|NZ_AP022557.1_3424493_3424820_+	NA	NA|372aa|down_5|NZ_AP022557.1_3424947_3426063_+	cd06159, S2P-M50_PDZ_Arch, Uncharacterized Archaeal homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|833aa|down_6|NZ_AP022557.1_3426077_3428576_+	pfam04738, Lant_dehydr_N, Lantibiotic dehydratase, C-terminus	NA|298aa|down_7|NZ_AP022557.1_3428608_3429502_+	pfam14028, Lant_dehydr_C, Lantibiotic biosynthesis dehydratase C-term	NA|245aa|down_8|NZ_AP022557.1_3429515_3430250_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|261aa|down_9|NZ_AP022557.1_3430251_3431034_+	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	32	3424554-3424647	31	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	CAGTTCGGCATTTTCACGGAAAA	23	1	24	3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624|3424577-3424624	NZ_AP022557.1_638286-638239|NZ_AP022557.1_2540464-2540417|NZ_AP022557.1_2540535-2540488|NZ_AP022557.1_3145395-3145348|NZ_AP022557.1_3270519-3270472|NZ_AP022557.1_3421398-3421445|NZ_AP022557.1_3511340-3511387|NZ_AP022557.1_3685523-3685570|NZ_AP022557.1_3687450-3687497|NZ_AP022557.1_3687521-3687568|NZ_AP022557.1_3687592-3687639|NZ_AP022557.1_2538396-2538349|NZ_AP022557.1_3147540-3147493|NZ_AP022557.1_3149313-3149266|NZ_AP022557.1_3149458-3149411|NZ_AP022557.1_3151231-3151184|NZ_AP022557.1_3270738-3270691|NZ_AP022557.1_3741575-3741528|NZ_AP022557.1_3419330-3419377|NZ_AP022557.1_3419401-3419448|NZ_AP022557.1_3685452-3685499|NZ_AP022557.1_3685816-3685863|NZ_AP022557.1_3685887-3685934|NZ_AP022557.1_3688105-3688152	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|119aa|up_9|NZ_AP022557.1_3414804_3415161_-,NA|55aa|up_8|NZ_AP022557.1_3415167_3415332_-,NA|58aa|up_1|NZ_AP022557.1_3424090_3424264_+,NA|62aa|up_0|NZ_AP022557.1_3424291_3424477_+,NA|56aa|down_6|NZ_AP022557.1_3432174_3432342_+,NA|172aa|down_8|NZ_AP022557.1_3435587_3436103_-	NA|119aa|up_9|NZ_AP022557.1_3414804_3415161_-	NA	NA|55aa|up_8|NZ_AP022557.1_3415167_3415332_-	NA	NA|434aa|up_7|NZ_AP022557.1_3415536_3416838_+	TIGR03604, hypothetical_protein, thiazole/oxazole-forming peptide maturase, SagD family component	NA|246aa|up_6|NZ_AP022557.1_3416859_3417597_+	TIGR03603, cyclo_dehy_ocin, thiazole/oxazole-forming peptide maturase, SagC family component	NA|379aa|up_5|NZ_AP022557.1_3417676_3418813_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|379aa|up_4|NZ_AP022557.1_3420038_3421175_+	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|568aa|up_3|NZ_AP022557.1_3421629_3423333_+	TIGR03605, antibiot_sagB, SagB-type dehydrogenase domain	NA|224aa|up_2|NZ_AP022557.1_3423325_3423997_+	pfam00881, Nitroreductase, Nitroreductase family	NA|58aa|up_1|NZ_AP022557.1_3424090_3424264_+	NA	NA|62aa|up_0|NZ_AP022557.1_3424291_3424477_+	NA	NA|372aa|down_0|NZ_AP022557.1_3424947_3426063_+	cd06159, S2P-M50_PDZ_Arch, Uncharacterized Archaeal homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|833aa|down_1|NZ_AP022557.1_3426077_3428576_+	pfam04738, Lant_dehydr_N, Lantibiotic dehydratase, C-terminus	NA|298aa|down_2|NZ_AP022557.1_3428608_3429502_+	pfam14028, Lant_dehydr_C, Lantibiotic biosynthesis dehydratase C-term	NA|245aa|down_3|NZ_AP022557.1_3429515_3430250_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|261aa|down_4|NZ_AP022557.1_3430251_3431034_+	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein	NA|299aa|down_5|NZ_AP022557.1_3431048_3431945_+	pfam02517, Abi, CAAX protease self-immunity	NA|56aa|down_6|NZ_AP022557.1_3432174_3432342_+	NA	NA|378aa|down_7|NZ_AP022557.1_3432433_3433567_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|172aa|down_8|NZ_AP022557.1_3435587_3436103_-	NA	NA|333aa|down_9|NZ_AP022557.1_3436305_3437304_+	pfam01446, Rep_1, Replication protein
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	33	3449431-3449529	32	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	TCCATGGGCGGCGGTCTGTCCTCCACCC	28	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|275aa|up_8|NZ_AP022557.1_3440673_3441498_-,NA|122aa|up_7|NZ_AP022557.1_3441508_3441874_-,NA|55aa|up_6|NZ_AP022557.1_3444123_3444288_-,NA|198aa|up_5|NZ_AP022557.1_3444872_3445466_+,NA|78aa|up_2|NZ_AP022557.1_3447577_3447811_+,NA|117aa|up_1|NZ_AP022557.1_3447874_3448225_+,NA	NA|147aa|up_9|NZ_AP022557.1_3439844_3440285_-	PRK00024, PRK00024, DNA repair protein RadC	NA|275aa|up_8|NZ_AP022557.1_3440673_3441498_-	NA	NA|122aa|up_7|NZ_AP022557.1_3441508_3441874_-	NA	NA|55aa|up_6|NZ_AP022557.1_3444123_3444288_-	NA	NA|198aa|up_5|NZ_AP022557.1_3444872_3445466_+	NA	NA|228aa|up_4|NZ_AP022557.1_3445580_3446264_+	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein	NA|308aa|up_3|NZ_AP022557.1_3446263_3447187_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|78aa|up_2|NZ_AP022557.1_3447577_3447811_+	NA	NA|117aa|up_1|NZ_AP022557.1_3447874_3448225_+	NA	NA|328aa|up_0|NZ_AP022557.1_3448278_3449262_+	cd08241, QOR1, Quinone oxidoreductase (QOR)	NA|242aa|down_0|NZ_AP022557.1_3449577_3450303_-	COG2186, FadR, Transcriptional regulators [Transcription]	NA|558aa|down_1|NZ_AP022557.1_3450768_3452442_+	PRK10420, PRK10420, L-lactate permease; Provisional	NA|336aa|down_2|NZ_AP022557.1_3452692_3453700_-	PRK13930, PRK13930, rod shape-determining protein MreB; Provisional	NA|151aa|down_3|NZ_AP022557.1_3454278_3454731_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|818aa|down_4|NZ_AP022557.1_3455078_3457532_+	cd01948, EAL, EAL domain	NA|124aa|down_5|NZ_AP022557.1_3457533_3457905_+	PRK10203, PRK10203, hypothetical protein; Provisional	NA|222aa|down_6|NZ_AP022557.1_3458344_3459010_+	COG1648, CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]	NA|218aa|down_7|NZ_AP022557.1_3459891_3460545_-	TIGR04000, thiol_BshB2, bacillithiol biosynthesis deacetylase BshB2	NA|116aa|down_8|NZ_AP022557.1_3460557_3460905_-	pfam08830, DUF1806, Protein of unknown function (DUF1806)	NA|257aa|down_9|NZ_AP022557.1_3461065_3461836_+	cd11593, Agmatinase-like_2, Agmatinase and related proteins
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	34	3471239-3471333	33	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	TTTTCCGTGAAAATGCCGAACTG	23	1	2	3471262-3471310|3471262-3471310	NZ_AP022557.1_966270-966318|NZ_AP022557.1_3391137-3391185	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|49aa|up_1|NZ_AP022557.1_3469760_3469907_-,NA	NA|249aa|up_9|NZ_AP022557.1_3462921_3463668_-	COG2138, COG2138, Sirohydrochlorin ferrochelatase [Inorganic ion transport and metabolism]	NA|259aa|up_8|NZ_AP022557.1_3463679_3464456_-	PRK06136, PRK06136, uroporphyrinogen-III C-methyltransferase	NA|204aa|up_7|NZ_AP022557.1_3464605_3465217_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|387aa|up_6|NZ_AP022557.1_3465229_3466390_-	PRK04149, sat, sulfate adenylyltransferase; Reviewed	NA|236aa|up_5|NZ_AP022557.1_3466503_3467211_-	TIGR00434, Phosphoadenosine_phosphosulfate_reductase, phosophoadenylyl-sulfate reductase (thioredoxin)	NA|75aa|up_4|NZ_AP022557.1_3467655_3467880_-	pfam06569, DUF1128, Protein of unknown function (DUF1128)	NA|161aa|up_3|NZ_AP022557.1_3468097_3468580_+	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|278aa|up_2|NZ_AP022557.1_3468684_3469518_+	pfam03631, Virul_fac_BrkB, Virulence factor BrkB	NA|49aa|up_1|NZ_AP022557.1_3469760_3469907_-	NA	NA|378aa|up_0|NZ_AP022557.1_3470030_3471164_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|351aa|down_0|NZ_AP022557.1_3471607_3472660_+	TIGR00378, cax, calcium/proton exchanger (cax)	NA|263aa|down_1|NZ_AP022557.1_3472881_3473670_+	pfam14167, YfkD, YfkD-like protein	NA|376aa|down_2|NZ_AP022557.1_3473757_3474885_-	TIGR04478, radical_SAM_superfamily_domain_protein, radical SAM/CxCxxxxC motif protein YfkAB	NA|516aa|down_3|NZ_AP022557.1_3475110_3476658_+	pfam05681, Fumerase, Fumarate hydratase (Fumerase)	NA|264aa|down_4|NZ_AP022557.1_3476827_3477619_+	TIGR02884, spore_pdaA, delta-lactam-biosynthetic de-N-acetylase	NA|289aa|down_5|NZ_AP022557.1_3477862_3478729_+	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair]	NA|469aa|down_6|NZ_AP022557.1_3478725_3480132_+	TIGR00479, 23S_rRNA_uracil1939-C5-methyltransferase_RlmD, 23S rRNA (uracil-5-)-methyltransferase RumA	NA|486aa|down_7|NZ_AP022557.1_3480348_3481806_+	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	NA|382aa|down_8|NZ_AP022557.1_3481814_3482960_+	cd17249, RMtype1_S_EcoR124I-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S	NA|1114aa|down_9|NZ_AP022557.1_3483003_3486345_+	COG4096, HsdR, Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]
GCF_011405175.1_ASM1140517v1	NZ_AP022557	Geobacillus subterraneus strain E55-1	35	3606944-3607045	34	CRISPRCasFinder	no		c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	Orphan	TGCCCATGGATCTTTTCTGTGAAAATCCC	29	0	0	NA	NA	NA	1	1	Orphan	c2c9_V-U4,cas3,DinG,csa3,DEDDh,cmr6gr7,cmr5gr11,cmr4gr7,csm6,cmr3gr5,cas10,cmr1gr7,csx1,cas14j,cas8b1,cas7,cas5,cas4,cas1,cas2,cas6,cas9,cas14k	NA|91aa|up_3|NZ_AP022557.1_3604624_3604897_-,NA|85aa|down_3|NZ_AP022557.1_3614053_3614308_+,NA|257aa|down_9|NZ_AP022557.1_3626032_3626803_+	NA|388aa|up_9|NZ_AP022557.1_3594399_3595563_+	TIGR02877, Stress_response_UPF0229_protein_YhbH, sporulation protein YhbH	NA|556aa|up_8|NZ_AP022557.1_3595742_3597410_-	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|211aa|up_7|NZ_AP022557.1_3598013_3598646_+	cd01406, SIR2-like, Sir2-like: Prokaryotic group of uncharacterized Sir2-like proteins which lack certain key catalytic residues and conserved zinc binding cysteines; and are members of the SIR2 superfamily of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|458aa|up_6|NZ_AP022557.1_3598730_3600104_+	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|318aa|up_5|NZ_AP022557.1_3600334_3601288_+	pfam13289, SIR2_2, SIR2-like domain	NA|193aa|up_4|NZ_AP022557.1_3603969_3604548_+	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|91aa|up_3|NZ_AP022557.1_3604624_3604897_-	NA	NA|135aa|up_2|NZ_AP022557.1_3605023_3605428_+	pfam08868, YugN, YugN-like family	NA|332aa|up_1|NZ_AP022557.1_3605424_3606420_-	pfam07885, Ion_trans_2, Ion channel	NA|66aa|up_0|NZ_AP022557.1_3606533_3606731_+	pfam08141, SspH, Small acid-soluble spore protein H family	NA|379aa|down_0|NZ_AP022557.1_3607176_3608313_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|1074aa|down_1|NZ_AP022557.1_3609001_3612223_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|167aa|down_2|NZ_AP022557.1_3613496_3613997_+	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]	NA|85aa|down_3|NZ_AP022557.1_3614053_3614308_+	NA	NA|293aa|down_4|NZ_AP022557.1_3614569_3615448_-	smart00318, SNc, Staphylococcal nuclease homologues	NA|203aa|down_5|NZ_AP022557.1_3616608_3617217_+	pfam04970, LRAT, Lecithin retinol acyltransferase	NA|488aa|down_6|NZ_AP022557.1_3617727_3619191_+	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain	NA|1731aa|down_7|NZ_AP022557.1_3619387_3624580_+	PRK12757, PRK12757, cell division protein FtsN; Provisional	NA|106aa|down_8|NZ_AP022557.1_3624809_3625127_+	cd00893, PI4Kc_III, Catalytic domain of Type III Phosphoinositide 4-kinase	NA|257aa|down_9|NZ_AP022557.1_3626032_3626803_+	NA
