The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP050097	Rhizobium leguminosarum bv. trifolii strain 9B chromosome, complete genome	4854976	508302	518277	4854976		Streptococcus_phage(12.5%)	9	NA	NA
WP_166470417.1|508302_510609_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	41.2	2.0e-126
WP_130669632.1|511276_511498_+	glutaredoxin-like protein NrdH	NA	V5UN81	Mycobacterium_phage	51.4	2.3e-16
WP_033179806.1|511512_511917_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A142F1R4	Bacillus_phage	44.0	1.1e-16
WP_166470418.1|511895_514100_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	52.1	3.9e-212
WP_166470419.1|514187_515162_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A160DHK0	Gordonia_phage	74.8	9.5e-139
WP_166470420.1|515266_516481_+	adenylate/guanylate cyclase domain-containing protein	NA	M1HLN3	Pelagibacter_phage	29.7	5.4e-14
WP_166470421.1|516485_517214_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	38.8	1.1e-41
WP_130739779.1|517210_517567_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_130739778.1|517566_518277_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2P1JXV3	Rhodococcus_phage	49.1	3.5e-50
>prophage 2
NZ_CP050097	Rhizobium leguminosarum bv. trifolii strain 9B chromosome, complete genome	4854976	1398695	1412145	4854976		Vibrio_phage(25.0%)	10	NA	NA
WP_033180668.1|1398695_1399901_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	32.8	7.4e-40
WP_018074031.1|1400170_1400626_+	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	38.7	5.3e-15
WP_033180224.1|1400629_1401520_-	hypothetical protein	NA	NA	NA	NA	NA
WP_130727234.1|1402190_1404200_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.7	1.9e-88
WP_033180227.1|1404199_1406068_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.7	1.4e-77
WP_033180228.1|1406136_1406865_+	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	42.4	1.8e-49
WP_033180229.1|1406929_1408117_+	glycine C-acetyltransferase	NA	D2TEZ5	Emiliania_huxleyi_virus	28.6	1.8e-38
WP_011652887.1|1408227_1409265_+	L-threonine 3-dehydrogenase	NA	R9TPW0	Vibrio_phage	68.6	7.1e-15
WP_003561203.1|1409274_1409622_+	GFA family protein	NA	NA	NA	NA	NA
WP_166470619.1|1410087_1412145_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.6	1.7e-36
>prophage 3
NZ_CP050097	Rhizobium leguminosarum bv. trifolii strain 9B chromosome, complete genome	4854976	2489311	2499537	4854976		uncultured_Mediterranean_phage(83.33%)	9	NA	NA
WP_003559389.1|2489311_2489821_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	59.4	4.2e-45
WP_003559387.1|2489849_2490422_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	53.2	5.7e-43
WP_003559385.1|2490464_2490959_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	35.9	6.7e-24
WP_130668326.1|2491095_2491383_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003539654.1|2491505_2491661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_130726838.1|2491997_2494835_-	DNA gyrase subunit A	NA	A0A1B1IVS2	uncultured_Mediterranean_phage	41.6	3.7e-74
WP_012757442.1|2495071_2495719_+	MarC family protein	NA	NA	NA	NA	NA
WP_130726837.1|2495818_2496331_-	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	73.7	1.2e-44
WP_033182639.1|2496615_2499537_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	61.9	0.0e+00
>prophage 4
NZ_CP050097	Rhizobium leguminosarum bv. trifolii strain 9B chromosome, complete genome	4854976	2753670	2767065	4854976	tRNA	uncultured_Mediterranean_phage(90.91%)	13	NA	NA
WP_166470996.1|2753670_2756211_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	49.0	2.2e-57
WP_003558894.1|2756256_2756604_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	39.1	2.4e-12
WP_166470997.1|2756810_2757683_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_033179913.1|2757839_2759444_-	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV24	Clostridium_phage	29.2	5.1e-12
WP_003558888.1|2759689_2760343_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.1	1.2e-15
WP_128402539.1|2760339_2761113_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	30.2	4.0e-23
WP_033179910.1|2761117_2762401_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.3	1.8e-97
WP_018241797.1|2762600_2763428_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	46.5	5.2e-53
WP_033179909.1|2763424_2764036_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_033179908.1|2764087_2764279_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	72.1	8.9e-09
WP_130739226.1|2764462_2765179_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	47.2	1.4e-38
WP_033179906.1|2765175_2766033_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	38.5	5.6e-34
WP_166470998.1|2766051_2767065_-	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	42.6	6.2e-24
>prophage 5
NZ_CP050097	Rhizobium leguminosarum bv. trifolii strain 9B chromosome, complete genome	4854976	3122246	3131258	4854976		Acanthamoeba_polyphaga_mimivirus(14.29%)	9	NA	NA
WP_130677404.1|3122246_3124223_+	glycosyltransferase family 1 protein	NA	A0A0G2Y9S0	Acanthamoeba_polyphaga_mimivirus	26.9	8.7e-06
WP_166471111.1|3124247_3124814_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A218MN57	uncultured_virus	42.5	3.7e-34
WP_130694247.1|3124831_3125887_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	51.5	5.4e-95
WP_166471112.1|3125890_3126778_+	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_033180392.1|3126788_3127658_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	59.2	6.8e-96
WP_033180393.1|3127737_3128349_-	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	35.4	1.2e-17
WP_166471113.1|3128348_3129470_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	33.2	8.7e-35
WP_003547190.1|3129473_3129950_-	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_003558306.1|3129959_3131258_-	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	51.0	1.9e-97
>prophage 1
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	0	3658	901131		Ochrobactrum_phage(50.0%)	2	NA	NA
WP_033183246.1|1197_2199_+	plasmid partitioning protein RepB	NA	A0A240F4U0	Ochrobactrum_phage	37.5	4.4e-54
WP_166471756.1|2353_3658_+	replication initiation protein RepC	NA	L7TKN6	Rhizobium_phage	28.5	3.8e-18
>prophage 2
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	13424	16071	901131		Mycoplasma_phage(33.33%)	3	NA	NA
WP_130679173.1|13424_14471_+	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	Q6GZ03	Mycoplasma_phage	52.8	1.8e-18
WP_130728302.1|14526_15276_+	glycerophosphoryl diester phosphodiesterase	NA	A0A1J0F961	Only_Syngen_Nebraska_virus	29.6	2.9e-18
WP_003562577.1|15285_16071_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	27.8	3.7e-16
>prophage 3
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	20569	21604	901131		Enterobacteria_phage(100.0%)	1	NA	NA
WP_130707982.1|20569_21604_+	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	27.9	4.0e-18
>prophage 4
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	28004	29150	901131		Bacillus_virus(100.0%)	1	NA	NA
WP_028744133.1|28004_29150_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G3M9Y6	Bacillus_virus	37.2	1.1e-24
>prophage 5
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	34241	36059	901131		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_033183227.1|34241_36059_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	34.0	3.6e-14
>prophage 6
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	50259	56141	901131		Bacillus_virus(50.0%)	5	NA	NA
WP_130742202.1|50259_52479_+	EAL domain-containing protein	NA	G3MA91	Bacillus_virus	27.9	2.9e-10
WP_003562529.1|53074_53914_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_028742556.1|54031_54694_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_011648868.1|54698_55358_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003562525.1|55370_56141_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	9.8e-30
>prophage 7
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	60051	60777	901131		Planktothrix_phage(100.0%)	1	NA	NA
WP_003562518.1|60051_60777_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	43.5	4.4e-32
>prophage 8
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	72580	73645	901131		Bacillus_virus(100.0%)	1	NA	NA
WP_166471765.1|72580_73645_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	37.3	5.0e-32
>prophage 9
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	81757	87318	901131		uncultured_Caudovirales_phage(50.0%)	4	NA	NA
WP_033183200.1|81757_83299_+	sodium:proton antiporter	NA	A0A2H4J178	uncultured_Caudovirales_phage	26.0	6.6e-09
WP_033183199.1|83389_84448_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_128459291.1|84693_85677_+	autoinducer 2 ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_130695968.1|85803_87318_+	sugar ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	26.3	1.8e-11
>prophage 10
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	98036	99581	901131		Staphylococcus_phage(100.0%)	1	NA	NA
WP_130742220.1|98036_99581_-	sugar ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.7	1.1e-19
>prophage 11
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	108560	109601	901131		Rhizobium_phage(100.0%)	1	NA	NA
WP_166471769.1|108560_109601_+	ATP-dependent DNA ligase	NA	A0A068CDF3	Rhizobium_phage	63.9	6.4e-125
>prophage 12
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	121355	127132	901131		Bacillus_virus(50.0%)	4	NA	NA
WP_033183171.1|121355_122423_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G3M9Y6	Bacillus_virus	34.5	2.0e-25
WP_033183170.1|122589_123576_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_033183169.1|123597_124326_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_166471770.1|124486_127132_-	DNA ligase D	NA	A0A068CDF3	Rhizobium_phage	39.3	2.2e-52
>prophage 13
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	135331	141735	901131		Oenococcus_phage(33.33%)	5	NA	NA
WP_166471772.1|135331_136522_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	24.0	1.6e-18
WP_033183160.1|136531_138268_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_033183159.1|138411_139131_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033183158.1|139156_140104_-	2-hydroxyacid dehydrogenase	NA	A0A1M7XU89	Cedratvirus	29.2	2.8e-18
WP_033183157.1|140100_141735_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	7.9e-21
>prophage 14
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	145313	150346	901131		Yersinia_phage(33.33%)	5	NA	NA
WP_033183153.1|145313_145796_-	NUDIX domain-containing protein	NA	A0A1V0DXM9	Yersinia_phage	45.0	6.8e-05
WP_166471773.1|146223_146904_+	redoxin domain-containing protein	NA	NA	NA	NA	NA
WP_130742246.1|146959_148030_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G3M9Y6	Bacillus_virus	32.2	5.4e-26
WP_033183150.1|148097_149396_-	D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit	NA	NA	NA	NA	NA
WP_033183149.1|149392_150346_-	SIS domain-containing protein	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	27.5	1.7e-10
>prophage 15
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	154372	155167	901131		Escherichia_phage(100.0%)	1	NA	NA
WP_033183145.1|154372_155167_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	31.4	1.9e-20
>prophage 16
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	158997	160812	901131		Pseudomonas_phage(100.0%)	1	NA	NA
WP_033183140.1|158997_160812_-	EAL domain-containing protein	NA	A0A2K8I9Y5	Pseudomonas_phage	44.3	3.1e-10
>prophage 17
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	173443	178348	901131		Moraxella_phage(50.0%)	4	NA	NA
WP_033183127.1|173443_175561_-	carboxy terminal-processing peptidase	NA	A0A0R6PIZ1	Moraxella_phage	31.8	6.6e-84
WP_130679090.1|175710_176190_-	MEKHLA domain-containing protein	NA	NA	NA	NA	NA
WP_033183126.1|176308_177499_-	amidohydrolase	NA	NA	NA	NA	NA
WP_033183125.1|177568_178348_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.2	1.3e-32
>prophage 18
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	186022	192011	901131		Brazilian_cedratvirus(50.0%)	5	NA	NA
WP_033183486.1|186022_187474_+	sugar ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.7	4.0e-08
WP_033183118.1|187470_188418_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_033183117.1|188414_189365_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_033183116.1|189379_190294_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_033183115.1|190379_192011_-	GMC family oxidoreductase	NA	A0A1V0S9M4	Catovirus	29.4	5.5e-46
>prophage 19
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	204115	204751	901131		Acinetobacter_phage(100.0%)	1	NA	NA
WP_166471783.1|204115_204751_-	aldehyde dehydrogenase iron-sulfur subunit	NA	A0A0P0IVM8	Acinetobacter_phage	32.4	4.6e-17
>prophage 20
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	208091	208916	901131		Bacillus_virus(100.0%)	1	NA	NA
WP_128459213.1|208091_208916_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.4	1.1e-34
>prophage 21
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	213636	221757	901131		uncultured_Caudovirales_phage(50.0%)	4	NA	NA
WP_166471978.1|213636_215514_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	38.4	5.9e-12
WP_166471788.1|215723_216443_+	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA	NA
WP_166471789.1|216415_217768_-	lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family protein	NA	NA	NA	NA	NA
WP_166471790.1|217764_221757_-	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	26.5	5.4e-55
>prophage 22
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	230553	231771	901131		Bacillus_phage(100.0%)	1	NA	NA
WP_033183084.1|230553_231771_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	31.7	3.5e-13
>prophage 23
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	237140	239111	901131		Bacillus_virus(50.0%)	2	NA	NA
WP_166471799.1|237140_238157_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.5	1.8e-10
WP_166471800.1|238157_239111_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	32.1	1.3e-23
>prophage 24
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	248627	250190	901131		Staphylococcus_phage(100.0%)	1	NA	NA
WP_033183074.1|248627_250190_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.8	2.3e-17
>prophage 25
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	265448	269042	901131		Planktothrix_phage(50.0%)	4	NA	NA
WP_033183064.1|265448_266510_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	34.5	2.9e-24
WP_130740388.1|266626_267100_-	ProQ/FINO family protein	NA	NA	NA	NA	NA
WP_033183062.1|267379_267994_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_166471980.1|268097_269042_-	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	27.5	3.4e-24
>prophage 26
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	273366	274188	901131		Ostreococcus_lucimarinus_virus(100.0%)	1	NA	NA
WP_166471812.1|273366_274188_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	M4QNT1	Ostreococcus_lucimarinus_virus	36.7	4.2e-39
>prophage 27
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	280560	283178	901131		Ectocarpus_siliculosus_virus(50.0%)	2	NA	NA
WP_130740381.1|280560_281223_+	response regulator transcription factor	NA	Q8QKV7	Ectocarpus_siliculosus_virus	31.2	1.9e-05
WP_130740380.1|281219_283178_+	PAS domain S-box protein	NA	A0A1V0SGX0	Hokovirus	30.1	1.6e-20
>prophage 28
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	286325	287855	901131		Staphylococcus_phage(100.0%)	1	NA	NA
WP_166471816.1|286325_287855_+	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	26.3	5.2e-22
>prophage 29
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	291183	292467	901131		Orpheovirus(100.0%)	1	NA	NA
WP_166471981.1|291183_292467_-	cystathionine gamma-synthase family protein	NA	A0A2I2L687	Orpheovirus	22.2	8.7e-07
>prophage 30
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	298933	300004	901131		Planktothrix_phage(100.0%)	1	NA	NA
WP_166471822.1|298933_300004_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	33.8	1.3e-24
>prophage 31
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	310437	316017	901131		Staphylococcus_phage(50.0%)	5	NA	NA
WP_130740364.1|310437_311988_-	sugar ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	5.1e-17
WP_166471825.1|311984_312629_-	DUF2291 domain-containing protein	NA	NA	NA	NA	NA
WP_003550404.1|312702_313644_-	D-ribose ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_130679019.1|313719_314547_-	NAD(P)-binding domain-containing protein	NA	NA	NA	NA	NA
WP_166471826.1|314679_316017_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	26.9	7.9e-19
>prophage 32
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	322701	323736	901131		Megavirus(100.0%)	1	NA	NA
WP_130740361.1|322701_323736_+	L-idonate 5-dehydrogenase	NA	K7Z7U2	Megavirus	24.3	1.2e-09
>prophage 33
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	327283	328790	901131		Bacillus_virus(50.0%)	2	NA	NA
WP_033183017.1|327283_328057_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	25.9	3.1e-15
WP_033183016.1|328046_328790_+	ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	27.1	4.3e-14
>prophage 34
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	335012	335816	901131		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_130670617.1|335012_335816_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	33.3	6.9e-10
>prophage 35
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	344996	346331	901131		Mycobacterium_phage(100.0%)	1	NA	NA
WP_033183002.1|344996_346331_-	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	23.9	7.0e-07
>prophage 36
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	365188	366862	901131		Bacillus_virus(100.0%)	1	NA	NA
WP_166471982.1|365188_366862_-	FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	30.0	6.0e-32
>prophage 37
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	370880	371852	901131		Mycobacterium_phage(100.0%)	1	NA	NA
WP_166471839.1|370880_371852_+	alpha/beta hydrolase	NA	A0A2D1GCA0	Mycobacterium_phage	26.1	1.4e-09
>prophage 38
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	379354	383197	901131		Planktothrix_phage(50.0%)	3	NA	NA
WP_166471842.1|379354_380986_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.0	5.5e-14
WP_130750924.1|381008_382229_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_166471843.1|382741_383197_+	NUDIX hydrolase	NA	I1TQR9	Pseudomonas_phage	32.8	2.4e-07
>prophage 39
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	403315	404512	901131	transposase	Corynebacterium_phage(100.0%)	1	NA	NA
WP_128409364.1|403315_404512_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	46.0	3.5e-90
>prophage 40
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	410095	411292	901131	transposase	Corynebacterium_phage(100.0%)	1	NA	NA
WP_128409364.1|410095_411292_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	46.0	3.5e-90
>prophage 41
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	420962	422459	901131		Tupanvirus(100.0%)	1	NA	NA
WP_166471869.1|420962_422459_-	S8 family serine peptidase	NA	A0A2K9L570	Tupanvirus	33.3	3.9e-22
>prophage 42
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	430108	431482	901131		Bacillus_phage(100.0%)	1	NA	NA
WP_166471872.1|430108_431482_+	S8 family serine peptidase	NA	U5J9E4	Bacillus_phage	30.2	2.0e-17
>prophage 43
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	463238	470045	901131		Bacillus_phage(50.0%)	4	NA	NA
WP_130708049.1|463238_468026_-	response regulator	NA	W8CYF6	Bacillus_phage	28.2	1.5e-22
WP_033184553.1|468776_469019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165402848.1|469091_469259_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033184552.1|469571_470045_+	Hsp20 family protein	NA	A0A2L0V0Y9	Agrobacterium_phage	47.6	1.5e-20
>prophage 44
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	481894	482419	901131		Acinetobacter_phage(100.0%)	1	NA	NA
WP_003554946.1|481894_482419_+	(2Fe-2S)-binding protein	NA	A0A0P0IVM8	Acinetobacter_phage	34.1	1.4e-11
>prophage 45
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	494028	495078	901131		Bacillus_virus(100.0%)	1	NA	NA
WP_003554931.1|494028_495078_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.8	1.1e-28
>prophage 46
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	500888	506219	901131		uncultured_Mediterranean_phage(50.0%)	4	NA	NA
WP_130727963.1|500888_502781_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	33.8	2.4e-101
WP_130727962.1|503190_503853_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_003554915.1|503984_504545_+	hypothetical protein	NA	NA	NA	NA	NA
WP_166471893.1|505298_506219_+	DUF1738 domain-containing protein	NA	A0A1V0EEV1	Caulobacter_phage	45.0	2.3e-62
>prophage 47
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	509239	510076	901131		Mycobacterium_phage(100.0%)	1	NA	NA
WP_003554910.1|509239_510076_-	alpha/beta hydrolase	NA	A0A249XU20	Mycobacterium_phage	25.8	2.3e-08
>prophage 48
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	518724	519384	901131		Planktothrix_phage(100.0%)	1	NA	NA
WP_003554893.1|518724_519384_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.1	1.3e-30
>prophage 49
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	524286	524526	901131		Pelagibacter_phage(100.0%)	1	NA	NA
WP_003554884.1|524286_524526_+	30S ribosomal protein S21	NA	M1HLV7	Pelagibacter_phage	57.1	1.8e-06
>prophage 50
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	536210	537572	901131		Klosneuvirus(100.0%)	1	NA	NA
WP_130727956.1|536210_537572_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	25.6	8.7e-13
>prophage 51
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	549450	551046	901131		Klosneuvirus(100.0%)	1	NA	NA
WP_003554849.1|549450_551046_+	GMC family oxidoreductase	NA	A0A1V0SI18	Klosneuvirus	32.0	5.1e-57
>prophage 52
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	554352	562573	901131		Bacillus_virus(40.0%)	9	NA	NA
WP_003554844.1|554352_555057_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	22.2	2.8e-07
WP_003554841.1|555056_555776_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.1	2.8e-10
WP_166471898.1|555791_556508_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	31.8	8.3e-15
WP_003554837.1|556518_557460_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003554835.1|557481_557871_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_003554834.1|557880_558660_-	molybdenum cofactor biosynthesis protein F	NA	NA	NA	NA	NA
WP_003554833.1|558673_559459_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	26.4	3.5e-06
WP_166471899.1|560627_560873_-	hypothetical protein	NA	NA	NA	NA	NA
WP_166471900.1|561835_562573_+	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	32.5	4.4e-11
>prophage 53
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	569992	571060	901131		Planktothrix_phage(100.0%)	1	NA	NA
WP_166471905.1|569992_571060_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.1	1.2e-22
>prophage 54
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	576211	577309	901131		Planktothrix_phage(100.0%)	1	NA	NA
WP_033184525.1|576211_577309_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	33.3	3.3e-23
>prophage 55
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	584136	585234	901131		Planktothrix_phage(100.0%)	1	NA	NA
WP_130727945.1|584136_585234_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.8	2.0e-23
>prophage 56
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	589800	594927	901131		Oenococcus_phage(25.0%)	5	NA	NA
WP_033184515.1|589800_590970_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	27.7	2.1e-31
WP_165405104.1|590966_591662_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_166471910.1|591687_592662_+	hydroxyacid dehydrogenase	NA	M1I4S0	Paramecium_bursaria_Chlorella_virus	26.9	5.8e-19
WP_033184512.1|592741_593818_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	7.8e-25
WP_130727939.1|593817_594927_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	45.8	1.4e-16
>prophage 57
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	608568	609396	901131		Mycobacterium_phage(100.0%)	1	NA	NA
WP_166471913.1|608568_609396_+	alpha/beta hydrolase	NA	A0A068F2G2	Mycobacterium_phage	28.3	3.9e-08
>prophage 58
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	614467	618725	901131		Trichoplusia_ni_ascovirus(33.33%)	5	NA	NA
WP_130740238.1|614467_615253_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	26.2	2.9e-05
WP_166471917.1|615293_616331_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_166471918.1|616327_617236_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_033183450.1|617232_617961_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.5	6.7e-12
WP_064655656.1|617957_618725_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	26.2	1.7e-10
>prophage 59
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	626175	627807	901131		Xanthomonas_phage(100.0%)	1	NA	NA
WP_166471921.1|626175_627807_-	proline dehydrogenase	NA	A0A292GAM4	Xanthomonas_phage	28.9	6.0e-37
>prophage 60
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	637582	644918	901131		Staphylococcus_phage(33.33%)	5	NA	NA
WP_166471928.1|637582_639169_+	AMP-binding protein	NA	A0A2H4PQM9	Staphylococcus_phage	27.6	9.4e-35
WP_166471929.1|639211_640036_+	p-hydroxycinnamoyl CoA hydratase/lyase	NA	NA	NA	NA	NA
WP_166471930.1|640093_641200_+	NAD(P)-dependent alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	27.3	5.6e-26
WP_166471931.1|641221_642661_+	coniferyl aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_166471932.1|642989_644918_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	36.8	2.6e-18
>prophage 61
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	649767	650847	901131		Bacillus_virus(100.0%)	1	NA	NA
WP_166471936.1|649767_650847_-	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.7	1.6e-30
>prophage 62
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	659841	667169	901131		Prochlorococcus_phage(33.33%)	7	NA	NA
WP_033183419.1|659841_660969_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	A0A0K0KVL7	Prochlorococcus_phage	29.0	4.3e-34
WP_033183418.1|660972_661809_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_033183417.1|661863_662436_+	S-(hydroxymethyl)glutathione synthase	NA	NA	NA	NA	NA
WP_033183416.1|662762_663776_+	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
WP_033183415.1|663835_664927_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	A0A1D8KTE3	Synechococcus_phage	44.6	9.4e-10
WP_033183414.1|664916_666170_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
WP_033183413.1|666281_667169_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	28.1	8.4e-25
>prophage 63
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	680562	683154	901131		Oenococcus_phage(100.0%)	2	NA	NA
WP_166471945.1|680562_681924_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	27.7	2.1e-30
WP_166471946.1|681987_683154_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	30.2	5.6e-45
>prophage 64
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	687535	689830	901131		Bacillus_virus(50.0%)	2	NA	NA
WP_128450170.1|687535_688633_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.0	5.2e-24
WP_166471947.1|688666_689830_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	34.6	5.8e-50
>prophage 65
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	696729	700339	901131		Bacillus_virus(50.0%)	3	NA	NA
WP_033183392.1|696729_697776_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G3M9Y6	Bacillus_virus	32.2	4.4e-25
WP_130711200.1|698141_698390_+	hypothetical protein	NA	NA	NA	NA	NA
WP_018480207.1|698872_700339_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	34.6	1.0e-67
>prophage 66
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	704399	705194	901131		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_033183387.1|704399_705194_+	sugar ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	31.6	7.0e-15
>prophage 67
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	708562	709924	901131		Bacillus_thuringiensis_phage(50.0%)	2	NA	NA
WP_166471991.1|708562_709258_-	SDR family NAD(P)-dependent oxidoreductase	NA	Q56AQ6	Bacillus_thuringiensis_phage	34.7	1.7e-20
WP_166471949.1|709315_709924_-	GTP cyclohydrolase I FolE	NA	A0A172Q012	Pseudomonas_phage	49.2	4.0e-42
>prophage 68
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	721593	723249	901131		Planktothrix_phage(100.0%)	1	NA	NA
WP_130670713.1|721593_723249_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.5	7.8e-16
>prophage 69
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	730134	735090	901131		Escherichia_phage(75.0%)	5	NA	NA
WP_130727856.1|730134_731415_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	41.1	2.1e-69
WP_130727855.1|731418_732195_-	TIM barrel protein	NA	NA	NA	NA	NA
WP_130727854.1|732209_733154_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	50.9	1.1e-70
WP_130727853.1|733400_734399_+	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	26.6	3.4e-14
WP_017956779.1|734415_735090_+	aldolase	NA	A0A077SK32	Escherichia_phage	49.8	3.4e-50
>prophage 70
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	750043	750967	901131		Brazilian_cedratvirus(100.0%)	1	NA	NA
WP_130727846.1|750043_750967_-	glyoxylate/hydroxypyruvate reductase A	NA	A0A2R8FDS8	Brazilian_cedratvirus	26.6	5.5e-11
>prophage 71
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	760943	764953	901131		uncultured_virus(66.67%)	6	NA	NA
WP_033183340.1|760943_762572_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	60.7	3.9e-177
WP_033183339.1|762725_763040_-	co-chaperone GroES	NA	A0A221S4G8	uncultured_virus	55.3	2.0e-21
WP_130727835.1|763386_763677_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033183337.1|763785_764148_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033183336.1|764201_764528_+	DUF2934 domain-containing protein	NA	NA	NA	NA	NA
WP_032981504.1|764533_764953_+	HD domain-containing protein	NA	A0A0F7L746	uncultured_marine_virus	37.9	2.3e-12
>prophage 72
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	769860	770970	901131		Bacillus_virus(100.0%)	1	NA	NA
WP_033183331.1|769860_770970_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G3M9Y6	Bacillus_virus	33.2	8.6e-27
>prophage 73
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	778598	782580	901131		Bacillus_thuringiensis_phage(33.33%)	4	NA	NA
WP_033183324.1|778598_779267_+	response regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	30.4	6.6e-06
WP_166471959.1|779256_780657_+	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	26.7	7.0e-18
WP_033183322.1|780868_781750_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003562834.1|781761_782580_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.8	5.0e-32
>prophage 74
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	787430	789575	901131		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_130741989.1|787430_789575_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	57.1	3.8e-07
>prophage 75
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	797684	798791	901131		Planktothrix_phage(100.0%)	1	NA	NA
WP_166471962.1|797684_798791_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	36.0	8.9e-24
>prophage 76
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	803636	804677	901131		Enterobacteria_phage(100.0%)	1	NA	NA
WP_128460604.1|803636_804677_-	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	23.8	2.7e-14
>prophage 77
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	807684	815565	901131		Leptospira_phage(50.0%)	4	NA	NA
WP_166471964.1|807684_810756_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	20.0	1.9e-36
WP_166471965.1|810832_812014_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_166471966.1|812165_813617_+	NCS1 family nucleobase:cation symporter-1	NA	NA	NA	NA	NA
WP_166471967.1|813684_815565_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	37.1	1.6e-12
>prophage 78
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	828100	828862	901131		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_130707998.1|828100_828862_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.0	5.9e-11
>prophage 79
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	846059	847595	901131		Planktothrix_phage(100.0%)	1	NA	NA
WP_166471973.1|846059_847595_+	amino acid ABC transporter permease/ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.9	2.2e-28
>prophage 80
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	859398	860937	901131		Bacillus_virus(100.0%)	1	NA	NA
WP_130740459.1|859398_860937_+	sugar ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	23.9	1.2e-10
>prophage 81
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	868090	870267	901131		Catovirus(50.0%)	2	NA	NA
WP_130684492.1|868090_869716_+	GMC family oxidoreductase	NA	A0A1V0S9J5	Catovirus	30.2	1.2e-56
WP_003550088.1|870063_870267_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	53.4	4.3e-09
>prophage 82
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	873405	874149	901131		Planktothrix_phage(100.0%)	1	NA	NA
WP_033183264.1|873405_874149_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.9	8.6e-23
>prophage 83
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	880679	881510	901131		Klosneuvirus(100.0%)	1	NA	NA
WP_033183258.1|880679_881510_-	NAD(P)-dependent oxidoreductase	NA	A0A1V0SKV4	Klosneuvirus	28.4	7.4e-07
>prophage 84
NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	901131	886745	898684	901131		Oenococcus_phage(33.33%)	10	NA	NA
WP_033183257.1|886745_888467_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.7	1.0e-18
WP_166471976.1|888463_889675_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	34.8	1.6e-50
WP_033183255.1|889687_890875_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	31.2	2.1e-47
WP_166471977.1|891059_891632_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_033183493.1|891710_892376_-	nitroreductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	33.2	7.7e-23
WP_033183253.1|892783_893137_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_033183252.1|893336_894029_-	response regulator transcription factor	NA	Q8QKV7	Ectocarpus_siliculosus_virus	28.7	7.5e-05
WP_003550117.1|894030_894408_-	response regulator	NA	NA	NA	NA	NA
WP_033183251.1|894410_895052_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_130727776.1|895048_898684_-	PAS domain-containing protein	NA	W8CYF6	Bacillus_phage	22.6	8.5e-07
>prophage 1
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	0	3558	464641		Rhizobium_phage(100.0%)	2	NA	NA
WP_130740529.1|1192_2188_+	plasmid partitioning protein RepB	NA	NA	NA	NA	NA
WP_166471994.1|2343_3558_+	replication initiation protein RepC	NA	L7TKN6	Rhizobium_phage	28.9	1.6e-18
>prophage 2
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	7928	10454	464641		uncultured_virus(100.0%)	1	NA	NA
WP_166471998.1|7928_10454_-	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	35.8	2.1e-84
>prophage 3
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	29704	38288	464641		Bacillus_phage(66.67%)	5	NA	NA
WP_166472006.1|29704_31603_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	28.8	2.6e-23
WP_130685178.1|31831_33640_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.2	6.7e-45
WP_130685077.1|33914_34532_+	flavodoxin family protein	NA	NA	NA	NA	NA
WP_033183800.1|34884_36291_+	hypothetical protein	NA	NA	NA	NA	NA
WP_130685079.1|36359_38288_+	PAS domain-containing hybrid sensor histidine kinase/response regulator	NA	W8CYM9	Bacillus_phage	30.1	8.5e-06
>prophage 4
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	45884	48599	464641		Klosneuvirus(100.0%)	1	NA	NA
WP_033183793.1|45884_48599_-	ATP-binding cassette domain-containing protein	NA	A0A1V0SJ29	Klosneuvirus	24.2	6.0e-05
>prophage 5
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	56566	65526	464641		Planktothrix_phage(33.33%)	6	NA	NA
WP_033183787.1|56566_58456_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	9.2e-21
WP_033183786.1|58610_59954_-	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA	NA
WP_033183785.1|60461_61799_+	nucleotide sugar dehydrogenase	NA	M1HZW8	Acanthocystis_turfacea_Chlorella_virus	30.5	5.5e-36
WP_033183784.1|61788_62964_-	DUF3095 domain-containing protein	NA	NA	NA	NA	NA
WP_033183783.1|63189_63669_+	hypothetical protein	NA	NA	NA	NA	NA
WP_166472007.1|63735_65526_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.6	3.6e-35
>prophage 6
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	80841	84348	464641		Planktothrix_phage(50.0%)	4	NA	NA
WP_165402099.1|80841_81570_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.6	8.1e-34
WP_130704272.1|81623_82691_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_033183767.1|82695_83526_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_166472010.1|83580_84348_-	glucose 1-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	34.0	9.8e-22
>prophage 7
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	94904	95534	464641		Yellowstone_lake_phycodnavirus(100.0%)	1	NA	NA
WP_033183752.1|94904_95534_-	DnaJ domain-containing protein	NA	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	50.0	8.3e-11
>prophage 8
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	98811	100347	464641		Catovirus(100.0%)	1	NA	NA
WP_130740544.1|98811_100347_-	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	36.5	3.1e-75
>prophage 9
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	107434	109695	464641		Planktothrix_phage(50.0%)	2	NA	NA
WP_027687824.1|107434_108211_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	35.3	4.9e-29
WP_166472018.1|108207_109695_+	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	33.1	2.7e-44
>prophage 10
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	123849	124692	464641		Bordetella_phage(100.0%)	1	NA	NA
WP_075225222.1|123849_124692_-	AraC family transcriptional regulator	NA	A0A291LAM3	Bordetella_phage	35.5	3.0e-08
>prophage 11
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	130885	132553	464641		Planktothrix_phage(100.0%)	1	NA	NA
WP_166472026.1|130885_132553_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	7.9e-16
>prophage 12
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	143699	144785	464641		Bacillus_virus(100.0%)	1	NA	NA
WP_166472032.1|143699_144785_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	29.3	3.0e-24
>prophage 13
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	150344	151241	464641		Bacillus_phage(100.0%)	1	NA	NA
WP_166472036.1|150344_151241_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	34.4	6.3e-12
>prophage 14
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	155546	157345	464641		Planktothrix_phage(50.0%)	2	NA	NA
WP_166472041.1|155546_156359_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.7	6.1e-14
WP_003554069.1|156355_157345_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.5	2.2e-13
>prophage 15
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	173176	177254	464641		Diadromus_pulchellus_ascovirus(50.0%)	3	NA	NA
WP_130671097.1|173176_173971_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	27.8	2.0e-09
WP_033183691.1|174074_176231_+	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_033183690.1|176246_177254_+	DNA topoisomerase IB	NA	A0A0U2TSJ7	Niemeyer_virus	29.8	4.4e-30
>prophage 16
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	186128	190278	464641		Burkholderia_virus(50.0%)	4	NA	NA
WP_166472049.1|186128_187019_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	28.2	4.2e-16
WP_166472050.1|187718_187997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033183682.1|188386_189109_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_166472051.1|189105_190278_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	A0A0B5JD48	Pandoravirus	32.0	6.7e-14
>prophage 17
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	193556	198131	464641		Planktothrix_phage(66.67%)	4	NA	NA
WP_166472053.1|193556_194615_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	35.0	1.0e-24
WP_166472054.1|194761_195994_+	peptidase T	NA	NA	NA	NA	NA
WP_166472055.1|196030_196867_-	cell wall hydrolase	NA	A0A142EZU6	Stenotrophomonas_phage	30.7	9.7e-07
WP_033183677.1|197090_198131_-	sulfate/molybdate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.8	3.2e-31
>prophage 18
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	202901	214891	464641		Bacillus_phage(20.0%)	10	NA	NA
WP_033183671.1|202901_203594_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	31.1	3.4e-21
WP_033183670.1|203590_206299_-	sensor histidine kinase KdpD	NA	Q8QNA2	Ectocarpus_siliculosus_virus	33.7	1.5e-11
WP_033183669.1|206602_207172_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_033183668.1|207247_209308_-	potassium-transporting ATPase subunit KdpB	NA	E4ZFI9	Streptococcus_phage	28.9	2.5e-35
WP_165402870.1|209352_209508_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033183667.1|209517_211221_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_003547774.1|211290_211380_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_033183665.1|211871_212915_+	NAD(P)-dependent alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	24.4	2.6e-09
WP_033183664.1|212929_213499_-	DedA family protein	NA	NA	NA	NA	NA
WP_033183663.1|213529_214891_-	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	35.0	1.1e-63
>prophage 19
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	219522	225511	464641	holin	Bacillus_virus(25.0%)	6	NA	NA
WP_033183658.1|219522_220305_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	28.1	2.4e-15
WP_166472058.1|220304_221006_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.5	1.5e-13
WP_033183656.1|221010_221898_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_033183655.1|221899_222889_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_166472059.1|223024_224620_+|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	31.4	6.7e-57
WP_166472060.1|224629_225511_+	3-hydroxyisobutyrate dehydrogenase	NA	A0A077SLF7	Escherichia_phage	30.2	3.5e-23
>prophage 20
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	230072	233537	464641		Amsacta_moorei_entomopoxvirus(50.0%)	3	NA	NA
WP_166472064.1|230072_231608_-	sugar ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	25.3	1.7e-12
WP_024320014.1|231680_232676_-	rhamnose ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011655152.1|232724_233537_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	28.4	3.1e-18
>prophage 21
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	246827	248336	464641	holin	Catovirus(100.0%)	1	NA	NA
WP_166472072.1|246827_248336_-|holin	choline-sulfatase	holin	A0A1V0SA98	Catovirus	26.4	7.8e-23
>prophage 22
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	251349	253049	464641		Planktothrix_phage(50.0%)	2	NA	NA
WP_166472075.1|251349_252249_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.4	2.2e-17
WP_166472076.1|252245_253049_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.1	3.3e-12
>prophage 23
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	260930	263560	464641		Planktothrix_phage(50.0%)	2	NA	NA
WP_166472081.1|260930_262619_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.0	6.1e-16
WP_166472082.1|262615_263560_-	acetamidase/formamidase family protein	NA	A0A1V0S8X7	Catovirus	29.1	7.3e-27
>prophage 24
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	275067	276900	464641		Planktothrix_phage(100.0%)	1	NA	NA
WP_130708119.1|275067_276900_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	4.1e-18
>prophage 25
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	289789	295148	464641		Staphylococcus_phage(33.33%)	5	NA	NA
WP_033183595.1|289789_290497_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.9	4.8e-15
WP_166472100.1|290489_292253_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	30.5	2.2e-16
WP_130684860.1|292239_293073_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_166472101.1|293124_294273_-	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_166472102.1|294302_295148_-	hydratase	NA	M1HUK8	Acanthocystis_turfacea_Chlorella_virus	34.2	6.5e-27
>prophage 26
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	301255	302884	464641		Planktothrix_phage(100.0%)	1	NA	NA
WP_033183585.1|301255_302884_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.2	1.8e-25
>prophage 27
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	313703	314837	464641		Planktothrix_phage(100.0%)	1	NA	NA
WP_130724525.1|313703_314837_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	34.5	1.0e-22
>prophage 28
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	326459	334091	464641		Bordetella_phage(25.0%)	8	NA	NA
WP_166472116.1|326459_327200_+	helix-turn-helix transcriptional regulator	NA	A0A291LAM3	Bordetella_phage	46.1	9.5e-14
WP_166472117.1|327305_328307_-	NADP-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_166472118.1|328357_329173_-	oxidoreductase	NA	NA	NA	NA	NA
WP_166472119.1|329263_329740_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_166472120.1|329827_331849_-	beta-N-acetylhexosaminidase	NA	A0A2H4UUW7	Bodo_saltans_virus	25.3	8.9e-06
WP_033183562.1|331870_332341_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_033183561.1|332352_333279_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.9	3.2e-19
WP_033183560.1|333275_334091_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	26.6	1.5e-12
>prophage 29
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	341641	342430	464641		Caulobacter_phage(100.0%)	1	NA	NA
WP_130684893.1|341641_342430_-	DNA polymerase III subunit epsilon	NA	A0A0K1LLS9	Caulobacter_phage	36.4	1.2e-30
>prophage 30
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	348543	355929	464641		Trichoplusia_ni_ascovirus(33.33%)	9	NA	NA
WP_033183549.1|348543_349299_-	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA	Q06VL0	Trichoplusia_ni_ascovirus	34.3	2.8e-21
WP_130684903.1|349304_350141_-	5-dehydro-4-deoxy-D-glucuronate isomerase	NA	NA	NA	NA	NA
WP_130684905.1|350244_350613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003548073.1|350764_350911_-	DUF1127 domain-containing protein	NA	NA	NA	NA	NA
WP_130684907.1|351094_352075_-	3'-5' exonuclease	NA	U5Q053	Bacillus_virus	37.3	1.3e-07
WP_033183546.1|352171_353551_-	histidine kinase	NA	NA	NA	NA	NA
WP_033183545.1|353547_354222_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_166472123.1|354343_354943_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_166472124.1|355038_355929_-	haloalkane dehalogenase	NA	B9U1C3	Vaccinia_virus	34.9	4.0e-43
>prophage 31
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	360152	365100	464641		Bacillus_virus(33.33%)	5	NA	NA
WP_130684925.1|360152_361262_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.0	1.4e-24
WP_128459519.1|361284_362445_+	spermidine/putrescine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_130684927.1|362649_363516_+	ABC transporter permease	NA	Q6GZ02	Mycoplasma_phage	26.9	5.7e-10
WP_130684929.1|363515_364325_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_033183535.1|364338_365100_+	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	40.8	5.0e-10
>prophage 32
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	369934	370144	464641		uncultured_virus(100.0%)	1	NA	NA
WP_003548109.1|369934_370144_+	cold-shock protein	NA	A0A218MMZ6	uncultured_virus	54.7	8.9e-10
>prophage 33
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	379305	380190	464641		Synechococcus_phage(100.0%)	1	NA	NA
WP_003548134.1|379305_380190_-	formyltetrahydrofolate deformylase	NA	M4QRX9	Synechococcus_phage	40.4	6.9e-11
>prophage 34
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	383746	384655	464641		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_033183524.1|383746_384655_-	glutamine amidotransferase family protein	NA	F2Y1G4	Organic_Lake_phycodnavirus	29.2	1.1e-06
>prophage 35
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	415638	419368	464641	protease	Yaba_monkey_tumor_virus(50.0%)	2	NA	NA
WP_130680117.1|415638_416823_-	serpin family protein	NA	Q6TUM5	Yaba_monkey_tumor_virus	27.3	2.0e-13
WP_166472129.1|416836_419368_-|protease	trypsin-like serine protease	protease	Q6JKF3	Neodiprion_sertifer_nucleopolyhedrovirus	33.1	1.5e-26
>prophage 36
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	426637	427063	464641	tail	Brucella_phage(100.0%)	1	NA	NA
WP_130708056.1|426637_427063_-|tail	tail fiber domain-containing protein	tail	X2CY28	Brucella_phage	56.2	3.0e-12
>prophage 37
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	434636	435041	464641		Sinorhizobium_phage(100.0%)	1	NA	NA
WP_003553384.1|434636_435041_+	helix-turn-helix transcriptional regulator	NA	Q8W6G2	Sinorhizobium_phage	44.0	2.6e-18
>prophage 38
NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	464641	444540	445314	464641		Bacillus_virus(100.0%)	1	NA	NA
WP_033183841.1|444540_445314_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	39.8	2.5e-33
