assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011604545.1_ASM1160454v1	NZ_CP050108	Rhizobium leguminosarum bv. trifolii strain 3B chromosome, complete genome	1	1091062-1091148	1	CRISPRCasFinder	no		csa3,DEDDh,cas3,WYL	Orphan	TGCGCAATTCCGGACGCAAAACCGCTACACA	31	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL	NA|246aa|up_9|NZ_CP050108.1_1082820_1083558_+,NA|57aa|up_7|NZ_CP050108.1_1085409_1085580_-,NA|76aa|up_6|NZ_CP050108.1_1085725_1085953_+,NA|65aa|up_4|NZ_CP050108.1_1086483_1086678_+,NA|67aa|up_3|NZ_CP050108.1_1086803_1087004_+,NA	NA|246aa|up_9|NZ_CP050108.1_1082820_1083558_+	NA	NA|498aa|up_8|NZ_CP050108.1_1083577_1085071_-	PRK06834, PRK06834, hypothetical protein; Provisional	NA|57aa|up_7|NZ_CP050108.1_1085409_1085580_-	NA	NA|76aa|up_6|NZ_CP050108.1_1085725_1085953_+	NA	NA|68aa|up_5|NZ_CP050108.1_1086024_1086228_-	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown]	NA|65aa|up_4|NZ_CP050108.1_1086483_1086678_+	NA	NA|67aa|up_3|NZ_CP050108.1_1086803_1087004_+	NA	NA|208aa|up_2|NZ_CP050108.1_1087834_1088458_+	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane]	NA|250aa|up_1|NZ_CP050108.1_1089071_1089821_+	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	NA|312aa|up_0|NZ_CP050108.1_1090063_1090999_+	cd07720, OPHC2-like_MBL-fold, Pseudomonas pseudoalcaligenes organophosphorus hydrolase C2, and related proteins; MBL-fold metallo hydrolase domain	NA|321aa|down_0|NZ_CP050108.1_1091213_1092176_+	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|404aa|down_1|NZ_CP050108.1_1092143_1093355_-	PRK07494, PRK07494, UbiH/UbiF family hydroxylase	NA|171aa|down_2|NZ_CP050108.1_1093444_1093957_-	COG3749, COG3749, Uncharacterized protein conserved in bacteria [Function unknown]	NA|557aa|down_3|NZ_CP050108.1_1093967_1095638_-	COG0155, CysI, Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism]	NA|105aa|down_4|NZ_CP050108.1_1095646_1095961_-	pfam11011, DUF2849, Protein of unknown function (DUF2849)	NA|479aa|down_5|NZ_CP050108.1_1095963_1097400_-	cd11642, SUMT, Uroporphyrin-III C-methyltransferase (also known as S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT)	NA|196aa|down_6|NZ_CP050108.1_1097668_1098256_+	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|282aa|down_7|NZ_CP050108.1_1098276_1099122_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|442aa|down_8|NZ_CP050108.1_1099153_1100479_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|81aa|down_9|NZ_CP050108.1_1100556_1100799_-	PRK00395, hfq, RNA-binding protein Hfq; Provisional
GCF_011604545.1_ASM1160454v1	NZ_CP050108	Rhizobium leguminosarum bv. trifolii strain 3B chromosome, complete genome	2	2254079-2254158	2	CRISPRCasFinder	no		csa3,DEDDh,cas3,WYL	Orphan	AAAACCGCTCACACTTTCCGGCA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL	NA,NA	NA|263aa|up_9|NZ_CP050108.1_2243396_2244185_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|380aa|up_8|NZ_CP050108.1_2244184_2245324_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|74aa|up_7|NZ_CP050108.1_2245450_2245672_-	PLN03138, PLN03138, Protein TOC75; Provisional	NA|515aa|up_6|NZ_CP050108.1_2245839_2247384_-	PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed	NA|204aa|up_5|NZ_CP050108.1_2249526_2250138_+	pfam13563, 2_5_RNA_ligase2, 2'-5' RNA ligase superfamily	NA|134aa|up_4|NZ_CP050108.1_2250175_2250577_-	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|312aa|up_3|NZ_CP050108.1_2250860_2251796_+	cd11599, HDAC_classII_2, Histone deacetylases and histone-like deacetylases, classII	NA|84aa|up_2|NZ_CP050108.1_2251798_2252050_+	PRK00977, PRK00977, exodeoxyribonuclease VII small subunit; Provisional	NA|256aa|up_1|NZ_CP050108.1_2252138_2252906_+	cd05233, SDR_c, classical (c) SDRs	NA|308aa|up_0|NZ_CP050108.1_2253115_2254039_+	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|639aa|down_0|NZ_CP050108.1_2254261_2256178_+	COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]	NA|646aa|down_1|NZ_CP050108.1_2256298_2258236_-	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|333aa|down_2|NZ_CP050108.1_2258455_2259454_-	pfam14415, DUF4424, Domain of unknown function (DUF4424)	NA|249aa|down_3|NZ_CP050108.1_2259586_2260333_+	COG1189, COG1189, Predicted rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|417aa|down_4|NZ_CP050108.1_2260329_2261580_+	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]	NA|337aa|down_5|NZ_CP050108.1_2261582_2262593_+	cd16283, RomA-like_MBL-fold, Enterobacter cloacae RomA and related proteins; MBL-fold metallo hydrolase domain	NA|252aa|down_6|NZ_CP050108.1_2262673_2263429_-	PRK06023, PRK06023, crotonase/enoyl-CoA hydratase family protein	NA|593aa|down_7|NZ_CP050108.1_2263438_2265217_-	cd01153, ACAD_fadE5, Putative acyl-CoA dehydrogenases similar to fadE5	NA|332aa|down_8|NZ_CP050108.1_2265425_2266421_+	cd12834, ZntB_u1, Uncharacterized bacterial subgroup of the Salmonella typhimurium Zn2+ transporter ZntB-like subfamily	NA|162aa|down_9|NZ_CP050108.1_2266514_2267000_-	pfam07886, BA14K, BA14K-like protein
GCF_011604545.1_ASM1160454v1	NZ_CP050108	Rhizobium leguminosarum bv. trifolii strain 3B chromosome, complete genome	3	2315465-2315547	3	CRISPRCasFinder	no		csa3,DEDDh,cas3,WYL	Orphan	CACACTTCCGGGCGACATGCATTA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL	NA|79aa|up_0|NZ_CP050108.1_2315187_2315424_+,NA|133aa|down_0|NZ_CP050108.1_2316798_2317197_-	NA|230aa|up_9|NZ_CP050108.1_2307197_2307887_+	PRK00015, rnhB, ribonuclease HII; Validated	NA|164aa|up_8|NZ_CP050108.1_2307979_2308471_-	PRK09173, PRK09173, F0F1 ATP synthase subunit B; Validated	NA|208aa|up_7|NZ_CP050108.1_2308474_2309098_-	PRK09174, PRK09174, F0F1 ATP synthase subunit B	NA|76aa|up_6|NZ_CP050108.1_2309175_2309403_-	PRK07558, PRK07558, F0F1 ATP synthase subunit C; Validated	NA|251aa|up_5|NZ_CP050108.1_2309470_2310223_-	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated	NA|111aa|up_4|NZ_CP050108.1_2310285_2310618_-	COG5336, COG5336, Uncharacterized protein conserved in bacteria [Function unknown]	NA|404aa|up_3|NZ_CP050108.1_2310889_2312101_-	COG3773, SleB, Cell wall hydrolyses involved in spore germination [Cell envelope biogenesis, outer membrane]	NA|633aa|up_2|NZ_CP050108.1_2312253_2314152_-	COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	NA|326aa|up_1|NZ_CP050108.1_2314170_2315148_-	cd12837, EcCorA-like_u1, uncharacterized subgroup of the Escherichia coli Mg2+ transporter CorA_like subfamily	NA|79aa|up_0|NZ_CP050108.1_2315187_2315424_+	NA	NA|133aa|down_0|NZ_CP050108.1_2316798_2317197_-	NA	NA|245aa|down_1|NZ_CP050108.1_2317342_2318077_-	TIGR03541, reg_near_HchA, LuxR family transcriptional regulatory, chaperone HchA-associated	NA|266aa|down_2|NZ_CP050108.1_2318331_2319129_-	COG1414, IclR, Transcriptional regulator [Transcription]	NA|255aa|down_3|NZ_CP050108.1_2319240_2320005_+	cd05233, SDR_c, classical (c) SDRs	NA|306aa|down_4|NZ_CP050108.1_2320004_2320922_+	pfam05035, DGOK, 2-keto-3-deoxy-galactonokinase	NA|214aa|down_5|NZ_CP050108.1_2320935_2321577_+	PRK09140, PRK09140, 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed	NA|296aa|down_6|NZ_CP050108.1_2321573_2322461_+	COG3386, COG3386, Gluconolactonase [Carbohydrate transport and metabolism]	NA|202aa|down_7|NZ_CP050108.1_2322694_2323300_+	pfam05239, PRC, PRC-barrel domain	NA|455aa|down_8|NZ_CP050108.1_2323353_2324718_-	COG5001, COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms]	NA|574aa|down_9|NZ_CP050108.1_2324844_2326566_-	cd17546, REC_hyHK_CKI1_RcsC-like, phosphoacceptor receiver (REC) domain of hybrid sensor histidine kinases/response regulators similar to Arabidopsis thaliana CKI1 and Escherichia coli RcsC
