assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011617705.1_ASM1161770v1	NZ_CP050154	Brevibacterium sp. o2 chromosome, complete genome	1	192348-192429	1	CRISPRCasFinder	no		csa3,WYL,RT,DEDDh,DinG,cas4,cas3	Orphan	GCCGCCTCGGTGTGGGCCGGACCTCG	26	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,DEDDh,DinG,cas4,cas3	NA|267aa|up_4|NZ_CP050154.1_187131_187932_+,NA|82aa|up_2|NZ_CP050154.1_189731_189977_+,NA|231aa|up_1|NZ_CP050154.1_189973_190666_+,NA|506aa|up_0|NZ_CP050154.1_190732_192250_+,NA|322aa|down_4|NZ_CP050154.1_198017_198983_-	NA|649aa|up_9|NZ_CP050154.1_178219_180166_+	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|534aa|up_8|NZ_CP050154.1_180217_181819_-	PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed	NA|400aa|up_7|NZ_CP050154.1_181868_183068_+	cd06813, PLPDE_III_DSD_D-TA_like_2, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes Similar to D-Serine Dehydratase and D-Threonine Aldolase, Unknown Group 2	NA|453aa|up_6|NZ_CP050154.1_183064_184423_+	TIGR01679, bact_FAD_ox, FAD-linked oxidoreductase	NA|430aa|up_5|NZ_CP050154.1_185618_186908_+	TIGR00883, Putative_metabolite_transport_protein, metabolite-proton symporter	NA|267aa|up_4|NZ_CP050154.1_187131_187932_+	NA	NA|478aa|up_3|NZ_CP050154.1_188047_189481_-	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|82aa|up_2|NZ_CP050154.1_189731_189977_+	NA	NA|231aa|up_1|NZ_CP050154.1_189973_190666_+	NA	NA|506aa|up_0|NZ_CP050154.1_190732_192250_+	NA	NA|385aa|down_0|NZ_CP050154.1_192763_193918_+	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit	NA|326aa|down_1|NZ_CP050154.1_193917_194895_+	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|478aa|down_2|NZ_CP050154.1_194913_196347_+	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|273aa|down_3|NZ_CP050154.1_196942_197761_-	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|322aa|down_4|NZ_CP050154.1_198017_198983_-	NA	NA|79aa|down_5|NZ_CP050154.1_199549_199786_+	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|56aa|down_6|NZ_CP050154.1_199785_199953_+	PRK00595, rpmG, 50S ribosomal protein L33; Validated	NA|102aa|down_7|NZ_CP050154.1_199959_200265_+	PRK08881, rpsN, 30S ribosomal protein S14; Reviewed	NA|96aa|down_8|NZ_CP050154.1_200334_200622_+	cd14435, SPO1_TF1_like, Bacteriophage SPO1-encoded TF1 binds and bends DNA	NA|686aa|down_9|NZ_CP050154.1_200839_202897_+	pfam09678, Caa3_CtaG, Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
GCF_011617705.1_ASM1161770v1	NZ_CP050154	Brevibacterium sp. o2 chromosome, complete genome	2	473976-474202	2	CRISPRCasFinder	no		csa3,WYL,RT,DEDDh,DinG,cas4,cas3	Orphan	GCCTTCTTCGCGGCCTCAGCCTT	23	0	0	NA	NA	NA	4	4	Orphan	csa3,WYL,RT,DEDDh,DinG,cas4,cas3	NA,NA|183aa|down_4|NZ_CP050154.1_478919_479468_-,NA|76aa|down_9|NZ_CP050154.1_487473_487701_-	NA|315aa|up_9|NZ_CP050154.1_460739_461684_-	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional	NA|338aa|up_8|NZ_CP050154.1_461755_462769_+	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|128aa|up_7|NZ_CP050154.1_462800_463184_-	smart00422, HTH_MERR, helix_turn_helix, mercury resistance	NA|508aa|up_6|NZ_CP050154.1_463372_464896_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|621aa|up_5|NZ_CP050154.1_465222_467085_+	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|227aa|up_4|NZ_CP050154.1_467084_467765_+	cd00446, GrpE, nucleotide exchange factor GrpE	NA|338aa|up_3|NZ_CP050154.1_467945_468959_+	PRK14295, PRK14295, molecular chaperone DnaJ	NA|147aa|up_2|NZ_CP050154.1_468973_469414_+	cd04766, HTH_HspR, Helix-Turn-Helix DNA binding domain of the HspR transcription regulator	NA|292aa|up_1|NZ_CP050154.1_469573_470449_+	pfam06724, DUF1206, Domain of Unknown Function (DUF1206)	NA|452aa|up_0|NZ_CP050154.1_470561_471917_-	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain	NA|365aa|down_0|NZ_CP050154.1_474568_475663_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|427aa|down_1|NZ_CP050154.1_475765_477046_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|283aa|down_2|NZ_CP050154.1_477169_478018_+	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|273aa|down_3|NZ_CP050154.1_478080_478899_-	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|183aa|down_4|NZ_CP050154.1_478919_479468_-	NA	NA|335aa|down_5|NZ_CP050154.1_480093_481098_-	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase	NA|424aa|down_6|NZ_CP050154.1_481479_482751_-	PRK08639, PRK08639, threonine dehydratase; Validated	NA|868aa|down_7|NZ_CP050154.1_482947_485551_+	PRK14705, PRK14705, glycogen branching enzyme; Provisional	NA|480aa|down_8|NZ_CP050154.1_486055_487495_-	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|76aa|down_9|NZ_CP050154.1_487473_487701_-	NA
GCF_011617705.1_ASM1161770v1	NZ_CP050154	Brevibacterium sp. o2 chromosome, complete genome	3	631252-631339	3	CRISPRCasFinder	no		csa3,WYL,RT,DEDDh,DinG,cas4,cas3	Orphan	GCCGGAACGGCCGCCTCGGCGAGGG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,DEDDh,DinG,cas4,cas3	NA,NA	NA|621aa|up_9|NZ_CP050154.1_616907_618770_+	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain	NA|472aa|up_8|NZ_CP050154.1_618868_620284_+	cd06836, PLPDE_III_ODC_DapDC_like_1, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, Uncharacterized Proteins with similarity to Ornithine and Diaminopimelate Decarboxylases	NA|601aa|up_7|NZ_CP050154.1_620486_622289_+	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|331aa|up_6|NZ_CP050154.1_622586_623579_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|286aa|up_5|NZ_CP050154.1_623632_624490_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|552aa|up_4|NZ_CP050154.1_624489_626145_+	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|426aa|up_3|NZ_CP050154.1_626137_627415_+	cd07025, Peptidase_S66, LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein	NA|268aa|up_2|NZ_CP050154.1_627507_628311_+	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family	NA|103aa|up_1|NZ_CP050154.1_628453_628762_+	pfam12986, DUF3870, Domain of unknown function (DUF3870)	NA|386aa|up_0|NZ_CP050154.1_628898_630056_+	COG5505, COG5505, Predicted integral membrane protein [Function unknown]	NA|234aa|down_0|NZ_CP050154.1_631346_632048_+	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain	NA|453aa|down_1|NZ_CP050154.1_632225_633584_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|132aa|down_2|NZ_CP050154.1_633774_634170_+	pfam00582, Usp, Universal stress protein family	NA|362aa|down_3|NZ_CP050154.1_634356_635442_-	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]	NA|203aa|down_4|NZ_CP050154.1_635636_636245_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|785aa|down_5|NZ_CP050154.1_636539_638894_+	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|372aa|down_6|NZ_CP050154.1_638948_640064_+	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|363aa|down_7|NZ_CP050154.1_640334_641423_+	pfam00877, NLPC_P60, NlpC/P60 family	NA|1046aa|down_8|NZ_CP050154.1_641687_644825_-	cd09602, M1_APN, Peptidase M1 family including aminopeptidase N catalytic domain	NA|383aa|down_9|NZ_CP050154.1_644910_646059_+	COG4129, COG4129, Predicted membrane protein [Function unknown]
GCF_011617705.1_ASM1161770v1	NZ_CP050154	Brevibacterium sp. o2 chromosome, complete genome	4	2967523-2967688	1	PILER-CR	no		csa3,WYL,RT,DEDDh,DinG,cas4,cas3	Orphan	GACCCGACTCTGTGTCGTGTCTTGAA	26	0	0	NA	NA	NA	2	2	Orphan	csa3,WYL,RT,DEDDh,DinG,cas4,cas3	NA|109aa|up_9|NZ_CP050154.1_2956088_2956415_-,NA|104aa|up_5|NZ_CP050154.1_2963196_2963508_-,NA|254aa|up_4|NZ_CP050154.1_2963575_2964337_-,NA|146aa|up_3|NZ_CP050154.1_2964450_2964888_-,NA|201aa|up_2|NZ_CP050154.1_2964865_2965468_-,NA|116aa|up_1|NZ_CP050154.1_2965458_2965806_-,NA|126aa|down_0|NZ_CP050154.1_2968109_2968487_-,NA|84aa|down_2|NZ_CP050154.1_2969636_2969888_-,NA|280aa|down_3|NZ_CP050154.1_2970427_2971267_-,NA|391aa|down_7|NZ_CP050154.1_2973271_2974444_+	NA|109aa|up_9|NZ_CP050154.1_2956088_2956415_-	NA	NA|610aa|up_8|NZ_CP050154.1_2956807_2958637_-	pfam12696, TraG-D_C, TraM recognition site of TraD and TraG	NA|547aa|up_7|NZ_CP050154.1_2960370_2962011_-	pfam12666, PrgI, PrgI family protein	NA|383aa|up_6|NZ_CP050154.1_2962014_2963163_-	pfam04610, TrbL, TrbL/VirB6 plasmid conjugal transfer protein	NA|104aa|up_5|NZ_CP050154.1_2963196_2963508_-	NA	NA|254aa|up_4|NZ_CP050154.1_2963575_2964337_-	NA	NA|146aa|up_3|NZ_CP050154.1_2964450_2964888_-	NA	NA|201aa|up_2|NZ_CP050154.1_2964865_2965468_-	NA	NA|116aa|up_1|NZ_CP050154.1_2965458_2965806_-	NA	NA|290aa|up_0|NZ_CP050154.1_2965811_2966681_-	PRK12539, PRK12539, RNA polymerase sigma factor SigF	NA|126aa|down_0|NZ_CP050154.1_2968109_2968487_-	NA	NA|336aa|down_1|NZ_CP050154.1_2968527_2969535_-	pfam10935, DUF2637, Protein of unknown function (DUF2637)	NA|84aa|down_2|NZ_CP050154.1_2969636_2969888_-	NA	NA|280aa|down_3|NZ_CP050154.1_2970427_2971267_-	NA	NA|84aa|down_4|NZ_CP050154.1_2971275_2971527_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|112aa|down_5|NZ_CP050154.1_2971638_2971974_+	pfam08667, BetR, BetR domain	NA|267aa|down_6|NZ_CP050154.1_2972241_2973042_-	cd08562, GDPD_EcUgpQ_like, Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins	NA|391aa|down_7|NZ_CP050154.1_2973271_2974444_+	NA	NA|410aa|down_8|NZ_CP050154.1_2974484_2975714_+	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family	NA|182aa|down_9|NZ_CP050154.1_2975756_2976302_-	pfam09350, DUF1992, Domain of unknown function (DUF1992)
GCF_011617705.1_ASM1161770v1	NZ_CP050154	Brevibacterium sp. o2 chromosome, complete genome	5	3124051-3124198	2	PILER-CR	no		csa3,WYL,RT,DEDDh,DinG,cas4,cas3	Orphan	CCGGCTGACCGGGCTGTGCCGGTCCACCCGGCTGAC	36	0	0	NA	NA	NA	2	2	Orphan	csa3,WYL,RT,DEDDh,DinG,cas4,cas3	NA,NA|325aa|down_6|NZ_CP050154.1_3131429_3132404_-,NA|52aa|down_8|NZ_CP050154.1_3132949_3133105_-	NA|546aa|up_9|NZ_CP050154.1_3113121_3114759_-	COG2890, HemK, Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis]	NA|759aa|up_8|NZ_CP050154.1_3114808_3117085_+	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|106aa|up_7|NZ_CP050154.1_3117111_3117429_-	TIGR03816, tadE_like_DECH, helicase/secretion neighborhood TadE-like protein	NA|129aa|up_6|NZ_CP050154.1_3117425_3117812_-	pfam07811, TadE, TadE-like protein	NA|82aa|up_5|NZ_CP050154.1_3117818_3118064_-	pfam14029, DUF4244, Protein of unknown function (DUF4244)	NA|201aa|up_4|NZ_CP050154.1_3118242_3118845_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|197aa|up_3|NZ_CP050154.1_3118886_3119477_-	pfam00482, T2SSF, Type II secretion system (T2SS), protein F	NA|232aa|up_2|NZ_CP050154.1_3119479_3120175_-	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion]	NA|391aa|up_1|NZ_CP050154.1_3120171_3121344_-	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|336aa|up_0|NZ_CP050154.1_3121340_3122348_-	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|646aa|down_0|NZ_CP050154.1_3125478_3127416_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|136aa|down_1|NZ_CP050154.1_3127596_3128004_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|244aa|down_2|NZ_CP050154.1_3128098_3128830_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|259aa|down_3|NZ_CP050154.1_3128826_3129603_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|226aa|down_4|NZ_CP050154.1_3129852_3130530_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|256aa|down_5|NZ_CP050154.1_3130665_3131433_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|325aa|down_6|NZ_CP050154.1_3131429_3132404_-	NA	NA|158aa|down_7|NZ_CP050154.1_3132393_3132867_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|52aa|down_8|NZ_CP050154.1_3132949_3133105_-	NA	NA|787aa|down_9|NZ_CP050154.1_3133384_3135745_-	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]
GCF_011617705.1_ASM1161770v1	NZ_CP050154	Brevibacterium sp. o2 chromosome, complete genome	6	4204336-4204426	4	CRISPRCasFinder	no		csa3,WYL,RT,DEDDh,DinG,cas4,cas3	Orphan	GCCCCCACGACGAACCTGCCGCC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,DEDDh,DinG,cas4,cas3	NA,NA|55aa|down_5|NZ_CP050154.1_4211188_4211353_-	NA|145aa|up_9|NZ_CP050154.1_4190389_4190824_+	COG3795, COG3795, Uncharacterized protein conserved in bacteria [Function unknown]	NA|439aa|up_8|NZ_CP050154.1_4190834_4192151_+	COG4941, COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription]	NA|324aa|up_7|NZ_CP050154.1_4192235_4193207_+	TIGR00549, Mevalonate_kinase, mevalonate kinase	NA|339aa|up_6|NZ_CP050154.1_4193203_4194220_+	COG3407, MVD1, Mevalonate pyrophosphate decarboxylase [Lipid metabolism]	NA|364aa|up_5|NZ_CP050154.1_4194216_4195308_+	TIGR01220, phosphomevalonate_kinase, phosphomevalonate kinase, ERG8-type, Gram-positive branch	NA|381aa|up_4|NZ_CP050154.1_4195297_4196440_+	PRK05437, PRK05437, isopentenyl pyrophosphate isomerase; Provisional	NA|368aa|up_3|NZ_CP050154.1_4196436_4197540_+	cd00643, HMG-CoA_reductase_classI, Class I hydroxymethylglutaryl-coenzyme A (HMG-CoA) reductase (HMGR)	NA|289aa|up_2|NZ_CP050154.1_4200077_4200944_+	pfam12401, DUF3662, Protein of unknown function (DUF2662)	NA|170aa|up_1|NZ_CP050154.1_4200940_4201450_+	pfam00498, FHA, FHA domain	NA|475aa|up_0|NZ_CP050154.1_4201446_4202871_+	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|490aa|down_0|NZ_CP050154.1_4204507_4205977_+	TIGR03423, pbp2_mrdA, penicillin-binding protein 2	NA|609aa|down_1|NZ_CP050154.1_4205973_4207800_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|627aa|down_2|NZ_CP050154.1_4207918_4209799_+	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|171aa|down_3|NZ_CP050154.1_4209873_4210386_-	COG4978, COG4978, Transcriptional regulator, effector-binding domain/component [Transcription / Signal transduction mechanisms]	NA|215aa|down_4|NZ_CP050154.1_4210544_4211189_-	PRK05670, PRK05670, anthranilate synthase component II; Provisional	NA|55aa|down_5|NZ_CP050154.1_4211188_4211353_-	NA	NA|366aa|down_6|NZ_CP050154.1_4211354_4212452_-	cd05830, Sortase_E, Sortase domain found in the class E family of sortases	NA|241aa|down_7|NZ_CP050154.1_4212846_4213569_+	pfam06781, CrgA, Cell division protein CrgA	NA|232aa|down_8|NZ_CP050154.1_4213953_4214649_-	pfam01694, Rhomboid, Rhomboid family	NA|181aa|down_9|NZ_CP050154.1_4214687_4215230_-	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]
