assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011691525.1_ASM1169152v1	NZ_CP050173	Escherichia coli strain STB20-1 chromosome, complete genome	1	1026207-1026601	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACC	28,29,28	0	0	NA	NA	I-E:I-E:I-E	6,6,6	6	Orphan	cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	NA|47aa|up_1|NZ_CP050173.1_1024916_1025057_-,NA	NA|434aa|up_9|NZ_CP050173.1_1015613_1016915_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP050173.1_1016962_1019197_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP050173.1_1019274_1019523_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP050173.1_1019522_1019858_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP050173.1_1019928_1020720_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP050173.1_1020947_1022585_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP050173.1_1022672_1023971_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP050173.1_1024030_1024903_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP050173.1_1024916_1025057_-	NA	NA|224aa|up_0|NZ_CP050173.1_1025195_1025867_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP050173.1_1027239_1028718_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP050173.1_1028744_1030022_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP050173.1_1030340_1031126_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP050173.1_1031195_1032650_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP050173.1_1032671_1034081_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP050173.1_1034058_1034838_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|298aa|down_6|NZ_CP050173.1_1034801_1035695_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP050173.1_1035842_1036418_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP050173.1_1036434_1036695_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP050173.1_1036685_1037957_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_011691525.1_ASM1169152v1	NZ_CP050173	Escherichia coli strain STB20-1 chromosome, complete genome	2	1047362-1048121	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas2	cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	12,12,12	12	Unclear	cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	NA,NA	NA|192aa|up_9|NZ_CP050173.1_1035842_1036418_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|up_8|NZ_CP050173.1_1036434_1036695_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|up_7|NZ_CP050173.1_1036685_1037957_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|121aa|up_6|NZ_CP050173.1_1038034_1038397_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_5|NZ_CP050173.1_1038715_1040515_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_4|NZ_CP050173.1_1040514_1042227_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_3|NZ_CP050173.1_1042300_1043035_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_2|NZ_CP050173.1_1043299_1043452_+	pfam01848, HOK_GEF, Hok/gef family	NA|371aa|up_1|NZ_CP050173.1_1043644_1044757_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	cas2|78aa|up_0|NZ_CP050173.1_1047031_1047265_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP050173.1_1048203_1049241_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP050173.1_1049492_1050401_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP050173.1_1050402_1051830_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP050173.1_1051829_1052435_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP050173.1_1052484_1052808_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP050173.1_1053001_1053313_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP050173.1_1053331_1054042_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP050173.1_1054041_1054521_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP050173.1_1054517_1055567_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP050173.1_1055547_1056309_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_011691525.1_ASM1169152v1	NZ_CP050173	Escherichia coli strain STB20-1 chromosome, complete genome	3	1588475-1588592	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	NA,NA	NA|62aa|up_9|NZ_CP050173.1_1577760_1577946_-	PRK09956, PRK09956, ISNCY family transposase	NA|300aa|up_8|NZ_CP050173.1_1577958_1578858_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_7|NZ_CP050173.1_1579050_1580241_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_6|NZ_CP050173.1_1580237_1581497_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_5|NZ_CP050173.1_1581486_1583115_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_4|NZ_CP050173.1_1583387_1584746_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_3|NZ_CP050173.1_1584750_1585827_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|217aa|up_2|NZ_CP050173.1_1586289_1586940_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP050173.1_1586993_1587248_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP050173.1_1587247_1588378_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP050173.1_1588611_1590897_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP050173.1_1591592_1595345_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP050173.1_1595472_1596195_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP050173.1_1596341_1598969_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP050173.1_1599117_1600806_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP050173.1_1600802_1601426_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|550aa|down_6|NZ_CP050173.1_1603937_1605587_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_7|NZ_CP050173.1_1605591_1606368_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_8|NZ_CP050173.1_1606441_1607626_-	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|441aa|down_9|NZ_CP050173.1_1607656_1608979_-	pfam02667, SCFA_trans, Short chain fatty acid transporter
GCF_011691525.1_ASM1169152v1	NZ_CP050173	Escherichia coli strain STB20-1 chromosome, complete genome	4	1859810-1859898	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	Unclear	GGTTGTCCAACGGTTGTCCAACG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	NA|122aa|up_7|NZ_CP050173.1_1856081_1856447_-,NA|84aa|up_6|NZ_CP050173.1_1856506_1856758_-,NA|102aa|up_5|NZ_CP050173.1_1856766_1857072_-,NA|123aa|up_4|NZ_CP050173.1_1857439_1857808_-,NA|54aa|up_0|NZ_CP050173.1_1859277_1859439_+,NA	NA|44aa|up_9|NZ_CP050173.1_1854768_1854900_-	pfam02061, Lambda_CIII, Lambda Phage CIII	NA|323aa|up_8|NZ_CP050173.1_1854924_1855893_-	PTZ00121, PTZ00121, MAEBL; Provisional	NA|122aa|up_7|NZ_CP050173.1_1856081_1856447_-	NA	NA|84aa|up_6|NZ_CP050173.1_1856506_1856758_-	NA	NA|102aa|up_5|NZ_CP050173.1_1856766_1857072_-	NA	NA|123aa|up_4|NZ_CP050173.1_1857439_1857808_-	NA	NA|239aa|up_3|NZ_CP050173.1_1857825_1858542_-	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|65aa|up_2|NZ_CP050173.1_1858648_1858843_+	pfam09048, Cro, Cro	NA|98aa|up_1|NZ_CP050173.1_1858951_1859245_+	pfam05269, Phage_CII, Bacteriophage CII protein	NA|54aa|up_0|NZ_CP050173.1_1859277_1859439_+	NA	NA|822aa|down_0|NZ_CP050173.1_1860305_1862771_+	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily	NA|147aa|down_1|NZ_CP050173.1_1862847_1863288_+	pfam05772, NinB, NinB protein	NA|58aa|down_2|NZ_CP050173.1_1863284_1863458_+	pfam17466, NinD, Family of unknown function	NA|59aa|down_3|NZ_CP050173.1_1863424_1863601_+	pfam05322, NinE, NINE Protein	NA|120aa|down_4|NZ_CP050173.1_1863603_1863963_+	pfam10765, DUF2591, Protein of unknown function (DUF2591)	NA|59aa|down_5|NZ_CP050173.1_1863955_1864132_+	pfam05810, NinF, NinF protein	NA|69aa|down_6|NZ_CP050173.1_1864731_1864938_+	pfam06322, Phage_NinH, Phage NinH protein	NA|224aa|down_7|NZ_CP050173.1_1864915_1865587_+	cd07424, MPP_PrpA_PrpB, PrpA and PrpB, metallophosphatase domain	NA|173aa|down_8|NZ_CP050173.1_1865577_1866096_+	pfam06530, Phage_antitermQ, Phage antitermination protein Q	NA|108aa|down_9|NZ_CP050173.1_1866693_1867017_+	TIGR01594, Uncharacterized_protein_HI_1416, phage holin, lambda family
GCF_011691525.1_ASM1169152v1	NZ_CP050173	Escherichia coli strain STB20-1 chromosome, complete genome	5	2230865-2230988	5	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	NA,NA|30aa|down_7|NZ_CP050173.1_2239884_2239974_+	NA|471aa|up_9|NZ_CP050173.1_2220319_2221732_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP050173.1_2222288_2222498_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP050173.1_2222952_2223579_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP050173.1_2223599_2225702_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP050173.1_2225714_2226353_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP050173.1_2226416_2227085_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP050173.1_2227081_2227867_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP050173.1_2227870_2228683_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP050173.1_2228694_2230299_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP050173.1_2230424_2230730_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP050173.1_2231302_2232559_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP050173.1_2232599_2233973_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP050173.1_2234187_2234829_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP050173.1_2234868_2236017_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP050173.1_2236307_2237519_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP050173.1_2237631_2238564_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP050173.1_2238560_2239586_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP050173.1_2239884_2239974_+	NA	NA|390aa|down_8|NZ_CP050173.1_2240139_2241309_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP050173.1_2241543_2242125_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_011691525.1_ASM1169152v1	NZ_CP050173	Escherichia coli strain STB20-1 chromosome, complete genome	6	2870016-2870107	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	NA|61aa|up_9|NZ_CP050173.1_2859094_2859277_-,NA	NA|61aa|up_9|NZ_CP050173.1_2859094_2859277_-	NA	NA|1321aa|up_8|NZ_CP050173.1_2859355_2863318_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP050173.1_2863357_2863996_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP050173.1_2864283_2865375_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP050173.1_2865374_2866067_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP050173.1_2866078_2866465_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP050173.1_2866472_2867273_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP050173.1_2867282_2867873_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP050173.1_2867883_2868378_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP050173.1_2868398_2869727_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP050173.1_2870530_2871127_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP050173.1_2871147_2871375_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP050173.1_2871412_2872654_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP050173.1_2872946_2874203_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP050173.1_2874463_2875384_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP050173.1_2875383_2875689_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP050173.1_2875840_2876440_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP050173.1_2876436_2878983_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP050173.1_2878982_2880155_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP050173.1_2880284_2880977_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_011691525.1_ASM1169152v1	NZ_CP050173	Escherichia coli strain STB20-1 chromosome, complete genome	7	3132308-3132452	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	NA,NA	NA|330aa|up_9|NZ_CP050173.1_3120206_3121196_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP050173.1_3121592_3122501_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP050173.1_3122692_3124714_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP050173.1_3125292_3125970_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP050173.1_3125962_3126718_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP050173.1_3126704_3127859_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP050173.1_3127855_3128896_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP050173.1_3128982_3130272_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP050173.1_3130330_3130807_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP050173.1_3130958_3132242_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP050173.1_3132475_3134737_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP050173.1_3134919_3136353_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP050173.1_3136428_3137481_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP050173.1_3137664_3138618_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP050173.1_3138658_3139654_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP050173.1_3139808_3140627_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP050173.1_3140627_3141686_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP050173.1_3141688_3142378_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP050173.1_3142377_3143151_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP050173.1_3143317_3143467_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_011691525.1_ASM1169152v1	NZ_CP050173	Escherichia coli strain STB20-1 chromosome, complete genome	8	3353367-3353463	8	CRISPRCasFinder	no		cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	NA,NA	NA|231aa|up_9|NZ_CP050173.1_3345162_3345855_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP050173.1_3346074_3346617_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP050173.1_3347087_3347954_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP050173.1_3347955_3348168_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP050173.1_3348275_3348797_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP050173.1_3348832_3350218_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP050173.1_3350391_3350886_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP050173.1_3350888_3351611_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP050173.1_3351728_3352238_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP050173.1_3352234_3353302_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP050173.1_3353496_3354390_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP050173.1_3354386_3355202_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|407aa|down_2|NZ_CP050173.1_3355251_3356472_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP050173.1_3356481_3358149_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NZ_CP050173.1_3358465_3359515_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NZ_CP050173.1_3359536_3360772_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|NZ_CP050173.1_3360782_3361568_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_7|NZ_CP050173.1_3361795_3362941_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|NZ_CP050173.1_3362962_3364264_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|NZ_CP050173.1_3364320_3365682_-	PRK08044, PRK08044, allantoinase AllB
GCF_011691525.1_ASM1169152v1	NZ_CP050173	Escherichia coli strain STB20-1 chromosome, complete genome	9	3891621-3891755	9	CRISPRCasFinder	no		cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	Orphan	GGCCTACACGCTGCGATTTTGTAGGCCGGATAAGCAAAGCGCATCCGGCA	50	1	1	3891671-3891705	NZ_CP050173.1_3954848-3954814	NA	1	1	Orphan	cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	NA,NA|53aa|down_4|NZ_CP050173.1_3899039_3899198_-	NA|393aa|up_9|NZ_CP050173.1_3879604_3880783_-	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter	NA|44aa|up_8|NZ_CP050173.1_3880884_3881016_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|552aa|up_7|NZ_CP050173.1_3881104_3882760_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|328aa|up_6|NZ_CP050173.1_3882923_3883907_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|NZ_CP050173.1_3883882_3885493_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|NZ_CP050173.1_3885476_3886175_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|NZ_CP050173.1_3886288_3887053_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|NZ_CP050173.1_3887138_3888017_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|NZ_CP050173.1_3888355_3890056_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|NZ_CP050173.1_3890066_3891569_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|NZ_CP050173.1_3891768_3892464_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|NZ_CP050173.1_3892538_3894890_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|NZ_CP050173.1_3895054_3897961_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|NZ_CP050173.1_3897972_3898632_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|53aa|down_4|NZ_CP050173.1_3899039_3899198_-	NA	NA|272aa|down_5|NZ_CP050173.1_3900155_3900971_-	PRK09430, djlA, co-chaperone DjlA	NA|785aa|down_6|NZ_CP050173.1_3901225_3903580_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_7|NZ_CP050173.1_3903632_3904919_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_8|NZ_CP050173.1_3904918_3905908_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_9|NZ_CP050173.1_3905904_3906726_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
GCF_011691525.1_ASM1169152v1	NZ_CP050173	Escherichia coli strain STB20-1 chromosome, complete genome	10	3923595-3923736	10	CRISPRCasFinder	no		cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	Orphan	GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	NA,NA	NA|96aa|up_9|NZ_CP050173.1_3912586_3912874_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_8|NZ_CP050173.1_3912870_3914157_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_7|NZ_CP050173.1_3914207_3915149_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_6|NZ_CP050173.1_3915163_3915934_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|up_5|NZ_CP050173.1_3916406_3917921_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|up_4|NZ_CP050173.1_3917951_3919094_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|up_3|NZ_CP050173.1_3919222_3920440_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|up_2|NZ_CP050173.1_3920513_3922067_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|up_1|NZ_CP050173.1_3922175_3922961_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|up_0|NZ_CP050173.1_3922966_3923557_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_0|NZ_CP050173.1_3923765_3924161_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_1|NZ_CP050173.1_3924422_3927644_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_2|NZ_CP050173.1_3927661_3928810_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_3|NZ_CP050173.1_3929265_3930087_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_4|NZ_CP050173.1_3930253_3931168_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|317aa|down_5|NZ_CP050173.1_3931233_3932184_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|150aa|down_6|NZ_CP050173.1_3932185_3932635_-	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional	NA|165aa|down_7|NZ_CP050173.1_3932759_3933254_-	PRK00376, lspA, lipoprotein signal peptidase	NA|939aa|down_8|NZ_CP050173.1_3933253_3936070_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	NA|314aa|down_9|NZ_CP050173.1_3936112_3937054_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase
GCF_011691525.1_ASM1169152v1	NZ_CP050174	Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence	1	58624-58743	1	CRISPRCasFinder	no			Orphan	TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,WYL,cas2,DEDDh,DinG,c2c9_V-U4,Cas14u_CAS-V	NA|145aa|up_7|NZ_CP050174.1_52831_53266_-,NA|28aa|up_6|NZ_CP050174.1_53246_53330_+,NA|54aa|up_3|NZ_CP050174.1_55389_55551_+,NA|326aa|up_2|NZ_CP050174.1_55575_56553_+,NA|119aa|up_1|NZ_CP050174.1_56549_56906_-,NA|86aa|down_2|NZ_CP050174.1_61047_61305_+	NA|235aa|up_9|NZ_CP050174.1_49367_50072_-	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|479aa|up_8|NZ_CP050174.1_50338_51775_+	pfam03917, GSH_synth_ATP, Eukaryotic glutathione synthase, ATP binding domain	NA|145aa|up_7|NZ_CP050174.1_52831_53266_-	NA	NA|28aa|up_6|NZ_CP050174.1_53246_53330_+	NA	NA|215aa|up_5|NZ_CP050174.1_53484_54129_-	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme	NA|218aa|up_4|NZ_CP050174.1_54517_55171_+	PHA02518, PHA02518, ParA-like protein; Provisional	NA|54aa|up_3|NZ_CP050174.1_55389_55551_+	NA	NA|326aa|up_2|NZ_CP050174.1_55575_56553_+	NA	NA|119aa|up_1|NZ_CP050174.1_56549_56906_-	NA	NA|279aa|up_0|NZ_CP050174.1_57532_58369_-	pfam01051, Rep_3, Initiator Replication protein	NA|84aa|down_0|NZ_CP050174.1_59607_59859_+	PRK02854, PRK02854, primosomal protein DnaT	NA|94aa|down_1|NZ_CP050174.1_59848_60130_+	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|86aa|down_2|NZ_CP050174.1_61047_61305_+	NA	NA|323aa|down_3|NZ_CP050174.1_61341_62310_-	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|66aa|down_4|NZ_CP050174.1_62652_62850_-	pfam11666, DUF2933, Protein of unknown function (DUF2933)	NA|826aa|down_5|NZ_CP050174.1_62890_65368_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|147aa|down_6|NZ_CP050174.1_65465_65906_-	COG3019, COG3019, Predicted metal-binding protein [General function prediction only]	NA|1049aa|down_7|NZ_CP050174.1_65992_69139_-	TIGR00914, Nickel-cobalt-cadmium_resistance_protein_NccA, heavy metal efflux pump, CzcA family	NA|431aa|down_8|NZ_CP050174.1_69149_70442_-	PRK09783, PRK09783, copper/silver efflux system membrane fusion protein CusB; Provisional	NA|118aa|down_9|NZ_CP050174.1_70556_70910_-	PRK09838, PRK09838, periplasmic copper-binding protein; Provisional
