assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_011764625.1_ASM1176462v1	NZ_AP022869	Halomonas meridiana strain Eplume2	1	763150-763233	1	CRISPRCasFinder	no		WYL,RT,DEDDh,csa3,DinG,cas14j,Cas9_archaeal,cas3,PD-DExK,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,PrimPol	Orphan	ACGAGACAAGCTAAAAGGTTTTAGCTTT	28	0	0	NA	NA	NA	1	1	Orphan	WYL,RT,DEDDh,csa3,DinG,cas14j,Cas9_archaeal,cas3,PD-DExK,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,PrimPol	NA,NA	NA|327aa|up_9|NZ_AP022869.1_750746_751727_+	PRK09512, rbsC, ribose ABC transporter permease protein; Reviewed	NA|514aa|up_8|NZ_AP022869.1_751782_753324_+	cd07804, FGGY_XK_like_1, uncharacterized xylulose kinase-like proteins; a subgroup of the FGGY family of carbohydrate kinases	NA|244aa|up_7|NZ_AP022869.1_753332_754064_+	PRK07060, PRK07060, short chain dehydrogenase; Provisional	NA|493aa|up_6|NZ_AP022869.1_754094_755573_+	cd07809, FGGY_D-XK_1, D-xylulose kinases, subgroup 1; members of the FGGY family of carbohydrate kinases	NA|318aa|up_5|NZ_AP022869.1_755624_756578_+	PRK05269, PRK05269, transaldolase B; Provisional	NA|670aa|up_4|NZ_AP022869.1_756634_758644_+	PRK12753, PRK12753, transketolase; Reviewed	NA|333aa|up_3|NZ_AP022869.1_758657_759656_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|315aa|up_2|NZ_AP022869.1_759856_760801_+	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|211aa|up_1|NZ_AP022869.1_761425_762058_-	PRK09270, PRK09270, nucleoside triphosphate hydrolase domain-containing protein; Reviewed	NA|355aa|up_0|NZ_AP022869.1_762035_763100_-	cd06274, PBP1_FruR, ligand binding domain of DNA transcription repressor specific for fructose (FruR) and its close homologs	NA|336aa|down_0|NZ_AP022869.1_763360_764368_+	cd20002, PBP1_LsrB_Quorum_Sensing-like, ligand-binding protein LsrB-like of ABC transporter periplasmic binding protein	NA|507aa|down_1|NZ_AP022869.1_764409_765930_+	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|340aa|down_2|NZ_AP022869.1_765922_766942_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|317aa|down_3|NZ_AP022869.1_767016_767967_+	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|285aa|down_4|NZ_AP022869.1_768070_768925_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|347aa|down_5|NZ_AP022869.1_769059_770100_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|426aa|down_6|NZ_AP022869.1_770145_771423_-	pfam08013, Tagatose_6_P_K, Tagatose 6 phosphate kinase	NA|317aa|down_7|NZ_AP022869.1_771419_772370_-	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)	NA|504aa|down_8|NZ_AP022869.1_773340_774852_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|297aa|down_9|NZ_AP022869.1_774921_775812_-	cd06322, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of uncharacterized ABC-type transport systems
GCF_011764625.1_ASM1176462v1	NZ_AP022869	Halomonas meridiana strain Eplume2	2	2585942-2586081	2	CRISPRCasFinder	no		WYL,RT,DEDDh,csa3,DinG,cas14j,Cas9_archaeal,cas3,PD-DExK,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,PrimPol	Orphan	GTTATCCACGTCACTAGCGCCACGC	25	0	0	NA	NA	NA	2	2	Orphan	WYL,RT,DEDDh,csa3,DinG,cas14j,Cas9_archaeal,cas3,PD-DExK,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,PrimPol	NA|295aa|up_9|NZ_AP022869.1_2573244_2574129_-,NA|96aa|up_7|NZ_AP022869.1_2577767_2578055_+,NA|58aa|up_6|NZ_AP022869.1_2578563_2578737_+,NA|208aa|up_5|NZ_AP022869.1_2578739_2579363_+,NA	NA|295aa|up_9|NZ_AP022869.1_2573244_2574129_-	NA	NA|1138aa|up_8|NZ_AP022869.1_2574342_2577756_+	pfam07916, TraG_N, TraG-like protein, N-terminal region	NA|96aa|up_7|NZ_AP022869.1_2577767_2578055_+	NA	NA|58aa|up_6|NZ_AP022869.1_2578563_2578737_+	NA	NA|208aa|up_5|NZ_AP022869.1_2578739_2579363_+	NA	NA|196aa|up_4|NZ_AP022869.1_2579359_2579947_+	pfam05280, FlhC, Flagellar transcriptional activator (FlhC)	NA|454aa|up_3|NZ_AP022869.1_2580249_2581611_-	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|944aa|up_2|NZ_AP022869.1_2581776_2584608_+	PRK14876, PRK14876, conjugal transfer mating pair stabilization protein TraN; Provisional	NA|74aa|up_1|NZ_AP022869.1_2584723_2584945_+	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|279aa|up_0|NZ_AP022869.1_2584944_2585781_+	pfam04796, RepA_C, Plasmid encoded RepA protein	NA|115aa|down_0|NZ_AP022869.1_2586400_2586745_+	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family	NA|407aa|down_1|NZ_AP022869.1_2586734_2587955_-	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain	NA|457aa|down_2|NZ_AP022869.1_2588158_2589529_-	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA|561aa|down_3|NZ_AP022869.1_2589650_2591333_-	PRK01318, PRK01318, membrane protein insertase; Provisional	NA|134aa|down_4|NZ_AP022869.1_2591448_2591850_-	PRK00396, rnpA, ribonuclease P protein component	NA|45aa|down_5|NZ_AP022869.1_2591863_2591998_-	pfam00468, Ribosomal_L34, Ribosomal protein L34	NA|490aa|down_6|NZ_AP022869.1_2592532_2594002_+	TIGR00362, DnaA, chromosomal replication initiator protein DnaA	NA|368aa|down_7|NZ_AP022869.1_2594060_2595164_+	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated	NA|368aa|down_8|NZ_AP022869.1_2595271_2596375_+	PRK00064, recF, recombination protein F; Reviewed	NA|807aa|down_9|NZ_AP022869.1_2596414_2598835_+	PRK14939, gyrB, DNA gyrase subunit B; Provisional
GCF_011764625.1_ASM1176462v1	NZ_AP022869	Halomonas meridiana strain Eplume2	3	2832747-2834578	3,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	WYL,RT,DEDDh,csa3,DinG,cas14j,Cas9_archaeal,cas3,PD-DExK,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,PrimPol	Type I-F	GTTAGCTGCCGCCCAGGCAGCTCAGAAA,GTTAGCTGCCGCCCAGGCAGCTCAGAAA,GTTAGCTGCCGCCCAGGCAGCTCAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	30,30,16	30	TypeI-F	WYL,RT,DEDDh,csa3,DinG,cas14j,Cas9_archaeal,cas3,PD-DExK,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,PrimPol	NA|50aa|up_9|NZ_AP022869.1_2822334_2822484_-,NA|223aa|up_8|NZ_AP022869.1_2822685_2823354_-,NA|84aa|up_4|NZ_AP022869.1_2828165_2828417_-,NA|111aa|down_0|NZ_AP022869.1_2834663_2834996_-,NA|98aa|down_1|NZ_AP022869.1_2835010_2835304_-,NA|75aa|down_6|NZ_AP022869.1_2840717_2840942_-,NA|56aa|down_7|NZ_AP022869.1_2840946_2841114_-	NA|50aa|up_9|NZ_AP022869.1_2822334_2822484_-	NA	NA|223aa|up_8|NZ_AP022869.1_2822685_2823354_-	NA	cas1|325aa|up_7|NZ_AP022869.1_2823506_2824481_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1114aa|up_6|NZ_AP022869.1_2824477_2827819_+	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	NA|110aa|up_5|NZ_AP022869.1_2827819_2828149_-	pfam05534, HicB, HicB family	NA|84aa|up_4|NZ_AP022869.1_2828165_2828417_-	NA	cas8f|458aa|up_3|NZ_AP022869.1_2828665_2830039_+	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas5f|323aa|up_2|NZ_AP022869.1_2830031_2831000_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|343aa|up_1|NZ_AP022869.1_2831015_2832044_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|190aa|up_0|NZ_AP022869.1_2832047_2832617_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	NA|111aa|down_0|NZ_AP022869.1_2834663_2834996_-	NA	NA|98aa|down_1|NZ_AP022869.1_2835010_2835304_-	NA	NA|469aa|down_2|NZ_AP022869.1_2835969_2837376_+	PRK09469, glnA, glutamate--ammonia ligase	NA|178aa|down_3|NZ_AP022869.1_2837495_2838029_+	pfam13511, DUF4124, Domain of unknown function (DUF4124)	NA|353aa|down_4|NZ_AP022869.1_2838235_2839294_+	COG3852, NtrB, Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms]	NA|477aa|down_5|NZ_AP022869.1_2839290_2840721_+	TIGR01818, Nitrogen_assimilation_regulatory_protein, nitrogen regulation protein NR(I)	NA|75aa|down_6|NZ_AP022869.1_2840717_2840942_-	NA	NA|56aa|down_7|NZ_AP022869.1_2840946_2841114_-	NA	NA|176aa|down_8|NZ_AP022869.1_2841210_2841738_-	COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|44aa|down_9|NZ_AP022869.1_2841744_2841876_-	COG5510, COG5510, Predicted small secreted protein [Function unknown]
