assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	1	208448-208547	1	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	CTTACAGACCCAACTTCTTGTGCAG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA,NA|123aa|down_3|NZ_CP050994.1_215165_215534_-,NA|109aa|down_9|NZ_CP050994.1_224832_225159_-	NA|615aa|up_9|NZ_CP050994.1_195420_197265_-	PRK10949, PRK10949, signal peptide peptidase SppA	NA|676aa|up_8|NZ_CP050994.1_197690_199718_+	cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain	NA|183aa|up_7|NZ_CP050994.1_199861_200410_+	PRK10828, PRK10828, putative oxidoreductase; Provisional	NA|190aa|up_6|NZ_CP050994.1_200818_201388_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|293aa|up_5|NZ_CP050994.1_201644_202523_-	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	NA|339aa|up_4|NZ_CP050994.1_203042_204059_-	cd08252, AL_MDR, Arginate lyase and other MDR family members	NA|291aa|up_3|NZ_CP050994.1_204159_205032_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|475aa|up_2|NZ_CP050994.1_205032_206457_-	TIGR01998, N-acetylglucosamine_and_glucose_PTS, PTS system, N-acetylglucosamine-specific IIBC component	NA|486aa|up_1|NZ_CP050994.1_206545_208003_-	PRK09442, panF, sodium/pantothenate symporter	NA|83aa|up_0|NZ_CP050994.1_208086_208335_-	pfam06196, DUF997, Protein of unknown function (DUF997)	NA|154aa|down_0|NZ_CP050994.1_209879_210341_-	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|150aa|down_1|NZ_CP050994.1_210377_210827_-	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase	NA|649aa|down_2|NZ_CP050994.1_211111_213058_-	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|123aa|down_3|NZ_CP050994.1_215165_215534_-	NA	NA|223aa|down_4|NZ_CP050994.1_215541_216210_-	PRK04976, torD, chaperone protein TorD; Validated	NA|831aa|down_5|NZ_CP050994.1_216309_218802_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|388aa|down_6|NZ_CP050994.1_218829_219993_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|238aa|down_7|NZ_CP050994.1_220144_220858_+	PRK10766, PRK10766, two-component system response regulator TorR	NA|944aa|down_8|NZ_CP050994.1_221997_224829_+	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|109aa|down_9|NZ_CP050994.1_224832_225159_-	NA
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	2	273880-273988	2	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	GTCACTTGCCTGCGACATTCAAGCCACCGAAACG	34	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA,NA|131aa|down_7|NZ_CP050994.1_283872_284265_+	NA|320aa|up_9|NZ_CP050994.1_264218_265178_+	PRK05033, truB, tRNA pseudouridine synthase B; Provisional	NA|90aa|up_8|NZ_CP050994.1_265337_265607_+	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|714aa|up_7|NZ_CP050994.1_265787_267929_+	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|406aa|up_6|NZ_CP050994.1_268080_269298_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|118aa|up_5|NZ_CP050994.1_269301_269655_-	COG1553, DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]	NA|131aa|up_4|NZ_CP050994.1_269814_270207_+	pfam06476, DUF1090, Protein of unknown function (DUF1090)	NA|83aa|up_3|NZ_CP050994.1_270293_270542_-	PRK07118, PRK07118, Fe-S cluster domain-containing protein	NA|454aa|up_2|NZ_CP050994.1_270543_271905_-	PRK15452, PRK15452, putative protease; Provisional	NA|309aa|up_1|NZ_CP050994.1_272360_273287_+	PRK10190, PRK10190, L,D-transpeptidase; Provisional	NA|126aa|up_0|NZ_CP050994.1_273353_273731_-	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains	NA|467aa|down_0|NZ_CP050994.1_275295_276696_-	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only]	NA|173aa|down_1|NZ_CP050994.1_276990_277509_-	PRK12359, PRK12359, flavodoxin FldB; Provisional	NA|304aa|down_2|NZ_CP050994.1_277707_278619_+	PRK00283, xerD, tyrosine recombinase	NA|239aa|down_3|NZ_CP050994.1_279360_280077_+	PRK10877, PRK10877, protein disulfide isomerase II DsbC; Provisional	NA|577aa|down_4|NZ_CP050994.1_280042_281773_+	PRK11070, PRK11070, single-stranded-DNA-specific exonuclease RecJ	NA|394aa|down_5|NZ_CP050994.1_281928_283110_+	cd04789, HTH_Cfa, Helix-Turn-Helix DNA binding domain of the Cfa transcription regulator	NA|168aa|down_6|NZ_CP050994.1_283151_283655_+	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|131aa|down_7|NZ_CP050994.1_283872_284265_+	NA	NA|200aa|down_8|NZ_CP050994.1_284442_285042_+	PRK02830, PRK02830, Na(+)-translocating NADH-quinone reductase subunit E; Provisional	NA|169aa|down_9|NZ_CP050994.1_285090_285597_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	3	304352-304518	3	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	TCGTCGTCGAGGTAGGGATCCGCAAAGCCGAGCTCCTGCATGATGTCGCGCTCGA	55	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA,NA|75aa|down_5|NZ_CP050994.1_310562_310787_+	NA|643aa|up_9|NZ_CP050994.1_292727_294656_-	TIGR03423, pbp2_mrdA, penicillin-binding protein 2	NA|156aa|up_8|NZ_CP050994.1_294757_295225_-	TIGR00246, Ribosomal_RNA_large_subunit_methyltransferase_H, rRNA large subunit m3Psi methyltransferase RlmH	NA|112aa|up_7|NZ_CP050994.1_295231_295567_-	TIGR00090, rsfS_iojap_ybeB, ribosome silencing factor RsfS/YbeB/iojap	NA|218aa|up_6|NZ_CP050994.1_295780_296434_-	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase	NA|345aa|up_5|NZ_CP050994.1_296498_297533_-	PRK05574, holA, DNA polymerase III subunit delta; Reviewed	NA|161aa|up_4|NZ_CP050994.1_297668_298151_-	COG2980, RlpB, Rare lipoprotein B [Cell envelope biogenesis, outer membrane]	NA|859aa|up_3|NZ_CP050994.1_298270_300847_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|161aa|up_2|NZ_CP050994.1_301081_301564_+	PRK11032, PRK11032, zinc ribbon-containing protein	NA|510aa|up_1|NZ_CP050994.1_301629_303159_-	PRK00302, lnt, apolipoprotein N-acyltransferase; Reviewed	NA|294aa|up_0|NZ_CP050994.1_303357_304239_-	COG4535, CorC, Putative Mg2+ and Co2+ transporter CorC [Inorganic ion transport and metabolism]	NA|353aa|down_0|NZ_CP050994.1_304917_305976_-	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]	NA|478aa|down_1|NZ_CP050994.1_306025_307459_-	PRK14325, PRK14325, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional	NA|388aa|down_2|NZ_CP050994.1_307684_308848_+	PRK08849, PRK08849, 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional	NA|193aa|down_3|NZ_CP050994.1_308881_309460_+	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|297aa|down_4|NZ_CP050994.1_309558_310449_-	cd08414, PBP2_LTTR_aromatics_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in the catabolism of aromatic compounds and that of other related regulators, contains type 2 periplasmic binding fold	NA|75aa|down_5|NZ_CP050994.1_310562_310787_+	NA	NA|240aa|down_6|NZ_CP050994.1_310783_311503_+	cd07527, HAD_ScGPP-like, subfamily of beta-phosphoglucomutase-like family, similar to Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p)	NA|201aa|down_7|NZ_CP050994.1_311495_312098_-	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|516aa|down_8|NZ_CP050994.1_312379_313927_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|165aa|down_9|NZ_CP050994.1_314171_314666_+	pfam05818, TraT, Enterobacterial TraT complement resistance protein
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	4	623439-623597	4	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	GTCACCATTACCTGTCTGAGCGTGATGATGTCGGTGGACTTCCAGCCGGA	50	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA,NA|299aa|down_9|NZ_CP050994.1_632191_633088_-	NA|346aa|up_9|NZ_CP050994.1_612466_613504_-	PRK10461, PRK10461, thiamine biosynthesis lipoprotein ApbE; Provisional	NA|147aa|up_8|NZ_CP050994.1_613805_614246_+	cd13922, Azurin, Azurin is a redox partner for enzymes such as nitrite reductase or arsenite oxidase	NA|323aa|up_7|NZ_CP050994.1_615123_616092_+	cd02650, nuc_hydro_CaPnhB, NH_hydro_CaPnhB: A subgroup of nucleoside hydrolases similar to Corynebacterium ammoniagenes Purine/pyrimidine nucleoside hydrolase (pnhB)	NA|110aa|up_6|NZ_CP050994.1_616184_616514_+	pfam12321, DUF3634, Protein of unknown function (DUF3634)	NA|303aa|up_5|NZ_CP050994.1_616604_617513_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|148aa|up_4|NZ_CP050994.1_617631_618075_+	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|373aa|up_3|NZ_CP050994.1_618574_619693_+	PRK10525, PRK10525, cytochrome o ubiquinol oxidase subunit II; Provisional	NA|659aa|up_2|NZ_CP050994.1_619696_621673_+	TIGR02843, Cytochrome_bo3_ubiquinol_oxidase_subunit_1, cytochrome o ubiquinol oxidase, subunit I	NA|232aa|up_1|NZ_CP050994.1_621593_622289_+	PRK10663, PRK10663, cytochrome o ubiquinol oxidase subunit III; Provisional	NA|110aa|up_0|NZ_CP050994.1_622288_622618_+	PRK10582, PRK10582, cytochrome o ubiquinol oxidase subunit IV; Provisional	NA|454aa|down_0|NZ_CP050994.1_623820_625182_+	cd17472, MFS_YajR_like, Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily	NA|123aa|down_1|NZ_CP050994.1_625239_625608_+	pfam07237, DUF1428, Protein of unknown function (DUF1428)	NA|368aa|down_2|NZ_CP050994.1_625670_626774_-	cd06259, YdcF-like, YdcF-like	NA|298aa|down_3|NZ_CP050994.1_626922_627816_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|141aa|down_4|NZ_CP050994.1_627982_628405_+	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown]	NA|145aa|down_5|NZ_CP050994.1_628593_629028_+	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ	NA|81aa|down_6|NZ_CP050994.1_629283_629526_-	pfam11730, DUF3297, Protein of unknown function (DUF3297)	NA|434aa|down_7|NZ_CP050994.1_629624_630926_-	cd17809, HipA_So_like, type II toxin-antitoxin sytem toxin HipA from Shewanella oneidensis and similar proteins	NA|99aa|down_8|NZ_CP050994.1_630912_631209_-	TIGR03070, couple_hipB, transcriptional regulator, y4mF family	NA|299aa|down_9|NZ_CP050994.1_632191_633088_-	NA
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	5	985374-985491	5	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	CCGCCGTGGCTTAACTGGATTTCTCTCAT	29	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA,NA	NA|568aa|up_9|NZ_CP050994.1_974886_976590_+	PRK10467, PRK10467, hydrogenase 2 large subunit; Provisional	NA|177aa|up_8|NZ_CP050994.1_976589_977120_+	PRK10466, hybD, HyaD/HybD family hydrogenase maturation endopeptidase	NA|177aa|up_7|NZ_CP050994.1_977101_977632_+	PRK10465, PRK10465, hydrogenase-2 assembly chaperone	NA|543aa|up_6|NZ_CP050994.1_977735_979364_+	cd08518, PBP2_NikA_DppA_OppA_like_19, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|326aa|up_5|NZ_CP050994.1_979375_980353_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|271aa|up_4|NZ_CP050994.1_980342_981155_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|263aa|up_3|NZ_CP050994.1_981148_981937_+	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|214aa|up_2|NZ_CP050994.1_981936_982578_+	COG1124, DppF, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|374aa|up_1|NZ_CP050994.1_982868_983990_-	PRK10463, PRK10463, hydrogenase nickel incorporation protein HypB; Provisional	NA|114aa|up_0|NZ_CP050994.1_983991_984333_-	pfam01155, HypA, Hydrogenase/urease nickel incorporation, metallochaperone, hypA	NA|84aa|down_0|NZ_CP050994.1_986599_986851_-	COG0298, HypC, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]	NA|806aa|down_1|NZ_CP050994.1_986856_989274_-	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]	NA|200aa|down_2|NZ_CP050994.1_990079_990679_+	PRK00076, recR, recombination protein RecR; Reviewed	NA|638aa|down_3|NZ_CP050994.1_990972_992886_+	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|215aa|down_4|NZ_CP050994.1_993143_993788_+	PRK00279, adk, adenylate kinase; Reviewed	NA|325aa|down_5|NZ_CP050994.1_993942_994917_+	PRK00035, hemH, ferrochelatase; Reviewed	NA|131aa|down_6|NZ_CP050994.1_994981_995374_+	COG3788, COG3788, Uncharacterized relative of glutathione S-transferase, MAPEG superfamily [General function prediction only]	NA|435aa|down_7|NZ_CP050994.1_995560_996865_+	PRK15074, PRK15074, inosine/guanosine kinase; Provisional	NA|527aa|down_8|NZ_CP050994.1_997074_998655_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|121aa|down_9|NZ_CP050994.1_998769_999132_+	pfam11042, DUF2750, Protein of unknown function (DUF2750)
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	6	1619069-1619221	6	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	TGAGGGTCATGACGACAGCGCTACATTGGCGCTCATTGCCAATCCACAAGGGG	53	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA|82aa|up_9|NZ_CP050994.1_1604665_1604911_-,NA|240aa|up_5|NZ_CP050994.1_1610883_1611603_-,NA|282aa|down_6|NZ_CP050994.1_1625056_1625902_-	NA|82aa|up_9|NZ_CP050994.1_1604665_1604911_-	NA	NA|419aa|up_8|NZ_CP050994.1_1605570_1606827_+	cd05665, M20_Acy1_IAAspH, M20 Peptidases aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase	NA|227aa|up_7|NZ_CP050994.1_1606899_1607580_-	PRK09449, PRK09449, dUMP phosphatase; Provisional	NA|495aa|up_6|NZ_CP050994.1_1607609_1609094_-	cd00433, Peptidase_M17, Cytosol aminopeptidase family, N-terminal and catalytic domains	NA|240aa|up_5|NZ_CP050994.1_1610883_1611603_-	NA	NA|296aa|up_4|NZ_CP050994.1_1613603_1614491_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|306aa|up_3|NZ_CP050994.1_1614649_1615567_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|312aa|up_2|NZ_CP050994.1_1615619_1616555_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|260aa|up_1|NZ_CP050994.1_1616562_1617342_-	PRK10621, PRK10621, hypothetical protein; Provisional	NA|262aa|up_0|NZ_CP050994.1_1617673_1618459_-	COG3148, COG3148, Uncharacterized conserved protein [Function unknown]	NA|329aa|down_0|NZ_CP050994.1_1619346_1620333_-	PRK01966, ddl, D-alanine--D-alanine ligase	NA|159aa|down_1|NZ_CP050994.1_1621364_1621841_+	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]	NA|467aa|down_2|NZ_CP050994.1_1622118_1623519_+	PRK10590, PRK10590, ATP-dependent RNA helicase RhlE; Provisional	NA|147aa|down_3|NZ_CP050994.1_1623593_1624034_-	PRK10514, PRK10514, putative acetyltransferase; Provisional	NA|154aa|down_4|NZ_CP050994.1_1624092_1624554_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|111aa|down_5|NZ_CP050994.1_1624589_1624922_-	PRK02237, PRK02237, YnfA family protein	NA|282aa|down_6|NZ_CP050994.1_1625056_1625902_-	NA	NA|191aa|down_7|NZ_CP050994.1_1626172_1626745_+	cd07890, CYTH-like_AC_IV-like, Adenylyl cyclase (AC) class IV-like, a subgroup of the CYTH-like superfamily	NA|131aa|down_8|NZ_CP050994.1_1626741_1627134_+	cd04690, Nudix_Hydrolase_31, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|169aa|down_9|NZ_CP050994.1_1627249_1627756_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	7	1774903-1774976	7	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	AACAAGATCATGCATATGCTCTA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA|255aa|up_5|NZ_CP050994.1_1766589_1767354_-,NA|136aa|down_3|NZ_CP050994.1_1777418_1777826_-,NA|181aa|down_6|NZ_CP050994.1_1779470_1780013_-	NA|198aa|up_9|NZ_CP050994.1_1763136_1763730_+	PRK00393, ribA, GTP cyclohydrolase II RibA	NA|304aa|up_8|NZ_CP050994.1_1763802_1764714_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|407aa|up_7|NZ_CP050994.1_1764807_1766028_+	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|185aa|up_6|NZ_CP050994.1_1766041_1766596_-	pfam06185, YecM, YecM protein	NA|255aa|up_5|NZ_CP050994.1_1766589_1767354_-	NA	NA|242aa|up_4|NZ_CP050994.1_1767513_1768239_-	PRK10765, PRK10765, oxygen-insensitive NADPH nitroreductase	NA|521aa|up_3|NZ_CP050994.1_1768306_1769869_-	COG2978, AbgT, Putative p-aminobenzoyl-glutamate transporter [Coenzyme metabolism]	NA|670aa|up_2|NZ_CP050994.1_1769954_1771964_-	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|234aa|up_1|NZ_CP050994.1_1772133_1772835_+	pfam11201, DUF2982, Protein of unknown function (DUF2982)	NA|315aa|up_0|NZ_CP050994.1_1772912_1773857_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|144aa|down_0|NZ_CP050994.1_1775036_1775468_+	pfam08448, PAS_4, PAS fold	NA|339aa|down_1|NZ_CP050994.1_1775534_1776551_-	PLN02721, PLN02721, threonine aldolase	NA|236aa|down_2|NZ_CP050994.1_1776637_1777345_-	PRK09009, PRK09009, SDR family oxidoreductase	NA|136aa|down_3|NZ_CP050994.1_1777418_1777826_-	NA	NA|300aa|down_4|NZ_CP050994.1_1778004_1778904_+	COG4989, COG4989, Predicted oxidoreductase [General function prediction only]	NA|93aa|down_5|NZ_CP050994.1_1778980_1779259_-	cd12399, RRM_HP0827_like, RNA recognition motif in Helicobacter pylori HP0827 protein and similar proteins	NA|181aa|down_6|NZ_CP050994.1_1779470_1780013_-	NA	NA|248aa|down_7|NZ_CP050994.1_1780176_1780920_+	PRK09429, mepA, penicillin-insensitive murein endopeptidase; Reviewed	NA|197aa|down_8|NZ_CP050994.1_1780977_1781568_+	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|241aa|down_9|NZ_CP050994.1_1781564_1782287_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	8	2007898-2008057	8	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	CAATAAGGCATCTGCCATGGTCGGCGTGATCACCAACGATCTATCTTCCGCCCA	54	1	1	2007952-2008003	NZ_CP050994.1_2008055-2008106	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA|80aa|up_9|NZ_CP050994.1_1992894_1993134_+,NA	NA|80aa|up_9|NZ_CP050994.1_1992894_1993134_+	NA	NA|390aa|up_8|NZ_CP050994.1_1993202_1994372_-	pfam07759, DUF1615, Protein of unknown function (DUF1615)	NA|302aa|up_7|NZ_CP050994.1_1994514_1995420_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|553aa|up_6|NZ_CP050994.1_1995690_1997349_-	PRK03739, PRK03739, 2-isopropylmalate synthase; Validated	NA|321aa|up_5|NZ_CP050994.1_1997710_1998673_-	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain	NA|1075aa|up_4|NZ_CP050994.1_1998822_2002047_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|379aa|up_3|NZ_CP050994.1_2002063_2003200_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|271aa|up_2|NZ_CP050994.1_2003868_2004681_-	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|449aa|up_1|NZ_CP050994.1_2005002_2006349_+	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion]	NA|199aa|up_0|NZ_CP050994.1_2006482_2007079_+	PRK10333, PRK10333, 5-formyltetrahydrofolate cyclo-ligase family protein; Provisional	NA|411aa|down_0|NZ_CP050994.1_2008362_2009595_+	PRK11790, PRK11790, phosphoglycerate dehydrogenase	NA|127aa|down_1|NZ_CP050994.1_2009805_2010186_-	cd14264, DAGK_IM, Integral membrane diacylglycerol kinase	NA|355aa|down_2|NZ_CP050994.1_2010327_2011392_+	PRK12756, PRK12756, Trp-sensitive 3-deoxy-7-phosphoheptulonate synthase AroH	NA|262aa|down_3|NZ_CP050994.1_2011497_2012283_-	PRK03695, PRK03695, vitamin B12-transporter ATPase; Provisional	NA|336aa|down_4|NZ_CP050994.1_2012269_2013277_-	PRK03784, PRK03784, vtamin B12-transporter permease; Provisional	NA|250aa|down_5|NZ_CP050994.1_2013363_2014113_-	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3	NA|119aa|down_6|NZ_CP050994.1_2014225_2014582_+	pfam04342, DMT_6, Putative member of DMT superfamily (DUF486)	NA|380aa|down_7|NZ_CP050994.1_2014637_2015777_+	COG5008, PilU, Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion]	NA|424aa|down_8|NZ_CP050994.1_2016068_2017340_+	PRK00725, glgC, glucose-1-phosphate adenylyltransferase; Provisional	NA|81aa|down_9|NZ_CP050994.1_2017443_2017686_-	pfam09012, FeoC, FeoC like transcriptional regulator
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	9	2047445-2047579	9	CRISPRCasFinder	no	DinG	csa3,DEDDh,WYL,DinG	Type IV-A	CCATCTCCCTCACCCTTCCTCAAAGGGAAATGACGGATTATTGCCCT	47	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA|50aa|up_9|NZ_CP050994.1_2038106_2038256_+,NA|54aa|up_8|NZ_CP050994.1_2038528_2038690_+,NA|70aa|up_7|NZ_CP050994.1_2038892_2039102_+,NA|314aa|down_4|NZ_CP050994.1_2053993_2054935_-	NA|50aa|up_9|NZ_CP050994.1_2038106_2038256_+	NA	NA|54aa|up_8|NZ_CP050994.1_2038528_2038690_+	NA	NA|70aa|up_7|NZ_CP050994.1_2038892_2039102_+	NA	NA|185aa|up_6|NZ_CP050994.1_2039818_2040373_-	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA|618aa|up_5|NZ_CP050994.1_2040666_2042520_-	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|215aa|up_4|NZ_CP050994.1_2042647_2043292_-	PRK09483, PRK09483, response regulator; Provisional	NA|250aa|up_3|NZ_CP050994.1_2043502_2044252_-	PRK05450, PRK05450, 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional	NA|67aa|up_2|NZ_CP050994.1_2044248_2044449_-	COG2835, COG2835, Uncharacterized conserved protein [Function unknown]	NA|332aa|up_1|NZ_CP050994.1_2044602_2045598_-	PRK00652, lpxK, tetraacyldisaccharide 4'-kinase; Reviewed	NA|590aa|up_0|NZ_CP050994.1_2045597_2047367_-	PRK11176, PRK11176, lipid A ABC transporter ATP-binding protein/permease MsbA	NA|173aa|down_0|NZ_CP050994.1_2049945_2050464_+	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062)	NA|165aa|down_1|NZ_CP050994.1_2050457_2050952_+	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062)	NA|502aa|down_2|NZ_CP050994.1_2051078_2052584_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|397aa|down_3|NZ_CP050994.1_2052656_2053847_-	PRK09257, PRK09257, aromatic amino acid transaminase	NA|314aa|down_4|NZ_CP050994.1_2053993_2054935_-	NA	NA|353aa|down_5|NZ_CP050994.1_2055135_2056194_-	COG3203, OmpC, Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane]	DinG|696aa|down_6|NZ_CP050994.1_2056579_2058667_+	PRK11747, dinG, ATP-dependent DNA helicase DinG; Provisional	NA|220aa|down_7|NZ_CP050994.1_2058811_2059471_+	pfam09829, DUF2057, Uncharacterized protein conserved in bacteria (DUF2057)	NA|299aa|down_8|NZ_CP050994.1_2059543_2060440_+	cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11	NA|383aa|down_9|NZ_CP050994.1_2060599_2061748_-	PRK03633, PRK03633, putative MFS family transporter protein; Provisional
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	10	2083218-2083322	10	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	ATGCCTTAGCCGTTGAACCGACCG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA|181aa|up_2|NZ_CP050994.1_2080407_2080950_-,NA|47aa|down_5|NZ_CP050994.1_2089720_2089861_+,NA|62aa|down_6|NZ_CP050994.1_2090063_2090249_-	NA|376aa|up_9|NZ_CP050994.1_2071912_2073040_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|263aa|up_8|NZ_CP050994.1_2073503_2074292_+	cd13629, PBP2_Dsm1740, Amino acid-binding domain of the type 2 periplasmic binding fold superfamily	NA|320aa|up_7|NZ_CP050994.1_2074388_2075348_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|248aa|up_6|NZ_CP050994.1_2075437_2076181_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|280aa|up_5|NZ_CP050994.1_2076908_2077748_+	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|467aa|up_4|NZ_CP050994.1_2077819_2079220_-	TIGR00905, Arginine/ornithine_antiporter, transporter, basic amino acid/polyamine antiporter (APA) family	NA|301aa|up_3|NZ_CP050994.1_2079229_2080132_-	pfam02574, S-methyl_trans, Homocysteine S-methyltransferase	NA|181aa|up_2|NZ_CP050994.1_2080407_2080950_-	NA	NA|440aa|up_1|NZ_CP050994.1_2080969_2082289_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|237aa|up_0|NZ_CP050994.1_2082481_2083192_-	PRK11115, PRK11115, phosphate signaling complex protein PhoU	NA|273aa|down_0|NZ_CP050994.1_2083363_2084182_-	PRK14236, PRK14236, phosphate transporter ATP-binding protein; Provisional	NA|550aa|down_1|NZ_CP050994.1_2084289_2085939_-	COG4985, COG4985, ABC-type phosphate transport system, auxiliary component [Inorganic ion transport and metabolism]	NA|746aa|down_2|NZ_CP050994.1_2085990_2088228_-	COG4590, COG4590, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|180aa|down_3|NZ_CP050994.1_2088432_2088972_-	PRK10860, PRK10860, tRNA-specific adenosine deaminase; Provisional	NA|54aa|down_4|NZ_CP050994.1_2088968_2089130_-	PRK10860, PRK10860, tRNA-specific adenosine deaminase; Provisional	NA|47aa|down_5|NZ_CP050994.1_2089720_2089861_+	NA	NA|62aa|down_6|NZ_CP050994.1_2090063_2090249_-	NA	NA|536aa|down_7|NZ_CP050994.1_2090564_2092172_+	PRK09255, PRK09255, malate synthase; Validated	NA|438aa|down_8|NZ_CP050994.1_2092244_2093558_+	PRK15063, PRK15063, isocitrate lyase; Provisional	NA|234aa|down_9|NZ_CP050994.1_2093668_2094370_-	PRK08084, PRK08084, DnaA inactivator Hda
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	11	2535289-2535378	11	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	GTAACTCGCTCATCACGCCTCCTGTTCA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA,NA	NA|294aa|up_9|NZ_CP050994.1_2523078_2523960_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|204aa|up_8|NZ_CP050994.1_2524105_2524717_-	PRK11570, PRK11570, peptidyl-prolyl cis-trans isomerase; Provisional	NA|242aa|up_7|NZ_CP050994.1_2524896_2525622_-	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism]	NA|169aa|up_6|NZ_CP050994.1_2526677_2527184_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|270aa|up_5|NZ_CP050994.1_2527171_2527981_-	cd07331, M48C_Oma1_like, Peptidase M48C, integral membrane endopeptidase	NA|325aa|up_4|NZ_CP050994.1_2528146_2529121_-	cd13566, PBP2_phosphate, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|432aa|up_3|NZ_CP050994.1_2529410_2530706_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_2|NZ_CP050994.1_2530714_2531404_-	TIGR02154, PhoB, phosphate regulon transcriptional regulatory protein PhoB	NA|137aa|up_1|NZ_CP050994.1_2531506_2531917_-	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|427aa|up_0|NZ_CP050994.1_2532046_2533327_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|506aa|down_0|NZ_CP050994.1_2535591_2537109_+	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like	NA|265aa|down_1|NZ_CP050994.1_2537169_2537964_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|296aa|down_2|NZ_CP050994.1_2538060_2538948_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|231aa|down_3|NZ_CP050994.1_2539025_2539718_-	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|517aa|down_4|NZ_CP050994.1_2541305_2542856_-	PRK13529, PRK13529, oxaloacetate-decarboxylating malate dehydrogenase	NA|437aa|down_5|NZ_CP050994.1_2542878_2544189_-	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family	NA|158aa|down_6|NZ_CP050994.1_2544406_2544880_+	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional	NA|352aa|down_7|NZ_CP050994.1_2544881_2545937_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|343aa|down_8|NZ_CP050994.1_2545947_2546976_+	pfam11168, DUF2955, Protein of unknown function (DUF2955)	NA|291aa|down_9|NZ_CP050994.1_2547461_2548334_+	pfam02485, Branch, Core-2/I-Branching enzyme
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	12	2549806-2549927	12	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	CGCCAGGCGTCGAGGTCGTGAATGATCTGGTTGC	34	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA,NA|325aa|down_1|NZ_CP050994.1_2553154_2554129_+,NA|84aa|down_7|NZ_CP050994.1_2562528_2562780_-	NA|231aa|up_9|NZ_CP050994.1_2539025_2539718_-	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]	NA|517aa|up_8|NZ_CP050994.1_2541305_2542856_-	PRK13529, PRK13529, oxaloacetate-decarboxylating malate dehydrogenase	NA|437aa|up_7|NZ_CP050994.1_2542878_2544189_-	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family	NA|158aa|up_6|NZ_CP050994.1_2544406_2544880_+	PRK03573, PRK03573, transcriptional regulator SlyA; Provisional	NA|352aa|up_5|NZ_CP050994.1_2544881_2545937_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|343aa|up_4|NZ_CP050994.1_2545947_2546976_+	pfam11168, DUF2955, Protein of unknown function (DUF2955)	NA|291aa|up_3|NZ_CP050994.1_2547461_2548334_+	pfam02485, Branch, Core-2/I-Branching enzyme	NA|120aa|up_2|NZ_CP050994.1_2548443_2548803_+	COG3895, COG3895, Predicted periplasmic protein [General function prediction only]	NA|132aa|up_1|NZ_CP050994.1_2548865_2549261_-	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal	NA|57aa|up_0|NZ_CP050994.1_2549426_2549597_-	pfam01679, Pmp3, Proteolipid membrane potential modulator	NA|706aa|down_0|NZ_CP050994.1_2550604_2552722_-	PRK09263, PRK09263, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|325aa|down_1|NZ_CP050994.1_2553154_2554129_+	NA	NA|669aa|down_2|NZ_CP050994.1_2554188_2556195_-	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|376aa|down_3|NZ_CP050994.1_2556294_2557422_-	PRK03427, PRK03427, cell division protein ZipA; Provisional	NA|1125aa|down_4|NZ_CP050994.1_2557437_2560812_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|255aa|down_5|NZ_CP050994.1_2560922_2561687_+	PRK04949, PRK04949, putative sulfate transport protein CysZ; Validated	NA|205aa|down_6|NZ_CP050994.1_2561821_2562436_+	COG2860, COG2860, Predicted membrane protein [Function unknown]	NA|84aa|down_7|NZ_CP050994.1_2562528_2562780_-	NA	NA|182aa|down_8|NZ_CP050994.1_2562841_2563387_-	pfam05951, Peptidase_M15_2, Bacterial protein of unknown function (DUF882)	NA|494aa|down_9|NZ_CP050994.1_2563535_2565017_-	COG2989, COG2989, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	13	2710523-2710633	13	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	AGCCCGTAACGCAGCTTGAGCGTATCGGGATG	32	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA,NA|210aa|down_0|NZ_CP050994.1_2711715_2712345_-	NA|181aa|up_9|NZ_CP050994.1_2702508_2703051_-	pfam16036, Chalcone_3, Chalcone isomerase-like	NA|73aa|up_8|NZ_CP050994.1_2703007_2703226_-	pfam09493, DUF2389, Tryptophan-rich protein (DUF2389)	NA|160aa|up_7|NZ_CP050994.1_2703222_2703702_-	pfam11086, DUF2878, Protein of unknown function (DUF2878)	NA|419aa|up_6|NZ_CP050994.1_2703704_2704961_-	COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]	NA|252aa|up_5|NZ_CP050994.1_2704960_2705716_-	pfam07103, DUF1365, Protein of unknown function (DUF1365)	NA|420aa|up_4|NZ_CP050994.1_2705712_2706972_-	COG2907, COG2907, Predicted NAD/FAD-binding protein [General function prediction only]	NA|245aa|up_3|NZ_CP050994.1_2706968_2707703_-	PRK06101, PRK06101, SDR family oxidoreductase	NA|143aa|up_2|NZ_CP050994.1_2707699_2708128_-	pfam12680, SnoaL_2, SnoaL-like domain	NA|479aa|up_1|NZ_CP050994.1_2708129_2709566_-	PRK10674, PRK10674, deoxyribodipyrimidine photolyase; Provisional	NA|296aa|up_0|NZ_CP050994.1_2709562_2710450_-	cd01104, HTH_MlrA-CarA, Helix-Turn-Helix DNA binding domain of the transcription regulators MlrA and CarA	NA|210aa|down_0|NZ_CP050994.1_2711715_2712345_-	NA	NA|185aa|down_1|NZ_CP050994.1_2712527_2713082_-	pfam11355, DUF3157, Protein of unknown function (DUF3157)	NA|199aa|down_2|NZ_CP050994.1_2714147_2714744_-	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive	NA|391aa|down_3|NZ_CP050994.1_2715069_2716242_+	PRK10622, pheA, bifunctional chorismate mutase/prephenate dehydratase; Provisional	NA|142aa|down_4|NZ_CP050994.1_2716579_2717005_-	COG3018, COG3018, Uncharacterized protein conserved in bacteria [Function unknown]	NA|207aa|down_5|NZ_CP050994.1_2717018_2717639_-	pfam17680, FlgO, FlgO protein	NA|385aa|down_6|NZ_CP050994.1_2717924_2719079_+	pfam16539, FlgT_M, Flagellar assembly protein T, middle domain	NA|406aa|down_7|NZ_CP050994.1_2719406_2720624_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|711aa|down_8|NZ_CP050994.1_2720613_2722746_-	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family	NA|434aa|down_9|NZ_CP050994.1_2722774_2724076_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	14	2733939-2734063	14	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	CTCTGGCTCACCCCTTGCTCTGCTCCCTCACGCC	34	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA|152aa|up_1|NZ_CP050994.1_2731901_2732357_+,NA	NA|142aa|up_9|NZ_CP050994.1_2716579_2717005_-	COG3018, COG3018, Uncharacterized protein conserved in bacteria [Function unknown]	NA|207aa|up_8|NZ_CP050994.1_2717018_2717639_-	pfam17680, FlgO, FlgO protein	NA|385aa|up_7|NZ_CP050994.1_2717924_2719079_+	pfam16539, FlgT_M, Flagellar assembly protein T, middle domain	NA|406aa|up_6|NZ_CP050994.1_2719406_2720624_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|711aa|up_5|NZ_CP050994.1_2720613_2722746_-	TIGR03375, type_I_sec_LssB, type I secretion system ATPase, LssB family	NA|434aa|up_4|NZ_CP050994.1_2722774_2724076_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|879aa|up_3|NZ_CP050994.1_2724069_2726706_-	pfam13469, Sulfotransfer_3, Sulfotransferase family	NA|1563aa|up_2|NZ_CP050994.1_2726777_2731466_-	cd11304, Cadherin_repeat, Cadherin tandem repeat domain	NA|152aa|up_1|NZ_CP050994.1_2731901_2732357_+	NA	NA|275aa|up_0|NZ_CP050994.1_2733094_2733919_+	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family	NA|547aa|down_0|NZ_CP050994.1_2734238_2735879_-	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|354aa|down_1|NZ_CP050994.1_2736158_2737220_+	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase	NA|52aa|down_2|NZ_CP050994.1_2737262_2737418_+	COG5510, COG5510, Predicted small secreted protein [Function unknown]	NA|263aa|down_3|NZ_CP050994.1_2737437_2738226_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|303aa|down_4|NZ_CP050994.1_2738480_2739389_+	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]	NA|418aa|down_5|NZ_CP050994.1_2739385_2740639_+	COG3395, COG3395, Uncharacterized protein conserved in bacteria [Function unknown]	NA|211aa|down_6|NZ_CP050994.1_2740631_2741264_+	PRK08130, PRK08130, putative aldolase; Validated	NA|258aa|down_7|NZ_CP050994.1_2741260_2742034_+	COG3622, Hfi, Hydroxypyruvate isomerase [Carbohydrate transport and metabolism]	NA|317aa|down_8|NZ_CP050994.1_2742077_2743028_+	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs	NA|502aa|down_9|NZ_CP050994.1_2743024_2744530_+	pfam02447, GntP_permease, GntP family permease
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	15	2955018-2955153	15	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	CTGGCCCTTTCAATCCCTGTTTCTTTGACCTATCCGAAGGTGAACTGTTG	50	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA,NA|293aa|down_9|NZ_CP050994.1_2962897_2963776_+	NA|137aa|up_9|NZ_CP050994.1_2943413_2943824_-	cd08352, VOC_Bs_YwkD_like, vicinal oxygen chelate (VOC) family protein  Bacillus subtilis YwkD and similar proteins	NA|774aa|up_8|NZ_CP050994.1_2943865_2946187_-	TIGR02071, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1B	NA|816aa|up_7|NZ_CP050994.1_2946442_2948890_-	PRK11664, PRK11664, ATP-dependent RNA helicase HrpB; Provisional	NA|182aa|up_6|NZ_CP050994.1_2949113_2949659_+	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase	NA|246aa|up_5|NZ_CP050994.1_2949655_2950393_+	PRK00347, PRK00347, DNA/RNA nuclease SfsA	NA|150aa|up_4|NZ_CP050994.1_2950518_2950968_+	PRK10778, dksA, RNA polymerase-binding protein DksA	NA|301aa|up_3|NZ_CP050994.1_2951081_2951984_+	TIGR03838, queuosine_YadB, glutamyl-queuosine tRNA(Asp) synthetase	NA|491aa|up_2|NZ_CP050994.1_2952171_2953644_+	PRK11623, pcnB, poly(A) polymerase I; Provisional	NA|166aa|up_1|NZ_CP050994.1_2953654_2954152_+	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]	NA|265aa|up_0|NZ_CP050994.1_2954170_2954965_+	PRK00311, panB, 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed	NA|116aa|down_0|NZ_CP050994.1_2956028_2956376_+	COG1359, COG1359, Uncharacterized conserved protein [Function unknown]	NA|258aa|down_1|NZ_CP050994.1_2956434_2957208_-	PRK15066, PRK15066, inner membrane transport permease; Provisional	NA|306aa|down_2|NZ_CP050994.1_2957204_2958122_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|177aa|down_3|NZ_CP050994.1_2958234_2958765_-	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]	NA|205aa|down_4|NZ_CP050994.1_2958966_2959581_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|204aa|down_5|NZ_CP050994.1_2959660_2960272_-	PRK05920, PRK05920, aromatic acid decarboxylase; Validated	NA|455aa|down_6|NZ_CP050994.1_2960268_2961633_-	TIGR01081, mpl, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	NA|177aa|down_7|NZ_CP050994.1_2961866_2962397_+	PRK01250, PRK01250, inorganic diphosphatase	NA|112aa|down_8|NZ_CP050994.1_2962423_2962759_-	PRK03987, PRK03987, translation initiation factor IF-2 subunit alpha; Validated	NA|293aa|down_9|NZ_CP050994.1_2962897_2963776_+	NA
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	16	3030636-3030775	16	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	ACCCGGACATGCAGCCAAACCCCAAGCCGACAGTGCTGAC	40	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA,NA|137aa|down_0|NZ_CP050994.1_3030835_3031246_-,NA|114aa|down_4|NZ_CP050994.1_3034080_3034422_-,NA|142aa|down_7|NZ_CP050994.1_3036836_3037262_+	NA|246aa|up_9|NZ_CP050994.1_3020087_3020825_-	PRK05265, PRK05265, pyridoxine 5'-phosphate synthase; Provisional	NA|236aa|up_8|NZ_CP050994.1_3020968_3021676_-	PRK00085, recO, DNA repair protein RecO; Reviewed	NA|302aa|up_7|NZ_CP050994.1_3021690_3022596_-	PRK00089, era, GTPase Era; Reviewed	NA|224aa|up_6|NZ_CP050994.1_3022592_3023264_-	PRK00102, rnc, ribonuclease III; Reviewed	NA|308aa|up_5|NZ_CP050994.1_3023264_3024188_-	PRK10861, PRK10861, signal peptidase I	NA|598aa|up_4|NZ_CP050994.1_3024191_3025985_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|154aa|up_3|NZ_CP050994.1_3026155_3026617_-	pfam04246, RseC_MucC, Positive regulator of sigma(E), RseC/MucC	NA|327aa|up_2|NZ_CP050994.1_3026707_3027688_-	PRK09455, rseB, anti-sigma E factor; Provisional	NA|196aa|up_1|NZ_CP050994.1_3027709_3028297_-	PRK10863, PRK10863, anti-sigma-E factor RseA	NA|194aa|up_0|NZ_CP050994.1_3028320_3028902_-	PRK11923, algU, RNA polymerase sigma factor AlgU; Provisional	NA|137aa|down_0|NZ_CP050994.1_3030835_3031246_-	NA	NA|90aa|down_1|NZ_CP050994.1_3031252_3031522_-	COG2938, COG2938, Uncharacterized conserved protein [Function unknown]	NA|304aa|down_2|NZ_CP050994.1_3031635_3032547_+	PRK09559, PRK09559, putative global regulator; Reviewed	NA|146aa|down_3|NZ_CP050994.1_3033565_3034003_+	COG4125, COG4125, Predicted membrane protein [Function unknown]	NA|114aa|down_4|NZ_CP050994.1_3034080_3034422_-	NA	NA|106aa|down_5|NZ_CP050994.1_3034616_3034934_+	pfam03091, CutA1, CutA1 divalent ion tolerance protein	NA|592aa|down_6|NZ_CP050994.1_3034930_3036706_+	PRK00293, dipZ, thiol:disulfide interchange protein precursor; Provisional	NA|142aa|down_7|NZ_CP050994.1_3036836_3037262_+	NA	NA|435aa|down_8|NZ_CP050994.1_3037299_3038604_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|360aa|down_9|NZ_CP050994.1_3038816_3039896_-	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	17	3097975-3098193	17	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	CCGCCTTCCCCAGCATGTTCCGCAACTACGCCGAGTTATTGCCGCTGGC	49	0	0	NA	NA	NA	2	2	Orphan	csa3,DEDDh,WYL,DinG	NA,NA	NA|134aa|up_9|NZ_CP050994.1_3087284_3087686_+	COG1380, COG1380, Putative effector of murein hydrolase LrgA [General function prediction only]	NA|230aa|up_8|NZ_CP050994.1_3087678_3088368_+	COG1346, LrgB, Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane]	NA|823aa|up_7|NZ_CP050994.1_3088435_3090904_-	PRK09466, metL, bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional	NA|393aa|up_6|NZ_CP050994.1_3090903_3092082_-	TIGR02080, Cystathionine_gamma-synthase, O-succinylhomoserine (thiol)-lyase	NA|108aa|up_5|NZ_CP050994.1_3092376_3092700_+	PRK05264, PRK05264, met regulon transcriptional regulator MetJ	NA|113aa|up_4|NZ_CP050994.1_3093568_3093907_+	PRK10089, PRK10089, chaperone CsaA	NA|423aa|up_3|NZ_CP050994.1_3093980_3095249_-	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|271aa|up_2|NZ_CP050994.1_3095661_3096474_-	TIGR01331, 3'2'5'-bisphosphate_nucleotidase_CysQ, 3'(2'),5'-bisphosphate nucleotidase, bacterial	NA|203aa|up_1|NZ_CP050994.1_3096515_3097124_-	PRK11762, nudE, adenosine nucleotide hydrolase NudE; Provisional	NA|223aa|up_0|NZ_CP050994.1_3097270_3097939_+	PRK14988, PRK14988, GMP/IMP nucleotidase; Provisional	NA|423aa|down_0|NZ_CP050994.1_3098302_3099571_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|294aa|down_1|NZ_CP050994.1_3099716_3100598_+	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|257aa|down_2|NZ_CP050994.1_3100651_3101422_-	PRK02134, PRK02134, chitin disaccharide deacetylase	NA|449aa|down_3|NZ_CP050994.1_3101470_3102817_-	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase	NA|276aa|down_4|NZ_CP050994.1_3102970_3103798_-	PRK10296, PRK10296, DNA-binding transcriptional regulator ChbR; Provisional	NA|118aa|down_5|NZ_CP050994.1_3103830_3104184_-	PRK10454, PRK10454, PTS N,N'-diacetylchitobiose transporter subunit IIA	NA|461aa|down_6|NZ_CP050994.1_3104240_3105623_-	COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]	NA|454aa|down_7|NZ_CP050994.1_3105677_3107039_-	PRK10297, PRK10297, PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC; Provisional	NA|107aa|down_8|NZ_CP050994.1_3107049_3107370_-	PRK10499, PRK10499, PTS sugar transporter subunit IIB	NA|253aa|down_9|NZ_CP050994.1_3107968_3108727_-	pfam01203, T2SSN, Type II secretion system (T2SS), protein N
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	18	3274985-3275079	18	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	TGTTGAGGATGGAATTGAAGAGCTG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA|113aa|up_7|NZ_CP050994.1_3267426_3267765_-,NA|268aa|up_2|NZ_CP050994.1_3272182_3272986_+,NA	NA|153aa|up_9|NZ_CP050994.1_3265860_3266319_-	pfam03748, FliL, Flagellar basal body-associated protein FliL	NA|359aa|up_8|NZ_CP050994.1_3266359_3267436_-	cd17470, T3SS_Flik_C, C-terminal domain of flagellar hook-length control protein FliK and similar domains	NA|113aa|up_7|NZ_CP050994.1_3267426_3267765_-	NA	NA|131aa|up_6|NZ_CP050994.1_3267885_3268278_-	pfam02561, FliS, Flagellar protein FliS	NA|428aa|up_5|NZ_CP050994.1_3268316_3269600_-	COG1345, FliD, Flagellar capping protein [Cell motility and secretion]	NA|289aa|up_4|NZ_CP050994.1_3269713_3270580_-	PRK12802, PRK12802, flagellin; Provisional	NA|287aa|up_3|NZ_CP050994.1_3270774_3271635_-	PRK12802, PRK12802, flagellin; Provisional	NA|268aa|up_2|NZ_CP050994.1_3272182_3272986_+	NA	NA|334aa|up_1|NZ_CP050994.1_3273045_3274047_-	smart00787, Spc7, Spc7 kinetochore protein	NA|300aa|up_0|NZ_CP050994.1_3274066_3274966_-	PRK07192, flgL, flagellar hook-associated protein FlgL; Reviewed	NA|133aa|down_0|NZ_CP050994.1_3276365_3276764_-	PRK12708, flgJ, peptidoglycan hydrolase; Reviewed	NA|369aa|down_1|NZ_CP050994.1_3276772_3277879_-	PRK05303, flgI, flagellar basal body P-ring protein FlgI	NA|224aa|down_2|NZ_CP050994.1_3277887_3278559_-	PRK12407, flgH, flagellar basal body L-ring protein FlgH	NA|262aa|down_3|NZ_CP050994.1_3278558_3279344_-	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional	NA|245aa|down_4|NZ_CP050994.1_3279433_3280168_-	PRK12640, flgF, flagellar basal body rod protein FlgF; Reviewed	NA|398aa|down_5|NZ_CP050994.1_3280178_3281372_-	PRK06803, flgE, flagellar basal body protein FlaE	NA|228aa|down_6|NZ_CP050994.1_3281390_3282074_-	PRK06655, flgD, flagellar hook assembly protein FlgD	NA|142aa|down_7|NZ_CP050994.1_3282074_3282500_-	PRK06802, flgC, flagellar basal body rod protein FlgC; Reviewed	NA|128aa|down_8|NZ_CP050994.1_3282502_3282886_-	PRK12685, flgB, flagellar basal body rod protein FlgB; Reviewed	NA|267aa|down_9|NZ_CP050994.1_3282938_3283739_+	PRK07018, flgA, flagellar basal body P-ring formation protein FlgA
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	19	4063460-4063549	19	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	TATTCGTGTTCGAACATCAGGAACAG	26	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA,NA	NA|583aa|up_9|NZ_CP050994.1_4051214_4052963_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|224aa|up_8|NZ_CP050994.1_4053160_4053832_+	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning]	NA|318aa|up_7|NZ_CP050994.1_4053929_4054883_+	PRK11026, ftsX, cell division ABC transporter subunit FtsX; Provisional	NA|285aa|up_6|NZ_CP050994.1_4055347_4056202_+	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed	NA|220aa|up_5|NZ_CP050994.1_4056386_4057046_+	cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|235aa|up_4|NZ_CP050994.1_4057057_4057762_+	TIGR02018, Histidine_utilization_repressor, histidine utilization repressor, proteobacterial	NA|412aa|up_3|NZ_CP050994.1_4057917_4059153_+	PRK09356, PRK09356, imidazolonepropionase; Validated	NA|313aa|up_2|NZ_CP050994.1_4059145_4060084_+	PRK13776, PRK13776, formimidoylglutamase; Provisional	NA|568aa|up_1|NZ_CP050994.1_4060149_4061853_+	PRK05414, PRK05414, urocanate hydratase; Provisional	NA|511aa|up_0|NZ_CP050994.1_4061854_4063387_+	PRK09367, PRK09367, histidine ammonia-lyase; Provisional	NA|518aa|down_0|NZ_CP050994.1_4064789_4066343_-	cd01948, EAL, EAL domain	NA|640aa|down_1|NZ_CP050994.1_4066828_4068748_+	PRK11059, PRK11059, regulatory protein CsrD; Provisional	NA|316aa|down_2|NZ_CP050994.1_4068808_4069756_-	COG2515, Acd, 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]	NA|289aa|down_3|NZ_CP050994.1_4069825_4070692_+	COG4972, PilM, Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]	NA|198aa|down_4|NZ_CP050994.1_4070688_4071282_+	pfam05137, PilN, Fimbrial assembly protein (PilN)	NA|216aa|down_5|NZ_CP050994.1_4071281_4071929_+	pfam04350, PilO, Pilus assembly protein, PilO	NA|105aa|down_6|NZ_CP050994.1_4071921_4072236_+	pfam16537, T2SSB, Type II secretion system protein B	NA|560aa|down_7|NZ_CP050994.1_4072306_4073986_+	TIGR02519, related_to_type_II_protein_secretion_protein, pilus (MSHA type) biogenesis protein MshL	NA|297aa|down_8|NZ_CP050994.1_4074149_4075040_+	TIGR03015, pepcterm_ATPase, putative secretion ATPase, PEP-CTERM locus subfamily	NA|381aa|down_9|NZ_CP050994.1_4075036_4076179_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	20	4074070-4074195	20	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	ATGTACCTGAACCATTTCGGTTTGCAGGAGGCACCCTTTGGCCTGA	46	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA,NA|154aa|down_3|NZ_CP050994.1_4079324_4079786_+,NA|140aa|down_9|NZ_CP050994.1_4082904_4083324_+	NA|511aa|up_9|NZ_CP050994.1_4061854_4063387_+	PRK09367, PRK09367, histidine ammonia-lyase; Provisional	NA|366aa|up_8|NZ_CP050994.1_4063522_4064620_-	PRK10599, PRK10599, sodium-potassium/proton antiporter ChaA	NA|518aa|up_7|NZ_CP050994.1_4064789_4066343_-	cd01948, EAL, EAL domain	NA|640aa|up_6|NZ_CP050994.1_4066828_4068748_+	PRK11059, PRK11059, regulatory protein CsrD; Provisional	NA|316aa|up_5|NZ_CP050994.1_4068808_4069756_-	COG2515, Acd, 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]	NA|289aa|up_4|NZ_CP050994.1_4069825_4070692_+	COG4972, PilM, Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]	NA|198aa|up_3|NZ_CP050994.1_4070688_4071282_+	pfam05137, PilN, Fimbrial assembly protein (PilN)	NA|216aa|up_2|NZ_CP050994.1_4071281_4071929_+	pfam04350, PilO, Pilus assembly protein, PilO	NA|105aa|up_1|NZ_CP050994.1_4071921_4072236_+	pfam16537, T2SSB, Type II secretion system protein B	NA|560aa|up_0|NZ_CP050994.1_4072306_4073986_+	TIGR02519, related_to_type_II_protein_secretion_protein, pilus (MSHA type) biogenesis protein MshL	NA|381aa|down_0|NZ_CP050994.1_4075036_4076179_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|570aa|down_1|NZ_CP050994.1_4076310_4078020_+	COG2804, PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]	NA|407aa|down_2|NZ_CP050994.1_4078023_4079244_+	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion]	NA|154aa|down_3|NZ_CP050994.1_4079324_4079786_+	NA	NA|220aa|down_4|NZ_CP050994.1_4079862_4080522_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|148aa|down_5|NZ_CP050994.1_4080540_4080984_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|161aa|down_6|NZ_CP050994.1_4081050_4081533_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|192aa|down_7|NZ_CP050994.1_4081519_4082095_+	COG4967, PilV, Tfp pilus assembly protein PilV [Cell motility and secretion / Intracellular trafficking and secretion]	NA|257aa|down_8|NZ_CP050994.1_4082094_4082865_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|140aa|down_9|NZ_CP050994.1_4082904_4083324_+	NA
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	21	4168713-4168811	21	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	TGAAGGGCAAGGGGTTCGGCGACTAGCC	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA,NA	NA|310aa|up_9|NZ_CP050994.1_4158104_4159034_-	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|840aa|up_8|NZ_CP050994.1_4159356_4161876_+	PRK09450, cyaA, class I adenylate cyclase	NA|218aa|up_7|NZ_CP050994.1_4161968_4162622_-	pfam02230, Abhydrolase_2, Phospholipase/Carboxylesterase	NA|105aa|up_6|NZ_CP050994.1_4162636_4162951_-	TIGR03421, FeS_CyaY, iron donor protein CyaY	NA|69aa|up_5|NZ_CP050994.1_4163024_4163231_+	pfam13627, LPAM_2, Prokaryotic lipoprotein-attachment site	NA|417aa|up_4|NZ_CP050994.1_4163251_4164502_+	TIGR01048, Diaminopimelate_decarboxylase, diaminopimelate decarboxylase	NA|277aa|up_3|NZ_CP050994.1_4164663_4165494_+	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|227aa|up_2|NZ_CP050994.1_4165697_4166378_+	COG3159, COG3159, Uncharacterized protein conserved in bacteria [Function unknown]	NA|319aa|up_1|NZ_CP050994.1_4166370_4167327_+	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|237aa|up_0|NZ_CP050994.1_4167531_4168242_+	PRK10748, PRK10748, 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB	NA|257aa|down_0|NZ_CP050994.1_4169301_4170072_-	pfam07722, Peptidase_C26, Peptidase C26	NA|270aa|down_1|NZ_CP050994.1_4170437_4171247_-	PRK10513, PRK10513, sugar phosphate phosphatase; Provisional	NA|543aa|down_2|NZ_CP050994.1_4171530_4173159_-	pfam03961, FapA, Flagellar Assembly Protein A	NA|172aa|down_3|NZ_CP050994.1_4173608_4174124_+	PRK11648, PRK11648, metal-dependent hydrolase	NA|388aa|down_4|NZ_CP050994.1_4174131_4175295_-	PRK03673, PRK03673, nicotinamide mononucleotide deamidase-related protein YfaY	NA|413aa|down_5|NZ_CP050994.1_4175322_4176561_-	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]	NA|316aa|down_6|NZ_CP050994.1_4176705_4177653_+	PRK05368, PRK05368, homoserine O-succinyltransferase; Provisional	NA|173aa|down_7|NZ_CP050994.1_4177891_4178410_-	cd14505, CDKN3-like, cyclin-dependent kinase inhibitor 3 and similar proteins	NA|157aa|down_8|NZ_CP050994.1_4178570_4179041_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|655aa|down_9|NZ_CP050994.1_4179098_4181063_-	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	22	4355766-4355883	22	CRISPRCasFinder	no	DinG	csa3,DEDDh,WYL,DinG	Type IV-A	GTTGTGAACGGGATGCCACCGGCTAACCA	29	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA|99aa|up_9|NZ_CP050994.1_4345991_4346288_-,NA|75aa|down_3|NZ_CP050994.1_4357451_4357676_+	NA|99aa|up_9|NZ_CP050994.1_4345991_4346288_-	NA	NA|125aa|up_8|NZ_CP050994.1_4346338_4346713_-	pfam06062, UPF0231, Uncharacterized protein family (UPF0231)	NA|372aa|up_7|NZ_CP050994.1_4347058_4348174_+	COG3835, CdaR, Sugar diacid utilization regulator [Transcription / Signal transduction mechanisms]	NA|421aa|up_6|NZ_CP050994.1_4348293_4349556_+	COG2610, GntT, H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism]	NA|378aa|up_5|NZ_CP050994.1_4349565_4350699_+	pfam02595, Gly_kinase, Glycerate kinase family	NA|188aa|up_4|NZ_CP050994.1_4350901_4351465_+	pfam07298, NnrU, NnrU protein	NA|179aa|up_3|NZ_CP050994.1_4351524_4352061_+	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate	NA|312aa|up_2|NZ_CP050994.1_4352143_4353079_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|399aa|up_1|NZ_CP050994.1_4353261_4354458_+	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|285aa|up_0|NZ_CP050994.1_4354537_4355391_+	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|165aa|down_0|NZ_CP050994.1_4355887_4356382_-	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional	NA|139aa|down_1|NZ_CP050994.1_4356409_4356826_-	PRK09256, PRK09256, aminoacyl-tRNA hydrolase	NA|113aa|down_2|NZ_CP050994.1_4357027_4357366_+	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism]	NA|75aa|down_3|NZ_CP050994.1_4357451_4357676_+	NA	NA|336aa|down_4|NZ_CP050994.1_4357608_4358616_+	cd13542, PBP2_FutA1_ilke, Substrate binding domain of ferric iron-binding protein, a member of the type 2 periplasmic binding fold superfamily	NA|542aa|down_5|NZ_CP050994.1_4358655_4360281_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|345aa|down_6|NZ_CP050994.1_4360515_4361550_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|302aa|down_7|NZ_CP050994.1_4361631_4362537_+	TIGR01413, Probable_deferrochelatase/peroxidase_EfeN, Dyp-type peroxidase family	NA|157aa|down_8|NZ_CP050994.1_4362615_4363086_-	PRK05066, PRK05066, transcriptional regulator ArgR	NA|247aa|down_9|NZ_CP050994.1_4363286_4364027_+	PRK11124, artP, arginine transporter ATP-binding subunit; Provisional
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	23	4518828-4518924	23	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	GTCGGCTGGCCCGGCTGTGGCAGATAGCAGTGCCC	35	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA,NA|77aa|down_2|NZ_CP050994.1_4521526_4521757_+	NA|175aa|up_9|NZ_CP050994.1_4503861_4504386_+	PRK10802, PRK10802, peptidoglycan-associated lipoprotein Pal	NA|269aa|up_8|NZ_CP050994.1_4504544_4505351_+	PRK10803, PRK10803, tol-pal system protein YbgF; Provisional	NA|358aa|up_7|NZ_CP050994.1_4506882_4507956_+	PRK09375, PRK09375, quinolinate synthase NadA	NA|289aa|up_6|NZ_CP050994.1_4508044_4508911_-	cd09020, D-hex-6-P-epi_like, D-hexose-6-phosphate epimerase-like	NA|332aa|up_5|NZ_CP050994.1_4509019_4510015_-	PRK15425, gapA, glyceraldehyde-3-phosphate dehydrogenase	NA|730aa|up_4|NZ_CP050994.1_4510360_4512550_+	PRK11052, malQ, 4-alpha-glucanotransferase; Provisional	NA|726aa|up_3|NZ_CP050994.1_4512632_4514810_+	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB	NA|714aa|up_2|NZ_CP050994.1_4514809_4516951_+	TIGR02100, Glycogen_operon_protein_GlgX_homolog, glycogen debranching enzyme GlgX	NA|131aa|up_1|NZ_CP050994.1_4517090_4517483_+	pfam01641, SelR, SelR domain	NA|380aa|up_0|NZ_CP050994.1_4517553_4518693_-	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family	NA|335aa|down_0|NZ_CP050994.1_4519866_4520871_-	cd05288, PGDH, Prostaglandin dehydrogenases	NA|142aa|down_1|NZ_CP050994.1_4521070_4521496_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|77aa|down_2|NZ_CP050994.1_4521526_4521757_+	NA	NA|106aa|down_3|NZ_CP050994.1_4521901_4522219_+	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown]	NA|159aa|down_4|NZ_CP050994.1_4522293_4522770_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|208aa|down_5|NZ_CP050994.1_4523079_4523703_-	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|413aa|down_6|NZ_CP050994.1_4523870_4525109_+	cd17330, MFS_SLC46_TetA_like, Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters	NA|274aa|down_7|NZ_CP050994.1_4525352_4526174_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|188aa|down_8|NZ_CP050994.1_4526211_4526775_-	pfam10973, DUF2799, Protein of unknown function (DUF2799)	NA|280aa|down_9|NZ_CP050994.1_4526973_4527813_+	COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only]
GCF_012273595.1_ASM1227359v1	NZ_CP050994	Aeromonas hydrophila strain NEB724 chromosome, complete genome	24	4525258-4525359	24	CRISPRCasFinder	no		csa3,DEDDh,WYL,DinG	Orphan	ACAGTTCTTGGAGGTGATATGAGTC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,DinG	NA|77aa|up_4|NZ_CP050994.1_4521526_4521757_+,NA|155aa|down_3|NZ_CP050994.1_4532898_4533363_-	NA|131aa|up_9|NZ_CP050994.1_4517090_4517483_+	pfam01641, SelR, SelR domain	NA|380aa|up_8|NZ_CP050994.1_4517553_4518693_-	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family	NA|147aa|up_7|NZ_CP050994.1_4518885_4519326_-	cd04678, Nudix_Hydrolase_19, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|335aa|up_6|NZ_CP050994.1_4519866_4520871_-	cd05288, PGDH, Prostaglandin dehydrogenases	NA|142aa|up_5|NZ_CP050994.1_4521070_4521496_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|77aa|up_4|NZ_CP050994.1_4521526_4521757_+	NA	NA|106aa|up_3|NZ_CP050994.1_4521901_4522219_+	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown]	NA|159aa|up_2|NZ_CP050994.1_4522293_4522770_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|208aa|up_1|NZ_CP050994.1_4523079_4523703_-	COG2345, COG2345, Predicted transcriptional regulator [Transcription]	NA|413aa|up_0|NZ_CP050994.1_4523870_4525109_+	cd17330, MFS_SLC46_TetA_like, Eukaryotic Solute carrier 46 (SLC46) family, Bacterial Tetracycline resistance proteins, and similar proteins of the Major Facilitator Superfamily of transporters	NA|188aa|down_0|NZ_CP050994.1_4526211_4526775_-	pfam10973, DUF2799, Protein of unknown function (DUF2799)	NA|280aa|down_1|NZ_CP050994.1_4526973_4527813_+	COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only]	NA|438aa|down_2|NZ_CP050994.1_4529760_4531074_+	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain	NA|155aa|down_3|NZ_CP050994.1_4532898_4533363_-	NA	NA|458aa|down_4|NZ_CP050994.1_4533392_4534766_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|199aa|down_5|NZ_CP050994.1_4534882_4535479_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|197aa|down_6|NZ_CP050994.1_4535581_4536172_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|231aa|down_7|NZ_CP050994.1_4536259_4536952_+	COG1794, RacX, Aspartate racemase [Cell envelope biogenesis, outer membrane]	NA|405aa|down_8|NZ_CP050994.1_4537202_4538417_+	pfam14486, DUF4432, Domain of unknown function (DUF4432)	NA|597aa|down_9|NZ_CP050994.1_4538492_4540283_-	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
