assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_012275205.1_ASM1227520v1	NZ_CP051128	Bacillus megaterium strain S2 chromosome, complete genome	1	1296085-1296187	1	CRISPRCasFinder	no		csa3,cas14k,cas3,DEDDh,DinG	Orphan	AAAAACTAATCAAACGTTTGATTA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas14k,cas3,DEDDh,DinG	NA,NA|66aa|down_0|NZ_CP051128.1_1296382_1296580_-,NA|129aa|down_4|NZ_CP051128.1_1300882_1301269_-	NA|562aa|up_9|NZ_CP051128.1_1284195_1285881_+	cd11356, AmyAc_Sucrose_phosphorylase-like_1, Alpha amylase catalytic domain found in sucrose phosphorylase-like proteins (also called sucrose glucosyltransferase, disaccharide glucosyltransferase, and sucrose-phosphate alpha-D glucosyltransferase)	NA|433aa|up_8|NZ_CP051128.1_1285892_1287191_+	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|294aa|up_7|NZ_CP051128.1_1287216_1288098_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|285aa|up_6|NZ_CP051128.1_1288084_1288939_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|353aa|up_5|NZ_CP051128.1_1288973_1290032_+	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members	NA|265aa|up_4|NZ_CP051128.1_1290134_1290929_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|347aa|up_3|NZ_CP051128.1_1290939_1291980_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|743aa|up_2|NZ_CP051128.1_1291976_1294205_+	COG1554, ATH1, Trehalose and maltose hydrolases (possible phosphorylases) [Carbohydrate transport and metabolism]	NA|378aa|up_1|NZ_CP051128.1_1294220_1295354_+	pfam02595, Gly_kinase, Glycerate kinase family	NA|228aa|up_0|NZ_CP051128.1_1295356_1296040_+	TIGR01990, bPGM, beta-phosphoglucomutase	NA|66aa|down_0|NZ_CP051128.1_1296382_1296580_-	NA	NA|324aa|down_1|NZ_CP051128.1_1296771_1297743_-	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|450aa|down_2|NZ_CP051128.1_1297744_1299094_-	cd16412, dndB, DNA sulfur modification protein DndB	NA|409aa|down_3|NZ_CP051128.1_1299464_1300691_-	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional	NA|129aa|down_4|NZ_CP051128.1_1300882_1301269_-	NA	NA|306aa|down_5|NZ_CP051128.1_1301466_1302384_+	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|115aa|down_6|NZ_CP051128.1_1302564_1302909_+	pfam13799, DUF4183, Domain of unknown function (DUF4183)	NA|405aa|down_7|NZ_CP051128.1_1303082_1304297_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|364aa|down_8|NZ_CP051128.1_1304552_1305644_+	cd03786, GTB_UDP-GlcNAc_2-Epimerase, UDP-N-acetylglucosamine 2-epimerase and similar proteins	NA|329aa|down_9|NZ_CP051128.1_1305636_1306623_+	pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein
GCF_012275205.1_ASM1227520v1	NZ_CP051128	Bacillus megaterium strain S2 chromosome, complete genome	2	1330689-1330919	2	CRISPRCasFinder	no		csa3,cas14k,cas3,DEDDh,DinG	Orphan	AAACTAATCAAACGATTGATTAAAA	25	0	0	NA	NA	NA	3	3	Orphan	csa3,cas14k,cas3,DEDDh,DinG	NA|65aa|up_2|NZ_CP051128.1_1328648_1328843_-,NA|80aa|down_3|NZ_CP051128.1_1334191_1334431_+	NA|328aa|up_9|NZ_CP051128.1_1319936_1320920_+	pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein	NA|301aa|up_8|NZ_CP051128.1_1320943_1321846_+	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs	NA|482aa|up_7|NZ_CP051128.1_1322015_1323461_-	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|344aa|up_6|NZ_CP051128.1_1323836_1324868_+	cd03507, Delta12-FADS-like, The Delta12 Fatty Acid Desaturase (Delta12-FADS)-like CD includes the integral-membrane enzymes, delta-12 acyl-lipid desaturases, oleate 12-hydroxylases, omega3 and omega6 fatty acid desaturases, and other related proteins, found in a wide range of organisms including higher plants, green algae, diatoms, nematodes, fungi, and bacteria	NA|172aa|up_5|NZ_CP051128.1_1324949_1325465_+	cd19930, REC_DesR-like, phosphoacceptor receiver (REC) domain of DesR and similar proteins	NA|558aa|up_4|NZ_CP051128.1_1325526_1327200_-	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	NA|296aa|up_3|NZ_CP051128.1_1327351_1328239_-	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|65aa|up_2|NZ_CP051128.1_1328648_1328843_-	NA	NA|405aa|up_1|NZ_CP051128.1_1328934_1330149_-	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|140aa|up_0|NZ_CP051128.1_1330162_1330582_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|251aa|down_0|NZ_CP051128.1_1330955_1331708_-	cd02440, AdoMet_MTases, S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I;  AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)	NA|322aa|down_1|NZ_CP051128.1_1332006_1332972_+	cd05286, QOR2, Quinone oxidoreductase (QOR)	NA|288aa|down_2|NZ_CP051128.1_1333341_1334205_+	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins	NA|80aa|down_3|NZ_CP051128.1_1334191_1334431_+	NA	NA|256aa|down_4|NZ_CP051128.1_1334682_1335450_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|320aa|down_5|NZ_CP051128.1_1335437_1336397_+	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP)	NA|428aa|down_6|NZ_CP051128.1_1336398_1337682_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|211aa|down_7|NZ_CP051128.1_1337763_1338396_+	cd00452, KDPG_aldolase, KDPG and KHG aldolase	NA|326aa|down_8|NZ_CP051128.1_1338574_1339552_+	cd19977, PBP1_EndR-like, periplasmic ligand-binding domain of putative repressor of the endoglucanase operon and its close homologs	NA|214aa|down_9|NZ_CP051128.1_1339693_1340335_+	cd04726, KGPDC_HPS, 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS)
GCF_012275205.1_ASM1227520v1	NZ_CP051128	Bacillus megaterium strain S2 chromosome, complete genome	3	3658809-3658930	3	CRISPRCasFinder	no		csa3,cas14k,cas3,DEDDh,DinG	Orphan	AAGCTCTCTCCATGAAGGGATCATTCTTTTGTGTTTTTTAGAATG	45	0	0	NA	NA	NA	1	1	Orphan	csa3,cas14k,cas3,DEDDh,DinG	NA|99aa|up_5|NZ_CP051128.1_3655129_3655426_+,NA|157aa|up_4|NZ_CP051128.1_3655665_3656136_+,NA|82aa|up_3|NZ_CP051128.1_3656458_3656704_+,NA|311aa|down_8|NZ_CP051128.1_3668764_3669697_+	NA|114aa|up_9|NZ_CP051128.1_3652791_3653133_+	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|105aa|up_8|NZ_CP051128.1_3653134_3653449_+	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|123aa|up_7|NZ_CP051128.1_3653651_3654020_+	pfam01476, LysM, LysM domain	NA|287aa|up_6|NZ_CP051128.1_3654115_3654976_+	pfam16472, DUF5050, Domain of unknown function (DUF5050)	NA|99aa|up_5|NZ_CP051128.1_3655129_3655426_+	NA	NA|157aa|up_4|NZ_CP051128.1_3655665_3656136_+	NA	NA|82aa|up_3|NZ_CP051128.1_3656458_3656704_+	NA	NA|181aa|up_2|NZ_CP051128.1_3657051_3657594_+	pfam11553, DUF3231, Protein of unknown function (DUF3231)	NA|43aa|up_1|NZ_CP051128.1_3657793_3657922_+	pfam00582, Usp, Universal stress protein family	NA|193aa|up_0|NZ_CP051128.1_3658098_3658677_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|233aa|down_0|NZ_CP051128.1_3659057_3659756_+	PRK08264, PRK08264, SDR family oxidoreductase	NA|333aa|down_1|NZ_CP051128.1_3660543_3661542_+	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases	NA|542aa|down_2|NZ_CP051128.1_3661871_3663497_+	cd08489, PBP2_NikA, The substrate-binding component of an ABC-type nickel import system contains the type 2 periplasmic binding fold	NA|315aa|down_3|NZ_CP051128.1_3663514_3664459_+	TIGR02789, Nickel_transport_system_permease_protein_NikB, nickel ABC transporter, permease subunit NikB	NA|278aa|down_4|NZ_CP051128.1_3664455_3665289_+	TIGR02790, Nickel_transport_system_permease_protein_nikC	NA|276aa|down_5|NZ_CP051128.1_3665304_3666132_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|270aa|down_6|NZ_CP051128.1_3666158_3666968_+	TIGR02769, Nickel_import_ATP-binding_protein_NikE, nickel import ATP-binding protein NikE	NA|439aa|down_7|NZ_CP051128.1_3667063_3668380_+	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|311aa|down_8|NZ_CP051128.1_3668764_3669697_+	NA	NA|523aa|down_9|NZ_CP051128.1_3669915_3671484_-	COG1928, PMT1, Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
GCF_012275205.1_ASM1227520v1	NZ_CP051128	Bacillus megaterium strain S2 chromosome, complete genome	4	5045060-5045138	4	CRISPRCasFinder	no		csa3,cas14k,cas3,DEDDh,DinG	Orphan	CAAAATTTGTCCTCATGGTGTGTTCAT	27	0	0	NA	NA	NA	1	1	Orphan	csa3,cas14k,cas3,DEDDh,DinG	NA|241aa|up_9|NZ_CP051128.1_5028855_5029578_+,NA|119aa|down_4|NZ_CP051128.1_5055107_5055464_-	NA|241aa|up_9|NZ_CP051128.1_5028855_5029578_+	NA	NA|463aa|up_8|NZ_CP051128.1_5030526_5031915_-	pfam02113, Peptidase_S13, D-Ala-D-Ala carboxypeptidase 3 (S13) family	NA|425aa|up_7|NZ_CP051128.1_5032261_5033536_-	cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in  bacterial endospore germination	NA|866aa|up_6|NZ_CP051128.1_5033635_5036233_-	TIGR04075, Ser/Thr_phosphatase_family_protein, polynucleotide kinase-phosphatase	NA|448aa|up_5|NZ_CP051128.1_5036229_5037573_-	TIGR04074, Methyltransferase_type_12, 3' terminal RNA ribose 2'-O-methyltransferase Hen1	NA|858aa|up_4|NZ_CP051128.1_5037692_5040266_-	cd17913, DEXQc_Suv3, DEXQ-box helicase domain of Suv3	NA|64aa|up_3|NZ_CP051128.1_5040344_5040536_-	pfam17340, DUF5370, Family of unknown function (DUF5370)	NA|890aa|up_2|NZ_CP051128.1_5040649_5043319_-	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional	NA|272aa|up_1|NZ_CP051128.1_5043321_5044137_-	pfam03618, Kinase-PPPase, Kinase/pyrophosphorylase	NA|216aa|up_0|NZ_CP051128.1_5044154_5044802_-	cd04617, CBS_pair_CcpN, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains of CcpN repressor	NA|257aa|down_0|NZ_CP051128.1_5051754_5052525_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|251aa|down_1|NZ_CP051128.1_5052632_5053385_-	cd09087, Ape1-like_AP-endo, Human Ape1-like subfamily of the ExoIII family apurinic/apyrimidinic (AP) endonucleases	NA|267aa|down_2|NZ_CP051128.1_5053529_5054330_-	pfam04748, Polysacc_deac_2, Divergent polysaccharide deacetylase	NA|147aa|down_3|NZ_CP051128.1_5054423_5054864_-	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones]	NA|119aa|down_4|NZ_CP051128.1_5055107_5055464_-	NA	NA|354aa|down_5|NZ_CP051128.1_5055486_5056548_-	pfam10720, DUF2515, Protein of unknown function (DUF2515)	NA|622aa|down_6|NZ_CP051128.1_5056698_5058564_+	cd02892, SQCY_1, Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold	NA|169aa|down_7|NZ_CP051128.1_5058609_5059116_-	cd10028, UDG-F2_TDG_MUG, Uracil DNA glycosylase family 2, includes thymine DNA glycosylase, mismatch-specific uracil DNA glycosylase and similar proteins	NA|192aa|down_8|NZ_CP051128.1_5059188_5059764_-	pfam02588, YitT_membrane, Uncharacterized 5xTM membrane BCR, YitT family COG1284	NA|442aa|down_9|NZ_CP051128.1_5059887_5061213_-	TIGR00931, Uncharacterized_Na+/H+_antiporter_HI_1107, Na+/H+ antiporter NhaC
GCF_012275205.1_ASM1227520v1	NZ_CP051128	Bacillus megaterium strain S2 chromosome, complete genome	5	5675403-5675477	5	CRISPRCasFinder	no		csa3,cas14k,cas3,DEDDh,DinG	Orphan	GGCAAAGCTCGAAAGCTTTGCCCTC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,cas14k,cas3,DEDDh,DinG	NA,NA	NA|99aa|up_9|NZ_CP051128.1_5666737_5667034_-	pfam13797, Post_transc_reg, Post-transcriptional regulator	NA|516aa|up_8|NZ_CP051128.1_5667172_5668720_+	TIGR02900, Stage_V_sporulation_protein_B, stage V sporulation protein B	NA|220aa|up_7|NZ_CP051128.1_5668766_5669426_-	COG2323, COG2323, Predicted membrane protein [Function unknown]	NA|121aa|up_6|NZ_CP051128.1_5669690_5670053_+	TIGR04086, hypothetical_protein, putative membrane protein, TIGR04086 family	NA|98aa|up_5|NZ_CP051128.1_5670149_5670443_-	PRK05585, yajC, preprotein translocase subunit YajC; Validated	NA|380aa|up_4|NZ_CP051128.1_5670472_5671612_-	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional	NA|343aa|up_3|NZ_CP051128.1_5671639_5672668_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|335aa|up_2|NZ_CP051128.1_5672697_5673702_-	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|204aa|up_1|NZ_CP051128.1_5673712_5674324_-	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|182aa|up_0|NZ_CP051128.1_5674765_5675311_-	pfam08955, BofC_C, BofC C-terminal domain	NA|232aa|down_0|NZ_CP051128.1_5675491_5676187_-	pfam09580, Spore_YhcN_YlaJ, Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)	NA|330aa|down_1|NZ_CP051128.1_5676292_5677282_-	COG0510, ycfN, Thiamine kinase and related kinases [Coenzyme transport and metabolism]	NA|366aa|down_2|NZ_CP051128.1_5679621_5680719_-	PRK09375, PRK09375, quinolinate synthase NadA	NA|283aa|down_3|NZ_CP051128.1_5680720_5681569_-	PRK08072, PRK08072, carboxylating nicotinate-nucleotide diphosphorylase	NA|528aa|down_4|NZ_CP051128.1_5681537_5683121_-	PRK08071, PRK08071, L-aspartate oxidase; Provisional	NA|383aa|down_5|NZ_CP051128.1_5683328_5684477_+	PRK02948, PRK02948, IscS subfamily cysteine desulfurase	NA|179aa|down_6|NZ_CP051128.1_5684531_5685068_+	COG1827, COG1827, Predicted small molecule binding protein (contains 3H domain) [General function prediction only]	NA|286aa|down_7|NZ_CP051128.1_5685122_5685980_-	PRK11898, PRK11898, prephenate dehydratase; Provisional	NA|150aa|down_8|NZ_CP051128.1_5686038_5686488_-	PRK04435, PRK04435, ACT domain-containing protein	NA|431aa|down_9|NZ_CP051128.1_5686527_5687820_-	PRK12297, obgE, GTPase CgtA; Reviewed
