assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_012584495.1_ASM1258449v1	NZ_CP051430	Escherichia sp. SCLE84 chromosome, complete genome	1	517266-517389	1	CRISPRCasFinder	no	DEDDh	DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|30aa|down_7|NZ_CP051430.1_526285_526375_+	NA|471aa|up_9|NZ_CP051430.1_506719_508132_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP051430.1_508688_508898_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP051430.1_509353_509980_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP051430.1_510000_512103_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP051430.1_512115_512754_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP051430.1_512817_513486_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP051430.1_513482_514268_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP051430.1_514271_515084_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP051430.1_515095_516700_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP051430.1_516825_517131_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP051430.1_517703_518960_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP051430.1_519000_520374_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP051430.1_520588_521230_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP051430.1_521269_522418_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP051430.1_522708_523920_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP051430.1_524032_524965_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP051430.1_524961_525987_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP051430.1_526285_526375_+	NA	NA|390aa|down_8|NZ_CP051430.1_526540_527710_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP051430.1_527855_528437_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_012584495.1_ASM1258449v1	NZ_CP051430	Escherichia sp. SCLE84 chromosome, complete genome	2	1261322-1261413	2	CRISPRCasFinder	no		DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|70aa|up_9|NZ_CP051430.1_1250572_1250782_-,NA	NA|70aa|up_9|NZ_CP051430.1_1250572_1250782_-	NA	NA|1321aa|up_8|NZ_CP051430.1_1250836_1254799_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP051430.1_1254838_1255477_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP051430.1_1255764_1256856_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP051430.1_1256855_1257548_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP051430.1_1257559_1257946_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP051430.1_1257953_1258754_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP051430.1_1258763_1259354_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP051430.1_1259364_1259859_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP051430.1_1259879_1261208_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP051430.1_1261836_1262433_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP051430.1_1262453_1262681_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP051430.1_1262718_1263960_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|117aa|down_3|NZ_CP051430.1_1264252_1264603_-	PRK09784, PRK09784, YccE family protein	NA|297aa|down_4|NZ_CP051430.1_1264618_1265509_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_5|NZ_CP051430.1_1265769_1266690_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_6|NZ_CP051430.1_1266689_1266995_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_7|NZ_CP051430.1_1267087_1267687_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_8|NZ_CP051430.1_1267683_1270230_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_9|NZ_CP051430.1_1270229_1271402_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC
GCF_012584495.1_ASM1258449v1	NZ_CP051430	Escherichia sp. SCLE84 chromosome, complete genome	3	1573394-1573538	3	CRISPRCasFinder	no		DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|330aa|up_9|NZ_CP051430.1_1561292_1562282_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP051430.1_1562678_1563587_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP051430.1_1563778_1565800_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP051430.1_1566378_1567056_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP051430.1_1567048_1567804_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP051430.1_1567790_1568945_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP051430.1_1568941_1569982_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP051430.1_1570068_1571358_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP051430.1_1571416_1571893_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP051430.1_1572044_1573328_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP051430.1_1573561_1575823_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP051430.1_1576005_1577439_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP051430.1_1577514_1578567_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP051430.1_1578750_1579704_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP051430.1_1579744_1580740_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP051430.1_1580894_1581713_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP051430.1_1581713_1582772_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP051430.1_1582774_1583464_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP051430.1_1583463_1584237_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP051430.1_1584403_1584553_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_012584495.1_ASM1258449v1	NZ_CP051430	Escherichia sp. SCLE84 chromosome, complete genome	4	2392215-2392330	4	CRISPRCasFinder	no		DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	AACGCCTGATGCGACGCTGACGCGTCTTATC	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|393aa|up_9|NZ_CP051430.1_2380230_2381409_-	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter	NA|44aa|up_8|NZ_CP051430.1_2381510_2381642_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|552aa|up_7|NZ_CP051430.1_2381730_2383386_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|328aa|up_6|NZ_CP051430.1_2383549_2384533_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|NZ_CP051430.1_2384508_2386119_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|NZ_CP051430.1_2386102_2386801_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|NZ_CP051430.1_2386914_2387679_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|NZ_CP051430.1_2387764_2388643_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|NZ_CP051430.1_2388981_2390682_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|NZ_CP051430.1_2390692_2392195_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|NZ_CP051430.1_2392394_2393090_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|NZ_CP051430.1_2393164_2395516_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|NZ_CP051430.1_2395680_2398587_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|NZ_CP051430.1_2398598_2399258_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|272aa|down_4|NZ_CP051430.1_2399374_2400190_-	PRK09430, djlA, co-chaperone DjlA	NA|785aa|down_5|NZ_CP051430.1_2400444_2402799_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_6|NZ_CP051430.1_2402851_2404138_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_7|NZ_CP051430.1_2404137_2405127_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_8|NZ_CP051430.1_2405123_2405945_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|126aa|down_9|NZ_CP051430.1_2405947_2406325_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed
GCF_012584495.1_ASM1258449v1	NZ_CP051430	Escherichia sp. SCLE84 chromosome, complete genome	5	2415244-2415376	1	PILER-CR	no		DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	ATCACCAATATTGAAAA	17	0	0	NA	NA	NA	2	2	Orphan	DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|126aa|up_9|NZ_CP051430.1_2405947_2406325_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|281aa|up_8|NZ_CP051430.1_2406331_2407174_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|160aa|up_7|NZ_CP051430.1_2407251_2407731_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP051430.1_2407922_2409785_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP051430.1_2409777_2410308_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP051430.1_2410415_2411747_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP051430.1_2411805_2412093_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP051430.1_2412089_2413376_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP051430.1_2413426_2414368_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP051430.1_2414382_2415153_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP051430.1_2415626_2417141_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP051430.1_2417171_2418314_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP051430.1_2418442_2419660_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP051430.1_2419733_2421287_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP051430.1_2421395_2422181_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP051430.1_2422186_2422777_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP051430.1_2422862_2423258_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|NZ_CP051430.1_2423518_2426740_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP051430.1_2426757_2427906_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP051430.1_2428361_2429183_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
GCF_012584495.1_ASM1258449v1	NZ_CP051430	Escherichia sp. SCLE84 chromosome, complete genome	6	3866350-3866489	5	CRISPRCasFinder	no		DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TTTGTATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCA	49	0	0	NA	NA	NA	1	1	Orphan	DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|336aa|up_9|NZ_CP051430.1_3858815_3859823_-	PRK10508, PRK10508, luciferase-like monooxygenase	NA|293aa|up_8|NZ_CP051430.1_3860028_3860907_-	PRK15447, PRK15447, putative protease; Provisional	NA|332aa|up_7|NZ_CP051430.1_3860915_3861911_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|175aa|up_6|NZ_CP051430.1_3862119_3862644_+	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism]	NA|168aa|up_5|NZ_CP051430.1_3862637_3863141_+	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|101aa|up_4|NZ_CP051430.1_3863127_3863430_-	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated	NA|148aa|up_3|NZ_CP051430.1_3863480_3863924_+	PRK03467, PRK03467, hypothetical protein; Provisional	NA|173aa|up_2|NZ_CP051430.1_3863903_3864422_-	TIGR01382, Uncharacterized_protein_MJ0967, intracellular protease, PfpI family	NA|212aa|up_1|NZ_CP051430.1_3864549_3865185_+	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs	NA|347aa|up_0|NZ_CP051430.1_3865257_3866298_+	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|192aa|down_0|NZ_CP051430.1_3866502_3867078_-	PRK11023, PRK11023, divisome-associated lipoprotein YraP	NA|197aa|down_1|NZ_CP051430.1_3867087_3867678_-	PRK10886, PRK10886, DnaA initiator-associating protein DiaA; Provisional	NA|132aa|down_2|NZ_CP051430.1_3867697_3868093_-	TIGR00252, UPF0102_protein_HI_1656, TIGR00252 family protein	NA|679aa|down_3|NZ_CP051430.1_3868050_3870087_-	COG3107, LppC, Putative lipoprotein [General function prediction only]	NA|287aa|down_4|NZ_CP051430.1_3870150_3871011_+	PRK14994, PRK14994, SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional	NA|364aa|down_5|NZ_CP051430.1_3871053_3872145_-	pfam00419, Fimbrial, Fimbrial protein	NA|839aa|down_6|NZ_CP051430.1_3872155_3874672_-	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|232aa|down_7|NZ_CP051430.1_3874701_3875397_-	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|195aa|down_8|NZ_CP051430.1_3875476_3876061_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|252aa|down_9|NZ_CP051430.1_3876460_3877216_-	PRK09762, PRK09762, galactosamine-6-phosphate isomerase; Provisional
GCF_012584495.1_ASM1258449v1	NZ_CP051430	Escherichia sp. SCLE84 chromosome, complete genome	7	3911530-3911647	6	CRISPRCasFinder	no		DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	40	0	0	NA	NA	NA	1	1	Orphan	DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|55aa|down_0|NZ_CP051430.1_3911720_3911885_-	NA|115aa|up_9|NZ_CP051430.1_3899251_3899596_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|up_8|NZ_CP051430.1_3899784_3900723_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|up_7|NZ_CP051430.1_3900821_3901811_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|up_6|NZ_CP051430.1_3901832_3903164_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|up_5|NZ_CP051430.1_3903189_3904398_+	PRK12379, PRK12379, propionate kinase	NA|765aa|up_4|NZ_CP051430.1_3904431_3906726_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|up_3|NZ_CP051430.1_3906739_3907129_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|up_2|NZ_CP051430.1_3907200_3908565_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|up_1|NZ_CP051430.1_3908839_3910171_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|437aa|up_0|NZ_CP051430.1_3910198_3911509_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|55aa|down_0|NZ_CP051430.1_3911720_3911885_-	NA	NA|234aa|down_1|NZ_CP051430.1_3911907_3912609_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|299aa|down_2|NZ_CP051430.1_3912713_3913610_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|119aa|down_3|NZ_CP051430.1_3913660_3914017_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|122aa|down_4|NZ_CP051430.1_3914258_3914624_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|329aa|down_5|NZ_CP051430.1_3914916_3915903_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|161aa|down_6|NZ_CP051430.1_3915972_3916455_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|100aa|down_7|NZ_CP051430.1_3916550_3916850_-	pfam13997, YqjK, YqjK-like protein	NA|135aa|down_8|NZ_CP051430.1_3916839_3917244_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_9|NZ_CP051430.1_3917246_3917552_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]
GCF_012584495.1_ASM1258449v1	NZ_CP051430	Escherichia sp. SCLE84 chromosome, complete genome	8	4291735-4292251	2,7,1	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GAGTTCCCCGCGCCAGCGGGGATAAACC,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29	0	0	NA	NA	I-E:I-E:I-E	8,8,8	8	Orphan	DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|47aa|up_1|NZ_CP051430.1_4290444_4290585_-,NA	NA|434aa|up_9|NZ_CP051430.1_4281141_4282443_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP051430.1_4282490_4284725_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP051430.1_4284802_4285051_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP051430.1_4285050_4285386_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP051430.1_4285456_4286248_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP051430.1_4286475_4288113_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP051430.1_4288200_4289499_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP051430.1_4289558_4290431_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP051430.1_4290444_4290585_-	NA	NA|224aa|up_0|NZ_CP051430.1_4290723_4291395_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|502aa|down_0|NZ_CP051430.1_4292854_4294360_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP051430.1_4294386_4295664_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP051430.1_4295982_4296768_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP051430.1_4296837_4298292_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP051430.1_4298313_4299723_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP051430.1_4299700_4300480_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|298aa|down_6|NZ_CP051430.1_4300443_4301337_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP051430.1_4301484_4302060_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP051430.1_4302076_4302337_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP051430.1_4302327_4303599_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_012584495.1_ASM1258449v1	NZ_CP051430	Escherichia sp. SCLE84 chromosome, complete genome	9	4319407-4320351	3,8,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29	0	0	NA	NA	I-E:I-E:I-E	15,15,15	15	TypeI-E	DEDDh,c2c9_V-U4,DinG,cas3,RT,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|457aa|up_9|NZ_CP051430.1_4308925_4310295_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|51aa|up_8|NZ_CP051430.1_4310387_4310540_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP051430.1_4310733_4313433_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP051430.1_4313530_4315093_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|178aa|up_5|NZ_CP051430.1_4315089_4315623_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|358aa|up_4|NZ_CP051430.1_4315637_4316711_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP051430.1_4316721_4317468_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP051430.1_4317449_4318100_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|307aa|up_1|NZ_CP051430.1_4318096_4319017_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP051430.1_4319016_4319310_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP051430.1_4320432_4321470_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP051430.1_4321721_4322630_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP051430.1_4322631_4324059_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP051430.1_4324058_4324664_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP051430.1_4324713_4325037_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP051430.1_4325230_4325542_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP051430.1_4325560_4326271_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP051430.1_4326270_4326750_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP051430.1_4326746_4327796_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP051430.1_4327776_4328538_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
