assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_012647205.1_ASM1264720v1	NZ_CP051487	Pseudomonas umsongensis strain CY-1 chromosome, complete genome	1	2008996-2009106	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,PD-DExK	Orphan	TTGGCAAGAGTGAAGCTTATCAGCAGA	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,PD-DExK	NA|274aa|up_9|NZ_CP051487.1_1994112_1994934_-,NA	NA|274aa|up_9|NZ_CP051487.1_1994112_1994934_-	NA	NA|581aa|up_8|NZ_CP051487.1_1995822_1997565_+	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]	NA|443aa|up_7|NZ_CP051487.1_1997578_1998907_+	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|466aa|up_6|NZ_CP051487.1_1998903_2000301_+	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|481aa|up_5|NZ_CP051487.1_2000651_2002094_+	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA|454aa|up_4|NZ_CP051487.1_2002219_2003581_+	PRK15414, PRK15414, phosphomannomutase	NA|198aa|up_3|NZ_CP051487.1_2003763_2004357_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|455aa|up_2|NZ_CP051487.1_2004353_2005718_+	COG4529, COG4529, Uncharacterized protein conserved in bacteria [Function unknown]	NA|266aa|up_1|NZ_CP051487.1_2005811_2006609_+	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|417aa|up_0|NZ_CP051487.1_2006605_2007856_+	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system	NA|999aa|down_0|NZ_CP051487.1_2009683_2012680_+	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins	NA|299aa|down_1|NZ_CP051487.1_2012682_2013579_+	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs	NA|389aa|down_2|NZ_CP051487.1_2013589_2014756_+	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|345aa|down_3|NZ_CP051487.1_2014787_2015822_+	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]	NA|381aa|down_4|NZ_CP051487.1_2015872_2017015_+	cd03809, GT4_MtfB-like, glycosyltransferases MtfB, WbpX, and similar proteins	NA|376aa|down_5|NZ_CP051487.1_2017014_2018142_+	cd03795, GT4_WfcD-like, Escherichia coli alpha-1,3-mannosyltransferase WfcD and similar proteins	NA|112aa|down_6|NZ_CP051487.1_2018263_2018599_+	pfam12836, HHH_3, Helix-hairpin-helix motif	NA|265aa|down_7|NZ_CP051487.1_2018809_2019604_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|425aa|down_8|NZ_CP051487.1_2019635_2020910_+	PRK06333, PRK06333, beta-ketoacyl-ACP synthase	NA|186aa|down_9|NZ_CP051487.1_2020906_2021464_-	COG1309, AcrR, Transcriptional regulator [Transcription]
GCF_012647205.1_ASM1264720v1	NZ_CP051487	Pseudomonas umsongensis strain CY-1 chromosome, complete genome	2	2266869-2266999	2	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,PD-DExK	Type I-A	GGCAACGACATCCTCAACGGCGG	23	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,DinG,csa3,PD-DExK	NA,NA	NA|141aa|up_9|NZ_CP051487.1_2244542_2244965_-	pfam12680, SnoaL_2, SnoaL-like domain	NA|364aa|up_8|NZ_CP051487.1_2245264_2246356_+	TIGR03405, iron-containing_alcohol_dehydrogenase, phosphonate metabolism-associated iron-containing alcohol dehydrogenase	NA|432aa|up_7|NZ_CP051487.1_2246540_2247836_+	cd17312, MFS_OPA_SLC37, Organophosphate:Pi antiporter/Solute Carrier family 37 of the Major Facilitator Superfamily of transporters	NA|291aa|up_6|NZ_CP051487.1_2247890_2248763_+	TIGR03339, phn_lysR, aminoethylphosphonate catabolism associated LysR family transcriptional regulator	NA|276aa|up_5|NZ_CP051487.1_2248849_2249677_+	PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional	NA|315aa|up_4|NZ_CP051487.1_2249748_2250693_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|300aa|up_3|NZ_CP051487.1_2250818_2251718_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|443aa|up_2|NZ_CP051487.1_2251950_2253279_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|447aa|up_1|NZ_CP051487.1_2253280_2254621_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|579aa|up_0|NZ_CP051487.1_2254627_2256364_-	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]	NA|936aa|down_0|NZ_CP051487.1_2268689_2271497_+	cd13866, CuRO_2_BOD, The second cupredoxin domain of Bilirubin oxidase (BOD)	NA|403aa|down_1|NZ_CP051487.1_2271732_2272941_+	cd17370, MFS_MJ1317_like, MJ1317 and similar transporters of the Major Facilitator Superfamily	NA|499aa|down_2|NZ_CP051487.1_2273275_2274772_+	COG5361, COG5361, Uncharacterized conserved protein [Function unknown]	NA|183aa|down_3|NZ_CP051487.1_2275304_2275853_+	COG3038, CybB, Cytochrome B561 [Energy production and conversion]	csa3|117aa|down_4|NZ_CP051487.1_2276085_2276436_+	COG0640, ArsR, Predicted transcriptional regulators [Transcription]	NA|357aa|down_5|NZ_CP051487.1_2276474_2277545_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|406aa|down_6|NZ_CP051487.1_2277597_2278815_-	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters	NA|166aa|down_7|NZ_CP051487.1_2278938_2279436_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|168aa|down_8|NZ_CP051487.1_2279500_2280004_+	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]	NA|452aa|down_9|NZ_CP051487.1_2280018_2281374_+	pfam13738, Pyr_redox_3, Pyridine nucleotide-disulphide oxidoreductase
GCF_012647205.1_ASM1264720v1	NZ_CP051487	Pseudomonas umsongensis strain CY-1 chromosome, complete genome	3	2704180-2704277	3	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,PD-DExK	Orphan	AACTGTGGGAGCTGGCCTGCCAGCGA	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,PD-DExK	NA|183aa|up_8|NZ_CP051487.1_2698088_2698637_+,NA|173aa|up_7|NZ_CP051487.1_2698636_2699155_+,NA|449aa|down_4|NZ_CP051487.1_2711711_2713058_-	NA|182aa|up_9|NZ_CP051487.1_2697556_2698102_+	COG3166, PilN, Tfp pilus assembly protein PilN [Cell motility and secretion / Intracellular trafficking and secretion]	NA|183aa|up_8|NZ_CP051487.1_2698088_2698637_+	NA	NA|173aa|up_7|NZ_CP051487.1_2698636_2699155_+	NA	NA|611aa|up_6|NZ_CP051487.1_2699151_2700984_+	COG4796, HofQ, Type II secretory pathway, component HofQ [Intracellular trafficking and secretion]	NA|158aa|up_5|NZ_CP051487.1_2700986_2701460_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|125aa|up_4|NZ_CP051487.1_2701464_2701839_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|180aa|up_3|NZ_CP051487.1_2701813_2702353_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|130aa|up_2|NZ_CP051487.1_2702349_2702739_+	PRK10386, PRK10386, curli production assembly/transport protein CsgE	NA|140aa|up_1|NZ_CP051487.1_2702735_2703155_+	PRK10050, PRK10050, curli production assembly/transport protein CsgF	NA|291aa|up_0|NZ_CP051487.1_2703185_2704058_+	PRK15184, PRK15184, curli production assembly/transport protein CsgG; Provisional	NA|517aa|down_0|NZ_CP051487.1_2705432_2706982_-	pfam00665, rve, Integrase core domain	NA|485aa|down_1|NZ_CP051487.1_2707419_2708874_-	PRK10101, csgB, curlin minor subunit CsgB; Provisional	NA|154aa|down_2|NZ_CP051487.1_2708901_2709363_-	PRK10101, csgB, curlin minor subunit CsgB; Provisional	NA|751aa|down_3|NZ_CP051487.1_2709423_2711676_-	pfam17803, Cadherin_4, Bacterial cadherin-like domain	NA|449aa|down_4|NZ_CP051487.1_2711711_2713058_-	NA	NA|483aa|down_5|NZ_CP051487.1_2713347_2714796_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|936aa|down_6|NZ_CP051487.1_2714982_2717790_+	cd13866, CuRO_2_BOD, The second cupredoxin domain of Bilirubin oxidase (BOD)	NA|372aa|down_7|NZ_CP051487.1_2717786_2718902_+	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold	NA|498aa|down_8|NZ_CP051487.1_2719003_2720497_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|477aa|down_9|NZ_CP051487.1_2720465_2721896_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
GCF_012647205.1_ASM1264720v1	NZ_CP051487	Pseudomonas umsongensis strain CY-1 chromosome, complete genome	4	2707168-2707262	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,PD-DExK	Orphan	GCCAGCTCCTACAGTAGATCGGGTA	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,PD-DExK	NA|183aa|up_9|NZ_CP051487.1_2698088_2698637_+,NA|173aa|up_8|NZ_CP051487.1_2698636_2699155_+,NA|449aa|down_3|NZ_CP051487.1_2711711_2713058_-,NA|127aa|down_9|NZ_CP051487.1_2721926_2722307_-	NA|183aa|up_9|NZ_CP051487.1_2698088_2698637_+	NA	NA|173aa|up_8|NZ_CP051487.1_2698636_2699155_+	NA	NA|611aa|up_7|NZ_CP051487.1_2699151_2700984_+	COG4796, HofQ, Type II secretory pathway, component HofQ [Intracellular trafficking and secretion]	NA|158aa|up_6|NZ_CP051487.1_2700986_2701460_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|125aa|up_5|NZ_CP051487.1_2701464_2701839_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|180aa|up_4|NZ_CP051487.1_2701813_2702353_+	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion]	NA|130aa|up_3|NZ_CP051487.1_2702349_2702739_+	PRK10386, PRK10386, curli production assembly/transport protein CsgE	NA|140aa|up_2|NZ_CP051487.1_2702735_2703155_+	PRK10050, PRK10050, curli production assembly/transport protein CsgF	NA|291aa|up_1|NZ_CP051487.1_2703185_2704058_+	PRK15184, PRK15184, curli production assembly/transport protein CsgG; Provisional	NA|517aa|up_0|NZ_CP051487.1_2705432_2706982_-	pfam00665, rve, Integrase core domain	NA|485aa|down_0|NZ_CP051487.1_2707419_2708874_-	PRK10101, csgB, curlin minor subunit CsgB; Provisional	NA|154aa|down_1|NZ_CP051487.1_2708901_2709363_-	PRK10101, csgB, curlin minor subunit CsgB; Provisional	NA|751aa|down_2|NZ_CP051487.1_2709423_2711676_-	pfam17803, Cadherin_4, Bacterial cadherin-like domain	NA|449aa|down_3|NZ_CP051487.1_2711711_2713058_-	NA	NA|483aa|down_4|NZ_CP051487.1_2713347_2714796_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|936aa|down_5|NZ_CP051487.1_2714982_2717790_+	cd13866, CuRO_2_BOD, The second cupredoxin domain of Bilirubin oxidase (BOD)	NA|372aa|down_6|NZ_CP051487.1_2717786_2718902_+	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold	NA|498aa|down_7|NZ_CP051487.1_2719003_2720497_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|477aa|down_8|NZ_CP051487.1_2720465_2721896_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|127aa|down_9|NZ_CP051487.1_2721926_2722307_-	NA
GCF_012647205.1_ASM1264720v1	NZ_CP051487	Pseudomonas umsongensis strain CY-1 chromosome, complete genome	5	2783300-2783457	5	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,PD-DExK	Orphan	AACGGATATGTACACCTGAAAGACAATCACCGTCTGCCAGAACGCCTTCGCC	52	1	2	2783352-2783405|2783352-2783405	NZ_CP051487.1_2374796-2374743|NZ_CP051487.1_3553188-3553241	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,PD-DExK	NA|85aa|up_6|NZ_CP051487.1_2774795_2775050_+,NA	NA|437aa|up_9|NZ_CP051487.1_2772146_2773457_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|247aa|up_8|NZ_CP051487.1_2773453_2774194_-	PRK09468, ompR, osmolarity response regulator; Provisional	NA|88aa|up_7|NZ_CP051487.1_2774488_2774752_+	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|85aa|up_6|NZ_CP051487.1_2774795_2775050_+	NA	NA|405aa|up_5|NZ_CP051487.1_2775206_2776421_+	cd03012, TlpA_like_DipZ_like, TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain	NA|329aa|up_4|NZ_CP051487.1_2776506_2777493_-	pfam12852, Cupin_6, Cupin	NA|90aa|up_3|NZ_CP051487.1_2777669_2777939_+	pfam14026, DUF4242, Protein of unknown function (DUF4242)	NA|271aa|up_2|NZ_CP051487.1_2777978_2778791_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|309aa|up_1|NZ_CP051487.1_2778841_2779768_-	PRK11175, PRK11175, universal stress protein UspE; Provisional	NA|517aa|up_0|NZ_CP051487.1_2781544_2783094_-	pfam00665, rve, Integrase core domain	NA|316aa|down_0|NZ_CP051487.1_2783778_2784726_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|129aa|down_1|NZ_CP051487.1_2784784_2785171_-	COG3189, COG3189, Uncharacterized conserved protein [Function unknown]	NA|241aa|down_2|NZ_CP051487.1_2785175_2785898_-	COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism]	NA|248aa|down_3|NZ_CP051487.1_2786146_2786890_+	pfam04391, DUF533, Protein of unknown function (DUF533)	NA|148aa|down_4|NZ_CP051487.1_2787006_2787450_-	cd02215, cupin_QDO_N_C, quercetinase, N- and C-terminal cupin domains	NA|866aa|down_5|NZ_CP051487.1_2787635_2790233_+	PRK05972, ligD, ATP-dependent DNA ligase; Reviewed	NA|225aa|down_6|NZ_CP051487.1_2790317_2790992_-	pfam11769, DUF3313, Protein of unknown function (DUF3313)	NA|423aa|down_7|NZ_CP051487.1_2791038_2792307_-	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX)	NA|93aa|down_8|NZ_CP051487.1_2792574_2792853_-	pfam11746, DUF3303, Protein of unknown function (DUF3303)	NA|134aa|down_9|NZ_CP051487.1_2793067_2793469_-	PTZ00268, PTZ00268, glycosylphosphatidylinositol-specific phospholipase C; Provisional
GCF_012647205.1_ASM1264720v1	NZ_CP051487	Pseudomonas umsongensis strain CY-1 chromosome, complete genome	6	3053738-3053850	6	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,PD-DExK	Orphan	CGCGAAGAACGATGACGCGGTGCAACAGGTACACCGCGGCG	41	1	1	3053779-3053809	NZ_CP051487.1_2893706-2893676	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,PD-DExK	NA,NA|108aa|down_8|NZ_CP051487.1_3066216_3066540_-	NA|222aa|up_9|NZ_CP051487.1_3044200_3044866_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|593aa|up_8|NZ_CP051487.1_3044858_3046637_-	pfam04412, DUF521, Protein of unknown function (DUF521)	NA|273aa|up_7|NZ_CP051487.1_3046647_3047466_-	cd13696, PBP2_Atu4678_like, The substrate binding domain of putative amino acid transporter; the type 2 periplasmic binding protein fold	NA|250aa|up_6|NZ_CP051487.1_3047694_3048444_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|419aa|up_5|NZ_CP051487.1_3048518_3049775_-	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]	NA|79aa|up_4|NZ_CP051487.1_3049771_3050008_-	pfam13510, Fer2_4, 2Fe-2S iron-sulfur cluster binding domain	NA|372aa|up_3|NZ_CP051487.1_3050000_3051116_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|311aa|up_2|NZ_CP051487.1_3051112_3052045_-	PRK13970, PRK13970, 4-hydroxyproline epimerase	NA|224aa|up_1|NZ_CP051487.1_3052159_3052831_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|153aa|up_0|NZ_CP051487.1_3053141_3053600_-	pfam01797, Y1_Tnp, Transposase IS200 like	NA|580aa|down_0|NZ_CP051487.1_3053940_3055680_-	PRK06156, PRK06156, dipeptidase	NA|648aa|down_1|NZ_CP051487.1_3055868_3057812_-	PRK07726, PRK07726, DNA topoisomerase 3	NA|123aa|down_2|NZ_CP051487.1_3058068_3058437_+	pfam04248, NTP_transf_9, Domain of unknown function (DUF427)	NA|541aa|down_3|NZ_CP051487.1_3058537_3060160_-	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|549aa|down_4|NZ_CP051487.1_3060376_3062023_-	PRK02106, PRK02106, choline dehydrogenase; Validated	NA|301aa|down_5|NZ_CP051487.1_3062143_3063046_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|364aa|down_6|NZ_CP051487.1_3063153_3064245_-	COG4335, COG4335, DNA alkylation repair enzyme [DNA replication, recombination, and repair]	NA|603aa|down_7|NZ_CP051487.1_3064302_3066111_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|108aa|down_8|NZ_CP051487.1_3066216_3066540_-	NA	NA|352aa|down_9|NZ_CP051487.1_3066536_3067592_-	cd09597, M4_TLP, Peptidase M4 family including thermolysin, protealysin, aureolysin, and neutral protease
GCF_012647205.1_ASM1264720v1	NZ_CP051487	Pseudomonas umsongensis strain CY-1 chromosome, complete genome	7	3551241-3551311	7	CRISPRCasFinder	no	DinG	cas3,DEDDh,DinG,csa3,PD-DExK	Type IV-A	TTCCTGCGGTAACGGCCGCTTAT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,PD-DExK	NA|48aa|up_9|NZ_CP051487.1_3540722_3540866_-,NA	NA|48aa|up_9|NZ_CP051487.1_3540722_3540866_-	NA	NA|236aa|up_8|NZ_CP051487.1_3540864_3541572_+	COG3448, COG3448, CBS-domain-containing membrane protein [Signal transduction mechanisms]	NA|369aa|up_7|NZ_CP051487.1_3541719_3542826_+	pfam16113, ECH_2, Enoyl-CoA hydratase/isomerase	NA|384aa|up_6|NZ_CP051487.1_3542829_3543981_+	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|258aa|up_5|NZ_CP051487.1_3544086_3544860_-	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|376aa|up_4|NZ_CP051487.1_3544928_3546056_-	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases	NA|398aa|up_3|NZ_CP051487.1_3546189_3547383_-	PRK06954, PRK06954, acetyl-CoA C-acetyltransferase	NA|254aa|up_2|NZ_CP051487.1_3547395_3548157_-	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs	NA|555aa|up_1|NZ_CP051487.1_3548173_3549838_-	cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS)	NA|339aa|up_0|NZ_CP051487.1_3550084_3551101_-	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|286aa|down_0|NZ_CP051487.1_3553359_3554217_+	cd05355, SDR_c1, classical (c) SDR, subgroup 1	NA|450aa|down_1|NZ_CP051487.1_3554343_3555693_+	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism]	NA|159aa|down_2|NZ_CP051487.1_3555896_3556373_+	pfam01814, Hemerythrin, Hemerythrin HHE cation binding domain	NA|636aa|down_3|NZ_CP051487.1_3556520_3558428_-	PRK13557, PRK13557, histidine kinase; Provisional	DinG|771aa|down_4|NZ_CP051487.1_3558435_3560748_-	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|556aa|down_5|NZ_CP051487.1_3560744_3562412_-	pfam08774, VRR_NUC, VRR-NUC domain	NA|75aa|down_6|NZ_CP051487.1_3562608_3562833_+	NF033216, lipo_YgdI_YgdR, YgdI/YgdR family lipoprotein	NA|220aa|down_7|NZ_CP051487.1_3562930_3563590_+	pfam09864, MliC, Membrane-bound lysozyme-inhibitor of c-type lysozyme	NA|469aa|down_8|NZ_CP051487.1_3563616_3565023_-	TIGR03329, Phn_aa_oxid, putative aminophosphonate oxidoreductase	NA|272aa|down_9|NZ_CP051487.1_3565073_3565889_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]
GCF_012647205.1_ASM1264720v1	NZ_CP051487	Pseudomonas umsongensis strain CY-1 chromosome, complete genome	8	4116963-4117069	8	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,PD-DExK	Orphan	GCCAGCTCCCACAGTAGATCGAGTACATTCGTCAGCG	37	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,PD-DExK	NA,NA|52aa|down_3|NZ_CP051487.1_4121229_4121385_+	NA|308aa|up_9|NZ_CP051487.1_4104342_4105266_-	pfam04393, DUF535, Protein of unknown function (DUF535)	NA|326aa|up_8|NZ_CP051487.1_4105273_4106251_-	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|175aa|up_7|NZ_CP051487.1_4106256_4106781_-	COG1045, CysE, Serine acetyltransferase [Amino acid transport and metabolism]	NA|319aa|up_6|NZ_CP051487.1_4106789_4107746_-	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function	NA|206aa|up_5|NZ_CP051487.1_4107738_4108356_-	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|489aa|up_4|NZ_CP051487.1_4108467_4109934_-	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|464aa|up_3|NZ_CP051487.1_4110196_4111588_-	cd13127, MATE_tuaB_like, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins	NA|509aa|up_2|NZ_CP051487.1_4111691_4113218_+	pfam04932, Wzy_C, O-Antigen ligase	NA|877aa|up_1|NZ_CP051487.1_4113223_4115854_+	COG2730, BglC, Endoglucanase [Carbohydrate transport and metabolism]	NA|326aa|up_0|NZ_CP051487.1_4115925_4116903_+	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]	NA|469aa|down_0|NZ_CP051487.1_4117657_4119064_-	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|162aa|down_1|NZ_CP051487.1_4119387_4119873_+	smart00903, Flavin_Reduct, Flavin reductase like domain	NA|348aa|down_2|NZ_CP051487.1_4120053_4121097_+	pfam00296, Bac_luciferase, Luciferase-like monooxygenase	NA|52aa|down_3|NZ_CP051487.1_4121229_4121385_+	NA	NA|226aa|down_4|NZ_CP051487.1_4121477_4122155_+	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle	NA|454aa|down_5|NZ_CP051487.1_4122160_4123522_+	COG1457, CodB, Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]	NA|302aa|down_6|NZ_CP051487.1_4123744_4124650_+	PRK14194, PRK14194, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|442aa|down_7|NZ_CP051487.1_4124767_4126093_-	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism]	NA|441aa|down_8|NZ_CP051487.1_4126219_4127542_-	cd02808, GltS_FMN, Glutamate synthase (GltS) FMN-binding domain	NA|228aa|down_9|NZ_CP051487.1_4127562_4128246_-	COG0070, GltB, Glutamate synthase domain 3 [Amino acid transport and metabolism]
GCF_012647205.1_ASM1264720v1	NZ_CP051487	Pseudomonas umsongensis strain CY-1 chromosome, complete genome	9	4431863-4431940	9	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,PD-DExK	Orphan	GCTGAAGGTGGCGCCGATCGCCTG	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,PD-DExK	NA|87aa|up_6|NZ_CP051487.1_4426102_4426363_+,NA	NA|218aa|up_9|NZ_CP051487.1_4423567_4424221_+	COG4566, TtrR, Response regulator [Signal transduction mechanisms]	NA|125aa|up_8|NZ_CP051487.1_4424319_4424694_+	cd17537, REC_FixJ, phosphoacceptor receiver (REC) domain of FixJ family response regulators	NA|401aa|up_7|NZ_CP051487.1_4424847_4426050_+	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|87aa|up_6|NZ_CP051487.1_4426102_4426363_+	NA	NA|328aa|up_5|NZ_CP051487.1_4426883_4427867_+	pfam01032, FecCD, FecCD transport family	NA|256aa|up_4|NZ_CP051487.1_4427866_4428634_+	PRK13548, hmuV, hemin importer ATP-binding subunit; Provisional	NA|295aa|up_3|NZ_CP051487.1_4428660_4429545_+	COG3016, PhuW, Uncharacterized iron-regulated protein [Function unknown]	NA|130aa|up_2|NZ_CP051487.1_4429665_4430055_-	COG3474, COG3474, Cytochrome c2 [Energy production and conversion]	NA|250aa|up_1|NZ_CP051487.1_4430262_4431012_+	COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|135aa|up_0|NZ_CP051487.1_4431067_4431472_+	cd02234, cupin_BLR7677-like, Bradyrhizobium japonicum BLR7677 and related proteins, cupin domain	NA|277aa|down_0|NZ_CP051487.1_4432330_4433161_-	PRK06180, PRK06180, short chain dehydrogenase; Provisional	NA|302aa|down_1|NZ_CP051487.1_4433291_4434197_+	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|106aa|down_2|NZ_CP051487.1_4434529_4434847_+	pfam07978, NIPSNAP, NIPSNAP	NA|153aa|down_3|NZ_CP051487.1_4434848_4435307_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|563aa|down_4|NZ_CP051487.1_4435466_4437155_-	PRK02106, PRK02106, choline dehydrogenase; Validated	NA|525aa|down_5|NZ_CP051487.1_4437172_4438747_-	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|504aa|down_6|NZ_CP051487.1_4438929_4440441_-	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins	NA|333aa|down_7|NZ_CP051487.1_4440512_4441511_-	cd11589, Agmatinase_like_1, Agmatinase and related proteins	NA|305aa|down_8|NZ_CP051487.1_4441663_4442578_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|503aa|down_9|NZ_CP051487.1_4442647_4444156_+	COG3283, TyrR, Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism]
GCF_012647205.1_ASM1264720v1	NZ_CP051487	Pseudomonas umsongensis strain CY-1 chromosome, complete genome	10	4613827-4613927	10	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,PD-DExK	Orphan	GTGACTGATACACCGCGGCGCCTGGTTCGC	30	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,PD-DExK	NA,NA	NA|536aa|up_9|NZ_CP051487.1_4600947_4602555_-	pfam06980, DUF1302, Protein of unknown function (DUF1302)	NA|539aa|up_8|NZ_CP051487.1_4602689_4604306_-	PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated	NA|341aa|up_7|NZ_CP051487.1_4604337_4605360_-	cd06214, PA_degradation_oxidoreductase_like, NAD(P) binding domain of ferredoxin reductase like phenylacetic acid (PA) degradation oxidoreductase	NA|396aa|up_6|NZ_CP051487.1_4605438_4606626_-	cd01159, NcnH, Naphthocyclinone hydroxylase	NA|258aa|up_5|NZ_CP051487.1_4607635_4608409_+	PRK07814, PRK07814, SDR family oxidoreductase	NA|264aa|up_4|NZ_CP051487.1_4608482_4609274_+	TIGR03220, 2-hydroxypenta-24-dienoate_hydratase, 2-oxopent-4-enoate hydratase	NA|306aa|up_3|NZ_CP051487.1_4609306_4610224_+	PRK08300, PRK08300, acetaldehyde dehydrogenase; Validated	NA|343aa|up_2|NZ_CP051487.1_4610234_4611263_+	PRK08195, PRK08195, 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated	NA|278aa|up_1|NZ_CP051487.1_4612099_4612933_-	cd05233, SDR_c, classical (c) SDRs	NA|256aa|up_0|NZ_CP051487.1_4612944_4613712_-	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs	NA|412aa|down_0|NZ_CP051487.1_4613958_4615194_-	COG2771, CsgD, DNA-binding HTH domain-containing proteins [Transcription]	NA|811aa|down_1|NZ_CP051487.1_4615340_4617773_-	COG1033, COG1033, Predicted exporters of the RND superfamily [General function prediction only]	NA|329aa|down_2|NZ_CP051487.1_4617787_4618774_-	COG4447, COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor [General function prediction only]	NA|317aa|down_3|NZ_CP051487.1_4619359_4620310_-	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit	NA|404aa|down_4|NZ_CP051487.1_4620314_4621526_-	cd00829, SCP-x_thiolase, Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2  has multiple roles in intracellular lipid circulation and metabolism	NA|545aa|down_5|NZ_CP051487.1_4621619_4623254_-	pfam06980, DUF1302, Protein of unknown function (DUF1302)	NA|362aa|down_6|NZ_CP051487.1_4623354_4624440_-	smart00849, Lactamase_B, Metallo-beta-lactamase superfamily	NA|618aa|down_7|NZ_CP051487.1_4624432_4626286_-	PRK08279, PRK08279, long-chain-acyl-CoA synthetase; Validated	NA|362aa|down_8|NZ_CP051487.1_4626282_4627368_-	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain	NA|443aa|down_9|NZ_CP051487.1_4627886_4629215_+	cd17328, MFS_spinster_like, Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters
