The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP051685	Duganella sp. GN2-R2 chromosome, complete genome	6230599	996211	1008472	6230599	tRNA	Moumouvirus(16.67%)	9	NA	NA
WP_169434243.1|996211_998893_-	DNA topoisomerase III	NA	A0A2P1ELA0	Moumouvirus	25.5	3.1e-22
WP_169434244.1|999160_999625_-	DUF494 family protein	NA	NA	NA	NA	NA
WP_169434245.1|999721_1001074_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	41.9	3.8e-29
WP_169434246.1|1001081_1002230_-	LysM peptidoglycan-binding domain-containing protein	NA	G3MBQ1	Bacillus_virus	57.8	4.0e-11
WP_169434247.1|1002216_1002363_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169434248.1|1002535_1003075_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	41.1	2.4e-19
WP_169434249.1|1003089_1004040_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	42.9	2.4e-09
WP_169434250.1|1004135_1004369_-	BrnA antitoxin family protein	NA	NA	NA	NA	NA
WP_169434251.1|1004707_1008472_+	methionine synthase	NA	A0A140XBC7	Dickeya_phage	56.2	8.5e-10
>prophage 3
NZ_CP051685	Duganella sp. GN2-R2 chromosome, complete genome	6230599	1842503	1914412	6230599	plate,tRNA,transposase,integrase	Tupanvirus(28.57%)	55	1840250:1840268	1923074:1923092
1840250:1840268	attL	CGCCAGCAGCGCGCGCGCA	NA	NA	NA	NA
WP_169434925.1|1842503_1844441_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_169434926.1|1845234_1846005_-	TSUP family transporter	NA	NA	NA	NA	NA
WP_169434927.1|1846110_1846956_-	alpha/beta fold hydrolase	NA	A0A2K9L3Q7	Tupanvirus	35.6	3.2e-05
WP_169434928.1|1846985_1847987_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_169434929.1|1848012_1848897_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_170205330.1|1848913_1850119_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_169434930.1|1850183_1850948_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA	NA
WP_169434931.1|1850944_1851739_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	25.1	6.0e-14
WP_169434932.1|1851773_1853429_-	GMC family oxidoreductase N-terminal domain-containing protein	NA	A0A1V0S9J5	Catovirus	29.0	5.7e-51
WP_169434933.1|1854639_1855212_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169434934.1|1855327_1856125_+	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
WP_169434935.1|1856094_1857210_-	alanine dehydrogenase	NA	NA	NA	NA	NA
WP_169434936.1|1857350_1861007_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_169434937.1|1861005_1861149_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169434938.1|1861253_1861709_+	Lrp/AsnC ligand binding domain-containing protein	NA	NA	NA	NA	NA
WP_169434939.1|1861826_1862807_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_169434940.1|1862959_1863259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_170205331.1|1864127_1864718_-	chalcone isomerase family protein	NA	NA	NA	NA	NA
WP_169434941.1|1864920_1865508_-	DUF1003 domain-containing protein	NA	NA	NA	NA	NA
WP_169434942.1|1865636_1865894_-	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	52.8	2.4e-17
WP_169434943.1|1865923_1866424_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	44.7	1.1e-29
WP_169434944.1|1866558_1867197_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_169434945.1|1867361_1868255_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169434946.1|1868291_1869671_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	A0A2K9L821	Tupanvirus	32.6	1.6e-27
WP_169434947.1|1869881_1870361_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_169434948.1|1870556_1872386_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	49.2	1.1e-156
WP_169434949.1|1872843_1873821_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_169434950.1|1873874_1876406_+	S8 family serine peptidase	NA	NA	NA	NA	NA
WP_169434951.1|1876534_1878070_-	TniQ family protein	NA	NA	NA	NA	NA
WP_169434952.1|1878109_1879552_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_169434953.1|1879544_1880801_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_169434954.1|1880794_1881718_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169434955.1|1881719_1882568_-	TnsA endonuclease N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_169434956.1|1882887_1883343_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169434957.1|1883398_1884388_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_169434958.1|1884384_1885467_-	TniQ family protein	NA	NA	NA	NA	NA
WP_169434959.1|1885704_1887285_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169434960.1|1887480_1888515_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_169434961.1|1889722_1891276_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169434962.1|1891236_1892454_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169434963.1|1892648_1893107_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169434964.1|1893204_1894185_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_169434965.1|1894436_1898891_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_169434966.1|1899373_1900525_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_169434967.1|1901026_1901512_+	hypothetical protein	NA	NA	NA	NA	NA
WP_169434968.1|1901670_1901976_-	hypothetical protein	NA	NA	NA	NA	NA
WP_169434969.1|1902120_1903008_-	peptidase	NA	NA	NA	NA	NA
WP_169434970.1|1903017_1903854_-	transglutaminase family protein	NA	NA	NA	NA	NA
WP_170205332.1|1903855_1904809_-	alpha-E domain-containing protein	NA	NA	NA	NA	NA
WP_169434971.1|1904808_1906221_-	circularly permuted type 2 ATP-grasp protein	NA	NA	NA	NA	NA
WP_169434972.1|1906658_1908893_+	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_169434973.1|1909073_1910786_-	tyrosinase family protein	NA	NA	NA	NA	NA
WP_169434974.1|1911003_1912101_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_169434975.1|1912064_1913906_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_169434976.1|1913908_1914412_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
1923074:1923092	attR	TGCGCGCGCGCTGCTGGCG	NA	NA	NA	NA
>prophage 4
NZ_CP051685	Duganella sp. GN2-R2 chromosome, complete genome	6230599	2800348	2809759	6230599	tRNA,integrase	Burkholderia_virus(16.67%)	8	2794619:2794637	2805033:2805051
2794619:2794637	attL	CCTGCAGCCGTTCGCCGGC	NA	NA	NA	NA
WP_170202710.1|2800348_2801599_-|integrase	tyrosine-type recombinase/integrase	integrase	Q6J1Q2	Burkholderia_virus	56.8	2.2e-127
WP_170202711.1|2801982_2803020_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	54.0	8.1e-96
WP_170202712.1|2803186_2804248_-	3-deoxy-7-phosphoheptulonate synthase	NA	S4W5F1	Pandoravirus	47.1	1.2e-81
WP_170202713.1|2804415_2805417_+	DNA-binding protein YbiB	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	31.1	2.0e-22
2805033:2805051	attR	CCTGCAGCCGTTCGCCGGC	NA	NA	NA	NA
WP_170202714.1|2805668_2806880_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005665410.1|2807018_2807231_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_170202715.1|2807362_2807812_+	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	45.2	1.0e-23
WP_170202716.1|2807956_2809759_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	37.7	3.9e-69
>prophage 5
NZ_CP051685	Duganella sp. GN2-R2 chromosome, complete genome	6230599	3593171	3605593	6230599		Bacillus_phage(28.57%)	9	NA	NA
WP_170203274.1|3593171_3595253_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	29.7	3.8e-76
WP_170203275.1|3595362_3595968_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA	NA
WP_170203276.1|3595976_3597230_+	hypothetical protein	NA	NA	NA	NA	NA
WP_170203277.1|3597360_3598098_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	54.9	1.3e-63
WP_170203278.1|3598139_3598991_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	47.1	2.8e-33
WP_170203279.1|3599025_3600015_+	peptidoglycan DD-metalloendopeptidase family protein	NA	Q9AZ52	Lactococcus_phage	48.4	8.2e-05
WP_170203280.1|3600024_3601053_+	RNA polymerase sigma factor RpoS	NA	A0A2I7SAT0	Vibrio_phage	36.6	3.9e-34
WP_170203281.1|3601315_3602722_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.7	1.1e-26
WP_170203282.1|3602932_3605593_-	GAF domain-containing protein	NA	W8CYF6	Bacillus_phage	29.5	4.5e-21
>prophage 6
NZ_CP051685	Duganella sp. GN2-R2 chromosome, complete genome	6230599	3747071	3756656	6230599		Bacillus_phage(33.33%)	7	NA	NA
WP_170203399.1|3747071_3748331_-	histidine kinase	NA	Q9EYF3	Enterobacteria_phage	26.2	9.5e-14
WP_170205478.1|3748599_3750063_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	27.4	4.6e-20
WP_170203400.1|3750136_3750784_-	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	43.5	7.2e-42
WP_170203401.1|3750968_3753317_+	PAS domain S-box protein	NA	A0A1V0SGX0	Hokovirus	33.5	1.3e-21
WP_170203402.1|3753435_3755589_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_170203403.1|3755684_3756068_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.6	1.1e-13
WP_170203404.1|3756233_3756656_+	DUF1810 domain-containing protein	NA	A0A2H4UVK5	Bodo_saltans_virus	39.4	5.8e-08
>prophage 7
NZ_CP051685	Duganella sp. GN2-R2 chromosome, complete genome	6230599	6212383	6220675	6230599	portal,terminase,protease,capsid	Azospirillum_phage(28.57%)	13	NA	NA
WP_170205138.1|6212383_6213613_-|capsid	phage major capsid protein	capsid	B0VK33	Azospirillum_phage	34.2	8.6e-44
WP_170205719.1|6213609_6214464_-|protease	Clp protease ClpP	protease	A0A1S7FZ23	Listeria_phage	39.2	7.8e-36
WP_170205139.1|6214629_6215853_-|portal	phage portal protein	portal	B0VK31	Azospirillum_phage	39.8	1.4e-65
WP_170205140.1|6215852_6216029_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170205141.1|6216028_6217705_-|terminase	terminase large subunit	terminase	Q8W631	Enterobacteria_phage	52.3	4.4e-168
WP_170205142.1|6217707_6218112_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170205143.1|6218368_6218746_-	HNH endonuclease	NA	G3EN93	Psychrobacter_phage	44.1	1.4e-13
WP_170205144.1|6218794_6219238_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170205145.1|6219314_6219467_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170205146.1|6219475_6219787_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170205147.1|6219783_6219975_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170205148.1|6220116_6220371_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5NR91	Burkholderia_phage	76.2	1.0e-31
WP_170205149.1|6220354_6220675_+	helix-turn-helix transcriptional regulator	NA	A0A1S5NNJ5	Burkholderia_phage	71.0	1.8e-33
>prophage 1
NZ_CP051686	Duganella sp. GN2-R2 plasmid unnamed1, complete sequence	116582	2904	85113	116582	transposase,integrase	uncultured_virus(11.76%)	56	56410:56424	86853:86867
WP_170205774.1|2904_4155_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	44.4	1.3e-42
WP_170205722.1|5622_6261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170205723.1|6421_6862_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170205724.1|8395_9424_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_170205725.1|9635_12485_-	insulinase family protein	NA	NA	NA	NA	NA
WP_170205726.1|13104_14874_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_170205727.1|15696_16029_-	H-NS histone family protein	NA	NA	NA	NA	NA
WP_170205728.1|16468_17407_+|transposase	IS5 family transposase	transposase	A0A1V0E8E1	Vibrio_phage	42.9	4.1e-62
WP_170203843.1|17500_18877_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	31.9	7.1e-39
WP_170205729.1|19516_19831_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_170205730.1|19889_20873_-	DUF4158 domain-containing protein	NA	A0A1B0V7H9	Salmonella_phage	67.0	4.2e-126
WP_170205731.1|20962_21562_-	recombinase family protein	NA	A0A219Y9V9	Aeromonas_phage	38.8	5.3e-23
WP_170205732.1|22315_23770_+	beta-lactamase family protein	NA	A0A059VK80	Mycobacterium_phage	35.6	1.2e-12
WP_170205775.1|24078_25278_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	31.9	6.2e-39
WP_170205733.1|26510_26819_+	hypothetical protein	NA	NA	NA	NA	NA
WP_170205776.1|27439_28828_-	MFS transporter	NA	NA	NA	NA	NA
WP_170205777.1|29425_30673_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	44.9	3.7e-42
WP_170205734.1|34100_35138_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.7	1.5e-12
WP_170205735.1|35080_36058_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.5	1.7e-18
WP_170205736.1|36065_36995_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_170205737.1|36991_37969_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_170205738.1|37994_39584_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_170205739.1|39593_40214_-	glutathione S-transferase	NA	NA	NA	NA	NA
WP_170205740.1|40388_41135_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA	NA
WP_170205741.1|42246_43521_-	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
WP_170205742.1|43580_44660_-	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_170205743.1|44819_46280_-	MFS transporter	NA	NA	NA	NA	NA
WP_170205744.1|46267_46777_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_170205745.1|46769_50894_-	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	27.2	5.3e-98
WP_170205746.1|50890_52801_-	non-ribosomal peptide synthetase	NA	NA	NA	NA	NA
WP_170205747.1|52863_54054_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170205778.1|54105_55275_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170205748.1|55421_56249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170205749.1|56265_56982_-	2OG-Fe(II) oxygenase	NA	NA	NA	NA	NA
56410:56424	attL	TGTGATCGTGATCGA	NA	NA	NA	NA
WP_170205779.1|57574_60019_+	penicillin acylase family protein	NA	NA	NA	NA	NA
WP_170205750.1|60099_61293_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_170205751.1|61374_62349_+	sterol desaturase family protein	NA	NA	NA	NA	NA
WP_170205752.1|62391_63807_-	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.5	2.6e-20
WP_170205753.1|68056_69250_-	HAMP domain-containing histidine kinase	NA	A0A1B0VMK3	Pseudomonas_phage	24.8	9.6e-16
WP_170205754.1|69540_69921_+	response regulator	NA	NA	NA	NA	NA
WP_170205755.1|70055_71204_-	HAMP domain-containing histidine kinase	NA	A0A1B0VMK3	Pseudomonas_phage	26.1	8.6e-22
WP_170202515.1|71291_72378_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	37.1	2.6e-44
WP_170205756.1|74342_74714_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170205757.1|74726_76442_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170205758.1|78063_78396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001166628.1|78402_78858_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_001294660.1|78929_79280_+	mercuric transport protein MerT	NA	NA	NA	NA	NA
WP_000732276.1|79295_79571_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA	NA
WP_000522993.1|79598_80006_+	organomercurial transporter MerC	NA	NA	NA	NA	NA
WP_003055149.1|80044_81727_+	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.8	1.5e-38
WP_001277463.1|81744_82110_+	mercury resistance co-regulator MerD	NA	NA	NA	NA	NA
WP_001087807.1|82106_82343_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA	NA
WP_001446012.1|82326_82446_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000993245.1|82408_82621_+	DUF3330 domain-containing protein	NA	NA	NA	NA	NA
WP_170205759.1|82752_83328_+	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	84.3	1.2e-48
WP_170205760.1|84093_85113_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
86853:86867	attR	TGTGATCGTGATCGA	NA	NA	NA	NA
