The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040616	Campylobacter sp. CFSAN093257 chromosome, complete genome	1720666	486627	495074	1720666		Campylobacter_phage(90.0%)	12	NA	NA
WP_165433065.1|486627_487662_+	DUF5309 family protein	NA	A0A2I7SBK1	Pseudomonas_phage	30.5	2.6e-17
WP_002875078.1|487661_488066_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002874379.1|488046_488241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_168940553.1|489947_490886_+	hypothetical protein	NA	X2KLU0	Campylobacter_phage	67.5	3.1e-46
WP_002875080.1|490887_491337_+	hypothetical protein	NA	X2KQT3	Campylobacter_phage	100.0	3.0e-79
WP_002873428.1|491349_491985_+	DUF4376 domain-containing protein	NA	X2KRD7	Campylobacter_phage	99.1	6.5e-96
WP_002875081.1|491981_492365_+	hypothetical protein	NA	X2KXD5	Campylobacter_phage	99.2	9.1e-61
WP_004306042.1|492357_492732_+	DUF1353 domain-containing protein	NA	X2KPN9	Campylobacter_phage	96.0	9.2e-66
WP_087704157.1|492728_494009_+	hypothetical protein	NA	X2KLT6	Campylobacter_phage	92.3	1.5e-211
WP_052773829.1|494057_494534_+	hypothetical protein	NA	X2KQY5	Campylobacter_phage	75.3	2.1e-62
WP_087691850.1|494539_494959_+	hypothetical protein	NA	X2KX19	Campylobacter_phage	83.9	8.5e-44
WP_002796174.1|494876_495074_+	hypothetical protein	NA	X2KPN2	Campylobacter_phage	95.4	3.2e-25
>prophage 2
NZ_CP040616	Campylobacter sp. CFSAN093257 chromosome, complete genome	1720666	636941	738255	1720666	protease,integrase,transposase,capsid,plate,tRNA,tail,terminase	Campylobacter_phage(43.9%)	108	689948:689966	724797:724815
WP_032581037.1|636941_638693_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	24.6	1.8e-10
WP_100620912.1|638784_639645_+	NAD(+) kinase	NA	NA	NA	NA	NA
WP_070310943.1|639644_641168_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_002858608.1|641273_642518_+	bile resistance response regulator CbrR	NA	NA	NA	NA	NA
WP_002874292.1|642508_643324_+	TatD family hydrolase	NA	NA	NA	NA	NA
WP_002852087.1|643323_644442_+	lytic transglycosylase domain-containing protein	NA	A0A218M4G6	Pasteurella_phage	34.1	1.6e-09
WP_002852227.1|644401_645229_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	50.0	5.6e-23
WP_044778964.1|645234_645723_+	HAD-IIIA family hydrolase	NA	A0A140XBD6	Dickeya_phage	41.2	2.5e-15
WP_002921129.1|645713_646229_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002859586.1|646210_646672_+	organic solvent tolerance protein OstA	NA	NA	NA	NA	NA
WP_002867727.1|646668_647265_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_002852364.1|647261_647756_+	membrane protein	NA	NA	NA	NA	NA
WP_002859991.1|647756_649562_+	penicillin-binding protein 2	NA	NA	NA	NA	NA
WP_165433113.1|649682_651473_-	aminopeptidase P family N-terminal domain-containing protein	NA	A0A0P0I8D7	Acinetobacter_phage	47.6	1.1e-159
WP_032586465.1|651488_653042_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	47.5	1.6e-127
WP_100625862.1|653213_653945_-	peptide ABC transporter	NA	A0A0P0IY73	Acinetobacter_phage	44.7	5.6e-51
WP_100625863.1|653950_654322_-	amino acid transporter	NA	A0A0P0IY73	Acinetobacter_phage	43.3	9.9e-20
WP_100626009.1|654867_655416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100616580.1|655408_656515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002852114.1|656501_657377_-	GTPase Era	NA	NA	NA	NA	NA
WP_002852226.1|657373_658693_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	28.6	6.2e-40
WP_002781630.1|658689_659232_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_002781628.1|659231_659675_-	50S ribosomal protein L9	NA	NA	NA	NA	NA
WP_002872601.1|659687_660908_-	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_002860004.1|661062_661308_+	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
WP_002872602.1|661304_661712_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_002868415.1|661704_662433_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	31.8	1.4e-25
WP_002874592.1|662432_663683_+	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_002856715.1|663845_665270_+	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA	NA
WP_019260295.1|665411_665600_+	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_002860008.1|671894_673868_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_002852327.1|674021_674252_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002854947.1|674241_674484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002852324.1|674480_674918_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_002860009.1|674899_676753_+	primosomal protein N'	NA	NA	NA	NA	NA
WP_002854766.1|678303_679377_+	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA	NA	NA	NA	NA
WP_002852146.1|679406_680105_-	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_072223312.1|680194_681700_+	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_002852136.1|681713_682904_+	acetate kinase	NA	NA	NA	NA	NA
WP_052791646.1|685627_686257_+	LexA family transcriptional regulator	NA	A7YGK7	Campylobacter_phage	98.2	1.3e-59
WP_002865000.1|686337_686658_+	hypothetical protein	NA	A7YGI4	Campylobacter_phage	100.0	1.3e-52
WP_002843339.1|686667_686862_+	hypothetical protein	NA	A7YG72	Campylobacter_phage	100.0	1.8e-28
WP_002865289.1|686941_687229_+	hypothetical protein	NA	A7YGG4	Campylobacter_phage	100.0	1.9e-47
WP_052777351.1|687256_688072_-	DNA adenine methylase	NA	A7YGS0	Campylobacter_phage	99.6	3.1e-151
WP_002865380.1|688273_688762_-	phage virion morphogenesis protein	NA	A7YGE7	Campylobacter_phage	100.0	2.0e-89
WP_043012784.1|688765_690982_-|tail	phage tail tape measure protein	tail	A7YG87	Campylobacter_phage	100.0	0.0e+00
689948:689966	attL	TTTTAAAGCTTCTTTATAA	NA	NA	NA	NA
WP_002865378.1|691023_691329_+	hypothetical protein	NA	A7YGX3	Campylobacter_phage	100.0	2.7e-39
WP_002873740.1|691440_691680_-|tail	phage tail assembly protein	tail	A7YGZ3	Campylobacter_phage	93.8	9.4e-24
WP_002865376.1|691832_692342_-|tail	tail protein	tail	A7YG76	Campylobacter_phage	100.0	3.3e-90
WP_039332501.1|692368_693562_-|tail	phage tail sheath family protein	tail	A7YGF4	Campylobacter_phage	100.0	5.0e-198
WP_165433153.1|693580_694588_-	hypothetical protein	NA	A7YG78	Campylobacter_phage	98.8	3.2e-190
WP_043012791.1|694688_695060_-	DUF1353 domain-containing protein	NA	A7YG79	Campylobacter_phage	100.0	2.0e-68
WP_057036462.1|695056_695563_-	DUF4376 domain-containing protein	NA	A7YGM4	Campylobacter_phage	99.4	9.8e-87
WP_100625241.1|695587_696619_-|tail	phage tail protein	tail	A7YG81	Campylobacter_phage	98.3	1.7e-186
WP_100608269.1|696618_697239_-|tail	phage tail protein I	tail	A7YH02	Campylobacter_phage	97.5	9.6e-60
WP_100616497.1|697336_698503_-|plate	baseplate J/gp47 family protein	plate	Q8H9N3	Vibrio_phage	24.6	3.9e-14
WP_002795239.1|698499_698790_-	GPW/gp25 family protein	NA	Q8H9N4	Vibrio_phage	40.8	2.7e-09
WP_002795238.1|698786_698978_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100608270.1|698986_699619_-|plate	phage baseplate assembly protein V	plate	A0A0F7LDY9	Escherichia_phage	31.4	6.0e-09
WP_002784492.1|699618_699933_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002784496.1|700044_700293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100616499.1|700289_700631_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057033856.1|700641_701031_-	DUF882 domain-containing protein	NA	A0A1X9Q0V8	Human_gokushovirus	47.1	6.5e-22
WP_002873731.1|701177_701612_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002873730.1|701613_702429_+	hypothetical protein	NA	A0A2H4JAW3	uncultured_Caudovirales_phage	48.4	2.9e-24
WP_038401719.1|702431_702959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002784507.1|702961_703939_+|capsid	major capsid protein	capsid	R9TRN2	Rhizobium_phage	23.4	3.3e-06
WP_002855185.1|704053_704512_+	DUF1320 family protein	NA	NA	NA	NA	NA
WP_002803360.1|704504_705104_+	DUF1804 family protein	NA	NA	NA	NA	NA
WP_041016314.1|705103_706774_+|terminase	phage terminase large subunit	terminase	A0A0A1IW02	Pseudomonas_phage	41.1	1.1e-91
WP_004297439.1|706783_708154_+	DUF935 family protein	NA	A0A2H4JHL1	uncultured_Caudovirales_phage	26.6	5.8e-17
WP_100608272.1|708155_709394_+	hypothetical protein	NA	M4M9M5	Vibrio_phage	29.8	1.9e-19
WP_052777709.1|709519_709894_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_002784520.1|709886_710078_+|tail	tail protein	tail	NA	NA	NA	NA
WP_002852060.1|710071_711049_+|tail	tail protein	tail	A0A219Y9Y2	Aeromonas_phage	25.7	6.2e-13
WP_002784523.1|711045_711330_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_002876312.1|711423_712095_+	endonuclease	NA	NA	NA	NA	NA
WP_002784526.1|712086_712362_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002876315.1|712408_712858_-	DUF1018 domain-containing protein	NA	NA	NA	NA	NA
WP_057031538.1|712854_713547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002784531.1|713546_713816_-	hypothetical protein	NA	NA	NA	NA	NA
WP_057031537.1|713812_714775_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052797554.1|714883_715291_-	hypothetical protein	NA	A0A2R3ZY25	Campylobacter_phage	54.1	5.9e-34
WP_002938698.1|715301_715733_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071319654.1|715729_716002_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024266021.1|716073_716559_-	host-nuclease inhibitor protein Gam	NA	A0A2K9VGT9	Faecalibacterium_phage	32.7	1.2e-17
WP_100608273.1|716754_717093_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002824157.1|717226_717412_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002795448.1|717408_717600_-	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA	NA
WP_052806498.1|717602_718526_-	AAA family ATPase	NA	A0A2H4JAW1	uncultured_Caudovirales_phage	25.0	5.1e-09
WP_100608275.1|718696_720772_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_002826948.1|720768_720969_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002791430.1|721118_721793_+	LexA family transcriptional regulator	NA	X2KRC9	Campylobacter_phage	32.3	1.4e-24
WP_057041943.1|721792_722494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002852223.1|724386_724878_+	hypothetical protein	NA	NA	NA	NA	NA
724797:724815	attR	TTATAAAGAAGCTTTAAAA	NA	NA	NA	NA
WP_002852050.1|724865_725804_-	hypothetical protein	NA	NA	NA	NA	NA
WP_165433120.1|725803_726742_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_100621771.1|726900_728391_+	SurA N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_002859607.1|728387_729776_+	cell division protein FtsA	NA	NA	NA	NA	NA
WP_002852071.1|729791_730904_+	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_002868406.1|731059_731872_+	flagellar hook-basal body protein	NA	NA	NA	NA	NA
WP_002852142.1|731902_732694_+	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_002858636.1|732760_734191_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_002852254.1|734393_735089_+	chemotaxis protein	NA	NA	NA	NA	NA
WP_002852318.1|735085_736339_+	U32 family peptidase	NA	Q6DW11	Phage_TP	31.1	1.4e-38
WP_002860021.1|736339_736834_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA	NA
WP_002852251.1|736843_737380_+	DUF3972 domain-containing protein	NA	NA	NA	NA	NA
WP_002852069.1|737391_738255_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
>prophage 3
NZ_CP040616	Campylobacter sp. CFSAN093257 chromosome, complete genome	1720666	1439135	1445771	1720666		Tupanvirus(16.67%)	8	NA	NA
WP_002857908.1|1439135_1439801_-	D-glycero-D-manno-heptose 1-phosphate guanosyltransferase	NA	A0A2K9L821	Tupanvirus	26.6	4.1e-08
WP_002857991.1|1439788_1440394_-	D-sedoheptulose 7-phosphate isomerase	NA	A0A067XQR2	Caulobacter_phage	35.0	2.2e-16
WP_002858413.1|1440381_1441401_-	D-glycero-D-manno-heptose 7-phosphate kinase	NA	A0A222YW25	Synechococcus_phage	40.7	2.7e-59
WP_002857889.1|1441420_1442272_-	FkbM family methyltransferase	NA	NA	NA	NA	NA
WP_002858299.1|1442290_1443232_-	NAD-dependent epimerase/dehydratase	NA	A0A0F7LC08	uncultured_marine_virus	46.1	1.0e-73
WP_002864205.1|1443255_1444296_-	GDP-L-fucose synthase	NA	M1HWW2	Paramecium_bursaria_Chlorella_virus	44.4	1.7e-69
WP_002852387.1|1444295_1445222_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002858190.1|1445225_1445771_-	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	A0A1D8EQH2	Escherichia_phage	32.4	6.1e-18
