assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_012931645.1_ASM1293164v1	NZ_CP051875	Acinetobacter baumannii strain Ab-B004d-c chromosome, complete genome	1	1542542-1542630	1	CRISPRCasFinder	no		csa3,RT,cas3,DEDDh,WYL	Orphan	GAGATTGATTATCTCTTACTTTTTCGCAAGA	31	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,cas3,DEDDh,WYL	NA|73aa|up_3|NZ_CP051875.1_1539174_1539393_+,NA	NA|158aa|up_9|NZ_CP051875.1_1533383_1533857_+	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE	NA|651aa|up_8|NZ_CP051875.1_1533849_1535802_+	PRK00095, mutL, DNA mismatch repair endonuclease MutL	NA|315aa|up_7|NZ_CP051875.1_1535808_1536753_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|173aa|up_6|NZ_CP051875.1_1536835_1537354_+	PRK00395, hfq, RNA-binding protein Hfq; Provisional	NA|286aa|up_5|NZ_CP051875.1_1537485_1538343_+	TIGR03340, phn_DUF6, phosphonate utilization associated putative membrane protein	NA|218aa|up_4|NZ_CP051875.1_1538381_1539035_-	PRK11053, PRK11053, oxygen-insensitive NAD(P)H nitroreductase	NA|73aa|up_3|NZ_CP051875.1_1539174_1539393_+	NA	NA|240aa|up_2|NZ_CP051875.1_1539400_1540120_-	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP051875.1_1540135_1540645_-	cd01920, cyclophilin_EcCYP_like, cyclophilin_EcCYP_like: cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E	NA|576aa|up_0|NZ_CP051875.1_1540813_1542541_+	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional	NA|241aa|down_0|NZ_CP051875.1_1543026_1543749_-	PRK07053, PRK07053, glutamine amidotransferase; Provisional	NA|462aa|down_1|NZ_CP051875.1_1544739_1546125_-	PRK15067, PRK15067, ethanolamine ammonia-lyase subunit EutB	NA|479aa|down_2|NZ_CP051875.1_1546141_1547578_-	TIGR00908, putative_ethanolamine_permease, ethanolamine permease	NA|504aa|down_3|NZ_CP051875.1_1547799_1549311_-	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like	NA|397aa|down_4|NZ_CP051875.1_1549454_1550645_+	PRK11388, PRK11388, DNA-binding transcriptional regulator DhaR; Provisional	NA|323aa|down_5|NZ_CP051875.1_1550641_1551610_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|391aa|down_6|NZ_CP051875.1_1551804_1552977_-	cd08188, PDDH, 1,3-Propanediol (1,3-PD) dehydrogenase	NA|571aa|down_7|NZ_CP051875.1_1553207_1554920_+	cd18037, DEXSc_Pif1_like, DEAD-box helicase domain of Pif1	NA|122aa|down_8|NZ_CP051875.1_1554957_1555323_+	cd00580, CHMI, 5-carboxymethyl-2-hydroxymuconate isomerase (CHMI) is a trimeric enzyme catalyzing the isomerization of the unsaturated ketone 5-(carboxymethyl)-2-hydroxymuconate to 5-(carboxymethyl)-2-oxo-3-hexene-1,6-dionate	NA|284aa|down_9|NZ_CP051875.1_1555404_1556256_+	COG3449, COG3449, DNA gyrase inhibitor [DNA replication, recombination, and repair]
GCF_012931645.1_ASM1293164v1	NZ_CP051875	Acinetobacter baumannii strain Ab-B004d-c chromosome, complete genome	2	1799813-1799960	2	CRISPRCasFinder	no		csa3,RT,cas3,DEDDh,WYL	Orphan	TTATGGTTAATTTGTATTGAACTTTTTACAGGTATAAAAAAACGCCACCT	50	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,cas3,DEDDh,WYL	NA|82aa|up_9|NZ_CP051875.1_1791631_1791877_-,NA|108aa|up_4|NZ_CP051875.1_1796394_1796718_+,NA|78aa|down_0|NZ_CP051875.1_1799973_1800207_-,NA|120aa|down_1|NZ_CP051875.1_1800422_1800782_+,NA|109aa|down_2|NZ_CP051875.1_1800882_1801209_+	NA|82aa|up_9|NZ_CP051875.1_1791631_1791877_-	NA	NA|140aa|up_8|NZ_CP051875.1_1792136_1792556_-	COG3193, GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol [General function prediction only]	NA|434aa|up_7|NZ_CP051875.1_1792748_1794050_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|265aa|up_6|NZ_CP051875.1_1794402_1795197_+	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|301aa|up_5|NZ_CP051875.1_1795248_1796151_-	cd08473, PBP2_CrgA_like_4, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|108aa|up_4|NZ_CP051875.1_1796394_1796718_+	NA	NA|114aa|up_3|NZ_CP051875.1_1796764_1797106_-	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family	NA|403aa|up_2|NZ_CP051875.1_1797333_1798542_+	PRK02627, PRK02627, acetylornithine aminotransferase; Provisional	NA|144aa|up_1|NZ_CP051875.1_1798592_1799024_-	cd04623, CBS_pair_bac_euk, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and eukaryotes	NA|111aa|up_0|NZ_CP051875.1_1799164_1799497_-	pfam11042, DUF2750, Protein of unknown function (DUF2750)	NA|78aa|down_0|NZ_CP051875.1_1799973_1800207_-	NA	NA|120aa|down_1|NZ_CP051875.1_1800422_1800782_+	NA	NA|109aa|down_2|NZ_CP051875.1_1800882_1801209_+	NA	NA|369aa|down_3|NZ_CP051875.1_1801316_1802423_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|199aa|down_4|NZ_CP051875.1_1802612_1803209_+	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|224aa|down_5|NZ_CP051875.1_1803434_1804106_+	pfam09829, DUF2057, Uncharacterized protein conserved in bacteria (DUF2057)	NA|175aa|down_6|NZ_CP051875.1_1804178_1804703_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|100aa|down_7|NZ_CP051875.1_1804715_1805015_-	pfam09600, Cyd_oper_YbgE, Cyd operon protein YbgE (Cyd_oper_YbgE)	NA|34aa|down_8|NZ_CP051875.1_1805015_1805117_-	pfam08173, YbgT_YccB, Membrane bound YbgT-like protein	NA|382aa|down_9|NZ_CP051875.1_1805130_1806276_-	TIGR00203, ubiquinol_oxidase_subunit_2, cytochrome d oxidase, subunit II (cydB)
GCF_012931645.1_ASM1293164v1	NZ_CP051875	Acinetobacter baumannii strain Ab-B004d-c chromosome, complete genome	3	2472174-2472271	3	CRISPRCasFinder	no		csa3,RT,cas3,DEDDh,WYL	Orphan	CCAGCTTCACGAGCTTCTTCTGAGGTAAATTCATG	35	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,cas3,DEDDh,WYL	NA|51aa|up_8|NZ_CP051875.1_2461738_2461891_+,NA|79aa|up_0|NZ_CP051875.1_2470873_2471110_+,NA|138aa|down_0|NZ_CP051875.1_2472890_2473304_+,NA|106aa|down_6|NZ_CP051875.1_2479390_2479708_+,NA|74aa|down_7|NZ_CP051875.1_2479792_2480014_-,NA|143aa|down_8|NZ_CP051875.1_2480101_2480530_-,NA|48aa|down_9|NZ_CP051875.1_2480799_2480943_-	NA|212aa|up_9|NZ_CP051875.1_2461014_2461650_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|51aa|up_8|NZ_CP051875.1_2461738_2461891_+	NA	NA|95aa|up_7|NZ_CP051875.1_2461958_2462243_-	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase	NA|320aa|up_6|NZ_CP051875.1_2462385_2463345_-	cd19920, REC_PA4781-like, phosphoacceptor receiver (REC) domain of cyclic di-GMP phosphodiesterase PA4781 and similar domains	NA|1155aa|up_5|NZ_CP051875.1_2463341_2466806_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|549aa|up_4|NZ_CP051875.1_2466971_2468618_+	COG1457, CodB, Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]	NA|152aa|up_3|NZ_CP051875.1_2468683_2469139_-	smart00344, HTH_ASNC, helix_turn_helix ASNC type	NA|204aa|up_2|NZ_CP051875.1_2469295_2469907_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|204aa|up_1|NZ_CP051875.1_2469979_2470591_-	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit	NA|79aa|up_0|NZ_CP051875.1_2470873_2471110_+	NA	NA|138aa|down_0|NZ_CP051875.1_2472890_2473304_+	NA	NA|293aa|down_1|NZ_CP051875.1_2473445_2474324_+	cd05355, SDR_c1, classical (c) SDR, subgroup 1	NA|715aa|down_2|NZ_CP051875.1_2474378_2476523_-	PRK11249, katE, hydroperoxidase II; Provisional	NA|470aa|down_3|NZ_CP051875.1_2476577_2477987_-	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme	NA|160aa|down_4|NZ_CP051875.1_2478302_2478782_+	COG1546, CinA, Uncharacterized protein (competence- and mitomycin-induced) [General function prediction only]	NA|73aa|down_5|NZ_CP051875.1_2479066_2479285_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|106aa|down_6|NZ_CP051875.1_2479390_2479708_+	NA	NA|74aa|down_7|NZ_CP051875.1_2479792_2480014_-	NA	NA|143aa|down_8|NZ_CP051875.1_2480101_2480530_-	NA	NA|48aa|down_9|NZ_CP051875.1_2480799_2480943_-	NA
GCF_012931645.1_ASM1293164v1	NZ_CP051875	Acinetobacter baumannii strain Ab-B004d-c chromosome, complete genome	4	2479109-2479194	4	CRISPRCasFinder	no		csa3,RT,cas3,DEDDh,WYL	Orphan	CAGCAACAACAGCAAAATGACAACCG	26	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,cas3,DEDDh,WYL	NA|79aa|up_6|NZ_CP051875.1_2470873_2471110_+,NA|138aa|up_4|NZ_CP051875.1_2472890_2473304_+,NA|106aa|down_0|NZ_CP051875.1_2479390_2479708_+,NA|74aa|down_1|NZ_CP051875.1_2479792_2480014_-,NA|143aa|down_2|NZ_CP051875.1_2480101_2480530_-,NA|48aa|down_3|NZ_CP051875.1_2480799_2480943_-,NA|97aa|down_4|NZ_CP051875.1_2481912_2482203_+	NA|152aa|up_9|NZ_CP051875.1_2468683_2469139_-	smart00344, HTH_ASNC, helix_turn_helix ASNC type	NA|204aa|up_8|NZ_CP051875.1_2469295_2469907_+	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism]	NA|204aa|up_7|NZ_CP051875.1_2469979_2470591_-	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit	NA|79aa|up_6|NZ_CP051875.1_2470873_2471110_+	NA	NA|412aa|up_5|NZ_CP051875.1_2471170_2472406_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|138aa|up_4|NZ_CP051875.1_2472890_2473304_+	NA	NA|293aa|up_3|NZ_CP051875.1_2473445_2474324_+	cd05355, SDR_c1, classical (c) SDR, subgroup 1	NA|715aa|up_2|NZ_CP051875.1_2474378_2476523_-	PRK11249, katE, hydroperoxidase II; Provisional	NA|470aa|up_1|NZ_CP051875.1_2476577_2477987_-	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme	NA|160aa|up_0|NZ_CP051875.1_2478302_2478782_+	COG1546, CinA, Uncharacterized protein (competence- and mitomycin-induced) [General function prediction only]	NA|106aa|down_0|NZ_CP051875.1_2479390_2479708_+	NA	NA|74aa|down_1|NZ_CP051875.1_2479792_2480014_-	NA	NA|143aa|down_2|NZ_CP051875.1_2480101_2480530_-	NA	NA|48aa|down_3|NZ_CP051875.1_2480799_2480943_-	NA	NA|97aa|down_4|NZ_CP051875.1_2481912_2482203_+	NA	NA|302aa|down_5|NZ_CP051875.1_2482204_2483110_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|413aa|down_6|NZ_CP051875.1_2483221_2484460_+	cd01830, XynE_like, SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE	NA|428aa|down_7|NZ_CP051875.1_2484504_2485788_-	pfam11854, MtrB_PioB, Putative outer membrane beta-barrel porin, MtrB/PioB	NA|224aa|down_8|NZ_CP051875.1_2486031_2486703_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|565aa|down_9|NZ_CP051875.1_2486773_2488468_-	PRK08315, PRK08315, AMP-binding domain protein; Validated
GCF_012931645.1_ASM1293164v1	NZ_CP051876	Acinetobacter baumannii strain Ab-B004d-c plasmid pAb-B004d-c_1, complete sequence	1	31297-31373	1	CRISPRCasFinder	no			Orphan	CTTGTTGCAGTAGATGAACCAGA	23	1	2	31320-31350|31320-31350	NZ_CP051876.1_31410-31440|NZ_CP051876.1_31500-31530	NA	1	1	Orphan	csa3,RT,cas3,DEDDh,WYL	NA|100aa|up_6|NZ_CP051876.1_22728_23028_+,NA|94aa|down_0|NZ_CP051876.1_31858_32140_+,NA|129aa|down_2|NZ_CP051876.1_33859_34246_+,NA|75aa|down_3|NZ_CP051876.1_34256_34481_+,NA|112aa|down_6|NZ_CP051876.1_36706_37042_+	NA|102aa|up_9|NZ_CP051876.1_19624_19930_+	pfam04956, TrbC, TrbC/VIRB2 family	NA|109aa|up_8|NZ_CP051876.1_19929_20256_+	pfam05101, VirB3, Type IV secretory pathway, VirB3-like protein	NA|821aa|up_7|NZ_CP051876.1_20263_22726_+	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family	NA|100aa|up_6|NZ_CP051876.1_22728_23028_+	NA	NA|342aa|up_5|NZ_CP051876.1_23051_24077_+	pfam04610, TrbL, TrbL/VirB6 plasmid conjugal transfer protein	NA|234aa|up_4|NZ_CP051876.1_24088_24790_+	pfam07996, T4SS, Type IV secretion system proteins	NA|272aa|up_3|NZ_CP051876.1_24953_25769_+	COG3736, VirB8, Type IV secretory pathway, component VirB8 [Intracellular trafficking and secretion]	NA|298aa|up_2|NZ_CP051876.1_25780_26674_+	TIGR02781, Protein_virB9, P-type conjugative transfer protein VirB9	NA|475aa|up_1|NZ_CP051876.1_26673_28098_+	cd16429, VirB10, VirB10 forms part of core complex in Type IV secretion system (T4SS)	NA|371aa|up_0|NZ_CP051876.1_28078_29191_+	TIGR02788, conjugal_transfer_protein, P-type DNA transfer ATPase VirB11	NA|94aa|down_0|NZ_CP051876.1_31858_32140_+	NA	NA|430aa|down_1|NZ_CP051876.1_32150_33440_+	pfam18821, LPD7, Large polyvalent protein-associated domain 7	NA|129aa|down_2|NZ_CP051876.1_33859_34246_+	NA	NA|75aa|down_3|NZ_CP051876.1_34256_34481_+	NA	NA|337aa|down_4|NZ_CP051876.1_34636_35647_-	pfam18144, SMODS, Second Messenger Oligonucleotide or Dinucleotide Synthetase domain	NA|293aa|down_5|NZ_CP051876.1_35667_36546_-	pfam18159, S_4TM, SMODS-associating 4TM effector domain	NA|112aa|down_6|NZ_CP051876.1_36706_37042_+	NA	NA|204aa|down_7|NZ_CP051876.1_37254_37866_+	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme	NA|295aa|down_8|NZ_CP051876.1_38055_38940_-	cd05152, MPH2', Macrolide 2'-Phosphotransferase	NA|492aa|down_9|NZ_CP051876.1_38995_40471_-	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
GCF_012931645.1_ASM1293164v1	NZ_CP051877	Acinetobacter baumannii strain Ab-B004d-c plasmid pAb-B004d-c_2, complete sequence	1	1357-1453	1	CRISPRCasFinder	no			Orphan	GTCATAGTTAGTAGTCAATCCGTCATAGTTAAG	33	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,cas3,DEDDh,WYL	NA,NA|124aa|down_0|NZ_CP051877.1_2519_2891_+,NA|57aa|down_1|NZ_CP051877.1_2893_3064_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|298aa|up_0|NZ_CP051877.1_421_1315_-	pfam01051, Rep_3, Initiator Replication protein	NA|124aa|down_0|NZ_CP051877.1_2519_2891_+	NA	NA|57aa|down_1|NZ_CP051877.1_2893_3064_+	NA	NA|154aa|down_2|NZ_CP051877.1_3386_3848_-	cd12208, septicolysin_like, putative septicolysin, cholesterol-dependent cytolysin family and related proteins	NA|804aa|down_3|NZ_CP051877.1_4152_6564_-	COG1629, CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism]	NA|105aa|down_4|NZ_CP051877.1_6691_7006_-	pfam14384, BrnA_antitoxin, BrnA antitoxin of type II toxin-antitoxin system	NA|96aa|down_5|NZ_CP051877.1_6992_7280_-	pfam04365, BrnT_toxin, Ribonuclease toxin, BrnT, of type II toxin-antitoxin system	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
