assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_012934575.1_ASM1293457v1	NZ_CP051716	Escherichia coli strain SCU-118 chromosome, complete genome	1	988340-988733	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACC	28,28,28	0	0	NA	NA	I-E:I-E:I-E	6,6,6	6	Unclear	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	NA|47aa|up_1|NZ_CP051716.1_987049_987190_-,NA	NA|434aa|up_9|NZ_CP051716.1_977746_979048_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP051716.1_979095_981330_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP051716.1_981407_981656_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP051716.1_981655_981991_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP051716.1_982061_982853_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP051716.1_983080_984718_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP051716.1_984805_986104_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP051716.1_986163_987036_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP051716.1_987049_987190_-	NA	NA|224aa|up_0|NZ_CP051716.1_987328_988000_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP051716.1_989372_990851_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP051716.1_990877_992155_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP051716.1_992473_993259_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP051716.1_993328_994783_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP051716.1_994804_996214_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP051716.1_996191_996971_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|298aa|down_6|NZ_CP051716.1_996934_997828_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP051716.1_997975_998551_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP051716.1_998567_998828_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP051716.1_998818_1000090_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_012934575.1_ASM1293457v1	NZ_CP051716	Escherichia coli strain SCU-118 chromosome, complete genome	2	1015350-1016051	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	Type I-E	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	7,11,11	11	TypeI-E	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|245aa|up_9|NZ_CP051716.1_1004434_1005169_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|889aa|up_8|NZ_CP051716.1_1005527_1008194_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|323aa|up_7|NZ_CP051716.1_1008853_1009822_+	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	cas8e|432aa|up_6|NZ_CP051716.1_1009887_1011183_+	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cse2gr11|161aa|up_5|NZ_CP051716.1_1011175_1011658_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|364aa|up_4|NZ_CP051716.1_1011670_1012762_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|225aa|up_3|NZ_CP051716.1_1012764_1013439_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|200aa|up_2|NZ_CP051716.1_1013425_1014025_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|306aa|up_1|NZ_CP051716.1_1014040_1014958_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|NZ_CP051716.1_1014959_1015244_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP051716.1_1016133_1017171_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP051716.1_1017422_1018331_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP051716.1_1018332_1019760_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP051716.1_1019759_1020365_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP051716.1_1020414_1020738_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP051716.1_1020931_1021243_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP051716.1_1021261_1021972_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP051716.1_1021971_1022451_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP051716.1_1022447_1023497_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP051716.1_1023477_1024239_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_012934575.1_ASM1293457v1	NZ_CP051716	Escherichia coli strain SCU-118 chromosome, complete genome	3	1534371-1534488	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|62aa|up_9|NZ_CP051716.1_1523656_1523842_-	PRK09956, PRK09956, ISNCY family transposase	NA|300aa|up_8|NZ_CP051716.1_1523854_1524754_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_7|NZ_CP051716.1_1524946_1526137_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_6|NZ_CP051716.1_1526133_1527393_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_5|NZ_CP051716.1_1527382_1529011_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_4|NZ_CP051716.1_1529283_1530642_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_3|NZ_CP051716.1_1530646_1531723_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|217aa|up_2|NZ_CP051716.1_1532185_1532836_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP051716.1_1532889_1533144_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP051716.1_1533143_1534274_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP051716.1_1534507_1536793_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1235aa|down_1|NZ_CP051716.1_1538313_1542018_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP051716.1_1542145_1542868_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP051716.1_1543014_1545642_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP051716.1_1545790_1547479_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP051716.1_1547475_1548099_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP051716.1_1548242_1552637_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|NZ_CP051716.1_1552637_1554287_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|NZ_CP051716.1_1554291_1555068_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_9|NZ_CP051716.1_1555141_1556326_-	PRK05790, PRK05790, putative acyltransferase; Provisional
GCF_012934575.1_ASM1293457v1	NZ_CP051716	Escherichia coli strain SCU-118 chromosome, complete genome	4	2131623-2131746	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	NA,NA|30aa|down_7|NZ_CP051716.1_2140642_2140732_+	NA|471aa|up_9|NZ_CP051716.1_2121077_2122490_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP051716.1_2123046_2123256_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP051716.1_2123710_2124337_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP051716.1_2124357_2126460_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP051716.1_2126472_2127111_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP051716.1_2127174_2127843_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP051716.1_2127839_2128625_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP051716.1_2128628_2129441_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP051716.1_2129452_2131057_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP051716.1_2131182_2131488_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP051716.1_2132060_2133317_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP051716.1_2133357_2134731_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP051716.1_2134945_2135587_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP051716.1_2135626_2136775_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP051716.1_2137065_2138277_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP051716.1_2138389_2139322_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP051716.1_2139318_2140344_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP051716.1_2140642_2140732_+	NA	NA|390aa|down_8|NZ_CP051716.1_2140897_2142067_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP051716.1_2142301_2142883_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_012934575.1_ASM1293457v1	NZ_CP051716	Escherichia coli strain SCU-118 chromosome, complete genome	5	2783129-2783220	5	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	NA|70aa|up_8|NZ_CP051716.1_2772207_2772417_-,NA	NA|503aa|up_9|NZ_CP051716.1_2770540_2772049_-	PRK15419, PRK15419, sodium/proline symporter PutP	NA|70aa|up_8|NZ_CP051716.1_2772207_2772417_-	NA	NA|1321aa|up_7|NZ_CP051716.1_2772471_2776434_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_6|NZ_CP051716.1_2776473_2777112_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_5|NZ_CP051716.1_2777399_2778491_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_4|NZ_CP051716.1_2778490_2779183_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_3|NZ_CP051716.1_2779194_2779581_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_2|NZ_CP051716.1_2779588_2780389_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_1|NZ_CP051716.1_2780398_2780989_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|443aa|up_0|NZ_CP051716.1_2781512_2782841_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP051716.1_2783643_2784240_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP051716.1_2784260_2784488_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP051716.1_2784525_2785767_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP051716.1_2786059_2787316_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP051716.1_2787576_2788497_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP051716.1_2788496_2788802_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP051716.1_2788953_2789553_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP051716.1_2789549_2792096_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP051716.1_2792095_2793268_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP051716.1_2793397_2794090_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_012934575.1_ASM1293457v1	NZ_CP051716	Escherichia coli strain SCU-118 chromosome, complete genome	6	3049215-3049359	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|330aa|up_9|NZ_CP051716.1_3037113_3038103_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP051716.1_3038499_3039408_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP051716.1_3039599_3041621_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP051716.1_3042199_3042877_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP051716.1_3042869_3043625_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP051716.1_3043611_3044766_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP051716.1_3044762_3045803_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP051716.1_3045889_3047179_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP051716.1_3047237_3047714_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP051716.1_3047865_3049149_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP051716.1_3049382_3051644_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP051716.1_3051826_3053260_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP051716.1_3053335_3054388_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP051716.1_3054571_3055525_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP051716.1_3055565_3056561_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP051716.1_3056715_3057534_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP051716.1_3057534_3058593_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP051716.1_3058595_3059285_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP051716.1_3059284_3060058_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP051716.1_3060224_3060374_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_012934575.1_ASM1293457v1	NZ_CP051716	Escherichia coli strain SCU-118 chromosome, complete genome	7	3298586-3298682	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	NA,NA	NA|231aa|up_9|NZ_CP051716.1_3290381_3291074_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP051716.1_3291293_3291836_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP051716.1_3292306_3293173_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP051716.1_3293174_3293387_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP051716.1_3293494_3294016_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP051716.1_3294051_3295437_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP051716.1_3295610_3296105_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP051716.1_3296107_3296830_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP051716.1_3296947_3297457_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP051716.1_3297453_3298521_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP051716.1_3298715_3299609_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP051716.1_3299605_3300421_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP051716.1_3300431_3301691_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP051716.1_3301700_3303368_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NZ_CP051716.1_3303684_3304734_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NZ_CP051716.1_3304755_3305991_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|NZ_CP051716.1_3306001_3306787_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_7|NZ_CP051716.1_3307014_3308160_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|NZ_CP051716.1_3308181_3309483_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|NZ_CP051716.1_3309539_3310901_-	PRK08044, PRK08044, allantoinase AllB
GCF_012934575.1_ASM1293457v1	NZ_CP051716	Escherichia coli strain SCU-118 chromosome, complete genome	8	3438727-3438871	8	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	Orphan	TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT	NA,NA|28aa|down_2|NZ_CP051716.1_3440916_3441000_-	NA|357aa|up_9|NZ_CP051716.1_3423865_3424936_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|194aa|up_8|NZ_CP051716.1_3425028_3425610_+	PRK10045, PRK10045, ACP phosphodiesterase	NA|606aa|up_7|NZ_CP051716.1_3425614_3427432_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|458aa|up_6|NZ_CP051716.1_3427587_3428961_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|up_5|NZ_CP051716.1_3429036_3430356_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|432aa|up_4|NZ_CP051716.1_3430762_3432058_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_3|NZ_CP051716.1_3432115_3432805_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|401aa|up_2|NZ_CP051716.1_3432994_3434197_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1049aa|up_1|NZ_CP051716.1_3434193_3437340_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|395aa|up_0|NZ_CP051716.1_3437465_3438650_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|303aa|down_0|NZ_CP051716.1_3438894_3439803_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|304aa|down_1|NZ_CP051716.1_3439927_3440839_+	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|28aa|down_2|NZ_CP051716.1_3440916_3441000_-	NA	NA|95aa|down_3|NZ_CP051716.1_3441485_3441770_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|226aa|down_4|NZ_CP051716.1_3441841_3442519_-	PRK10481, PRK10481, hypothetical protein; Provisional	NA|64aa|down_5|NZ_CP051716.1_3442776_3442968_-	PRK10380, PRK10380, hypothetical protein; Provisional	NA|175aa|down_6|NZ_CP051716.1_3443017_3443542_-	PRK03731, aroL, shikimate kinase AroL	NA|153aa|down_7|NZ_CP051716.1_3443724_3444183_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|270aa|down_8|NZ_CP051716.1_3444302_3445112_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|372aa|down_9|NZ_CP051716.1_3445128_3446244_-	PRK10245, adrA, diguanylate cyclase AdrA; Provisional
