The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP053027	Streptococcus agalactiae strain 01173 chromosome, complete genome	2105299	36470	48535	2105299		Microbacterium_phage(14.29%)	8	NA	NA
WP_001042263.1|36470_40196_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	27.0	1.6e-40
WP_000220672.1|40429_41884_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.5	6.3e-54
WP_001291325.1|41911_42934_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	44.6	9.6e-65
WP_000685111.1|43101_43653_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	1.8e-25
WP_000780020.1|43672_44425_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000166558.1|44444_45992_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	48.9	2.5e-77
WP_001045908.1|46184_47084_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A221J6U0	Arthrobacter_phage	45.9	4.1e-19
WP_000783424.1|47230_48535_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A2D1GNZ3	Streptomyces_phage	40.5	1.7e-05
>prophage 2
NZ_CP053027	Streptococcus agalactiae strain 01173 chromosome, complete genome	2105299	592297	673092	2105299	tail,holin,portal,capsid,transposase,terminase,protease,head	Streptococcus_phage(85.11%)	73	NA	NA
WP_001122304.1|592297_592498_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_001865698.1|592519_592780_+|transposase	IS3 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	43.0	3.4e-11
WP_001867107.1|592905_593115_+|transposase	transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	55.4	1.4e-15
WP_000508795.1|593287_593449_-	NINE protein	NA	NA	NA	NA	NA
WP_000594368.1|594190_595468_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000353149.1|595477_596134_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.8	2.2e-22
WP_000594351.1|596133_597510_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_000699093.1|597606_598260_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.6	8.1e-25
WP_000734168.1|598256_599558_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	25.7	1.7e-05
WP_000076709.1|600434_600614_+	CsbD family protein	NA	J7KJ36	Streptococcus_phage	96.4	4.3e-21
WP_000027835.1|600655_600844_+	hypothetical protein	NA	J7KIW4	Streptococcus_phage	78.2	3.3e-16
WP_000078931.1|601268_602474_+	rod shape-determining protein RodA	NA	NA	NA	NA	NA
WP_001106189.1|602592_603153_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_000134196.1|603153_605106_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.8	1.5e-143
WP_000094341.1|605199_606924_+	septation ring formation regulator EzrA	NA	NA	NA	NA	NA
WP_000589685.1|607017_607659_+	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
WP_000409124.1|607679_608165_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_000137373.1|608177_608633_-	YueI family protein	NA	W6LLD2	Streptococcus_phage	48.9	7.8e-27
WP_000022832.1|608830_610138_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	95.4	1.5e-235
WP_000823925.1|610245_611310_-	DNA/RNA non-specific endonuclease	NA	NA	NA	NA	NA
WP_000772014.1|611538_612822_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_001127193.1|612814_613327_+	shikimate kinase	NA	NA	NA	NA	NA
WP_000089337.1|613383_614757_+	LCP family protein	NA	NA	NA	NA	NA
WP_000902654.1|614857_616213_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	D0R096	Streptococcus_phage	73.6	1.8e-191
WP_001261516.1|616734_617253_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
WP_169858604.1|617554_618085_-	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_169858610.1|623148_624660_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_000459854.1|625519_627388_+	ImmA/IrrE family metallo-endopeptidase	NA	E4ZFJ9	Streptococcus_phage	81.0	5.2e-303
WP_001122250.1|627796_628366_+	hypothetical protein	NA	A0A1B0RXB3	Streptococcus_phage	81.0	1.1e-86
WP_000905646.1|628404_630360_-	DNA polymerase	NA	D0R0B0	Streptococcus_phage	84.0	0.0e+00
WP_000464240.1|630409_630574_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000208946.1|630590_631154_-	DUF2815 family protein	NA	A0A1B0RXA9	Streptococcus_phage	93.4	3.3e-91
WP_001873559.1|631158_632280_-	DUF2800 domain-containing protein	NA	A0A1X9I6D8	Streptococcus_phage	87.9	2.6e-196
WP_000041407.1|632272_632596_-	hypothetical protein	NA	A0A1B0RXB7	Streptococcus_phage	71.2	2.0e-32
WP_001160920.1|632992_635278_+	hypothetical protein	NA	E4ZFK6	Streptococcus_phage	79.1	0.0e+00
WP_001208492.1|635561_635843_+	VRR-NUC domain-containing protein	NA	M1PFY8	Streptococcus_phage	79.6	7.9e-38
WP_000768926.1|635823_637200_+	DEAD/DEAH box helicase	NA	A0A1X9I6B0	Streptococcus_phage	86.2	5.2e-231
WP_000356300.1|637192_637690_+	hypothetical protein	NA	A0A1B0RXB9	Streptococcus_phage	75.0	4.3e-63
WP_000640707.1|638082_639120_+	methionine adenosyltransferase	NA	E4ZFL0	Streptococcus_phage	84.9	2.2e-170
WP_001138031.1|639121_639487_+	HNH endonuclease	NA	A0A1B0RXJ3	Streptococcus_phage	86.0	6.6e-61
WP_000999418.1|639774_640230_+	hypothetical protein	NA	A0A1B0RXC6	Streptococcus_phage	51.0	5.4e-44
WP_000211620.1|640201_641458_+	DNA modification methylase	NA	A0A1B0RXE5	Streptococcus_phage	90.7	7.5e-221
WP_000176350.1|641454_642708_+	DNA (cytosine-5-)-methyltransferase	NA	M1NSK8	Streptococcus_phage	93.8	2.5e-232
WP_000164539.1|642785_643040_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000342209.1|643050_643500_+	DUF4314 domain-containing protein	NA	E4ZFL7	Streptococcus_phage	65.2	2.1e-16
WP_000220985.1|644006_645599_+|terminase	terminase large subunit	terminase	A0A1B0RXJ8	Streptococcus_phage	95.5	1.5e-306
WP_001140392.1|645654_645957_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_000666489.1|645956_646262_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_000424367.1|646278_646551_+	hypothetical protein	NA	E4ZFM1	Streptococcus_phage	78.0	4.1e-07
WP_000523688.1|646631_647921_+|portal	phage portal protein	portal	E4ZFM3	Streptococcus_phage	91.0	2.0e-229
WP_001225236.1|647913_648612_+|protease	Clp protease ClpP	protease	A0A1B0RXE1	Streptococcus_phage	82.8	1.4e-104
WP_000040500.1|648625_649834_+|capsid	phage major capsid protein	capsid	E4ZFM5	Streptococcus_phage	91.3	6.8e-211
WP_000988605.1|649830_650088_+|head,tail	phage gp6-like head-tail connector protein	head,tail	D0R0D7	Streptococcus_phage	78.8	4.3e-30
WP_000684962.1|650087_650426_+|head,tail	head-tail adaptor protein	head,tail	A0A1B0RXE4	Streptococcus_phage	69.6	1.2e-37
WP_000161241.1|650418_650787_+	HK97 gp10 family phage protein	NA	Q6DMT7	Streptococcus_phage	62.1	9.1e-34
WP_001209971.1|650795_651122_+	hypothetical protein	NA	M1Q1Z4	Streptococcus_phage	67.6	5.4e-38
WP_000818565.1|651124_651694_+	hypothetical protein	NA	E4ZFM9	Streptococcus_phage	97.3	5.1e-100
WP_001249616.1|651705_652125_+	hypothetical protein	NA	A0A1X9I691	Streptococcus_phage	75.5	2.8e-55
WP_000918343.1|652419_655539_+|tail	phage tail tape measure protein	tail	Q6DMT2	Streptococcus_phage	78.0	3.5e-259
WP_000589863.1|655535_656261_+	hypothetical protein	NA	Q6DMT1	Streptococcus_phage	58.8	2.1e-82
WP_000966169.1|656260_659176_+|tail	phage tail protein	tail	Q6DMT0	Streptococcus_phage	64.6	0.0e+00
WP_000796404.1|659188_661045_+	hypothetical protein	NA	Q6DMS9	Streptococcus_phage	73.3	2.7e-259
WP_000661349.1|661062_661461_+|holin	phage holin family protein	holin	D0R0E9	Streptococcus_phage	60.8	5.1e-38
WP_000143479.1|661462_662869_+	glucosaminidase domain-containing protein	NA	A0A1B0RXL4	Streptococcus_phage	63.4	3.7e-107
WP_000123549.1|663004_663112_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_000290968.1|663649_664891_+	recombinase family protein	NA	A0A1X9I6J1	Streptococcus_phage	69.5	1.2e-170
WP_001932552.1|664793_666140_+	recombinase family protein	NA	E4ZFN9	Streptococcus_phage	79.1	5.4e-201
WP_000504421.1|666209_666983_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001142755.1|668742_668964_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000757296.1|669081_669819_+	acid phosphatase AphA	NA	NA	NA	NA	NA
WP_001267096.1|670139_670658_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
WP_000944932.1|671494_671827_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
WP_088181595.1|671947_673092_-|transposase	IS3-like element ISSag5 family transposase	transposase	Q8W6R2	Burkholderia_virus	26.1	2.4e-16
>prophage 3
NZ_CP053027	Streptococcus agalactiae strain 01173 chromosome, complete genome	2105299	1552416	1563934	2105299	transposase	Streptococcus_phage(90.91%)	13	NA	NA
WP_000767484.1|1552416_1553244_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	78.0	4.3e-124
WP_000287944.1|1553283_1553640_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	71.8	1.5e-41
WP_000966772.1|1553641_1554118_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.9	7.1e-39
WP_000232156.1|1554172_1555354_-	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	75.6	7.0e-168
WP_001167085.1|1555416_1555965_-	acetyltransferase	NA	M1PSC3	Streptococcus_phage	58.4	1.1e-54
WP_000603277.1|1557257_1557893_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_000425856.1|1558162_1559032_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	70.4	4.9e-110
WP_000358198.1|1559031_1559358_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	61.1	3.2e-30
WP_000364565.1|1559387_1560251_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	49.7	7.3e-74
WP_000715592.1|1560270_1560906_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	61.1	2.8e-67
WP_000160537.1|1561114_1562281_+|transposase	IS30-like element ISSag9 family transposase	transposase	NA	NA	NA	NA
WP_001144248.1|1562545_1563205_-	CBS domain-containing protein	NA	M1NSC5	Streptococcus_phage	55.6	5.2e-64
WP_000178146.1|1563223_1563934_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.5	4.7e-18
>prophage 4
NZ_CP053027	Streptococcus agalactiae strain 01173 chromosome, complete genome	2105299	2050627	2066243	2105299	integrase	Streptococcus_phage(76.92%)	22	2049771:2049790	2063646:2063665
2049771:2049790	attL	AATTAAAGCATTTTGTTGTA	NA	NA	NA	NA
WP_000038827.1|2050627_2051014_-	ArpU family phage encoded transcriptional regulator	NA	A0A141E173	Streptococcus_phage	33.1	1.2e-07
WP_001274639.1|2050988_2051351_-	DUF1492 domain-containing protein	NA	NA	NA	NA	NA
WP_000891150.1|2051754_2052243_-	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	58.0	1.2e-49
WP_000173127.1|2052316_2052862_-	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	57.0	1.2e-26
WP_000838179.1|2053226_2054729_-	DNA primase	NA	Q9AZI5	Lactococcus_phage	36.9	3.5e-63
WP_001029288.1|2054748_2055618_-	primase C-terminal domain-containing protein	NA	A0A1X9I6L2	Streptococcus_phage	71.4	7.7e-116
WP_001100458.1|2055618_2055891_-	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	1.4e-18
WP_000174496.1|2055893_2056223_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000613926.1|2056234_2056429_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000877495.1|2056425_2056758_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000916925.1|2056846_2057299_-	hypothetical protein	NA	A0A1X9I5V7	Streptococcus_phage	34.4	2.0e-06
WP_000074663.1|2057439_2057613_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021393.1|2057714_2058353_-	Bro-N domain-containing protein	NA	NA	NA	NA	NA
WP_001258618.1|2058588_2059191_-	phage repressor protein	NA	A0A1W6JPC3	Staphylococcus_phage	47.2	5.1e-42
WP_000359663.1|2059214_2059415_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001080841.1|2059620_2060235_+	helix-turn-helix transcriptional regulator	NA	A0A1X9I723	Streptococcus_phage	68.7	2.6e-17
WP_000946250.1|2060246_2060534_+	DUF3102 domain-containing protein	NA	A0A286QMZ8	Streptococcus_phage	61.4	1.9e-10
WP_000429451.1|2061071_2062037_+	DUF3644 domain-containing protein	NA	A0A0N9RUA4	Staphylococcus_phage	51.1	7.1e-86
WP_001933204.1|2062374_2063541_+|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	70.1	5.6e-154
WP_000092759.1|2063647_2064259_-	30S ribosomal protein S4	NA	NA	NA	NA	NA
2063646:2063665	attR	AATTAAAGCATTTTGTTGTA	NA	NA	NA	NA
WP_001278152.1|2064588_2064876_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000852645.1|2064887_2066243_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	62.6	1.2e-152
>prophage 5
NZ_CP053027	Streptococcus agalactiae strain 01173 chromosome, complete genome	2105299	2074545	2081749	2105299		uncultured_Caudovirales_phage(16.67%)	8	NA	NA
WP_001042661.1|2074545_2075250_-	transglycosylase SLT domain-containing protein	NA	A0A2H4J6C5	uncultured_Caudovirales_phage	56.6	3.2e-27
WP_000029067.1|2075355_2075895_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	46.4	3.0e-17
WP_000359358.1|2076110_2076905_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000510606.1|2076897_2077740_-	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	28.5	2.0e-15
WP_000181757.1|2077715_2078555_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	30.0	3.5e-20
WP_000239224.1|2078554_2079097_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_000217765.1|2079219_2080503_-	insulinase family protein	NA	A0A2H4UVM3	Bodo_saltans_virus	23.6	1.6e-05
WP_000706190.1|2080504_2081749_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	41.5	1.7e-87
