assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013004125.1_ASM1300412v1	NZ_CP053074	Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88 chromosome, complete genome	1	1146399-1146501	1	CRISPRCasFinder	no	csa3,csn2,cas2,cas1,cas9	cas3,DEDDh,DinG,csm6,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	Type II-B,Type II-C,Type II-A	GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	36	0	0	NA	NA	II-A,II-B	1	1	TypeII-B,TypeII-C,TypeII-A	cas3,DEDDh,DinG,csm6,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	NA,NA|214aa|down_9|NZ_CP053074.1_1158544_1159186_-	NA|270aa|up_9|NZ_CP053074.1_1137455_1138265_-	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]	NA|164aa|up_8|NZ_CP053074.1_1138281_1138773_-	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]	NA|142aa|up_7|NZ_CP053074.1_1138792_1139218_-	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|340aa|up_6|NZ_CP053074.1_1139424_1140444_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|390aa|up_5|NZ_CP053074.1_1140554_1141724_-	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|99aa|up_4|NZ_CP053074.1_1141913_1142210_-	pfam08951, EntA_Immun, Enterocin A Immunity	NA|77aa|up_3|NZ_CP053074.1_1142209_1142440_-	pfam01721, Bacteriocin_II, Class II bacteriocin	NA|146aa|up_2|NZ_CP053074.1_1143310_1143748_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|611aa|up_1|NZ_CP053074.1_1143922_1145755_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|153aa|up_0|NZ_CP053074.1_1145824_1146283_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|369aa|down_0|NZ_CP053074.1_1146568_1147674_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	csn2|221aa|down_1|NZ_CP053074.1_1148747_1149410_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|114aa|down_2|NZ_CP053074.1_1149399_1149741_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|290aa|down_3|NZ_CP053074.1_1149737_1150607_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1372aa|down_4|NZ_CP053074.1_1150606_1154722_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|210aa|down_5|NZ_CP053074.1_1155197_1155827_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|255aa|down_6|NZ_CP053074.1_1155826_1156591_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|251aa|down_7|NZ_CP053074.1_1156590_1157343_-	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism]	NA|377aa|down_8|NZ_CP053074.1_1157352_1158483_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|214aa|down_9|NZ_CP053074.1_1158544_1159186_-	NA
GCF_013004125.1_ASM1300412v1	NZ_CP053074	Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88 chromosome, complete genome	2	1147752-1148645	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	csa3,csn2,cas2,cas1,cas9	cas3,DEDDh,DinG,csm6,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	Type II-B,Type II-C,Type II-A	GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC,GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC,GTTTTGGGACCATTCAAAACAACATAGCTCTAAAAC	36,36,36	0	0	NA	NA	II-A,II-B:II-A,II-B:II-A,II-B	13,13,13	13	TypeII-B,TypeII-C,TypeII-A	cas3,DEDDh,DinG,csm6,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	NA,NA|214aa|down_8|NZ_CP053074.1_1158544_1159186_-	NA|164aa|up_9|NZ_CP053074.1_1138281_1138773_-	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]	NA|142aa|up_8|NZ_CP053074.1_1138792_1139218_-	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|340aa|up_7|NZ_CP053074.1_1139424_1140444_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|390aa|up_6|NZ_CP053074.1_1140554_1141724_-	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|99aa|up_5|NZ_CP053074.1_1141913_1142210_-	pfam08951, EntA_Immun, Enterocin A Immunity	NA|77aa|up_4|NZ_CP053074.1_1142209_1142440_-	pfam01721, Bacteriocin_II, Class II bacteriocin	NA|146aa|up_3|NZ_CP053074.1_1143310_1143748_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|611aa|up_2|NZ_CP053074.1_1143922_1145755_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|153aa|up_1|NZ_CP053074.1_1145824_1146283_-	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|369aa|up_0|NZ_CP053074.1_1146568_1147674_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	csn2|221aa|down_0|NZ_CP053074.1_1148747_1149410_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|114aa|down_1|NZ_CP053074.1_1149399_1149741_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|290aa|down_2|NZ_CP053074.1_1149737_1150607_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1372aa|down_3|NZ_CP053074.1_1150606_1154722_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|210aa|down_4|NZ_CP053074.1_1155197_1155827_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|255aa|down_5|NZ_CP053074.1_1155826_1156591_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|251aa|down_6|NZ_CP053074.1_1156590_1157343_-	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism]	NA|377aa|down_7|NZ_CP053074.1_1157352_1158483_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|214aa|down_8|NZ_CP053074.1_1158544_1159186_-	NA	NA|452aa|down_9|NZ_CP053074.1_1159309_1160665_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional
GCF_013004125.1_ASM1300412v1	NZ_CP053074	Streptococcus dysgalactiae subsp. equisimilis strain TPCH-A88 chromosome, complete genome	3	1502323-1503212	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	cas3,DEDDh,DinG,csm6,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	 Type I-U?,Type I-C,Type I-U	ATTTCAATCCACTCACCCGCGAAGGGTGAGAC,ATTTCAATCCACTCACCCGCGAAGGGTGAGAC,ATTTCAATCCACTCACCCGCGAAGGGTGAGAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	13,13,12	13	TypeI-U?,TypeI-C,TypeI-U	cas3,DEDDh,DinG,csm6,csa3,csn2,cas2,cas1,cas9,cas4,cas7,cas8c,cas5	NA,NA	NA|158aa|up_9|NZ_CP053074.1_1492408_1492882_+	COG1438, ArgR, Arginine repressor [Transcription]	NA|239aa|up_8|NZ_CP053074.1_1493059_1493776_-	COG3382, COG3382, Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [General function prediction only]	NA|360aa|up_7|NZ_CP053074.1_1493789_1494869_-	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|578aa|up_6|NZ_CP053074.1_1494941_1496675_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|247aa|up_5|NZ_CP053074.1_1496671_1497412_-	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|369aa|up_4|NZ_CP053074.1_1497499_1498606_-	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|208aa|up_3|NZ_CP053074.1_1498648_1499272_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|237aa|up_2|NZ_CP053074.1_1499284_1499995_-	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones]	NA|311aa|up_1|NZ_CP053074.1_1500214_1501147_-	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family	NA|320aa|up_0|NZ_CP053074.1_1501238_1502198_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	cas2|98aa|down_0|NZ_CP053074.1_1503360_1503654_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|342aa|down_1|NZ_CP053074.1_1503664_1504690_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|225aa|down_2|NZ_CP053074.1_1504686_1505361_-	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense    mechanisms]	cas7|283aa|down_3|NZ_CP053074.1_1505362_1506211_-	COG3649, COG3649, CRISPR system related protein [Defense mechanisms]	cas8c|632aa|down_4|NZ_CP053074.1_1506215_1508111_-	TIGR01863, CRISPR-associated_protein_CT1133_family, CRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG	cas5|243aa|down_5|NZ_CP053074.1_1508110_1508839_-	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas3|809aa|down_6|NZ_CP053074.1_1508971_1511398_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|378aa|down_7|NZ_CP053074.1_1511574_1512708_-	COG5433, COG5433, Transposase [DNA replication, recombination, and repair]	NA|883aa|down_8|NZ_CP053074.1_1512990_1515639_-	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|188aa|down_9|NZ_CP053074.1_1515640_1516204_-	pfam13238, AAA_18, AAA domain
