The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP046425	Bacteroides dorei strain JR02 chromosome, complete genome	5515594	456019	495369	5515594	transposase,integrase	Croceibacter_phage(25.0%)	45	448275:448289	496878:496892
448275:448289	attL	AATGTGCGTGAACTT	NA	NA	NA	NA
WP_005636919.1|456019_457183_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_170272886.1|457422_458562_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005636926.1|458594_459605_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080707039.1|460161_460548_+	DUF4134 domain-containing protein	NA	NA	NA	NA	NA
WP_005636934.1|460553_460880_+	DUF4133 domain-containing protein	NA	NA	NA	NA	NA
WP_035450349.1|460876_463411_+	TraG family conjugative transposon ATPase	NA	NA	NA	NA	NA
WP_005636939.1|463407_463764_+	DUF3876 domain-containing protein	NA	NA	NA	NA	NA
WP_005636941.1|463760_464390_+	DUF4141 domain-containing protein	NA	NA	NA	NA	NA
WP_005636943.1|464392_465406_+	conjugative transposon protein TraJ	NA	NA	NA	NA	NA
WP_005636947.1|465529_466153_+	conjugative transposon protein TraK	NA	NA	NA	NA	NA
WP_005656892.1|466149_466449_+	DUF3989 domain-containing protein	NA	NA	NA	NA	NA
WP_005636954.1|466399_467707_+	conjugative transposon protein TraM	NA	NA	NA	NA	NA
WP_005636955.1|467756_468671_+	conjugative transposon protein TraN	NA	NA	NA	NA	NA
WP_005636956.1|468667_469255_+	conjugal transfer protein TraO	NA	NA	NA	NA	NA
WP_005636957.1|469276_469738_+	DUF3872 domain-containing protein	NA	NA	NA	NA	NA
WP_005636958.1|469734_470214_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005636594.1|470282_471437_-	hypothetical protein	NA	I6S2L4	Croceibacter_phage	42.2	6.1e-76
WP_005636596.1|471465_472347_-	hypothetical protein	NA	S0A100	Cellulophaga_phage	35.0	3.6e-36
WP_005656889.1|472359_473595_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007851225.1|473627_474368_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
WP_005636601.1|474354_475176_-	DUF4121 family protein	NA	NA	NA	NA	NA
WP_170272867.1|475162_475345_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004312011.1|475666_477340_-|transposase	IS66-like element ISBf10 family transposase	transposase	A0A218MNE7	uncultured_virus	28.9	2.1e-37
WP_004312010.1|477415_477781_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_004319780.1|477784_478141_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
WP_170272868.1|478217_478388_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005942846.1|478669_478960_-	DUF4120 domain-containing protein	NA	NA	NA	NA	NA
WP_005636608.1|479290_479635_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005840921.1|479693_480404_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005636610.1|480405_481107_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008778735.1|481117_482137_-	molecular chaperone DnaJ	NA	NA	NA	NA	NA
WP_005802673.1|482150_482360_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005637786.1|482335_482635_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170272887.1|482631_483231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005864587.1|483278_483776_-	DUF4313 domain-containing protein	NA	NA	NA	NA	NA
WP_005634966.1|483826_484078_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005828696.1|484147_485035_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007851204.1|485038_486181_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005634950.1|486165_486462_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005640474.1|486874_487282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005640472.1|487794_489030_+|transposase	IS4 family transposase	transposase	NA	NA	NA	NA
WP_005828681.1|489103_490309_-|transposase	IS1380 family transposase	transposase	NA	NA	NA	NA
WP_005640468.1|490576_491944_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005640453.1|492665_493955_+|transposase	IS1380-like element ISBvu1 family transposase	transposase	NA	NA	NA	NA
WP_005864602.1|494133_495369_-|integrase	site-specific integrase	integrase	H7BUI8	unidentified_phage	36.3	1.4e-33
496878:496892	attR	AAGTTCACGCACATT	NA	NA	NA	NA
>prophage 2
NZ_CP046425	Bacteroides dorei strain JR02 chromosome, complete genome	5515594	3100532	3136292	5515594	integrase,protease	Helicobacter_phage(33.33%)	37	3099252:3099266	3137455:3137469
3099252:3099266	attL	CACTGAACGCCCTTA	NA	NA	NA	NA
WP_008665036.1|3100532_3101666_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_022219044.1|3101669_3102836_+|integrase	site-specific integrase	integrase	A0A1S5RH00	Helicobacter_phage	23.8	5.2e-06
WP_008665039.1|3103174_3104608_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_008665040.1|3104613_3105234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008665041.1|3105230_3105644_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008665042.1|3105891_3106134_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_008665043.1|3106162_3106636_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157463314.1|3106603_3106837_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157463313.1|3106872_3107544_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022219048.1|3107533_3108751_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008665046.1|3108761_3109340_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082431359.1|3110115_3110463_+	PcfJ domain-containing protein	NA	NA	NA	NA	NA
WP_005807974.1|3110351_3110648_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008665050.1|3110654_3111416_-|protease	serine protease	protease	NA	NA	NA	NA
WP_005807978.1|3111417_3112065_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008665053.1|3112070_3113711_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005807981.1|3113714_3114533_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005807983.1|3114536_3115400_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005807985.1|3115392_3118875_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005807987.1|3118877_3120296_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005807989.1|3120307_3120724_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005807991.1|3120725_3121907_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005807993.1|3121932_3122667_-	UpxY family transcription antiterminator	NA	NA	NA	NA	NA
WP_007219414.1|3123468_3123720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004289359.1|3125583_3125751_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004289356.1|3126164_3126680_+	DUF4313 domain-containing protein	NA	NA	NA	NA	NA
WP_170273017.1|3126806_3127061_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170272952.1|3127836_3129135_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_004289352.1|3129131_3129446_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_005776149.1|3129815_3130013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008666811.1|3130024_3130297_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004289349.1|3130307_3130580_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004289348.1|3130620_3130998_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004289347.1|3131233_3131419_+	hypothetical protein	NA	NA	NA	NA	NA
WP_149941956.1|3132728_3134342_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A142F1N9	Bacillus_phage	22.1	6.7e-12
WP_154577496.1|3134344_3135286_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_149941957.1|3135278_3136292_+|integrase	tyrosine-type recombinase/integrase	integrase	S6C485	Thermus_phage	23.2	2.0e-06
3137455:3137469	attR	TAAGGGCGTTCAGTG	NA	NA	NA	NA
>prophage 3
NZ_CP046425	Bacteroides dorei strain JR02 chromosome, complete genome	5515594	3326721	3356455	5515594	transposase,integrase,tRNA	unidentified_phage(44.44%)	38	3334103:3334116	3360472:3360485
WP_032536584.1|3326721_3327702_-|transposase	IS982-like element IS1187 family transposase	transposase	NA	NA	NA	NA
WP_087336888.1|3327792_3329022_-|integrase	site-specific integrase	integrase	H7BUI8	unidentified_phage	36.3	1.5e-32
WP_132040141.1|3329050_3329293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_132040699.1|3329685_3330045_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_132040139.1|3330034_3332077_+	bifunctional DNA primase/helicase	NA	NA	NA	NA	NA
WP_132040137.1|3332089_3332443_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_132040135.1|3332974_3334300_+	AAA family ATPase	NA	NA	NA	NA	NA
3334103:3334116	attL	AAGAATAATAAAGA	NA	NA	NA	NA
WP_170272960.1|3334330_3335614_+	serine/threonine protein kinase	NA	I6PD73	Cronobacter_phage	30.4	1.6e-16
WP_132040697.1|3335703_3335850_-	DNA methylase	NA	NA	NA	NA	NA
WP_132040131.1|3336198_3336666_+	TraG family conjugative transposon ATPase	NA	NA	NA	NA	NA
WP_132040129.1|3336671_3336944_+	DUF3876 domain-containing protein	NA	NA	NA	NA	NA
WP_170272961.1|3337027_3337261_+	DUF4141 domain-containing protein	NA	NA	NA	NA	NA
WP_162614061.1|3337300_3337462_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032535361.1|3337811_3339617_+	maturase	NA	A0A0U4J920	Pseudomonas_phage	29.7	5.0e-32
WP_170272962.1|3339609_3340146_+	conjugal transfer protein TraI	NA	NA	NA	NA	NA
WP_132040125.1|3340147_3341155_+	conjugative transposon protein TraJ	NA	NA	NA	NA	NA
WP_132040123.1|3341184_3341808_+	conjugative transposon protein TraK	NA	NA	NA	NA	NA
WP_132040121.1|3342093_3343416_+	conjugative transposon protein TraM	NA	NA	NA	NA	NA
WP_132040695.1|3343463_3344474_+	conjugative transposon protein TraN	NA	NA	NA	NA	NA
WP_170272963.1|3344475_3345060_+	conjugal transfer protein TraO	NA	NA	NA	NA	NA
WP_132040119.1|3345063_3345945_+	DNA (cytosine-5-)-methyltransferase	NA	A0A1B1IVS4	uncultured_Mediterranean_phage	41.3	3.4e-34
WP_132040117.1|3345959_3346403_+	DUF3872 domain-containing protein	NA	NA	NA	NA	NA
WP_132040115.1|3346399_3346969_+|tRNA	tRNA (adenine-N(6)-)-methyltransferase	tRNA	A0A0K0KVF7	Prochlorococcus_phage	50.9	4.2e-46
WP_132040113.1|3347086_3347311_-	DUF3873 family protein	NA	NA	NA	NA	NA
WP_132040111.1|3347339_3347927_-	hypothetical protein	NA	NA	NA	NA	NA
WP_132040109.1|3347946_3348204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_132040107.1|3348222_3348441_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170272964.1|3348447_3348936_-	DUF1273 family protein	NA	A0A1P8L625	Pectobacterium_phage	35.1	1.1e-13
WP_132040103.1|3348947_3349211_-	hypothetical protein	NA	NA	NA	NA	NA
WP_132040101.1|3349786_3350059_+	hypothetical protein	NA	NA	NA	NA	NA
WP_132040097.1|3350647_3350839_+	hypothetical protein	NA	NA	NA	NA	NA
WP_132040093.1|3351077_3351416_-	hypothetical protein	NA	NA	NA	NA	NA
WP_132040091.1|3351418_3352336_-	ribonucleotide-diphosphate reductase subunit beta	NA	NA	NA	NA	NA
WP_132040089.1|3352419_3352833_-	hypothetical protein	NA	NA	NA	NA	NA
WP_170272965.1|3352871_3353489_-|integrase	integrase catalytic domain-containing protein	integrase	NA	NA	NA	NA
WP_132040085.1|3353506_3353761_-|integrase	tyrosine-type recombinase/integrase	integrase	H7BUI8	unidentified_phage	51.5	3.1e-09
WP_007831920.1|3353988_3355218_+|integrase	site-specific integrase	integrase	H7BUI8	unidentified_phage	31.1	2.9e-23
WP_132040083.1|3355237_3356455_+|integrase	site-specific integrase	integrase	H7BUI8	unidentified_phage	26.9	1.1e-14
3360472:3360485	attR	AAGAATAATAAAGA	NA	NA	NA	NA
>prophage 4
NZ_CP046425	Bacteroides dorei strain JR02 chromosome, complete genome	5515594	4698387	4770603	5515594	integrase	Bacillus_phage(33.33%)	48	4698275:4698334	4771663:4772781
4698275:4698334	attL	AAGCTCATATGTTGCGTAGCCATTTATGTTGGCTTCCAACTCTAATCCTTTGTATATAAA	NA	NA	NA	NA
WP_149941957.1|4698387_4699401_-|integrase	tyrosine-type recombinase/integrase	integrase	S6C485	Thermus_phage	23.2	2.0e-06
WP_154577496.1|4699393_4700335_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_149941956.1|4700337_4701951_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A142F1N9	Bacillus_phage	22.1	6.7e-12
WP_007840925.1|4702418_4705589_+	SusC/RagA family TonB-linked outer membrane protein	NA	NA	NA	NA	NA
WP_007832961.1|4705608_4707564_+	SusD/RagB family nutrient-binding outer membrane lipoprotein	NA	NA	NA	NA	NA
WP_008654582.1|4708946_4712102_+	SusC/RagA family TonB-linked outer membrane protein	NA	NA	NA	NA	NA
WP_005841087.1|4712123_4714094_+	SusD/RagB family nutrient-binding outer membrane lipoprotein	NA	NA	NA	NA	NA
WP_005841085.1|4714405_4714870_-	hypothetical protein	NA	NA	NA	NA	NA
WP_007832955.1|4714914_4716567_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.9	8.8e-60
WP_007832953.1|4716651_4717206_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_087338733.1|4717452_4717944_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_087338730.1|4718204_4718621_-	DUF1893 domain-containing protein	NA	NA	NA	NA	NA
WP_087338728.1|4718633_4720160_-	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_007832943.1|4721756_4722653_-	alkaline phosphatase	NA	NA	NA	NA	NA
WP_007832942.1|4722924_4723698_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
WP_007832940.1|4723882_4725007_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_005841042.1|4725020_4725989_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
WP_007832937.1|4725994_4727203_-	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_007832935.1|4727310_4727868_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_007832933.1|4727891_4728368_-	arginine repressor	NA	NA	NA	NA	NA
WP_007832931.1|4728675_4730154_+	rhamnulokinase	NA	NA	NA	NA	NA
WP_085930143.1|4730193_4731450_+	L-rhamnose isomerase	NA	NA	NA	NA	NA
WP_007832930.1|4731543_4732563_+	L-rhamnose/proton symporter RhaT	NA	NA	NA	NA	NA
WP_008654569.1|4732648_4733458_+	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA	NA
WP_007832928.1|4733816_4734314_+	DUF4251 domain-containing protein	NA	NA	NA	NA	NA
WP_007832927.1|4734414_4735929_-	right-handed parallel beta-helix repeat-containing protein	NA	NA	NA	NA	NA
WP_007841057.1|4736096_4737716_-	RagB/SusD family nutrient uptake outer membrane protein	NA	NA	NA	NA	NA
WP_008654568.1|4737727_4740799_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_007832924.1|4740939_4745100_-	response regulator	NA	W8CYM9	Bacillus_phage	32.5	2.2e-11
WP_007832923.1|4745247_4746168_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_007855245.1|4746175_4747174_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_008654565.1|4747199_4748057_-	ion transporter	NA	NA	NA	NA	NA
WP_008654564.1|4748172_4751268_+	DUF4981 domain-containing protein	NA	L0N6M2	Herpes_simplex_virus	34.3	5.5e-148
WP_087338725.1|4751667_4754235_+	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_087338722.1|4754289_4754817_+	RNA polymerase sigma-70 factor	NA	NA	NA	NA	NA
WP_087338720.1|4754813_4755824_+	FecR domain-containing protein	NA	NA	NA	NA	NA
WP_007832913.1|4755945_4757187_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_008672805.1|4757389_4757611_+|integrase	phage integrase SAM-like domain-containing protein	integrase	NA	NA	NA	NA
WP_007832909.1|4757680_4758610_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_087338718.1|4758633_4759482_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	42.9	7.2e-50
WP_007848826.1|4759525_4760389_+	aldo/keto reductase	NA	A0A1V0SKP9	Klosneuvirus	27.9	9.3e-29
WP_007832903.1|4760395_4761145_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.8	1.9e-22
WP_087338740.1|4761171_4761729_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_007832896.1|4762341_4763343_-	glycosidase	NA	NA	NA	NA	NA
WP_007841087.1|4763375_4764674_-	MFS transporter	NA	NA	NA	NA	NA
WP_007832894.1|4764797_4766813_-	glycoside hydrolase family 97 protein	NA	NA	NA	NA	NA
WP_149941956.1|4768045_4769659_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A142F1N9	Bacillus_phage	22.1	6.7e-12
WP_154577496.1|4769661_4770603_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
4771663:4772781	attR	TTTATATACAAAGGATTAGAGTTGGAAGCCAACATAAATGGCTACGCAACATATGAGCTTAAATCCGGAAAATTCCGCACTTCTTATTTGGGGCAGTTGAATACTTATCTATCCGCTTTAGATACATATATCAGAAAACCGCACGAAAACCCTTCTATCGGAATAATTCTTTGCAAAGAAATGAACCAAACCTTTGTAGAGTTTGCCGTTCGTGATTATAACAAGCCGATGGGAGTTGCCACTTACCGTGCATCTAAAGATATGCCGGAACGACTTCGTAACGCTCTGCCAAACATTGAAGATTTGAAAAAGTTATTGTAATACAAACGCCGATAAAGCCCTTTTAAAGACTCTACCGGCGTAAGTTCACCTATTAAAAAAATCAGAATTCCAAGTCAGCCAACTGAGGATTATGATCGGAAAGCAAAGCTTCCGGTACTTCAGCCGGTATCTCACAGTTCTTTACCAGAACTTGCGGAGTGACAAAGATGAAATCAATCTTTTCACAATCCTCGGCCGGAATACGGGCAAAATCATGAAAAGTATAATCAACGCCGGTCACACGGGCAGCCGTCTTATAAGCATCCTTCATCACAAACTCGTTGGTAGTAATCGTTTCGTATGCATCGCTCGCATCGGTCACATTAAAGTCACCCGTAACCACTGCGGGGCGTTCGCCTACGATCTCTTTTATCTTACGGATAATGAGCAATGCGCTTTGACGGCGAGCCTCTTCACCTACATGGTCAAAATGAGTATTGACAGCCATGAATATCTTTCCGGTGGCCTTGTCTTTAAATTTCGCCCAAGTGGCGATACGGACACAAACCGCATCCCATCCCATCATTCCTACGCTATCGGGATTTTCGGCCAACCAGAAAGTATTGGAGTCCAACACCTCATATTTGTCCTTACGATAGAATAGCGGCGCATATTCACCTGCTGTCTTCCCGTCATCACGTCCCACGCCGATACCATCGTATTCGGGCAAGCCTGCACGAAGATCCTGAAATTGGTTATGCAAAACTTCCTGCATACCGACAATATCCAGTTCACGGTCCTTAATAAACTGGCACACACGGTCTTTCCGATATTGCCAATTGTTCAAACTGTCTTGCG	NA	NA	NA	NA
