assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013085185.1_ASM1308518v1	NZ_CP053234	Escherichia coli strain SCU-106 chromosome, complete genome	1	1340188-1340311	1	CRISPRCasFinder	no	DEDDh	DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT	NA,NA|30aa|down_7|NZ_CP053234.1_1349207_1349297_+	NA|471aa|up_9|NZ_CP053234.1_1329641_1331054_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP053234.1_1331610_1331820_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP053234.1_1332275_1332902_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP053234.1_1332922_1335025_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP053234.1_1335037_1335676_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP053234.1_1335739_1336408_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP053234.1_1336404_1337190_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP053234.1_1337193_1338006_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP053234.1_1338017_1339622_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP053234.1_1339747_1340053_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP053234.1_1340625_1341882_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP053234.1_1341922_1343296_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP053234.1_1343510_1344152_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP053234.1_1344191_1345340_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP053234.1_1345630_1346842_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP053234.1_1346954_1347887_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP053234.1_1347883_1348909_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP053234.1_1349207_1349297_+	NA	NA|390aa|down_8|NZ_CP053234.1_1349462_1350632_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP053234.1_1350777_1351359_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_013085185.1_ASM1308518v1	NZ_CP053234	Escherichia coli strain SCU-106 chromosome, complete genome	2	1776516-1776651	1	PILER-CR	no		DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TTAATCACCAATATTGAAAA	20	0	0	NA	NA	NA	2	2	Orphan	DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT	NA,NA	NA|126aa|up_9|NZ_CP053234.1_1767223_1767601_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed	NA|281aa|up_8|NZ_CP053234.1_1767607_1768450_+	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA|160aa|up_7|NZ_CP053234.1_1768527_1769007_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP053234.1_1769198_1771061_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP053234.1_1771053_1771584_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP053234.1_1771691_1773023_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP053234.1_1773080_1773368_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP053234.1_1773364_1774651_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP053234.1_1774701_1775643_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP053234.1_1775657_1776428_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP053234.1_1776901_1778416_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP053234.1_1778446_1779589_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP053234.1_1779717_1780935_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP053234.1_1781008_1782562_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP053234.1_1782670_1783456_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP053234.1_1783461_1784052_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP053234.1_1784137_1784533_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|NZ_CP053234.1_1784793_1788015_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP053234.1_1788032_1789181_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP053234.1_1789636_1790458_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
GCF_013085185.1_ASM1308518v1	NZ_CP053234	Escherichia coli strain SCU-106 chromosome, complete genome	3	2116623-2116707	2	CRISPRCasFinder	no		DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	CCACCCGAAGGCGCTCCTCACAGG	24	1	1	2116647-2116683	NZ_CP053234.1_2146698-2146734	NA	1	1	Orphan	DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT	NA|229aa|up_9|NZ_CP053234.1_2110394_2111081_-,NA|113aa|up_6|NZ_CP053234.1_2112769_2113108_-,NA|120aa|up_5|NZ_CP053234.1_2113175_2113535_-,NA|46aa|up_3|NZ_CP053234.1_2114721_2114859_-,NA|160aa|up_2|NZ_CP053234.1_2114836_2115316_-,NA|127aa|up_1|NZ_CP053234.1_2115416_2115797_-,NA|134aa|up_0|NZ_CP053234.1_2115961_2116363_-,NA|89aa|down_2|NZ_CP053234.1_2119290_2119557_+,NA|224aa|down_3|NZ_CP053234.1_2119738_2120410_+,NA|95aa|down_6|NZ_CP053234.1_2122164_2122449_+,NA|122aa|down_8|NZ_CP053234.1_2124000_2124366_-	NA|229aa|up_9|NZ_CP053234.1_2110394_2111081_-	NA	NA|316aa|up_8|NZ_CP053234.1_2111203_2112151_-	pfam06924, DUF1281, Protein of unknown function (DUF1281)	NA|145aa|up_7|NZ_CP053234.1_2112258_2112693_-	pfam18847, LPD29, Large polyvalent protein associated domain 29	NA|113aa|up_6|NZ_CP053234.1_2112769_2113108_-	NA	NA|120aa|up_5|NZ_CP053234.1_2113175_2113535_-	NA	NA|328aa|up_4|NZ_CP053234.1_2113645_2114629_-	COG4227, COG4227, Antirestriction protein [DNA replication, recombination, and repair]	NA|46aa|up_3|NZ_CP053234.1_2114721_2114859_-	NA	NA|160aa|up_2|NZ_CP053234.1_2114836_2115316_-	NA	NA|127aa|up_1|NZ_CP053234.1_2115416_2115797_-	NA	NA|134aa|up_0|NZ_CP053234.1_2115961_2116363_-	NA	NA|244aa|down_0|NZ_CP053234.1_2116894_2117626_+	pfam11672, DUF3268, zinc-finger-containing domain	NA|306aa|down_1|NZ_CP053234.1_2117629_2118547_-	pfam12835, Integrase_1, Integrase	NA|89aa|down_2|NZ_CP053234.1_2119290_2119557_+	NA	NA|224aa|down_3|NZ_CP053234.1_2119738_2120410_+	NA	NA|47aa|down_4|NZ_CP053234.1_2121284_2121425_-	PRK09759, PRK09759, type I toxin-antitoxin system toxin HokA	NA|96aa|down_5|NZ_CP053234.1_2121726_2122014_-	PRK01678, rpmE2, type B 50S ribosomal protein L31	NA|95aa|down_6|NZ_CP053234.1_2122164_2122449_+	NA	NA|501aa|down_7|NZ_CP053234.1_2122494_2123997_-	pfam07916, TraG_N, TraG-like protein, N-terminal region	NA|122aa|down_8|NZ_CP053234.1_2124000_2124366_-	NA	NA|474aa|down_9|NZ_CP053234.1_2124358_2125780_-	TIGR03755, conj_TIGR03755, integrating conjugative element protein, PFL_4711 family
GCF_013085185.1_ASM1308518v1	NZ_CP053234	Escherichia coli strain SCU-106 chromosome, complete genome	4	2119418-2119502	3	CRISPRCasFinder	no		DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	CCACCCGAAGGCGCTCCTCACAGG	24	1	1	2119442-2119478	NZ_CP053234.1_2146698-2146734	NA	1	1	Orphan	DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT	NA|113aa|up_8|NZ_CP053234.1_2112769_2113108_-,NA|120aa|up_7|NZ_CP053234.1_2113175_2113535_-,NA|46aa|up_5|NZ_CP053234.1_2114721_2114859_-,NA|160aa|up_4|NZ_CP053234.1_2114836_2115316_-,NA|127aa|up_3|NZ_CP053234.1_2115416_2115797_-,NA|134aa|up_2|NZ_CP053234.1_2115961_2116363_-,NA|224aa|down_0|NZ_CP053234.1_2119738_2120410_+,NA|95aa|down_3|NZ_CP053234.1_2122164_2122449_+,NA|122aa|down_5|NZ_CP053234.1_2124000_2124366_-,NA|129aa|down_9|NZ_CP053234.1_2127425_2127812_-	NA|145aa|up_9|NZ_CP053234.1_2112258_2112693_-	pfam18847, LPD29, Large polyvalent protein associated domain 29	NA|113aa|up_8|NZ_CP053234.1_2112769_2113108_-	NA	NA|120aa|up_7|NZ_CP053234.1_2113175_2113535_-	NA	NA|328aa|up_6|NZ_CP053234.1_2113645_2114629_-	COG4227, COG4227, Antirestriction protein [DNA replication, recombination, and repair]	NA|46aa|up_5|NZ_CP053234.1_2114721_2114859_-	NA	NA|160aa|up_4|NZ_CP053234.1_2114836_2115316_-	NA	NA|127aa|up_3|NZ_CP053234.1_2115416_2115797_-	NA	NA|134aa|up_2|NZ_CP053234.1_2115961_2116363_-	NA	NA|244aa|up_1|NZ_CP053234.1_2116894_2117626_+	pfam11672, DUF3268, zinc-finger-containing domain	NA|306aa|up_0|NZ_CP053234.1_2117629_2118547_-	pfam12835, Integrase_1, Integrase	NA|224aa|down_0|NZ_CP053234.1_2119738_2120410_+	NA	NA|47aa|down_1|NZ_CP053234.1_2121284_2121425_-	PRK09759, PRK09759, type I toxin-antitoxin system toxin HokA	NA|96aa|down_2|NZ_CP053234.1_2121726_2122014_-	PRK01678, rpmE2, type B 50S ribosomal protein L31	NA|95aa|down_3|NZ_CP053234.1_2122164_2122449_+	NA	NA|501aa|down_4|NZ_CP053234.1_2122494_2123997_-	pfam07916, TraG_N, TraG-like protein, N-terminal region	NA|122aa|down_5|NZ_CP053234.1_2124000_2124366_-	NA	NA|474aa|down_6|NZ_CP053234.1_2124358_2125780_-	TIGR03755, conj_TIGR03755, integrating conjugative element protein, PFL_4711 family	NA|325aa|down_7|NZ_CP053234.1_2125791_2126766_-	TIGR03756, conj_TIGR03756, integrating conjugative element protein, PFL_4710 family	NA|133aa|down_8|NZ_CP053234.1_2126762_2127161_-	TIGR03757, conj_TIGR03757, integrating conjugative element protein, PFL_4709 family	NA|129aa|down_9|NZ_CP053234.1_2127425_2127812_-	NA
GCF_013085185.1_ASM1308518v1	NZ_CP053234	Escherichia coli strain SCU-106 chromosome, complete genome	5	3359305-3359422	4	CRISPRCasFinder	no		DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	40	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT	NA,NA|55aa|down_0|NZ_CP053234.1_3359495_3359660_-	NA|115aa|up_9|NZ_CP053234.1_3347026_3347371_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|up_8|NZ_CP053234.1_3347559_3348498_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|up_7|NZ_CP053234.1_3348596_3349586_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|up_6|NZ_CP053234.1_3349607_3350939_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|up_5|NZ_CP053234.1_3350964_3352173_+	PRK12379, PRK12379, propionate kinase	NA|765aa|up_4|NZ_CP053234.1_3352206_3354501_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|up_3|NZ_CP053234.1_3354514_3354904_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|up_2|NZ_CP053234.1_3354975_3356340_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|up_1|NZ_CP053234.1_3356614_3357946_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|437aa|up_0|NZ_CP053234.1_3357973_3359284_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|55aa|down_0|NZ_CP053234.1_3359495_3359660_-	NA	NA|234aa|down_1|NZ_CP053234.1_3359682_3360384_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|299aa|down_2|NZ_CP053234.1_3360488_3361385_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|119aa|down_3|NZ_CP053234.1_3361435_3361792_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|122aa|down_4|NZ_CP053234.1_3362033_3362399_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|329aa|down_5|NZ_CP053234.1_3362691_3363678_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|161aa|down_6|NZ_CP053234.1_3363747_3364230_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|100aa|down_7|NZ_CP053234.1_3364325_3364625_-	pfam13997, YqjK, YqjK-like protein	NA|135aa|down_8|NZ_CP053234.1_3364614_3365019_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_9|NZ_CP053234.1_3365021_3365327_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]
GCF_013085185.1_ASM1308518v1	NZ_CP053234	Escherichia coli strain SCU-106 chromosome, complete genome	6	3836418-3837300	2,5,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29	0	0	NA	NA	I-E:I-E:I-E	14,14,14	14	TypeI-E	DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT	NA|121aa|up_3|NZ_CP053234.1_3833314_3833677_-,NA	NA|745aa|up_9|NZ_CP053234.1_3826250_3828485_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_8|NZ_CP053234.1_3828562_3828811_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_7|NZ_CP053234.1_3828810_3829146_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_6|NZ_CP053234.1_3829216_3830008_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_5|NZ_CP053234.1_3830235_3831873_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_4|NZ_CP053234.1_3831960_3833259_+	PRK00077, eno, enolase; Provisional	NA|121aa|up_3|NZ_CP053234.1_3833314_3833677_-	NA	NA|302aa|up_2|NZ_CP053234.1_3833712_3834618_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|201aa|up_1|NZ_CP053234.1_3834631_3835234_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|224aa|up_0|NZ_CP053234.1_3835406_3836078_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|185aa|down_0|NZ_CP053234.1_3837938_3838493_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|121aa|down_1|NZ_CP053234.1_3838532_3838895_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_2|NZ_CP053234.1_3839213_3841013_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_3|NZ_CP053234.1_3841012_3842725_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|down_4|NZ_CP053234.1_3842798_3843533_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|down_5|NZ_CP053234.1_3843797_3843950_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|down_6|NZ_CP053234.1_3844143_3846843_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|down_7|NZ_CP053234.1_3846940_3848503_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|down_8|NZ_CP053234.1_3848499_3849036_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|down_9|NZ_CP053234.1_3849050_3850106_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI
GCF_013085185.1_ASM1308518v1	NZ_CP053234	Escherichia coli strain SCU-106 chromosome, complete genome	7	3852802-3853319	3,6,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	8,8,8	8	TypeI-E	DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT	NA,NA	NA|245aa|up_9|NZ_CP053234.1_3842798_3843533_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP053234.1_3843797_3843950_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP053234.1_3844143_3846843_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP053234.1_3846940_3848503_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP053234.1_3848499_3849036_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|352aa|up_4|NZ_CP053234.1_3849050_3850106_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP053234.1_3850116_3850863_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP053234.1_3850844_3851495_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP053234.1_3851491_3852415_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP053234.1_3852411_3852705_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP053234.1_3853401_3854439_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP053234.1_3854690_3855599_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP053234.1_3855600_3857028_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP053234.1_3857027_3857633_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP053234.1_3857682_3858006_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP053234.1_3858199_3858511_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP053234.1_3858529_3859240_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP053234.1_3859239_3859719_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP053234.1_3859715_3860765_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP053234.1_3860745_3861507_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_013085185.1_ASM1308518v1	NZ_CP053234	Escherichia coli strain SCU-106 chromosome, complete genome	8	3898812-3898954	7	CRISPRCasFinder	no		DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GGATAAGACGCGCCAGCGTCGCATCCGACATTTTGGGCACAGTAG	45	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,RT	NA,NA	NA|570aa|up_9|NZ_CP053234.1_3887435_3889145_+	COG3261, HycE, Ni,Fe-hydrogenase III large subunit [Energy production and conversion]	NA|181aa|up_8|NZ_CP053234.1_3889154_3889697_+	PRK12387, PRK12387, formate hydrogenlyase complex iron-sulfur subunit; Provisional	NA|256aa|up_7|NZ_CP053234.1_3889696_3890464_+	COG3260, COG3260, Ni,Fe-hydrogenase III small subunit [Energy production and conversion]	NA|137aa|up_6|NZ_CP053234.1_3890460_3890871_+	PRK15084, PRK15084, formate hydrogenlyase maturation protein HycH; Provisional	NA|157aa|up_5|NZ_CP053234.1_3890863_3891334_+	PRK11544, hycI, hydrogenase 3 maturation protease; Provisional	NA|475aa|up_4|NZ_CP053234.1_3891492_3892917_-	PRK09852, PRK09852, cryptic 6-phospho-beta-glucosidase; Provisional	NA|486aa|up_3|NZ_CP053234.1_3892925_3894383_-	PRK09796, PRK09796, PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional	NA|337aa|up_2|NZ_CP053234.1_3894642_3895653_+	cd06270, PBP1_GalS-like, ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism	NA|176aa|up_1|NZ_CP053234.1_3895801_3896329_+	PRK10330, PRK10330, electron transport protein HydN	NA|751aa|up_0|NZ_CP053234.1_3896481_3898734_+	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]	NA|378aa|down_0|NZ_CP053234.1_3898959_3900093_-	PRK04965, PRK04965, NADH:flavorubredoxin reductase NorW	NA|480aa|down_1|NZ_CP053234.1_3900089_3901529_-	PRK05452, PRK05452, anaerobic nitric oxide reductase flavorubredoxin; Provisional	NA|505aa|down_2|NZ_CP053234.1_3901715_3903230_+	PRK05022, PRK05022, nitric oxide reductase transcriptional regulator NorR	NA|322aa|down_3|NZ_CP053234.1_3903226_3904192_-	PRK11543, gutQ, arabinose-5-phosphate isomerase GutQ	NA|258aa|down_4|NZ_CP053234.1_3904184_3904958_-	PRK10434, srlR, DNA-binding transcriptional repressor	NA|120aa|down_5|NZ_CP053234.1_3905024_3905384_-	PRK10234, PRK10234, transcriptional regulator GutM	NA|260aa|down_6|NZ_CP053234.1_3905488_3906268_-	PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional	NA|124aa|down_7|NZ_CP053234.1_3906271_3906643_-	PRK10377, PRK10377, PTS glucitol/sorbitol transporter subunit IIA	NA|320aa|down_8|NZ_CP053234.1_3906653_3907613_-	TIGR00825, EIIBC-GUT, PTS system, glucitol/sorbitol-specific, IIBC component	NA|188aa|down_9|NZ_CP053234.1_3907609_3908173_-	TIGR00821, Glucitol/sorbitol_permease_IIC_component, PTS system, glucitol/sorbitol-specific, IIC component
