assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013085545.1_ASM1308554v1	NZ_CP039543	Desulfovibrio marinus strain CS1 chromosome, complete genome	1	241313-241514	1	CRISPRCasFinder	no	csa3	csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas4,cas8c	Type I-A	ACGCTGTCCGGGGCTGTGAGCGCCACGAGTACCG	34	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas4,cas8c	NA,NA|170aa|down_7|NZ_CP039543.1_253514_254024_-,NA|174aa|down_8|NZ_CP039543.1_254159_254681_-	NA|322aa|up_9|NZ_CP039543.1_227497_228463_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|261aa|up_8|NZ_CP039543.1_228462_229245_-	cd01714, ETF_beta, The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases	NA|716aa|up_7|NZ_CP039543.1_229247_231395_-	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|395aa|up_6|NZ_CP039543.1_231637_232822_-	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|477aa|up_5|NZ_CP039543.1_232852_234283_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|201aa|up_4|NZ_CP039543.1_234420_235023_-	COG1584, COG1584, Predicted membrane protein [Function unknown]	csa3|96aa|up_3|NZ_CP039543.1_235988_236276_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_2|NZ_CP039543.1_236561_237542_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|246aa|up_1|NZ_CP039543.1_237538_238276_+	pfam01061, ABC2_membrane, ABC-2 type transporter	NA|484aa|up_0|NZ_CP039543.1_238847_240299_+	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase	NA|661aa|down_0|NZ_CP039543.1_244347_246330_-	pfam02743, dCache_1, Cache domain	NA|101aa|down_1|NZ_CP039543.1_246804_247107_-	COG1359, COG1359, Uncharacterized conserved protein [Function unknown]	NA|279aa|down_2|NZ_CP039543.1_247577_248414_-	cd02143, nitroreductase_FeS-like, nitroreductases with an N-terminal iron-sulfur cluster-binding domain	NA|197aa|down_3|NZ_CP039543.1_248571_249162_+	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal	NA|475aa|down_4|NZ_CP039543.1_249258_250683_-	COG1966, CstA, Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms]	NA|589aa|down_5|NZ_CP039543.1_250821_252588_-	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|268aa|down_6|NZ_CP039543.1_252601_253405_-	cd17532, REC_LytTR_AlgR-like, phosphoacceptor receiver (REC) domain of LytTR/AlgR family response regulators similar to AlgR	NA|170aa|down_7|NZ_CP039543.1_253514_254024_-	NA	NA|174aa|down_8|NZ_CP039543.1_254159_254681_-	NA	NA|158aa|down_9|NZ_CP039543.1_254975_255449_-	cd00038, CAP_ED, effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor
GCF_013085545.1_ASM1308554v1	NZ_CP039543	Desulfovibrio marinus strain CS1 chromosome, complete genome	2	762776-765431	1,2,1,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas4,cas8c	Type I-E	GTGTTCCCCGCGCCTGCGGGGATGAACCG,GTGTTCCCCGCGCCTGCGGGGATGAACCG,GTGTTCCCCGCGCCTGCGGGGATGAACCG,GTGTTCCCCGCGCCTGCGGGGATGAACCG,GTGTTCCCCGCGCCCGCGGGGATGAACCG	29,29,29,29,29	0	0	NA	NA	I-E:I-E:I-E:I-E:I-E	41,43,43,41,41	43	TypeI-E	csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas4,cas8c	NA,NA|431aa|down_0|NZ_CP039543.1_766501_767794_-,NA|80aa|down_2|NZ_CP039543.1_768896_769136_-	NA|457aa|up_9|NZ_CP039543.1_751469_752840_+	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|164aa|up_8|NZ_CP039543.1_752897_753389_-	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms]	cas3|887aa|up_7|NZ_CP039543.1_754006_756667_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|526aa|up_6|NZ_CP039543.1_756817_758395_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|165aa|up_5|NZ_CP039543.1_758391_758886_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|391aa|up_4|NZ_CP039543.1_758913_760086_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|246aa|up_3|NZ_CP039543.1_760088_760826_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|218aa|up_2|NZ_CP039543.1_760836_761490_+	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas1|304aa|up_1|NZ_CP039543.1_761489_762401_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|110aa|up_0|NZ_CP039543.1_762381_762711_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|431aa|down_0|NZ_CP039543.1_766501_767794_-	NA	NA|349aa|down_1|NZ_CP039543.1_767822_768869_-	smart01040, Bro-N, BRO family, N-terminal domain	NA|80aa|down_2|NZ_CP039543.1_768896_769136_-	NA	NA|197aa|down_3|NZ_CP039543.1_769666_770257_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|144aa|down_4|NZ_CP039543.1_772822_773254_-	PRK10860, PRK10860, tRNA-specific adenosine deaminase; Provisional	NA|274aa|down_5|NZ_CP039543.1_773370_774192_-	pfam13507, GATase_5, CobB/CobQ-like glutamine amidotransferase domain	NA|544aa|down_6|NZ_CP039543.1_774557_776189_+	PRK05380, pyrG, CTP synthetase; Validated	NA|191aa|down_7|NZ_CP039543.1_776230_776803_+	COG1778, COG1778, Low specificity phosphatase (HAD superfamily) [General function prediction only]	NA|472aa|down_8|NZ_CP039543.1_777102_778518_+	PRK05932, PRK05932, RNA polymerase factor sigma-54; Reviewed	NA|182aa|down_9|NZ_CP039543.1_778556_779102_+	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY,  is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site
GCF_013085545.1_ASM1308554v1	NZ_CP039543	Desulfovibrio marinus strain CS1 chromosome, complete genome	3	1966697-1966829	3	CRISPRCasFinder	no		csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas4,cas8c	Orphan	TTCCCGCTCCTCCGGCGTCATCTTC	25	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas4,cas8c	NA|100aa|up_9|NZ_CP039543.1_1948633_1948933_+,NA|141aa|up_7|NZ_CP039543.1_1950057_1950480_+,NA|82aa|up_5|NZ_CP039543.1_1950866_1951112_+,NA|158aa|down_0|NZ_CP039543.1_1967139_1967613_-,NA|99aa|down_2|NZ_CP039543.1_1968285_1968582_+	NA|100aa|up_9|NZ_CP039543.1_1948633_1948933_+	NA	NA|355aa|up_8|NZ_CP039543.1_1948978_1950043_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|141aa|up_7|NZ_CP039543.1_1950057_1950480_+	NA	NA|126aa|up_6|NZ_CP039543.1_1950489_1950867_+	pfam12732, YtxH, YtxH-like protein	NA|82aa|up_5|NZ_CP039543.1_1950866_1951112_+	NA	NA|716aa|up_4|NZ_CP039543.1_1951180_1953328_+	cd07550, P-type_ATPase_HM, P-type heavy metal-transporting ATPase; uncharacterized subfamily	NA|248aa|up_3|NZ_CP039543.1_1953314_1954058_+	smart00899, FeoA, This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria	NA|1630aa|up_2|NZ_CP039543.1_1954153_1959043_-	cd16434, CheB-CheR_fusion, Chemotaxis response regulator protein-glutamate methylesterase, CheB, fused with CheR domain	NA|391aa|up_1|NZ_CP039543.1_1959314_1960487_-	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]	NA|1875aa|up_0|NZ_CP039543.1_1960550_1966175_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|158aa|down_0|NZ_CP039543.1_1967139_1967613_-	NA	NA|179aa|down_1|NZ_CP039543.1_1967609_1968146_-	PRK09047, PRK09047, RNA polymerase factor sigma-70; Validated	NA|99aa|down_2|NZ_CP039543.1_1968285_1968582_+	NA	NA|431aa|down_3|NZ_CP039543.1_1968814_1970107_-	cd06180, MFS_YjiJ, Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters	NA|211aa|down_4|NZ_CP039543.1_1970329_1970962_+	COG1926, COG1926, Predicted phosphoribosyltransferases [General function prediction only]	NA|133aa|down_5|NZ_CP039543.1_1971474_1971873_+	cd17546, REC_hyHK_CKI1_RcsC-like, phosphoacceptor receiver (REC) domain of hybrid sensor histidine kinases/response regulators similar to Arabidopsis thaliana CKI1 and Escherichia coli RcsC	NA|300aa|down_6|NZ_CP039543.1_1972024_1972924_+	smart00978, Tim44, Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane	NA|80aa|down_7|NZ_CP039543.1_1973019_1973259_+	COG3905, COG3905, Predicted transcriptional regulator [Transcription]	NA|92aa|down_8|NZ_CP039543.1_1973248_1973524_+	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|227aa|down_9|NZ_CP039543.1_1973554_1974235_-	PRK10710, PRK10710, DNA-binding transcriptional regulator BaeR; Provisional
GCF_013085545.1_ASM1308554v1	NZ_CP039543	Desulfovibrio marinus strain CS1 chromosome, complete genome	4	3541872-3545790	4,4,2,5	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas4,cas8c	 Type I-U?,Type I-C,Type I-U	GTCGCTCCCCCCGCGGGAGCGCGGATTGAAAC,GTTTCAATCCGCGCTCCCGCGGGGGGAGCGAC,GTTTCAATCCGCGCTCCCGCGGGGGGAGCGAC,GTCGCTCCCCCCGCGGGAGCGCGGATTGAAAC	32,32,32,32	0	0	NA	NA	I-C:I-C:I-C:I-C	56,59,59,56	59	TypeI-U?,TypeI-C,TypeI-U	csa3,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,cas4,cas8c	NA|160aa|up_9|NZ_CP039543.1_3525656_3526136_-,NA|144aa|up_3|NZ_CP039543.1_3538121_3538553_-,NA	NA|160aa|up_9|NZ_CP039543.1_3525656_3526136_-	NA	NA|416aa|up_8|NZ_CP039543.1_3526776_3528024_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|450aa|up_7|NZ_CP039543.1_3528588_3529938_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|906aa|up_6|NZ_CP039543.1_3530160_3532878_-	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion]	NA|664aa|up_5|NZ_CP039543.1_3533155_3535147_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|772aa|up_4|NZ_CP039543.1_3535562_3537878_-	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane]	NA|144aa|up_3|NZ_CP039543.1_3538121_3538553_-	NA	NA|278aa|up_2|NZ_CP039543.1_3538865_3539699_+	pfam13531, SBP_bac_11, Bacterial extracellular solute-binding protein	NA|128aa|up_1|NZ_CP039543.1_3540003_3540387_+	TIGR04535, conserved_hypothetical_protein, ferritin-like protein	NA|268aa|up_0|NZ_CP039543.1_3540437_3541241_+	pfam04454, Linocin_M18, Encapsulating protein for peroxidase	cas2|97aa|down_0|NZ_CP039543.1_3546002_3546293_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|343aa|down_1|NZ_CP039543.1_3546296_3547325_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|219aa|down_2|NZ_CP039543.1_3547321_3547978_-	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas7|289aa|down_3|NZ_CP039543.1_3548040_3548907_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8c|624aa|down_4|NZ_CP039543.1_3548942_3550814_-	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas5|228aa|down_5|NZ_CP039543.1_3550810_3551494_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|738aa|down_6|NZ_CP039543.1_3551543_3553757_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	NA|349aa|down_7|NZ_CP039543.1_3554616_3555663_+	pfam00665, rve, Integrase core domain	NA|693aa|down_8|NZ_CP039543.1_3555903_3557982_+	PRK07429, PRK07429, phosphoribulokinase; Provisional	NA|262aa|down_9|NZ_CP039543.1_3557894_3558680_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]
