assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013085725.1_ASM1308572v1	NZ_CP038443	Aeromonas media strain R1-18 chromosome, complete genome	1	383589-383699	1	CRISPRCasFinder	no		DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	Orphan	ATCCATCACCCCGAGACGGGGCAGCC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	NA|135aa|up_4|NZ_CP038443.1_379227_379632_+,NA|112aa|down_7|NZ_CP038443.1_393493_393829_+	NA|589aa|up_9|NZ_CP038443.1_365498_367265_-	pfam16403, DUF5011, Domain of unknown function (DUF5011)	NA|1154aa|up_8|NZ_CP038443.1_370384_373846_-	COG0591, PutP, Na+/proline symporter [Amino acid transport and metabolism / General function prediction only]	NA|381aa|up_7|NZ_CP038443.1_373928_375071_-	PRK11128, PRK11128, 3-phenylpropionate MFS transporter	NA|325aa|up_6|NZ_CP038443.1_377633_378608_+	cd14727, ChanN-like, ChaN is an iron-regulated, heme-binding protein	NA|185aa|up_5|NZ_CP038443.1_378633_379188_+	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases	NA|135aa|up_4|NZ_CP038443.1_379227_379632_+	NA	NA|186aa|up_3|NZ_CP038443.1_379702_380260_-	TIGR04110, hypothetical_protein_VSWAT3_12502, heme utilization protein HutZ	NA|171aa|up_2|NZ_CP038443.1_380256_380769_-	TIGR04108, Heme_utilization_protein_HuvX, putative heme utilization carrier protein HutX	NA|280aa|up_1|NZ_CP038443.1_380937_381777_+	cd01149, HutB, Hemin binding protein HutB	NA|344aa|up_0|NZ_CP038443.1_381773_382805_+	pfam01032, FecCD, FecCD transport family	NA|203aa|down_0|NZ_CP038443.1_383782_384391_-	COG1284, COG1284, Uncharacterized conserved protein [Function unknown]	NA|454aa|down_1|NZ_CP038443.1_384694_386056_+	COG1004, Ugd, Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]	NA|333aa|down_2|NZ_CP038443.1_386052_387051_+	cd05253, UDP_GE_SDE_e, UDP glucuronic acid epimerase, extended (e) SDRs	NA|567aa|down_3|NZ_CP038443.1_387110_388811_-	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane]	NA|118aa|down_4|NZ_CP038443.1_388788_389142_-	COG3952, COG3952, Predicted membrane protein [Function unknown]	NA|282aa|down_5|NZ_CP038443.1_390515_391361_+	cd00254, LT-like, lytic transglycosylase(LT)-like domain	NA|556aa|down_6|NZ_CP038443.1_391692_393360_+	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|112aa|down_7|NZ_CP038443.1_393493_393829_+	NA	NA|452aa|down_8|NZ_CP038443.1_394091_395447_+	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|273aa|down_9|NZ_CP038443.1_395514_396333_-	PRK09430, djlA, co-chaperone DjlA
GCF_013085725.1_ASM1308572v1	NZ_CP038443	Aeromonas media strain R1-18 chromosome, complete genome	2	786573-786657	2	CRISPRCasFinder	no		DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	Orphan	TGCCTGCCGCGTTGCGCCAGCCAGCCGA	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	NA,NA	NA|184aa|up_9|NZ_CP038443.1_777387_777939_+	pfam04717, Phage_base_V, Type VI secretion system, phage-baseplate injector	NA|124aa|up_8|NZ_CP038443.1_777935_778307_+	PHA02516, W, baseplate wedge subunit; Provisional	NA|300aa|up_7|NZ_CP038443.1_778303_779203_+	PHA02568, J, baseplate assembly protein; Provisional	NA|211aa|up_6|NZ_CP038443.1_779199_779832_+	COG4385, gpI, Bacteriophage P2-related tail formation protein [General function prediction only]	NA|472aa|up_5|NZ_CP038443.1_779828_781244_+	COG5301, COG5301, Phage-related tail fibre protein [General function prediction only]	NA|203aa|up_4|NZ_CP038443.1_781243_781852_+	pfam02413, Caudo_TAP, Caudovirales tail fibre assembly protein, lambda gpK	NA|393aa|up_3|NZ_CP038443.1_782032_783211_+	PHA02560, FI, major tail sheath protein; Provisional	NA|173aa|up_2|NZ_CP038443.1_783220_783739_+	PHA02600, FII, major tail tube protein; Provisional	NA|95aa|up_1|NZ_CP038443.1_783819_784104_+	pfam10109, Phage_TAC_7, Phage tail assembly chaperone proteins, E, or 41 or 14	NA|44aa|up_0|NZ_CP038443.1_784112_784244_+	pfam06528, Phage_P2_GpE, Phage P2 GpE	NA|165aa|down_0|NZ_CP038443.1_786880_787375_+	COG3499, COG3499, Phage protein U [General function prediction only]	NA|371aa|down_1|NZ_CP038443.1_787410_788523_+	PHA02561, D, tail protein; Provisional	NA|173aa|down_2|NZ_CP038443.1_789009_789528_+	pfam06271, RDD, RDD family	NA|357aa|down_3|NZ_CP038443.1_789611_790682_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|371aa|down_4|NZ_CP038443.1_790707_791820_-	TIGR04407, LptF_YjgP, LPS export ABC transporter permease LptF	NA|504aa|down_5|NZ_CP038443.1_791992_793504_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|152aa|down_6|NZ_CP038443.1_793660_794116_+	pfam04364, DNA_pol3_chi, DNA polymerase III chi subunit, HolC	NA|951aa|down_7|NZ_CP038443.1_794181_797034_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|431aa|down_8|NZ_CP038443.1_797276_798569_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|222aa|down_9|NZ_CP038443.1_798587_799253_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]
GCF_013085725.1_ASM1308572v1	NZ_CP038443	Aeromonas media strain R1-18 chromosome, complete genome	3	903426-903547	3	CRISPRCasFinder	no		DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	Orphan	GCCCCTCGATGTCGAGGCAGCGCGGCTCATGCTGACCCCGAAGGCG	46	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	NA|59aa|up_7|NZ_CP038443.1_897253_897430_+,NA|194aa|up_3|NZ_CP038443.1_901037_901619_+,NA|146aa|up_2|NZ_CP038443.1_901733_902171_-,NA	NA|132aa|up_9|NZ_CP038443.1_894967_895363_-	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|580aa|up_8|NZ_CP038443.1_895413_897153_-	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|59aa|up_7|NZ_CP038443.1_897253_897430_+	NA	NA|423aa|up_6|NZ_CP038443.1_897588_898857_+	PRK06084, PRK06084, bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA|209aa|up_5|NZ_CP038443.1_898958_899585_+	cd03046, GST_N_GTT1_like, GST_N family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S	NA|392aa|up_4|NZ_CP038443.1_899668_900844_-	COG1979, COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion]	NA|194aa|up_3|NZ_CP038443.1_901037_901619_+	NA	NA|146aa|up_2|NZ_CP038443.1_901733_902171_-	NA	NA|249aa|up_1|NZ_CP038443.1_902387_903134_-	cd05346, SDR_c5, classical (c) SDR, subgroup 5	NA|82aa|up_0|NZ_CP038443.1_903175_903421_-	pfam12292, DUF3624, Protein of unknown function (DUF3624)	NA|153aa|down_0|NZ_CP038443.1_903586_904045_-	COG0456, RimI, Acetyltransferases [General function prediction only]	NA|483aa|down_1|NZ_CP038443.1_904231_905680_+	pfam14401, RLAN, RimK-like ATPgrasp N-terminal domain	NA|322aa|down_2|NZ_CP038443.1_905687_906653_-	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain	NA|539aa|down_3|NZ_CP038443.1_906769_908386_-	cd00551, AmyAc_family, Alpha amylase catalytic domain family	NA|91aa|down_4|NZ_CP038443.1_908509_908782_-	pfam10387, DUF2442, Protein of unknown function (DUF2442)	NA|655aa|down_5|NZ_CP038443.1_909042_911007_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|299aa|down_6|NZ_CP038443.1_911185_912082_-	PRK09432, metF, methylenetetrahydrofolate reductase	NA|265aa|down_7|NZ_CP038443.1_912409_913204_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|482aa|down_8|NZ_CP038443.1_913266_914712_-	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|660aa|down_9|NZ_CP038443.1_914720_916700_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]
GCF_013085725.1_ASM1308572v1	NZ_CP038443	Aeromonas media strain R1-18 chromosome, complete genome	4	1138866-1138997	4	CRISPRCasFinder	no		DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	Orphan	TTCCCCTGGACCCACCATATGGAGGCCGGGGTCTATCT	38	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	NA|288aa|up_8|NZ_CP038443.1_1127824_1128688_+,NA|60aa|down_2|NZ_CP038443.1_1141370_1141550_+	NA|129aa|up_9|NZ_CP038443.1_1127250_1127637_+	TIGR02420, RNA_polymerase-binding_transcription_factor_DksA, RNA polymerase-binding protein DksA	NA|288aa|up_8|NZ_CP038443.1_1127824_1128688_+	NA	NA|157aa|up_7|NZ_CP038443.1_1128808_1129279_+	COG4539, COG4539, Predicted membrane protein [Function unknown]	NA|158aa|up_6|NZ_CP038443.1_1129275_1129749_+	pfam05981, CreA, CreA protein	NA|330aa|up_5|NZ_CP038443.1_1129826_1130816_+	cd12183, LDH_like_2, D-Lactate and related Dehydrogenases, NAD-binding and catalytic domains	NA|454aa|up_4|NZ_CP038443.1_1131095_1132457_+	PRK11678, PRK11678, putative chaperone; Provisional	NA|140aa|up_3|NZ_CP038443.1_1132628_1133048_+	pfam03724, META, META domain	NA|610aa|up_2|NZ_CP038443.1_1133996_1135826_+	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|178aa|up_1|NZ_CP038443.1_1135890_1136424_-	TIGR00636, PduO_Nterm, ATP:cob(I)alamin adenosyltransferase	NA|379aa|up_0|NZ_CP038443.1_1136509_1137646_-	pfam18433, DUF5610, Domain of unknown function (DUF5610)	NA|236aa|down_0|NZ_CP038443.1_1139164_1139872_+	PRK10701, PRK10701, DNA-binding transcriptional regulator RstA; Provisional	NA|442aa|down_1|NZ_CP038443.1_1139990_1141316_+	PRK10604, PRK10604, sensor protein RstB; Provisional	NA|60aa|down_2|NZ_CP038443.1_1141370_1141550_+	NA	NA|419aa|down_3|NZ_CP038443.1_1141616_1142873_-	PRK07232, PRK07232, bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed	NA|478aa|down_4|NZ_CP038443.1_1143052_1144486_-	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	NA|72aa|down_5|NZ_CP038443.1_1144612_1144828_-	PRK00019, rpmE, 50S ribosomal protein L31; Reviewed	NA|736aa|down_6|NZ_CP038443.1_1144975_1147183_+	PRK05580, PRK05580, primosome assembly protein PriA; Validated	NA|374aa|down_7|NZ_CP038443.1_1147373_1148495_-	PRK10808, PRK10808, outer membrane protein A; Reviewed	NA|292aa|down_8|NZ_CP038443.1_1148986_1149862_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|513aa|down_9|NZ_CP038443.1_1149900_1151439_-	PRK09224, PRK09224, threonine ammonia-lyase IlvA
GCF_013085725.1_ASM1308572v1	NZ_CP038443	Aeromonas media strain R1-18 chromosome, complete genome	5	1939348-1939489	5	CRISPRCasFinder	no		DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	Orphan	GGCGGCCAGAGGGCTGAAAATGGTAATTGATCGTCATTTTTC	42	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	NA,NA	NA|542aa|up_9|NZ_CP038443.1_1927987_1929613_-	PRK09344, PRK09344, phosphoenolpyruvate carboxykinase	NA|295aa|up_8|NZ_CP038443.1_1929762_1930647_-	PRK00114, hslO, Hsp33 family molecular chaperone HslO	NA|133aa|up_7|NZ_CP038443.1_1930752_1931151_-	PRK10348, PRK10348, ribosome-associated heat shock protein Hsp15; Provisional	NA|310aa|up_6|NZ_CP038443.1_1931290_1932220_+	TIGR01713, Type_II_secretion_system_protein_C, type II secretion system protein C	NA|683aa|up_5|NZ_CP038443.1_1932241_1934290_+	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D	NA|502aa|up_4|NZ_CP038443.1_1934289_1935795_+	TIGR02533, Type_II_secretion_system_protein_E, type II secretion system protein E	NA|407aa|up_3|NZ_CP038443.1_1935796_1937017_+	TIGR02120, Putative_general_secretion_pathway_protein_F, type II secretion system protein F	NA|144aa|up_2|NZ_CP038443.1_1937250_1937682_+	TIGR01710, Type_II_secretion_system_protein_G, type II secretion system protein G	NA|184aa|up_1|NZ_CP038443.1_1937720_1938272_+	TIGR01708, Type_II_secretion_system_protein_H, type II secretion system protein H	NA|120aa|up_0|NZ_CP038443.1_1938283_1938643_+	pfam02501, T2SSI, Type II secretion system (T2SS), protein I	NA|342aa|down_0|NZ_CP038443.1_1939566_1940592_+	pfam03934, T2SSK, Type II secretion system (T2SS), protein K	NA|395aa|down_1|NZ_CP038443.1_1940706_1941891_+	TIGR01709, Type_II_secretion_system_protein_L, type II secretion system protein L	NA|164aa|down_2|NZ_CP038443.1_1941887_1942379_+	pfam04612, T2SSM, Type II secretion system (T2SS), protein M	NA|253aa|down_3|NZ_CP038443.1_1942476_1943235_+	pfam01203, T2SSN, Type II secretion system (T2SS), protein N	NA|278aa|down_4|NZ_CP038443.1_1943283_1944117_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|423aa|down_5|NZ_CP038443.1_1944262_1945531_+	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|223aa|down_6|NZ_CP038443.1_1945632_1946301_-	PRK14988, PRK14988, GMP/IMP nucleotidase; Provisional	NA|203aa|down_7|NZ_CP038443.1_1946447_1947056_+	PRK11762, nudE, adenosine nucleotide hydrolase NudE; Provisional	NA|271aa|down_8|NZ_CP038443.1_1947097_1947910_+	TIGR01331, 3'2'5'-bisphosphate_nucleotidase_CysQ, 3'(2'),5'-bisphosphate nucleotidase, bacterial	NA|422aa|down_9|NZ_CP038443.1_1948322_1949588_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter
GCF_013085725.1_ASM1308572v1	NZ_CP038443	Aeromonas media strain R1-18 chromosome, complete genome	6	2811499-2811595	6	CRISPRCasFinder	no		DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	Orphan	GCTCAAGGGCTGATACCCCGCCAGCG	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	NA|68aa|up_7|NZ_CP038443.1_2800025_2800229_+,NA	NA|347aa|up_9|NZ_CP038443.1_2798057_2799098_-	PRK10461, PRK10461, thiamine biosynthesis lipoprotein ApbE; Provisional	NA|147aa|up_8|NZ_CP038443.1_2799392_2799833_+	cd13922, Azurin, Azurin is a redox partner for enzymes such as nitrite reductase or arsenite oxidase	NA|68aa|up_7|NZ_CP038443.1_2800025_2800229_+	NA	NA|187aa|up_6|NZ_CP038443.1_2800242_2800803_-	pfam05962, HutD, HutD	NA|110aa|up_5|NZ_CP038443.1_2802137_2802467_+	pfam12321, DUF3634, Protein of unknown function (DUF3634)	NA|148aa|up_4|NZ_CP038443.1_2803599_2804043_+	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|358aa|up_3|NZ_CP038443.1_2804543_2805617_+	PRK10525, PRK10525, cytochrome o ubiquinol oxidase subunit II; Provisional	NA|659aa|up_2|NZ_CP038443.1_2805620_2807597_+	TIGR02843, Cytochrome_bo3_ubiquinol_oxidase_subunit_1, cytochrome o ubiquinol oxidase, subunit I	NA|232aa|up_1|NZ_CP038443.1_2807517_2808213_+	PRK10663, PRK10663, cytochrome o ubiquinol oxidase subunit III; Provisional	NA|110aa|up_0|NZ_CP038443.1_2808212_2808542_+	PRK10582, PRK10582, cytochrome o ubiquinol oxidase subunit IV; Provisional	NA|368aa|down_0|NZ_CP038443.1_2811665_2812769_-	cd06259, YdcF-like, YdcF-like	NA|298aa|down_1|NZ_CP038443.1_2812919_2813813_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|161aa|down_2|NZ_CP038443.1_2813913_2814396_+	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ	NA|143aa|down_3|NZ_CP038443.1_2814406_2814835_+	pfam04657, DMT_YdcZ, Putative inner membrane exporter, YdcZ	NA|81aa|down_4|NZ_CP038443.1_2815115_2815358_-	pfam11730, DUF3297, Protein of unknown function (DUF3297)	NA|439aa|down_5|NZ_CP038443.1_2815455_2816772_-	cd17809, HipA_So_like, type II toxin-antitoxin sytem toxin HipA from Shewanella oneidensis and similar proteins	NA|99aa|down_6|NZ_CP038443.1_2816755_2817052_-	TIGR03070, couple_hipB, transcriptional regulator, y4mF family	NA|398aa|down_7|NZ_CP038443.1_2821079_2822273_-	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated	NA|475aa|down_8|NZ_CP038443.1_2822327_2823752_-	PRK09427, PRK09427, bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	NA|200aa|down_9|NZ_CP038443.1_2824833_2825433_-	PRK05670, PRK05670, anthranilate synthase component II; Provisional
GCF_013085725.1_ASM1308572v1	NZ_CP038443	Aeromonas media strain R1-18 chromosome, complete genome	7	2970961-2971083	7	CRISPRCasFinder	no	DinG	DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	Type IV-A	ATAGATCCCCTGTGCGACGCCATCGCCAAGGTGCTGTAA	39	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	NA|228aa|up_9|NZ_CP038443.1_2956868_2957552_-,NA|314aa|up_0|NZ_CP038443.1_2968721_2969663_+,NA	NA|228aa|up_9|NZ_CP038443.1_2956868_2957552_-	NA	NA|456aa|up_8|NZ_CP038443.1_2957602_2958970_-	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism]	NA|464aa|up_7|NZ_CP038443.1_2958993_2960385_-	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism]	NA|317aa|up_6|NZ_CP038443.1_2960711_2961662_+	PRK09563, rbgA, GTPase YlqF; Reviewed	NA|383aa|up_5|NZ_CP038443.1_2961902_2963051_+	PRK03633, PRK03633, putative MFS family transporter protein; Provisional	NA|299aa|up_4|NZ_CP038443.1_2963211_2964108_-	cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11	NA|220aa|up_3|NZ_CP038443.1_2964180_2964840_-	pfam09829, DUF2057, Uncharacterized protein conserved in bacteria (DUF2057)	DinG|696aa|up_2|NZ_CP038443.1_2964984_2967072_-	PRK11747, dinG, ATP-dependent DNA helicase DinG; Provisional	NA|354aa|up_1|NZ_CP038443.1_2967457_2968519_+	COG3203, OmpC, Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane]	NA|314aa|up_0|NZ_CP038443.1_2968721_2969663_+	NA	NA|502aa|down_0|NZ_CP038443.1_2971159_2972665_-	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|165aa|down_1|NZ_CP038443.1_2972791_2973286_-	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062)	NA|173aa|down_2|NZ_CP038443.1_2973279_2973798_-	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062)	NA|752aa|down_3|NZ_CP038443.1_2973826_2976082_+	PRK11539, PRK11539, ComEC family competence protein; Provisional	NA|590aa|down_4|NZ_CP038443.1_2976463_2978233_+	PRK11176, PRK11176, lipid A ABC transporter ATP-binding protein/permease MsbA	NA|332aa|down_5|NZ_CP038443.1_2978232_2979228_+	PRK00652, lpxK, tetraacyldisaccharide 4'-kinase; Reviewed	NA|67aa|down_6|NZ_CP038443.1_2979381_2979582_+	COG2835, COG2835, Uncharacterized conserved protein [Function unknown]	NA|250aa|down_7|NZ_CP038443.1_2979578_2980328_+	PRK05450, PRK05450, 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional	NA|215aa|down_8|NZ_CP038443.1_2980538_2981183_+	PRK09483, PRK09483, response regulator; Provisional	NA|185aa|down_9|NZ_CP038443.1_2983499_2984054_+	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
GCF_013085725.1_ASM1308572v1	NZ_CP038443	Aeromonas media strain R1-18 chromosome, complete genome	8	3279464-3279539	8	CRISPRCasFinder	no		DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	Orphan	GCTAGCGCATATGCATGATCTTGTT	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	NA|181aa|up_6|NZ_CP038443.1_3274440_3274983_+,NA|136aa|up_3|NZ_CP038443.1_3276619_3277027_+,NA|255aa|down_4|NZ_CP038443.1_3287079_3287844_+	NA|245aa|up_9|NZ_CP038443.1_3272153_3272888_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|202aa|up_8|NZ_CP038443.1_3272884_3273490_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|248aa|up_7|NZ_CP038443.1_3273532_3274276_-	PRK09429, mepA, penicillin-insensitive murein endopeptidase; Reviewed	NA|181aa|up_6|NZ_CP038443.1_3274440_3274983_+	NA	NA|93aa|up_5|NZ_CP038443.1_3275194_3275473_+	cd12399, RRM_HP0827_like, RNA recognition motif in Helicobacter pylori HP0827 protein and similar proteins	NA|300aa|up_4|NZ_CP038443.1_3275549_3276449_-	COG4989, COG4989, Predicted oxidoreductase [General function prediction only]	NA|136aa|up_3|NZ_CP038443.1_3276619_3277027_+	NA	NA|236aa|up_2|NZ_CP038443.1_3277099_3277807_+	PRK09009, PRK09009, SDR family oxidoreductase	NA|339aa|up_1|NZ_CP038443.1_3277893_3278910_+	PLN02721, PLN02721, threonine aldolase	NA|144aa|up_0|NZ_CP038443.1_3278977_3279409_-	pfam08448, PAS_4, PAS fold	NA|315aa|down_0|NZ_CP038443.1_3280578_3281523_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|234aa|down_1|NZ_CP038443.1_3281600_3282302_-	pfam11201, DUF2982, Protein of unknown function (DUF2982)	NA|521aa|down_2|NZ_CP038443.1_3284564_3286127_+	COG2978, AbgT, Putative p-aminobenzoyl-glutamate transporter [Coenzyme metabolism]	NA|242aa|down_3|NZ_CP038443.1_3286194_3286920_+	PRK10765, PRK10765, oxygen-insensitive NADPH nitroreductase	NA|255aa|down_4|NZ_CP038443.1_3287079_3287844_+	NA	NA|185aa|down_5|NZ_CP038443.1_3287837_3288392_+	pfam06185, YecM, YecM protein	NA|407aa|down_6|NZ_CP038443.1_3288404_3289625_-	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily	NA|304aa|down_7|NZ_CP038443.1_3289718_3290630_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|198aa|down_8|NZ_CP038443.1_3290720_3291314_-	PRK00393, ribA, GTP cyclohydrolase II RibA	NA|231aa|down_9|NZ_CP038443.1_3291576_3292269_+	PRK00023, cmk, (d)CMP kinase
GCF_013085725.1_ASM1308572v1	NZ_CP038443	Aeromonas media strain R1-18 chromosome, complete genome	9	3862865-3863005	9	CRISPRCasFinder	no		DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	Orphan	CACATCTGGCTGTTCACTCCCTTCCCCGGGGATTGCCAGCA	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	NA|240aa|up_5|NZ_CP038443.1_3854782_3855502_-,NA|282aa|down_6|NZ_CP038443.1_3868761_3869607_-	NA|324aa|up_9|NZ_CP038443.1_3847328_3848300_+	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|419aa|up_8|NZ_CP038443.1_3849506_3850763_+	cd05665, M20_Acy1_IAAspH, M20 Peptidases aminoacyclase-1 indole-3-acetic-L-aspartic acid hydrolase	NA|227aa|up_7|NZ_CP038443.1_3850834_3851515_-	PRK09449, PRK09449, dUMP phosphatase; Provisional	NA|499aa|up_6|NZ_CP038443.1_3851544_3853041_-	cd00433, Peptidase_M17, Cytosol aminopeptidase family, N-terminal and catalytic domains	NA|240aa|up_5|NZ_CP038443.1_3854782_3855502_-	NA	NA|545aa|up_4|NZ_CP038443.1_3855604_3857239_-	pfam11398, DUF2813, Protein of unknown function (DUF2813)	NA|296aa|up_3|NZ_CP038443.1_3857500_3858388_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|306aa|up_2|NZ_CP038443.1_3858545_3859463_+	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional	NA|311aa|up_1|NZ_CP038443.1_3859515_3860448_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|259aa|up_0|NZ_CP038443.1_3861526_3862303_-	COG3148, COG3148, Uncharacterized conserved protein [Function unknown]	NA|329aa|down_0|NZ_CP038443.1_3863086_3864073_-	PRK01966, ddl, D-alanine--D-alanine ligase	NA|159aa|down_1|NZ_CP038443.1_3865092_3865569_+	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate	NA|467aa|down_2|NZ_CP038443.1_3865842_3867243_+	PRK10590, PRK10590, ATP-dependent RNA helicase RhlE; Provisional	NA|146aa|down_3|NZ_CP038443.1_3867312_3867750_-	PRK10514, PRK10514, putative acetyltransferase; Provisional	NA|154aa|down_4|NZ_CP038443.1_3867799_3868261_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|111aa|down_5|NZ_CP038443.1_3868299_3868632_-	PRK02237, PRK02237, YnfA family protein	NA|282aa|down_6|NZ_CP038443.1_3868761_3869607_-	NA	NA|171aa|down_7|NZ_CP038443.1_3870063_3870576_+	pfam16105, DUF4823, Domain of unknown function (DUF4823)	NA|131aa|down_8|NZ_CP038443.1_3870601_3870994_+	cd04690, Nudix_Hydrolase_31, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|169aa|down_9|NZ_CP038443.1_3871095_3871602_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family
GCF_013085725.1_ASM1308572v1	NZ_CP038443	Aeromonas media strain R1-18 chromosome, complete genome	10	4027802-4027942	10	CRISPRCasFinder	no		DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	Orphan	TGAACATGGAAGAGCCGAAGAAATGAACCCGAGTCATCACCA	42	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	NA,NA	NA|113aa|up_9|NZ_CP038443.1_4016403_4016742_-	PRK00823, phhB, pterin-4-alpha-carbinolamine dehydratase; Validated	NA|265aa|up_8|NZ_CP038443.1_4016790_4017585_-	PRK11913, phhA, phenylalanine 4-monooxygenase; Reviewed	NA|344aa|up_7|NZ_CP038443.1_4017805_4018837_-	PRK05415, PRK05415, hypothetical protein; Provisional	NA|469aa|up_6|NZ_CP038443.1_4018867_4020274_-	pfam04317, DUF463, YcjX-like family, DUF463	NA|134aa|up_5|NZ_CP038443.1_4020350_4020752_-	TIGR02978, Phage_shock_protein_C	NA|79aa|up_4|NZ_CP038443.1_4020846_4021083_-	PRK09458, pspB, envelope stress response membrane protein PspB	NA|226aa|up_3|NZ_CP038443.1_4021086_4021764_-	TIGR02977, phage_shock_protein_A, phage shock protein A	NA|348aa|up_2|NZ_CP038443.1_4021959_4023003_+	TIGR02974, psp_operon_transcriptional_activator, psp operon transcriptional activator PspF	NA|320aa|up_1|NZ_CP038443.1_4024810_4025770_+	PRK15110, PRK15110, peptide ABC transporter permease SapB	NA|298aa|up_0|NZ_CP038443.1_4025814_4026708_+	COG4171, SapC, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms]	NA|262aa|down_0|NZ_CP038443.1_4028046_4028832_+	COG4167, SapF, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]	NA|253aa|down_1|NZ_CP038443.1_4028976_4029735_-	pfam06175, MiaE, tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)	NA|337aa|down_2|NZ_CP038443.1_4029863_4030874_-	cd06270, PBP1_GalS-like, ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism	NA|485aa|down_3|NZ_CP038443.1_4031127_4032582_+	PRK09796, PRK09796, PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; Provisional	NA|477aa|down_4|NZ_CP038443.1_4032613_4034044_+	PRK09852, PRK09852, cryptic 6-phospho-beta-glucosidase; Provisional	NA|507aa|down_5|NZ_CP038443.1_4034149_4035670_-	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional	NA|164aa|down_6|NZ_CP038443.1_4035688_4036180_-	PRK10845, PRK10845, colicin V production protein; Provisional	NA|432aa|down_7|NZ_CP038443.1_4036367_4037663_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|446aa|down_8|NZ_CP038443.1_4037951_4039289_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|203aa|down_9|NZ_CP038443.1_4039441_4040050_-	PRK00031, lolA, outer membrane lipoprotein chaperone LolA
GCF_013085725.1_ASM1308572v1	NZ_CP038443	Aeromonas media strain R1-18 chromosome, complete genome	11	4460663-4460802	11	CRISPRCasFinder	no	c2c9_V-U4	DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	Type V-U4	TCAGCCTCCGGTCGTTACTGGAAGGAGAGGGAAGAAGGCGGC	42	0	0	NA	NA	NA	1	1	TypeV-U4	DEDDh,csa3,DinG,WYL,cas14j,cas3,c2c9_V-U4	NA,NA	NA|577aa|up_9|NZ_CP038443.1_4449886_4451617_+	PRK13506, PRK13506, formate--tetrahydrofolate ligase; Provisional	NA|516aa|up_8|NZ_CP038443.1_4451689_4453237_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|219aa|up_7|NZ_CP038443.1_4453609_4454266_-	PRK09347, folE, GTP cyclohydrolase I; Provisional	NA|411aa|up_6|NZ_CP038443.1_4454618_4455851_+	PRK10680, PRK10680, molybdopterin biosynthesis protein MoeA; Provisional	NA|252aa|up_5|NZ_CP038443.1_4455847_4456603_+	PRK05690, PRK05690, molybdopterin biosynthesis protein MoeB; Provisional	NA|260aa|up_4|NZ_CP038443.1_4456668_4457448_-	TIGR03611, RutD, pyrimidine utilization protein D	NA|352aa|up_3|NZ_CP038443.1_4457518_4458574_-	TIGR02142, Molybdenum_import_ATP-binding_protein_ModC, molybdenum ABC transporter, ATP-binding protein	NA|227aa|up_2|NZ_CP038443.1_4458570_4459251_-	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism]	NA|243aa|up_1|NZ_CP038443.1_4459360_4460089_-	cd13539, PBP2_AvModA, Substrate binding domain of ModA/WtpA from Azotobacter vinelandii and its closest homologs;the type 2 periplasmic binding protein fold	NA|162aa|up_0|NZ_CP038443.1_4460173_4460659_-	PRK10678, moaE, molybdopterin synthase catalytic subunit MoaE	NA|82aa|down_0|NZ_CP038443.1_4460858_4461104_-	PRK11130, moaD, molybdopterin synthase small subunit; Provisional	NA|165aa|down_1|NZ_CP038443.1_4461100_4461595_-	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|176aa|down_2|NZ_CP038443.1_4461676_4462204_-	TIGR02667, Molybdenum_cofactor_biosynthesis_protein_B	NA|197aa|down_3|NZ_CP038443.1_4462425_4463016_-	TIGR02161, Cytochrome_c-type_protein_NapC, periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family	NA|152aa|down_4|NZ_CP038443.1_4463027_4463483_-	pfam03892, NapB, Nitrate reductase cytochrome c-type subunit (NapB)	NA|292aa|down_5|NZ_CP038443.1_4463482_4464358_-	PRK09477, napH, quinol dehydrogenase membrane component; Provisional	NA|245aa|down_6|NZ_CP038443.1_4464354_4465089_-	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional	NA|830aa|down_7|NZ_CP038443.1_4465102_4467592_-	PRK13532, PRK13532, nitrate reductase catalytic subunit NapA	NA|101aa|down_8|NZ_CP038443.1_4467718_4468021_-	pfam03927, NapD, NapD protein	NA|170aa|down_9|NZ_CP038443.1_4468017_4468527_-	cd10564, NapF_like, NapF, iron-sulfur subunit of periplasmic nitrate reductase
