The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP053571	Lactobacillus plantarum strain CNEI-KCA4 chromosome, complete genome	3327596	621999	704493	3327596	protease,bacteriocin,tRNA	Bacillus_virus(20.0%)	79	NA	NA
WP_003643762.1|621999_622563_-|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003641929.1|622756_623425_+	ribose 5-phosphate isomerase A	NA	NA	NA	NA	NA
WP_003641930.1|623582_625088_+	multicopper oxidase domain-containing protein	NA	NA	NA	NA	NA
WP_003643763.1|625352_625721_+	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
WP_003641932.1|625833_626343_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_003641933.1|626373_627570_-	DUF2075 domain-containing protein	NA	NA	NA	NA	NA
WP_003641934.1|627679_628150_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_171785729.1|628168_628624_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003641936.1|628727_629300_+	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA	NA
WP_025015650.1|629465_630386_-	ribonucleoside hydrolase RihC	NA	NA	NA	NA	NA
WP_024971424.1|630522_631434_+	oxidoreductase	NA	NA	NA	NA	NA
WP_003641939.1|632323_632770_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003641940.1|633007_634534_+	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_003641941.1|634534_635506_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	1.7e-23
WP_024971425.1|635583_636915_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003643773.1|637380_638898_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003641944.1|638912_640742_+	type 1 glycerol-3-phosphate oxidase	NA	NA	NA	NA	NA
WP_003641945.1|640756_641479_+	aquaporin family protein	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	31.9	3.2e-30
WP_033607791.1|647238_647514_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003641948.1|647510_648428_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003641949.1|648471_648735_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003641950.1|648846_649125_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171785730.1|649212_649398_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047672646.1|649415_649802_+	hypothetical protein	NA	NA	NA	NA	NA
WP_112297220.1|650644_650791_+	glycohydrolase toxin TNT-related protein	NA	NA	NA	NA	NA
WP_047672648.1|650867_651275_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003641957.1|651816_651954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011100991.1|652545_652824_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015379760.1|653150_653768_-	sugar O-acetyltransferase	NA	NA	NA	NA	NA
WP_021356659.1|653771_654926_-	MFS transporter	NA	NA	NA	NA	NA
WP_047672651.1|654929_655721_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_003641965.1|655791_656664_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003641966.1|656823_657639_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_171785731.1|658164_659541_+	branched-chain amino acid transport system II carrier protein	NA	NA	NA	NA	NA
WP_011100995.1|659585_660770_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003641969.1|661154_661358_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003641971.1|661769_662438_-|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_003641972.1|662434_662608_-|bacteriocin	two-peptide bacteriocin plantaricin JK subunit PlnK	bacteriocin	NA	NA	NA	NA
WP_087615202.1|662638_662806_-|bacteriocin	two-peptide bacteriocin plantaricin JK subunit PlnJ	bacteriocin	NA	NA	NA	NA
WP_003641974.1|663667_663868_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_003641975.1|663995_664163_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_061871501.1|664280_665480_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003641977.1|665510_666257_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003641979.1|667134_667281_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_171785653.1|667345_667558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_021356664.1|667471_668800_+	GHKL domain-containing protein	NA	NA	NA	NA	NA
WP_021356665.1|668800_669544_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_063204018.1|669661_670405_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_021356666.1|670698_671472_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_021356667.1|671570_671729_-|bacteriocin	two-peptide bacteriocin plantaricin EF subunit PlnF	bacteriocin	NA	NA	NA	NA
WP_003641985.1|671753_671924_-|bacteriocin	two-peptide bacteriocin plantaricin EF subunit PlnE	bacteriocin	NA	NA	NA	NA
WP_062688861.1|674357_675734_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_062688864.1|675823_676513_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_063721086.1|676579_677248_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_063731253.1|677334_678015_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_057136860.1|678108_678795_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_063722041.1|678910_679198_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_003646479.1|679209_679503_+	HigA family addiction module antidote protein	NA	M9MUN2	Rhodococcus_phage	48.3	9.9e-07
WP_011101002.1|679792_682102_-	ATP-binding domain-containing protein	NA	NA	NA	NA	NA
WP_057136862.1|682360_683137_+	carbon-nitrogen family hydrolase	NA	NA	NA	NA	NA
WP_003643815.1|683575_684592_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003641997.1|684999_685710_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003641998.1|685782_687144_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_003641999.1|687150_687339_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003642000.1|687328_687751_+	DUF3284 domain-containing protein	NA	NA	NA	NA	NA
WP_003643816.1|687973_689329_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_003642002.1|689346_690783_+	6-phospho-beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	25.5	9.7e-31
WP_003642003.1|690903_691800_+	ROK family protein	NA	NA	NA	NA	NA
WP_003642004.1|691949_692696_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_171785732.1|692808_693822_+|tRNA	tRNA-dihydrouridine synthase family protein	tRNA	NA	NA	NA	NA
WP_003642006.1|694275_695409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003643820.1|695413_696208_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003642008.1|696376_697294_+	Ppx/GppA family phosphatase	NA	NA	NA	NA	NA
WP_171785733.1|697339_698614_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA	NA
WP_003642010.1|698606_699566_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003642011.1|699587_700292_+	NAD-dependent protein deacylase	NA	NA	NA	NA	NA
WP_003642012.1|700291_701134_+	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_024971611.1|701730_702120_+	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_003643823.1|702441_704493_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	35.8	2.7e-90
>prophage 2
NZ_CP053571	Lactobacillus plantarum strain CNEI-KCA4 chromosome, complete genome	3327596	829274	879312	3327596	protease,tRNA,tail,portal,terminase,capsid,integrase	Lactobacillus_phage(48.15%)	58	824030:824044	849973:849987
824030:824044	attL	TCAATTAAAAATAAT	NA	NA	NA	NA
WP_003640924.1|829274_829967_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003643927.1|830156_831488_-	C1 family peptidase	NA	R4TV59	Phaeocystis_globosa_virus	33.3	5.4e-68
WP_003640926.1|831563_832247_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_003640927.1|832255_832552_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_003640928.1|832690_833227_+	dUTP diphosphatase	NA	J9PV85	Bacillus_phage	45.8	2.4e-35
WP_003643928.1|834105_835485_+	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_003640931.1|835500_836676_+	PIN/TRAM domain-containing protein	NA	NA	NA	NA	NA
WP_003640932.1|837001_838492_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_024971787.1|838769_840182_+|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	30.0	2.3e-45
WP_003640934.1|840183_840594_+	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_003640935.1|840565_841351_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_003640936.1|841352_841898_+	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_003640938.1|842404_843007_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_003637768.1|843068_843218_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_003640939.1|843229_843415_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_003643932.1|843519_844068_+	transcription termination/antitermination protein NusG	NA	NA	NA	NA	NA
WP_003640941.1|844095_844983_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003640942.1|845084_845510_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
WP_003640943.1|845610_846300_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
WP_003643933.1|846498_847002_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
WP_003637775.1|847063_847432_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
WP_046947784.1|847586_848789_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A126GGK4	Streptococcus_phage	28.4	3.8e-36
WP_171785747.1|849261_850188_-	DUF5067 domain-containing protein	NA	NA	NA	NA	NA
849973:849987	attR	ATTATTTTTAATTGA	NA	NA	NA	NA
WP_171785748.1|850239_850671_-	hypothetical protein	NA	O03904	Lactobacillus_phage	95.1	8.6e-76
WP_046947781.1|850679_851078_-	helix-turn-helix transcriptional regulator	NA	O03970	Lactobacillus_phage	97.0	4.0e-67
WP_063489236.1|851244_851511_+	helix-turn-helix transcriptional regulator	NA	O03906	Lactobacillus_phage	97.7	4.7e-40
WP_063489237.1|851776_852178_-	DUF2513 domain-containing protein	NA	A0A097PAT1	Streptococcus_pyogenes_phage	30.7	9.4e-08
WP_076635630.1|852351_852561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171785749.1|853164_853347_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011101088.1|853407_853962_+	hypothetical protein	NA	O03909	Lactobacillus_phage	100.0	3.6e-98
WP_171785750.1|853967_854255_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_024002536.1|854757_855288_+	host-nuclease inhibitor Gam family protein	NA	E9LUU0	Lactobacillus_phage	59.2	6.1e-55
WP_171785751.1|855299_856265_+	hypothetical protein	NA	A6M982	Geobacillus_virus	51.5	3.3e-59
WP_171785752.1|856347_857277_+	DUF4373 domain-containing protein	NA	A0A0P0HRQ2	Lactobacillus_phage	43.0	1.8e-57
WP_171785753.1|857273_857561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171785754.1|857557_858076_+	hypothetical protein	NA	O03915	Lactobacillus_phage	52.0	4.7e-36
WP_024971543.1|858072_858447_+	endodeoxyribonuclease	NA	NA	NA	NA	NA
WP_171785755.1|858449_858761_+	hypothetical protein	NA	A0A2P0ZLB4	Lactobacillus_phage	92.2	2.2e-49
WP_171785756.1|858876_859857_+	DNA cytosine methyltransferase	NA	A0A1I9KKE7	Lactobacillus_phage	64.2	3.4e-128
WP_076633972.1|860080_860542_+	transcriptional regulator	NA	D6PSV8	Lactobacillus_phage	56.3	3.1e-39
WP_171785757.1|861293_861917_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171785758.1|862229_862730_+	hypothetical protein	NA	D6PSW4	Lactobacillus_phage	79.5	4.7e-65
WP_171785759.1|862744_862942_+	hypothetical protein	NA	D6PSW6	Lactobacillus_phage	65.3	9.9e-11
WP_171785760.1|863194_863464_+	DUF2829 domain-containing protein	NA	A0A0K2FLC4	Brevibacillus_phage	40.2	1.1e-09
WP_171785761.1|863504_864170_+	helix-turn-helix domain-containing protein	NA	A0A1S5SAA7	Streptococcus_phage	53.3	1.6e-44
WP_171785762.1|864150_865476_+|terminase	PBSX family phage terminase large subunit	terminase	A0A1S5SA45	Streptococcus_phage	55.7	1.3e-138
WP_171785763.1|865478_867074_+|portal	phage portal protein	portal	B5LPR1	Bacillus_virus	38.0	5.3e-86
WP_171785764.1|867066_868152_+	hypothetical protein	NA	A0A059T7W2	Listeria_phage	30.2	1.8e-37
WP_171785765.1|868215_868818_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171785766.1|868831_869779_+|capsid	N4-gp56 family major capsid protein	capsid	A8ASJ6	Listeria_phage	59.9	6.1e-90
WP_171785767.1|870138_870543_+	hypothetical protein	NA	A5GYM1	Lactococcus_phage	26.9	8.8e-06
WP_171785768.1|870543_870933_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171785769.1|870929_871331_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047673698.1|871330_871756_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063486493.1|871773_872391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064972011.1|872509_873028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171785770.1|873024_873666_+	hypothetical protein	NA	U3PFU8	Lactobacillus_phage	28.9	3.3e-07
WP_171785771.1|873681_879312_+|tail	phage tail tape measure protein	tail	A0A1S5SFC1	Streptococcus_phage	26.5	8.2e-25
>prophage 3
NZ_CP053571	Lactobacillus plantarum strain CNEI-KCA4 chromosome, complete genome	3327596	1357279	1363462	3327596		Escherichia_phage(50.0%)	8	NA	NA
WP_003643247.1|1357279_1358149_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	60.5	1.3e-99
WP_003643248.1|1358152_1358734_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	45.1	2.5e-38
WP_003643249.1|1358743_1359772_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	42.1	4.9e-69
WP_003643250.1|1359842_1360709_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.8	2.5e-34
WP_003643251.1|1360722_1360938_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_003643252.1|1360994_1361942_+	glycosyltransferase	NA	A0A2L1GG98	Phaseolus_vulgaris_alphaendornavirus	33.3	1.1e-09
WP_003643253.1|1361944_1362640_+	acyltransferase	NA	NA	NA	NA	NA
WP_003643254.1|1362658_1363462_+	LicD family protein	NA	A0A1V0SAS8	Catovirus	40.7	1.2e-06
>prophage 4
NZ_CP053571	Lactobacillus plantarum strain CNEI-KCA4 chromosome, complete genome	3327596	1496972	1565721	3327596	protease,holin,head,tRNA,tail,portal,terminase,capsid,integrase	Lactobacillus_phage(80.0%)	71	1502682:1502698	1544119:1544135
WP_003645251.1|1496972_1497659_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003643149.1|1498330_1498807_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003643148.1|1498923_1499436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003643147.1|1499550_1499838_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060683879.1|1499902_1502170_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	31.5	1.1e-118
1502682:1502698	attL	AATTATGCCCCAGGCAG	NA	NA	NA	NA
WP_171785837.1|1502814_1503951_-|integrase	site-specific integrase	integrase	E9LUS1	Lactobacillus_phage	98.4	2.2e-211
WP_033613717.1|1504191_1504506_-	hypothetical protein	NA	E9LUS3	Lactobacillus_phage	96.2	4.2e-48
WP_033613719.1|1504498_1504912_-	hypothetical protein	NA	E9LUS4	Lactobacillus_phage	98.5	4.3e-72
WP_128536997.1|1505091_1505286_-	hypothetical protein	NA	A0A2P0ZL93	Lactobacillus_phage	60.3	3.3e-11
WP_171785838.1|1505607_1506849_-	ribonuclease H-like domain-containing protein	NA	A0A0A7RWA3	Clostridium_phage	35.3	2.6e-24
WP_003641360.1|1506909_1507299_-	ImmA/IrrE family metallo-endopeptidase	NA	D6PSS8	Lactobacillus_phage	54.3	4.6e-36
WP_171785839.1|1507329_1507656_-	helix-turn-helix transcriptional regulator	NA	A0A1B0Y2R0	Lactobacillus_phage	44.1	9.0e-17
WP_171785840.1|1507913_1508129_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171785841.1|1508211_1508949_+	ORF6C domain-containing protein	NA	A0A1P8BM06	Lactococcus_phage	45.6	1.3e-50
WP_171785842.1|1509117_1509351_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171785843.1|1509445_1509775_+	DUF771 domain-containing protein	NA	E9LUT3	Lactobacillus_phage	81.7	5.8e-48
WP_171785844.1|1509863_1510103_+	tagatose-bisphosphate aldolase	NA	E9LUT6	Lactobacillus_phage	82.4	1.0e-33
WP_171785845.1|1510114_1510279_+	hypothetical protein	NA	E9LUT8	Lactobacillus_phage	80.8	1.9e-15
WP_171785846.1|1510281_1510428_+	hypothetical protein	NA	E9LUT9	Lactobacillus_phage	95.7	8.0e-18
WP_072566891.1|1510427_1511288_+	DUF1351 domain-containing protein	NA	A0A0P0IV40	Lactobacillus_phage	34.0	4.2e-37
WP_171785847.1|1511287_1511914_+	ERF family protein	NA	D7RWM8	Brochothrix_phage	38.2	1.0e-13
WP_171785848.1|1511910_1512372_+	single-stranded DNA-binding protein	NA	A0A218MNB4	uncultured_virus	71.8	1.1e-39
WP_171785849.1|1512386_1513079_+	hypothetical protein	NA	E9LUU3	Lactobacillus_phage	87.4	3.6e-116
WP_171785850.1|1513120_1513957_+	helix-turn-helix domain-containing protein	NA	U5U793	Lactobacillus_phage	41.4	1.4e-37
WP_171785851.1|1513960_1514263_+	hypothetical protein	NA	E9LUN7	Lactobacillus_phage	95.0	5.9e-47
WP_171785852.1|1514265_1514577_+	hypothetical protein	NA	A0A2P0ZLB4	Lactobacillus_phage	93.2	5.9e-50
WP_171785853.1|1514580_1514739_+	hypothetical protein	NA	A0A2P0ZLB5	Lactobacillus_phage	88.2	8.1e-16
WP_171786061.1|1514751_1514793_+	hypothetical protein	NA	NA	NA	NA	NA
WP_171785854.1|1514795_1515188_+	hypothetical protein	NA	C1KFE9	Lactobacillus_virus	59.7	8.2e-33
WP_171785855.1|1515546_1515972_+	transcriptional regulator	NA	E9LUP5	Lactobacillus_phage	86.5	1.6e-66
WP_122036804.1|1516399_1517017_+	DUF4145 domain-containing protein	NA	Q20DE2	Lactobacillus_phage	49.0	7.8e-54
WP_122036803.1|1517088_1517292_+	hypothetical protein	NA	NA	NA	NA	NA
WP_122036802.1|1517338_1517518_+	hypothetical protein	NA	E9LUP6	Lactobacillus_phage	71.2	8.6e-14
WP_171786062.1|1517528_1517999_+	HNH endonuclease	NA	E9LUP7	Lactobacillus_phage	93.6	6.1e-83
WP_033608389.1|1518219_1518681_+|terminase	phage terminase small subunit P27 family	terminase	A0A286QRF4	Streptococcus_phage	58.2	6.5e-45
WP_122036924.1|1518667_1520575_+|terminase	terminase large subunit	terminase	E9LUP9	Lactobacillus_phage	49.7	9.8e-180
WP_033608390.1|1520564_1520759_+	DUF1056 family protein	NA	E9LUQ0	Lactobacillus_phage	92.2	2.0e-24
WP_033608391.1|1520761_1521958_+|portal	phage portal protein	portal	E9LUQ1	Lactobacillus_phage	89.7	1.5e-205
WP_171785856.1|1521935_1522709_+|protease	Clp protease ClpP	protease	E9LUQ2	Lactobacillus_phage	91.1	2.0e-123
WP_114619779.1|1522708_1523941_+|capsid	phage major capsid protein	capsid	E9LUQ3	Lactobacillus_phage	87.7	1.9e-200
WP_016058329.1|1524013_1524352_+|head,tail	phage gp6-like head-tail connector protein	head,tail	E9LUQ4	Lactobacillus_phage	100.0	7.0e-57
WP_021732004.1|1524335_1524698_+|head	phage head closure protein	head	E9LUQ5	Lactobacillus_phage	99.2	1.5e-65
WP_021732003.1|1524687_1525128_+	hypothetical protein	NA	E9LUQ6	Lactobacillus_phage	97.9	3.2e-78
WP_022638398.1|1525124_1525508_+	DUF806 family protein	NA	E9LUQ7	Lactobacillus_phage	96.9	1.0e-64
WP_021732001.1|1525508_1526147_+|tail	major tail protein	tail	E9LUQ8	Lactobacillus_phage	92.9	3.7e-107
WP_016058334.1|1526347_1526731_+	hypothetical protein	NA	E9LUQ9	Lactobacillus_phage	100.0	3.9e-64
WP_016058335.1|1526727_1526919_+	hypothetical protein	NA	E9LUR0	Lactobacillus_phage	100.0	1.5e-27
WP_171785857.1|1526931_1531866_+	tape measure protein	NA	E9LUR1	Lactobacillus_phage	83.0	0.0e+00
WP_171785858.1|1531937_1533716_+|tail	phage tail family protein	tail	A0A2P0ZLH2	Lactobacillus_phage	92.5	3.5e-304
WP_171785859.1|1533781_1536196_+	hypothetical protein	NA	A0A2P0ZLF8	Lactobacillus_phage	93.2	0.0e+00
WP_171785860.1|1536212_1538435_+|tail	phage tail protein	tail	A0A2K9V5E9	Lactobacillus_phage	46.8	6.8e-124
WP_171785861.1|1538427_1538679_+	hypothetical protein	NA	A0A2K9VDF6	Lactobacillus_phage	97.2	1.2e-29
WP_171785862.1|1538682_1538844_+	hypothetical protein	NA	A0A2P0ZLG1	Lactobacillus_phage	94.3	1.2e-17
WP_003644510.1|1542594_1542858_+	hemolysin XhlA family protein	NA	E9LUR9	Lactobacillus_phage	100.0	2.0e-38
WP_171785863.1|1542869_1543400_+|holin	holin	holin	E9LUS0	Lactobacillus_phage	94.7	1.8e-38
WP_033608566.1|1544456_1544882_-	lipoprotein	NA	NA	NA	NA	NA
1544119:1544135	attR	AATTATGCCCCAGGCAG	NA	NA	NA	NA
WP_003643143.1|1545046_1546060_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003643142.1|1546165_1546687_+	GtrA family protein	NA	NA	NA	NA	NA
WP_003645248.1|1546786_1547146_-	YisL family protein	NA	NA	NA	NA	NA
WP_060683880.1|1547218_1549075_-	bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
WP_060683881.1|1549088_1551395_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_060683882.1|1552283_1553921_+	sulfotransferase family protein	NA	NA	NA	NA	NA
WP_013355451.1|1553898_1555074_+	sulfate adenylyltransferase	NA	A0A2P1ELS9	Moumouvirus	31.9	2.9e-49
WP_003645243.1|1555076_1555700_+	adenylyl-sulfate kinase	NA	A0A2K9L4R9	Tupanvirus	40.6	4.8e-27
WP_171785864.1|1555689_1556646_+	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA	NA
WP_171785865.1|1556867_1558607_+	aryl-sulfate sulfotransferase	NA	NA	NA	NA	NA
WP_060684322.1|1559112_1560888_+	SLC13 family permease	NA	NA	NA	NA	NA
WP_003643131.1|1561162_1562554_+	MATE family efflux transporter	NA	NA	NA	NA	NA
WP_003643130.1|1562680_1562926_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060683885.1|1563314_1563761_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003643128.1|1564032_1565721_+|tRNA	arginine--tRNA ligase	tRNA	A0A2I2L3K1	Orpheovirus	32.9	1.2e-75
>prophage 5
NZ_CP053571	Lactobacillus plantarum strain CNEI-KCA4 chromosome, complete genome	3327596	1584861	1599021	3327596		Lactobacillus_phage(90.0%)	12	NA	NA
WP_011101397.1|1584861_1586100_+	hypothetical protein	NA	A0A2P0ZL72	Lactobacillus_phage	97.2	4.2e-216
WP_015825455.1|1586190_1587162_-	peptidase S41	NA	A0A2P0ZL68	Lactobacillus_phage	99.4	1.8e-182
WP_171785866.1|1587347_1588295_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	99.7	1.7e-177
WP_003643097.1|1588638_1589253_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	100.0	6.3e-112
WP_171785867.1|1589255_1591694_+	flavocytochrome c	NA	A0A2P0ZL82	Lactobacillus_phage	99.3	0.0e+00
WP_003643095.1|1591781_1592342_+	hypothetical protein	NA	A0A2P0ZL75	Lactobacillus_phage	100.0	2.7e-101
WP_003643094.1|1592412_1592853_-	nucleoside 2-deoxyribosyltransferase	NA	A0A2P0ZL88	Lactobacillus_phage	99.3	8.0e-77
WP_052098033.1|1593197_1593665_+	hypothetical protein	NA	A0A2P0ZL91	Lactobacillus_phage	99.4	6.1e-83
WP_060683890.1|1593639_1593879_+	DUF11 domain-containing protein	NA	A0A2P0ZL95	Lactobacillus_phage	100.0	1.8e-35
WP_154573519.1|1593845_1594613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024971408.1|1594667_1594925_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_060683892.1|1596747_1599021_-	HAD-IC family P-type ATPase	NA	M1HX51	Paramecium_bursaria_Chlorella_virus	23.5	3.8e-37
>prophage 6
NZ_CP053571	Lactobacillus plantarum strain CNEI-KCA4 chromosome, complete genome	3327596	2434864	2442263	3327596	head,tail,portal,terminase,capsid	uncultured_Caudovirales_phage(50.0%)	8	NA	NA
WP_021356366.1|2434864_2435134_-|head,tail	phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
WP_171785928.1|2435543_2437085_-|capsid	phage major capsid protein	capsid	B8R651	Lactobacillus_phage	25.4	1.8e-43
WP_171785929.1|2437081_2438182_-|portal	phage portal protein	portal	A0A2H4J9Q5	uncultured_Caudovirales_phage	33.4	7.2e-50
WP_080392743.1|2438182_2438383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171785930.1|2438336_2440040_-|terminase	terminase large subunit	terminase	A0A2H4JBN3	uncultured_Caudovirales_phage	40.7	2.9e-122
WP_016511396.1|2440036_2440510_-|terminase	phage terminase small subunit P27 family	terminase	NA	NA	NA	NA
WP_171785931.1|2441539_2441929_-	HNH endonuclease	NA	A0A1J0MFT4	Staphylococcus_phage	45.6	1.0e-19
WP_171785932.1|2441921_2442263_-|head	phage head closure protein	head	NA	NA	NA	NA
>prophage 7
NZ_CP053571	Lactobacillus plantarum strain CNEI-KCA4 chromosome, complete genome	3327596	2640997	2649508	3327596		Synechococcus_phage(33.33%)	9	NA	NA
WP_003645867.1|2640997_2641576_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.9	1.3e-21
WP_015380733.1|2641568_2642594_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	41.0	1.2e-59
WP_003642591.1|2642590_2644045_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.0	2.5e-50
WP_021356102.1|2644029_2646249_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.1	3.5e-144
WP_011101895.1|2646241_2646922_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_003642588.1|2646921_2647176_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_003642587.1|2647177_2647909_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4SM18	Cyanophage	37.3	1.6e-37
WP_046811071.1|2647911_2649042_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_003645861.1|2649025_2649508_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	41.0	2.3e-16
>prophage 8
NZ_CP053571	Lactobacillus plantarum strain CNEI-KCA4 chromosome, complete genome	3327596	3251979	3312571	3327596	integrase,holin,transposase	Lactobacillus_phage(14.29%)	56	3245260:3245277	3319533:3319550
3245260:3245277	attL	ATAAAGGCCTCAGCACCT	NA	NA	NA	NA
WP_163621679.1|3251979_3252870_-|transposase	IS3 family transposase	transposase	Q6J1X2	Lactobacillus_phage	98.6	1.3e-155
WP_016374491.1|3253001_3253127_-|transposase	IS3 family transposase	transposase	Q6J1X3	Lactobacillus_phage	92.7	1.4e-15
WP_163621677.1|3255149_3255782_+	recombinase family protein	NA	A0A1B0VBM1	Salmonella_phage	30.6	1.4e-13
WP_020923858.1|3255868_3256771_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	40.3	8.2e-52
WP_163621676.1|3257281_3257428_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071665541.1|3258203_3258989_+	ParA family protein	NA	Q7M293	Enterobacteria_phage	26.8	3.1e-07
WP_072535820.1|3259039_3259243_+	hypothetical protein	NA	NA	NA	NA	NA
WP_163621675.1|3259906_3261013_+	replication initiator protein A	NA	NA	NA	NA	NA
WP_003646131.1|3261271_3261553_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
WP_163621674.1|3261542_3262049_+	hypothetical protein	NA	NA	NA	NA	NA
WP_163621673.1|3262038_3262317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003555660.1|3262339_3262567_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171786044.1|3262819_3264883_+	MobA/MobL family protein	NA	NA	NA	NA	NA
WP_003679901.1|3265951_3266167_+	hypothetical protein	NA	NA	NA	NA	NA
WP_163621683.1|3266170_3266647_+	hypothetical protein	NA	NA	NA	NA	NA
WP_163621682.1|3268329_3270195_+	PRD domain-containing protein	NA	NA	NA	NA	NA
WP_163621681.1|3270184_3271051_+	ketose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_171786045.1|3271090_3273034_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
WP_171786046.1|3273867_3274839_-	S41 family peptidase	NA	NA	NA	NA	NA
WP_163621630.1|3275129_3275867_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_016378676.1|3276072_3276177_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_171785655.1|3276924_3277275_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016511100.1|3277782_3278046_+	hypothetical protein	NA	NA	NA	NA	NA
WP_097037849.1|3278160_3279933_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_086439174.1|3279981_3282063_+	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	24.7	1.7e-28
WP_072535529.1|3282081_3282681_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_163621631.1|3282897_3285582_+	DUF4118 domain-containing protein	NA	NA	NA	NA	NA
WP_163621632.1|3285571_3286273_+	response regulator	NA	W8CYM9	Bacillus_phage	29.3	4.8e-23
WP_097037818.1|3286438_3288475_+	KUP/HAK/KT family potassium transporter	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	33.6	4.7e-63
WP_171786047.1|3288858_3289296_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_171786048.1|3289673_3290243_+	recombinase family protein	NA	A0A1J1J8Z4	Escherichia_phage	44.6	1.6e-32
WP_171786049.1|3290337_3292158_-	MFS transporter	NA	NA	NA	NA	NA
WP_171786050.1|3292322_3292898_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_021356719.1|3293728_3294271_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_056971947.1|3294352_3294547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171786067.1|3294566_3296336_-	oleate hydratase	NA	NA	NA	NA	NA
WP_020090529.1|3296662_3296839_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010579558.1|3296838_3297057_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171786068.1|3298107_3298338_+	SH3 domain-containing protein	NA	NA	NA	NA	NA
WP_171786069.1|3298511_3298967_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_050676721.1|3299538_3300012_+	hypothetical protein	NA	NA	NA	NA	NA
WP_063485711.1|3300722_3301100_+	YxeA family protein	NA	NA	NA	NA	NA
WP_004906477.1|3301268_3301865_-	helix-turn-helix transcriptional regulator	NA	A0A0B5CYL9	Listeria_phage	45.1	5.9e-06
WP_171786051.1|3302101_3302461_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012660357.1|3302473_3303061_-|integrase	site-specific integrase	integrase	E2ELN7	Clostridium_phage	32.6	5.0e-18
WP_003586674.1|3303137_3303416_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_027822196.1|3303415_3303772_+	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA	NA
WP_027821369.1|3303892_3304333_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017260783.1|3304534_3304747_-	DUF3923 family protein	NA	NA	NA	NA	NA
WP_050676713.1|3304757_3305300_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_022638775.1|3305505_3306270_-	helix-turn-helix transcriptional regulator	NA	Q0H244	Geobacillus_phage	32.6	3.4e-06
WP_080263505.1|3306609_3306891_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_171786070.1|3307311_3308181_+	glucosaminidase domain-containing protein	NA	A0A249Y0X5	Enterococcus_phage	47.6	1.1e-34
WP_171786052.1|3309156_3309660_+	DUF536 domain-containing protein	NA	NA	NA	NA	NA
WP_171786053.1|3311415_3311628_-	hypothetical protein	NA	NA	NA	NA	NA
WP_171786054.1|3311983_3312571_-|integrase	site-specific integrase	integrase	A0A141E0P1	Streptococcus_phage	34.6	6.6e-18
3319533:3319550	attR	AGGTGCTGAGGCCTTTAT	NA	NA	NA	NA
