assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013167115.1_ASM1316711v1	NZ_CP053619	Lactobacillus rhamnosus strain LV108 chromosome, complete genome	1	1415159-1415310	1	CRISPRCasFinder	no		csa3,DinG,WYL,cas14j,DEDDh,cas3,csn2,cas2,cas1,cas9	Orphan	GGGCCATCACGCCCAAGGCCACAAGTCCGTCTTTACGCCCATAACGCGTTC	51	1	1	1415210-1415259	NZ_CP053619.1_1535036-1535085	NA	1	1	Orphan	csa3,DinG,WYL,cas14j,DEDDh,cas3,csn2,cas2,cas1,cas9	NA|51aa|up_9|NZ_CP053619.1_1408427_1408580_+,NA|61aa|down_8|NZ_CP053619.1_1423652_1423835_+	NA|51aa|up_9|NZ_CP053619.1_1408427_1408580_+	NA	NA|79aa|up_8|NZ_CP053619.1_1408619_1408856_+	COG4836, COG4836, Predicted membrane protein [Function unknown]	NA|330aa|up_7|NZ_CP053619.1_1408920_1409910_+	PRK13930, PRK13930, rod shape-determining protein MreB; Provisional	NA|57aa|up_6|NZ_CP053619.1_1409922_1410093_+	pfam11772, EpuA, DNA-directed RNA polymerase subunit beta	NA|102aa|up_5|NZ_CP053619.1_1410101_1410407_+	PRK14379, PRK14379, membrane protein insertion efficiency factor YidD	NA|74aa|up_4|NZ_CP053619.1_1410399_1410621_+	pfam11184, DUF2969, Protein of unknown function (DUF2969)	NA|402aa|up_3|NZ_CP053619.1_1410742_1411948_+	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|100aa|up_2|NZ_CP053619.1_1411959_1412259_+	cd06848, GCS_H, Glycine cleavage H-protein	NA|375aa|up_1|NZ_CP053619.1_1412388_1413513_-	PRK08588, PRK08588, succinyl-diaminopimelate desuccinylase; Reviewed	NA|276aa|up_0|NZ_CP053619.1_1414014_1414842_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|277aa|down_0|NZ_CP053619.1_1415791_1416622_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|351aa|down_1|NZ_CP053619.1_1416640_1417693_+	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional	NA|230aa|down_2|NZ_CP053619.1_1417697_1418387_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|256aa|down_3|NZ_CP053619.1_1418567_1419335_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|344aa|down_4|NZ_CP053619.1_1419327_1420359_+	TIGR01981, UPF0051_protein_Rv1462/MT1509, FeS assembly protein SufD	NA|399aa|down_5|NZ_CP053619.1_1420351_1421548_+	cd06453, SufS_like, Cysteine desulfurase (SufS)-like	NA|149aa|down_6|NZ_CP053619.1_1421534_1421981_+	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|479aa|down_7|NZ_CP053619.1_1421973_1423410_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|61aa|down_8|NZ_CP053619.1_1423652_1423835_+	NA	NA|127aa|down_9|NZ_CP053619.1_1424169_1424550_+	pfam07997, DUF1694, Protein of unknown function (DUF1694)
GCF_013167115.1_ASM1316711v1	NZ_CP053619	Lactobacillus rhamnosus strain LV108 chromosome, complete genome	2	1534917-1535031	2	CRISPRCasFinder	no		csa3,DinG,WYL,cas14j,DEDDh,cas3,csn2,cas2,cas1,cas9	Orphan	CTTACATTCTAGCTTACGCCCATAACGC	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DinG,WYL,cas14j,DEDDh,cas3,csn2,cas2,cas1,cas9	NA|151aa|up_2|NZ_CP053619.1_1533337_1533790_+,NA|100aa|up_1|NZ_CP053619.1_1533812_1534112_+,NA	NA|221aa|up_9|NZ_CP053619.1_1524558_1525221_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|224aa|up_8|NZ_CP053619.1_1525266_1525938_+	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|822aa|up_7|NZ_CP053619.1_1525924_1528390_+	TIGR01448, recD_rel, helicase, putative, RecD/TraA family	NA|406aa|up_6|NZ_CP053619.1_1528395_1529613_+	COG4552, Eis, Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]	NA|317aa|up_5|NZ_CP053619.1_1529741_1530692_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|561aa|up_4|NZ_CP053619.1_1530943_1532626_-	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	NA|71aa|up_3|NZ_CP053619.1_1532630_1532843_-	PRK13667, PRK13667, hypothetical protein; Provisional	NA|151aa|up_2|NZ_CP053619.1_1533337_1533790_+	NA	NA|100aa|up_1|NZ_CP053619.1_1533812_1534112_+	NA	NA|185aa|up_0|NZ_CP053619.1_1534153_1534708_-	PRK00150, def, peptide deformylase; Reviewed	NA|272aa|down_0|NZ_CP053619.1_1535583_1536399_+	cd02080, P-type_ATPase_cation, P-type cation-transporting ATPase similar to Exiguobacterium aurantiacum Mna, an Na(+)-ATPase, and Synechocystis sp	NA|371aa|down_1|NZ_CP053619.1_1536659_1537772_+	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit	NA|326aa|down_2|NZ_CP053619.1_1537774_1538752_+	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|552aa|down_3|NZ_CP053619.1_1538769_1540425_+	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed	NA|468aa|down_4|NZ_CP053619.1_1540427_1541831_+	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed	NA|297aa|down_5|NZ_CP053619.1_1542076_1542967_+	COG0039, Mdh, Malate/lactate dehydrogenases [Energy production and conversion]	NA|94aa|down_6|NZ_CP053619.1_1542956_1543238_+	pfam05256, UPF0223, Uncharacterized protein family (UPF0223)	NA|265aa|down_7|NZ_CP053619.1_1543240_1544035_+	cd01637, IMPase_like, Inositol-monophosphatase-like domains	NA|615aa|down_8|NZ_CP053619.1_1544287_1546132_+	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms]	NA|390aa|down_9|NZ_CP053619.1_1546377_1547547_+	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]
GCF_013167115.1_ASM1316711v1	NZ_CP053619	Lactobacillus rhamnosus strain LV108 chromosome, complete genome	3	2451073-2452959	3,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	csn2,cas2,cas1,cas9	csa3,DinG,WYL,cas14j,DEDDh,cas3,csn2,cas2,cas1,cas9	Type II-B,Type II-C,Type II-A	GTTCTTGAACTGATTGATCTGACATCTACCTGAGAC,GTTCTTGAACTGATTGATCTGACATCTACCTGAGAC,TGTTCTTGAACTGATTGATCTGACATCTACCTGAGACCAA,GTTCTTGAACTGATTGATCTGACATCTACCTGAGAC	36,36,40,36	0	0	NA	NA	NA:NA:NA:NA	28,28,25,25	28	TypeII-B,TypeII-C,TypeII-A	csa3,DinG,WYL,cas14j,DEDDh,cas3,csn2,cas2,cas1,cas9	NA|367aa|up_1|NZ_CP053619.1_2449227_2450328_-,NA	NA|215aa|up_9|NZ_CP053619.1_2438386_2439031_+	pfam13346, ABC2_membrane_5, ABC-2 family transporter protein	NA|262aa|up_8|NZ_CP053619.1_2439096_2439882_-	PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional	NA|483aa|up_7|NZ_CP053619.1_2440341_2441790_-	PRK09593, arb, 6-phospho-beta-glucosidase; Reviewed	NA|612aa|up_6|NZ_CP053619.1_2441808_2443644_-	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component	NA|291aa|up_5|NZ_CP053619.1_2444092_2444965_-	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional	NA|541aa|up_4|NZ_CP053619.1_2445096_2446719_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|565aa|up_3|NZ_CP053619.1_2446711_2448406_-	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|142aa|up_2|NZ_CP053619.1_2448617_2449043_-	pfam07009, NusG_II, NusG domain II	NA|367aa|up_1|NZ_CP053619.1_2449227_2450328_-	NA	NA|163aa|up_0|NZ_CP053619.1_2450535_2451024_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	csn2|227aa|down_0|NZ_CP053619.1_2452979_2453660_-	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|102aa|down_1|NZ_CP053619.1_2453656_2453962_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|302aa|down_2|NZ_CP053619.1_2453939_2454845_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1362aa|down_3|NZ_CP053619.1_2455036_2459122_-	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	NA|576aa|down_4|NZ_CP053619.1_2459416_2461144_-	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|581aa|down_5|NZ_CP053619.1_2461124_2462867_-	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]	NA|338aa|down_6|NZ_CP053619.1_2462863_2463877_-	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II	NA|475aa|down_7|NZ_CP053619.1_2463873_2465298_-	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|435aa|down_8|NZ_CP053619.1_2465529_2466834_-	TIGR02644, Thymidine_phosphorylase, pyrimidine-nucleoside phosphorylase	NA|340aa|down_9|NZ_CP053619.1_2466934_2467954_+	cd01320, ADA, Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively
