assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013167135.1_ASM1316713v1	NZ_CP038282	Escherichia coli O157:H7 strain F8492 chromosome, complete genome	1	1095323-1095411	1	CRISPRCasFinder	no	cas3	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	Unclear	GAGTTCCCCGCGCCAGCGGGGATAAACC	28	0	0	NA	NA	I-E	1	1	Unclear	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	NA,NA	NA|83aa|up_9|NZ_CP038282.1_1085799_1086048_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_8|NZ_CP038282.1_1086047_1086383_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_7|NZ_CP038282.1_1086453_1087245_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_6|NZ_CP038282.1_1087472_1089110_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_5|NZ_CP038282.1_1089197_1090496_+	PRK00077, eno, enolase; Provisional	NA|305aa|up_4|NZ_CP038282.1_1090555_1091470_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|up_3|NZ_CP038282.1_1091466_1092615_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|225aa|up_2|NZ_CP038282.1_1092848_1093523_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|207aa|up_1|NZ_CP038282.1_1093536_1094157_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|224aa|up_0|NZ_CP038282.1_1094311_1094983_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP038282.1_1096046_1097525_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP038282.1_1097551_1098829_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP038282.1_1099147_1099933_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP038282.1_1100002_1101457_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|260aa|down_4|NZ_CP038282.1_1102864_1103644_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|192aa|down_5|NZ_CP038282.1_1104648_1105224_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_6|NZ_CP038282.1_1105240_1105501_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|423aa|down_7|NZ_CP038282.1_1105491_1106760_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|121aa|down_8|NZ_CP038282.1_1106837_1107200_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_9|NZ_CP038282.1_1107518_1109318_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit
GCF_013167135.1_ASM1316713v1	NZ_CP038282	Escherichia coli O157:H7 strain F8492 chromosome, complete genome	2	1121100-1121312	1,1,2	PILER-CR,CRT,CRISPRCasFinder	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas2	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	Type I-E	TGTGTTCCCCGCGCCAGCGGGGATAAACCG,TGTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	30,30,29	0	0	NA	NA	I-E:I-E:I-E	2,3,3	3	TypeI-E	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	NA,NA	NA|571aa|up_9|NZ_CP038282.1_1109317_1111030_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP038282.1_1111103_1111838_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_7|NZ_CP038282.1_1112101_1112254_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_6|NZ_CP038282.1_1112445_1115145_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_5|NZ_CP038282.1_1115242_1116805_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_4|NZ_CP038282.1_1116801_1117338_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_3|NZ_CP038282.1_1117349_1118405_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_2|NZ_CP038282.1_1118415_1119162_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_1|NZ_CP038282.1_1119143_1119794_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP038282.1_1120710_1121004_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP038282.1_1121393_1122431_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP038282.1_1122682_1123591_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP038282.1_1123592_1125020_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP038282.1_1125019_1125625_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP038282.1_1125674_1125998_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP038282.1_1126191_1126503_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP038282.1_1126521_1127232_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP038282.1_1127231_1127711_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP038282.1_1127707_1128757_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP038282.1_1128737_1129499_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_013167135.1_ASM1316713v1	NZ_CP038282	Escherichia coli O157:H7 strain F8492 chromosome, complete genome	3	1687440-1687545	3	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	Orphan	CCGAGCCGTAGGCCGGATTAGGCGTT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	NA|357aa|up_5|NZ_CP038282.1_1681419_1682490_-,NA	NA|420aa|up_9|NZ_CP038282.1_1675606_1676866_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_8|NZ_CP038282.1_1676855_1678484_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_7|NZ_CP038282.1_1678756_1680115_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_6|NZ_CP038282.1_1680119_1681196_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|357aa|up_5|NZ_CP038282.1_1681419_1682490_-	NA	NA|293aa|up_4|NZ_CP038282.1_1682953_1683832_-	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|397aa|up_3|NZ_CP038282.1_1683983_1685174_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|217aa|up_2|NZ_CP038282.1_1685254_1685905_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP038282.1_1685958_1686213_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP038282.1_1686212_1687343_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP038282.1_1687569_1689855_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP038282.1_1690550_1694303_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP038282.1_1694443_1695166_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP038282.1_1695312_1697940_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|543aa|down_4|NZ_CP038282.1_1698147_1699776_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP038282.1_1699772_1700396_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP038282.1_1700539_1704934_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|265aa|down_7|NZ_CP038282.1_1704934_1705729_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|261aa|down_8|NZ_CP038282.1_1705801_1706584_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_9|NZ_CP038282.1_1706588_1707365_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_013167135.1_ASM1316713v1	NZ_CP038282	Escherichia coli O157:H7 strain F8492 chromosome, complete genome	4	2305984-2306133	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	Unclear	TACCAGAGATAGCGAACCGTAGGTCGGAAAAGGCGCTCGCGCCGCATCCGACA	53	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	NA|22aa|up_2|NZ_CP038282.1_2304071_2304137_+,NA	NA|273aa|up_9|NZ_CP038282.1_2298038_2298857_-	PRK10302, PRK10302, hypothetical protein; Provisional	NA|189aa|up_8|NZ_CP038282.1_2298853_2299420_-	PRK11440, PRK11440, putative hydrolase; Provisional	NA|591aa|up_7|NZ_CP038282.1_2299729_2301502_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|151aa|up_6|NZ_CP038282.1_2301619_2302072_+	PRK09438, nudB, dihydroneopterin triphosphate pyrophosphatase; Provisional	NA|247aa|up_5|NZ_CP038282.1_2302100_2302841_+	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator	NA|174aa|up_4|NZ_CP038282.1_2302875_2303397_+	TIGR00228, Crossover_junction_endodeoxyribonuclease_RuvC, crossover junction endodeoxyribonuclease RuvC	NA|201aa|up_3|NZ_CP038282.1_2303398_2304001_-	PRK11470, PRK11470, YebB family permuted papain-like enzyme	NA|22aa|up_2|NZ_CP038282.1_2304071_2304137_+	NA	NA|204aa|up_1|NZ_CP038282.1_2304275_2304887_+	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|337aa|up_0|NZ_CP038282.1_2304895_2305906_+	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|262aa|down_0|NZ_CP038282.1_2306151_2306937_-	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB	NA|252aa|down_1|NZ_CP038282.1_2306933_2307689_-	PRK09544, znuC, high-affinity zinc transporter ATPase; Reviewed	NA|311aa|down_2|NZ_CP038282.1_2307767_2308700_+	PRK09545, znuA, zinc ABC transporter substrate-binding protein ZnuA	NA|441aa|down_3|NZ_CP038282.1_2308715_2310038_+	PRK11649, PRK11649, putative peptidase; Provisional	NA|324aa|down_4|NZ_CP038282.1_2310157_2311129_+	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	NA|481aa|down_5|NZ_CP038282.1_2311259_2312702_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|290aa|down_6|NZ_CP038282.1_2312829_2313699_-	PRK11302, PRK11302, DNA-binding transcriptional regulator HexR; Provisional	NA|492aa|down_7|NZ_CP038282.1_2314036_2315512_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|604aa|down_8|NZ_CP038282.1_2315746_2317558_+	PRK09054, PRK09054, phosphogluconate dehydratase; Validated	NA|214aa|down_9|NZ_CP038282.1_2317594_2318236_+	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
GCF_013167135.1_ASM1316713v1	NZ_CP038282	Escherichia coli O157:H7 strain F8492 chromosome, complete genome	5	2505906-2506029	5	CRISPRCasFinder	no	DEDDh	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	NA,NA|30aa|down_7|NZ_CP038282.1_2514925_2515015_+	NA|471aa|up_9|NZ_CP038282.1_2495359_2496772_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP038282.1_2497328_2497538_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP038282.1_2497993_2498620_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP038282.1_2498640_2500743_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP038282.1_2500755_2501394_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP038282.1_2501457_2502126_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP038282.1_2502122_2502908_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP038282.1_2502911_2503724_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP038282.1_2503735_2505340_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP038282.1_2505465_2505771_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP038282.1_2506343_2507600_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP038282.1_2507640_2509014_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP038282.1_2509228_2509870_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP038282.1_2509909_2511058_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP038282.1_2511348_2512560_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP038282.1_2512672_2513605_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP038282.1_2513601_2514627_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP038282.1_2514925_2515015_+	NA	NA|390aa|down_8|NZ_CP038282.1_2515180_2516350_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP038282.1_2516495_2517077_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_013167135.1_ASM1316713v1	NZ_CP038282	Escherichia coli O157:H7 strain F8492 chromosome, complete genome	6	3180043-3180156	2	PILER-CR	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	Orphan	TTTTTTTACCTGATTCGGGTAAA	23	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	NA|47aa|up_9|NZ_CP038282.1_3174502_3174643_-,NA|41aa|up_3|NZ_CP038282.1_3177992_3178115_-,NA|101aa|up_1|NZ_CP038282.1_3178579_3178882_-,NA|79aa|down_0|NZ_CP038282.1_3180504_3180741_+	NA|47aa|up_9|NZ_CP038282.1_3174502_3174643_-	NA	NA|121aa|up_8|NZ_CP038282.1_3174639_3175002_-	PRK09786, PRK09786, endodeoxyribonuclease RUS; Reviewed	NA|97aa|up_7|NZ_CP038282.1_3174998_3175289_-	pfam07102, DUF1364, Protein of unknown function (DUF1364)	NA|57aa|up_6|NZ_CP038282.1_3175281_3175452_-	PRK09689, PRK09689, prophage protein NinE; Provisional	NA|152aa|up_5|NZ_CP038282.1_3175451_3175907_-	PRK09741, PRK09741, hypothetical protein; Provisional	NA|509aa|up_4|NZ_CP038282.1_3176408_3177935_-	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain	NA|41aa|up_3|NZ_CP038282.1_3177992_3178115_-	NA	NA|111aa|up_2|NZ_CP038282.1_3178179_3178512_-	PRK09541, emrE, EmrE family multidrug efflux SMR transporter	NA|101aa|up_1|NZ_CP038282.1_3178579_3178882_-	NA	NA|234aa|up_0|NZ_CP038282.1_3178878_3179580_-	pfam06992, Phage_lambda_P, Replication protein P	NA|79aa|down_0|NZ_CP038282.1_3180504_3180741_+	NA	NA|381aa|down_1|NZ_CP038282.1_3180730_3181873_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|417aa|down_2|NZ_CP038282.1_3181986_3183237_-	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed	NA|218aa|down_3|NZ_CP038282.1_3183408_3184062_+	PRK11394, PRK11394, 23S rRNA pseudouridine(2457) synthase RluE	NA|154aa|down_4|NZ_CP038282.1_3184071_3184533_+	cd03675, Nudix_Hydrolase_2, Contains a crystal structure of the Nudix hydrolase from Nitrosomonas europaea, which has an unknown function	NA|369aa|down_5|NZ_CP038282.1_3184586_3185693_+	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|214aa|down_6|NZ_CP038282.1_3185728_3186370_+	PRK00218, PRK00218, lysogenization regulator HflD	NA|457aa|down_7|NZ_CP038282.1_3186373_3187744_+	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|224aa|down_8|NZ_CP038282.1_3187912_3188584_+	PRK10816, PRK10816, two-component system response regulator PhoP	NA|487aa|down_9|NZ_CP038282.1_3188583_3190044_+	PRK10815, PRK10815, two-component system sensor histidine kinase PhoQ
GCF_013167135.1_ASM1316713v1	NZ_CP038282	Escherichia coli O157:H7 strain F8492 chromosome, complete genome	7	4659864-4659998	6	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	Orphan	GGCCTACACGCTGCAATTTTGTAGGCCGGATAAGCAACGCGCATCCGGCA	50	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	NA|190aa|up_7|NZ_CP038282.1_4650252_4650822_-,NA|251aa|down_4|NZ_CP038282.1_4667294_4668047_-	NA|44aa|up_9|NZ_CP038282.1_4648145_4648277_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|553aa|up_8|NZ_CP038282.1_4648365_4650024_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|190aa|up_7|NZ_CP038282.1_4650252_4650822_-	NA	NA|328aa|up_6|NZ_CP038282.1_4651193_4652177_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|NZ_CP038282.1_4652152_4653763_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|NZ_CP038282.1_4653746_4654445_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|NZ_CP038282.1_4654531_4655296_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|NZ_CP038282.1_4655381_4656260_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|NZ_CP038282.1_4656598_4658299_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|NZ_CP038282.1_4658309_4659812_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|NZ_CP038282.1_4660011_4660707_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|785aa|down_1|NZ_CP038282.1_4660781_4663136_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|NZ_CP038282.1_4663299_4666206_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|NZ_CP038282.1_4666217_4666877_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|251aa|down_4|NZ_CP038282.1_4667294_4668047_-	NA	NA|272aa|down_5|NZ_CP038282.1_4668341_4669157_-	PRK09430, djlA, co-chaperone DjlA	NA|785aa|down_6|NZ_CP038282.1_4669411_4671766_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_7|NZ_CP038282.1_4671818_4673105_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_8|NZ_CP038282.1_4673104_4674094_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_9|NZ_CP038282.1_4674090_4674912_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
GCF_013167135.1_ASM1316713v1	NZ_CP038282	Escherichia coli O157:H7 strain F8492 chromosome, complete genome	8	4684768-4684904	3	PILER-CR	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	Orphan	TGAATCACCAATATTGAAAAT	21	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	NA,NA	NA|105aa|up_9|NZ_CP038282.1_4676143_4676458_-	pfam01845, CcdB, CcdB protein	NA|78aa|up_8|NZ_CP038282.1_4676460_4676694_-	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only]	NA|160aa|up_7|NZ_CP038282.1_4676779_4677259_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP038282.1_4677450_4679313_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP038282.1_4679305_4679836_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP038282.1_4679943_4681275_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP038282.1_4681332_4681620_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP038282.1_4681616_4682903_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP038282.1_4682953_4683895_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP038282.1_4683909_4684680_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP038282.1_4685153_4686668_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP038282.1_4686698_4687841_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP038282.1_4687969_4689187_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|262aa|down_3|NZ_CP038282.1_4690922_4691708_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_4|NZ_CP038282.1_4691713_4692304_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_5|NZ_CP038282.1_4692422_4692818_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_6|NZ_CP038282.1_4693078_4696300_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_7|NZ_CP038282.1_4696317_4697466_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_8|NZ_CP038282.1_4697921_4698743_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|305aa|down_9|NZ_CP038282.1_4698909_4699824_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional
GCF_013167135.1_ASM1316713v1	NZ_CP038282	Escherichia coli O157:H7 strain F8492 chromosome, complete genome	9	4889926-4890075	7	CRISPRCasFinder	no		cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,cas8e,cse2gr11,cas7,cas5,cas6e,cas2,DEDDh,DinG,PrimPol,c2c9_V-U4	NA,NA|579aa|down_6|NZ_CP038282.1_4897172_4898909_-	NA|190aa|up_9|NZ_CP038282.1_4877449_4878019_-	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|156aa|up_8|NZ_CP038282.1_4878211_4878679_+	COG4333, COG4333, Uncharacterized protein conserved in bacteria [Function unknown]	NA|111aa|up_7|NZ_CP038282.1_4879682_4880015_+	pfam07978, NIPSNAP, NIPSNAP	NA|126aa|up_6|NZ_CP038282.1_4880136_4880514_+	pfam13711, DUF4160, Domain of unknown function (DUF4160)	NA|650aa|up_5|NZ_CP038282.1_4880796_4882746_-	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|340aa|up_4|NZ_CP038282.1_4883116_4884136_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP038282.1_4884265_4885768_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP038282.1_4885928_4887011_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP038282.1_4887010_4888111_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP038282.1_4888377_4889889_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP038282.1_4890242_4890686_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP038282.1_4890685_4893541_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP038282.1_4893595_4894792_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP038282.1_4894984_4895488_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP038282.1_4895533_4895950_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP038282.1_4896111_4897116_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|579aa|down_6|NZ_CP038282.1_4897172_4898909_-	NA	NA|151aa|down_7|NZ_CP038282.1_4899031_4899484_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_8|NZ_CP038282.1_4899628_4900222_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|238aa|down_9|NZ_CP038282.1_4900292_4901006_+	PRK12742, PRK12742, SDR family oxidoreductase
