assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_013167755.1_ASM1316775v1	NZ_CP038369	Escherichia coli O157:H7 strain F6321 chromosome, complete genome	1	1091177-1091265	1	CRISPRCasFinder	no	cas3	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Unclear	GAGTTCCCCGCGCCAGCGGGGATAAACC	28	0	0	NA	NA	I-E	1	1	Unclear	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA,NA	NA|83aa|up_9|NZ_CP038369.1_1081653_1081902_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_8|NZ_CP038369.1_1081901_1082237_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_7|NZ_CP038369.1_1082307_1083099_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_6|NZ_CP038369.1_1083326_1084964_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_5|NZ_CP038369.1_1085051_1086350_+	PRK00077, eno, enolase; Provisional	NA|305aa|up_4|NZ_CP038369.1_1086409_1087324_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|383aa|up_3|NZ_CP038369.1_1087320_1088469_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|225aa|up_2|NZ_CP038369.1_1088702_1089377_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|207aa|up_1|NZ_CP038369.1_1089390_1090011_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|224aa|up_0|NZ_CP038369.1_1090165_1090837_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP038369.1_1091900_1093379_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP038369.1_1093405_1094683_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP038369.1_1095001_1095787_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP038369.1_1095856_1097311_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|260aa|down_4|NZ_CP038369.1_1098718_1099498_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|192aa|down_5|NZ_CP038369.1_1100502_1101078_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_6|NZ_CP038369.1_1101094_1101355_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_7|NZ_CP038369.1_1101345_1102617_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|121aa|down_8|NZ_CP038369.1_1102694_1103057_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_9|NZ_CP038369.1_1103375_1105175_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit
GCF_013167755.1_ASM1316775v1	NZ_CP038369	Escherichia coli O157:H7 strain F6321 chromosome, complete genome	2	1116957-1117169	1,1,2	PILER-CR,CRT,CRISPRCasFinder	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Type I-E	TGTGTTCCCCGCGCCAGCGGGGATAAACCG,TGTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	30,30,29	0	0	NA	NA	I-E:I-E:I-E	2,3,3	3	TypeI-E	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA,NA	NA|245aa|up_9|NZ_CP038369.1_1106960_1107695_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_8|NZ_CP038369.1_1107958_1108111_+	pfam01848, HOK_GEF, Hok/gef family	cas3|900aa|up_7|NZ_CP038369.1_1108302_1111002_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|521aa|up_6|NZ_CP038369.1_1111099_1112662_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_5|NZ_CP038369.1_1112658_1113195_+	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas7|352aa|up_4|NZ_CP038369.1_1113206_1114262_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_3|NZ_CP038369.1_1114272_1115019_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP038369.1_1115000_1115651_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP038369.1_1115647_1116571_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP038369.1_1116567_1116861_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP038369.1_1117250_1118288_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP038369.1_1118539_1119448_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP038369.1_1119449_1120877_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP038369.1_1120876_1121482_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP038369.1_1121531_1121855_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP038369.1_1122048_1122360_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP038369.1_1122378_1123089_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP038369.1_1123088_1123568_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP038369.1_1123564_1124614_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP038369.1_1124594_1125356_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_013167755.1_ASM1316775v1	NZ_CP038369	Escherichia coli O157:H7 strain F6321 chromosome, complete genome	3	1696417-1696522	3	CRISPRCasFinder	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Orphan	CCGAGCCGTAGGCCGGATTAGGCGTT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA|357aa|up_5|NZ_CP038369.1_1690396_1691467_-,NA	NA|420aa|up_9|NZ_CP038369.1_1684583_1685843_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_8|NZ_CP038369.1_1685832_1687461_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_7|NZ_CP038369.1_1687733_1689092_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_6|NZ_CP038369.1_1689096_1690173_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|357aa|up_5|NZ_CP038369.1_1690396_1691467_-	NA	NA|293aa|up_4|NZ_CP038369.1_1691930_1692809_-	cd05466, PBP2_LTTR_substrate, The substrate binding domain of LysR-type transcriptional regulators (LTTRs), a member of the type 2 periplasmic binding fold protein superfamily	NA|397aa|up_3|NZ_CP038369.1_1692960_1694151_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|217aa|up_2|NZ_CP038369.1_1694231_1694882_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP038369.1_1694935_1695190_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP038369.1_1695189_1696320_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP038369.1_1696546_1698832_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP038369.1_1699527_1703280_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP038369.1_1703420_1704143_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP038369.1_1704289_1706917_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|543aa|down_4|NZ_CP038369.1_1707124_1708753_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP038369.1_1708749_1709373_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1466aa|down_6|NZ_CP038369.1_1709516_1713914_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|265aa|down_7|NZ_CP038369.1_1713914_1714709_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|261aa|down_8|NZ_CP038369.1_1714781_1715564_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_9|NZ_CP038369.1_1715568_1716345_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_013167755.1_ASM1316775v1	NZ_CP038369	Escherichia coli O157:H7 strain F6321 chromosome, complete genome	4	2313248-2313397	4	CRISPRCasFinder	no	DEDDh	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Unclear	TACCAGAGATAGCGAACCGTAGGTCGGAAAAGGCGCTCGCGCCGCATCCGACA	53	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA|22aa|up_2|NZ_CP038369.1_2311335_2311401_+,NA	NA|273aa|up_9|NZ_CP038369.1_2305302_2306121_-	PRK10302, PRK10302, hypothetical protein; Provisional	NA|189aa|up_8|NZ_CP038369.1_2306117_2306684_-	PRK11440, PRK11440, putative hydrolase; Provisional	NA|591aa|up_7|NZ_CP038369.1_2306993_2308766_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|151aa|up_6|NZ_CP038369.1_2308883_2309336_+	PRK09438, nudB, dihydroneopterin triphosphate pyrophosphatase; Provisional	NA|247aa|up_5|NZ_CP038369.1_2309364_2310105_+	PRK00110, PRK00110, YebC/PmpR family DNA-binding transcriptional regulator	NA|174aa|up_4|NZ_CP038369.1_2310139_2310661_+	TIGR00228, Crossover_junction_endodeoxyribonuclease_RuvC, crossover junction endodeoxyribonuclease RuvC	NA|201aa|up_3|NZ_CP038369.1_2310662_2311265_-	PRK11470, PRK11470, YebB family permuted papain-like enzyme	NA|22aa|up_2|NZ_CP038369.1_2311335_2311401_+	NA	NA|204aa|up_1|NZ_CP038369.1_2311539_2312151_+	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|337aa|up_0|NZ_CP038369.1_2312159_2313170_+	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB	NA|262aa|down_0|NZ_CP038369.1_2313415_2314201_-	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB	NA|252aa|down_1|NZ_CP038369.1_2314197_2314953_-	PRK09544, znuC, high-affinity zinc transporter ATPase; Reviewed	NA|311aa|down_2|NZ_CP038369.1_2315031_2315964_+	PRK09545, znuA, zinc ABC transporter substrate-binding protein ZnuA	NA|441aa|down_3|NZ_CP038369.1_2315979_2317302_+	PRK11649, PRK11649, putative peptidase; Provisional	NA|324aa|down_4|NZ_CP038369.1_2317421_2318393_+	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	NA|481aa|down_5|NZ_CP038369.1_2318523_2319966_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|290aa|down_6|NZ_CP038369.1_2320093_2320963_-	PRK11302, PRK11302, DNA-binding transcriptional regulator HexR; Provisional	NA|492aa|down_7|NZ_CP038369.1_2321300_2322776_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|604aa|down_8|NZ_CP038369.1_2323010_2324822_+	PRK09054, PRK09054, phosphogluconate dehydratase; Validated	NA|214aa|down_9|NZ_CP038369.1_2324858_2325500_+	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
GCF_013167755.1_ASM1316775v1	NZ_CP038369	Escherichia coli O157:H7 strain F6321 chromosome, complete genome	5	2511883-2512006	5	CRISPRCasFinder	no	DEDDh	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA,NA|30aa|down_6|NZ_CP038369.1_2520903_2520993_+	NA|471aa|up_9|NZ_CP038369.1_2501336_2502749_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP038369.1_2503305_2503515_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP038369.1_2503970_2504597_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP038369.1_2504617_2506720_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP038369.1_2506732_2507371_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP038369.1_2507434_2508103_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP038369.1_2508099_2508885_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP038369.1_2508888_2509701_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP038369.1_2509712_2511317_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP038369.1_2511442_2511748_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP038369.1_2512320_2513577_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP038369.1_2513617_2514991_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP038369.1_2515205_2515847_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|404aa|down_3|NZ_CP038369.1_2517326_2518538_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_4|NZ_CP038369.1_2518650_2519583_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_5|NZ_CP038369.1_2519579_2520605_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_6|NZ_CP038369.1_2520903_2520993_+	NA	NA|390aa|down_7|NZ_CP038369.1_2521158_2522328_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_8|NZ_CP038369.1_2522473_2523055_-	PRK10543, PRK10543, superoxide dismutase [Fe]	NA|272aa|down_9|NZ_CP038369.1_2523182_2523998_-	pfam00877, NLPC_P60, NlpC/P60 family
GCF_013167755.1_ASM1316775v1	NZ_CP038369	Escherichia coli O157:H7 strain F6321 chromosome, complete genome	6	2867317-2867430	2	PILER-CR	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Orphan	TTTTTTTACCTGATTCGGGTAAA	23	1	1	2867387-2867411	NZ_CP038369.1_1837089-1837065	NA	2	2	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA|47aa|up_9|NZ_CP038369.1_2861776_2861917_-,NA|41aa|up_3|NZ_CP038369.1_2865266_2865389_-,NA|101aa|up_1|NZ_CP038369.1_2865853_2866156_-,NA|79aa|down_0|NZ_CP038369.1_2867778_2868015_+	NA|47aa|up_9|NZ_CP038369.1_2861776_2861917_-	NA	NA|121aa|up_8|NZ_CP038369.1_2861913_2862276_-	PRK09786, PRK09786, endodeoxyribonuclease RUS; Reviewed	NA|97aa|up_7|NZ_CP038369.1_2862272_2862563_-	pfam07102, DUF1364, Protein of unknown function (DUF1364)	NA|57aa|up_6|NZ_CP038369.1_2862555_2862726_-	PRK09689, PRK09689, prophage protein NinE; Provisional	NA|152aa|up_5|NZ_CP038369.1_2862725_2863181_-	PRK09741, PRK09741, hypothetical protein; Provisional	NA|509aa|up_4|NZ_CP038369.1_2863682_2865209_-	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain	NA|41aa|up_3|NZ_CP038369.1_2865266_2865389_-	NA	NA|111aa|up_2|NZ_CP038369.1_2865453_2865786_-	PRK09541, emrE, EmrE family multidrug efflux SMR transporter	NA|101aa|up_1|NZ_CP038369.1_2865853_2866156_-	NA	NA|234aa|up_0|NZ_CP038369.1_2866152_2866854_-	pfam06992, Phage_lambda_P, Replication protein P	NA|79aa|down_0|NZ_CP038369.1_2867778_2868015_+	NA	NA|381aa|down_1|NZ_CP038369.1_2868004_2869147_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|417aa|down_2|NZ_CP038369.1_2869260_2870511_-	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed	NA|218aa|down_3|NZ_CP038369.1_2870682_2871336_+	PRK11394, PRK11394, 23S rRNA pseudouridine(2457) synthase RluE	NA|154aa|down_4|NZ_CP038369.1_2871345_2871807_+	cd03675, Nudix_Hydrolase_2, Contains a crystal structure of the Nudix hydrolase from Nitrosomonas europaea, which has an unknown function	NA|369aa|down_5|NZ_CP038369.1_2871860_2872967_+	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed	NA|214aa|down_6|NZ_CP038369.1_2873002_2873644_+	PRK00218, PRK00218, lysogenization regulator HflD	NA|457aa|down_7|NZ_CP038369.1_2873647_2875018_+	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|224aa|down_8|NZ_CP038369.1_2875186_2875858_+	PRK10816, PRK10816, two-component system response regulator PhoP	NA|487aa|down_9|NZ_CP038369.1_2875857_2877318_+	PRK10815, PRK10815, two-component system sensor histidine kinase PhoQ
GCF_013167755.1_ASM1316775v1	NZ_CP038369	Escherichia coli O157:H7 strain F6321 chromosome, complete genome	7	2886468-2886673	3	PILER-CR	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Orphan	ATTCCCCACTCTCCCCACTTTTACTCCCCACTTTTT	36	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA|75aa|up_3|NZ_CP038369.1_2884860_2885085_-,NA|102aa|up_0|NZ_CP038369.1_2885915_2886221_-,NA|78aa|down_1|NZ_CP038369.1_2888370_2888604_-,NA|74aa|down_2|NZ_CP038369.1_2888605_2888827_-,NA|122aa|down_3|NZ_CP038369.1_2888819_2889185_-,NA|75aa|down_4|NZ_CP038369.1_2889177_2889402_-,NA|77aa|down_5|NZ_CP038369.1_2889391_2889622_-	NA|147aa|up_9|NZ_CP038369.1_2880518_2880959_-	COG1403, McrA, Restriction endonuclease [Defense mechanisms]	NA|99aa|up_8|NZ_CP038369.1_2880958_2881255_-	TIGR01560, phage-related_hypothetical_protein, uncharacterized phage protein (possible DNA packaging)	NA|113aa|up_7|NZ_CP038369.1_2881251_2881590_-	COG5614, COG5614, Bacteriophage head-tail adaptor [General function prediction only]	NA|404aa|up_6|NZ_CP038369.1_2881586_2882798_-	COG4695, COG4695, Phage-related protein [Function unknown]	NA|191aa|up_5|NZ_CP038369.1_2882799_2883372_-	COG3740, COG3740, Phage head maturation protease [General function prediction only]	NA|386aa|up_4|NZ_CP038369.1_2883411_2884569_-	COG4653, COG4653, Predicted phage phi-C31 gp36 major capsid-like protein [General function prediction only]	NA|75aa|up_3|NZ_CP038369.1_2884860_2885085_-	NA	NA|91aa|up_2|NZ_CP038369.1_2885210_2885483_-	pfam06069, PerC, PerC transcriptional activator	NA|137aa|up_1|NZ_CP038369.1_2885495_2885906_-	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB)	NA|102aa|up_0|NZ_CP038369.1_2885915_2886221_-	NA	NA|100aa|down_0|NZ_CP038369.1_2888065_2888365_-	pfam13973, DUF4222, Domain of unknown function (DUF4222)	NA|78aa|down_1|NZ_CP038369.1_2888370_2888604_-	NA	NA|74aa|down_2|NZ_CP038369.1_2888605_2888827_-	NA	NA|122aa|down_3|NZ_CP038369.1_2888819_2889185_-	NA	NA|75aa|down_4|NZ_CP038369.1_2889177_2889402_-	NA	NA|77aa|down_5|NZ_CP038369.1_2889391_2889622_-	NA	NA|426aa|down_6|NZ_CP038369.1_2889618_2890896_-	smart01040, Bro-N, BRO family, N-terminal domain	NA|63aa|down_7|NZ_CP038369.1_2890948_2891137_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|410aa|down_8|NZ_CP038369.1_2891502_2892732_-	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|374aa|down_9|NZ_CP038369.1_2892980_2894102_+	COG2850, COG2850, Uncharacterized conserved protein [Function unknown]
GCF_013167755.1_ASM1316775v1	NZ_CP038369	Escherichia coli O157:H7 strain F6321 chromosome, complete genome	8	4706739-4706873	6	CRISPRCasFinder	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Orphan	GGCCTACACGCTGCAATTTTGTAGGCCGGATAAGCAACGCGCATCCGGCA	50	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA|190aa|up_7|NZ_CP038369.1_4697127_4697697_-,NA	NA|44aa|up_9|NZ_CP038369.1_4695020_4695152_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|553aa|up_8|NZ_CP038369.1_4695240_4696899_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|190aa|up_7|NZ_CP038369.1_4697127_4697697_-	NA	NA|328aa|up_6|NZ_CP038369.1_4698068_4699052_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|NZ_CP038369.1_4699027_4700638_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|NZ_CP038369.1_4700621_4701320_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|NZ_CP038369.1_4701406_4702171_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|NZ_CP038369.1_4702256_4703135_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|NZ_CP038369.1_4703473_4705174_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|NZ_CP038369.1_4705184_4706687_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|NZ_CP038369.1_4706886_4707582_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|NZ_CP038369.1_4707656_4710008_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|NZ_CP038369.1_4710171_4713078_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|NZ_CP038369.1_4713089_4713749_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|261aa|down_4|NZ_CP038369.1_4714166_4714949_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|272aa|down_5|NZ_CP038369.1_4715243_4716059_-	PRK09430, djlA, co-chaperone DjlA	NA|785aa|down_6|NZ_CP038369.1_4716313_4718668_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_7|NZ_CP038369.1_4718720_4720007_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_8|NZ_CP038369.1_4720006_4720996_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_9|NZ_CP038369.1_4720992_4721814_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
GCF_013167755.1_ASM1316775v1	NZ_CP038369	Escherichia coli O157:H7 strain F6321 chromosome, complete genome	9	4936833-4936982	7	CRISPRCasFinder	no		cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	Orphan	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,c2c9_V-U4,DEDDh,DinG,PrimPol	NA,NA|573aa|down_6|NZ_CP038369.1_4944079_4945798_-	NA|156aa|up_9|NZ_CP038369.1_4923805_4924273_+	COG4333, COG4333, Uncharacterized protein conserved in bacteria [Function unknown]	NA|111aa|up_8|NZ_CP038369.1_4925276_4925609_+	pfam07978, NIPSNAP, NIPSNAP	NA|126aa|up_7|NZ_CP038369.1_4925730_4926108_+	pfam13711, DUF4160, Domain of unknown function (DUF4160)	NA|405aa|up_6|NZ_CP038369.1_4926290_4927504_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|650aa|up_5|NZ_CP038369.1_4927703_4929653_-	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain	NA|340aa|up_4|NZ_CP038369.1_4930023_4931043_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP038369.1_4931172_4932675_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP038369.1_4932835_4933918_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP038369.1_4933917_4935018_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP038369.1_4935284_4936796_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP038369.1_4937149_4937593_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP038369.1_4937592_4940448_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP038369.1_4940502_4941699_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP038369.1_4941891_4942395_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP038369.1_4942440_4942857_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP038369.1_4943018_4944023_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|573aa|down_6|NZ_CP038369.1_4944079_4945798_-	NA	NA|151aa|down_7|NZ_CP038369.1_4945920_4946373_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_8|NZ_CP038369.1_4946517_4947111_-	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|238aa|down_9|NZ_CP038369.1_4947181_4947895_+	PRK12742, PRK12742, SDR family oxidoreductase
